Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485955

Identifier: 103485955

GI number: 103485955

Start: 473876

End: 474244

Strand: Reverse

Name: 103485955

Synonym: Sala_0462

Alternate gene names: NA

Gene position: 474244-473876 (Counterclockwise)

Preceding gene: 103485958

Following gene: 103485953

Centisome position: 14.18

GC content: 67.48

Gene sequence:

>369_bases
ATGACGACTCCTCGCTTGCCCCTGCCGCGCCGCCACGAGCGCACCCGCGTCGCCATCGACGTCACCGTCAATGGCGTGCT
GAACTTTGTCGAAGGCCGCATCACCGACCTGTCGGAGGGCGGCGCGCGAATCGACGGCGCCTCGATGCCCGCGCGCTCGC
GCTGCGAAATCCATTATGGCGGGCAGGTCGTCTATGCCGTCGTAATGTGGTCGGAGGTCGACCGCATGGGCGTGCGCTTT
CCCTATGAGCTGACCCACGGCCCGCTCTACAACGCGCTCGATCGCGCACGCGTCGCGGCGTTGATCGACCCCGCGCAGAT
TTTCCACGGCCGACGCACCGTCACCTTCGGCCGCCGCGGGTTGAACTGA

Upstream 100 bases:

>100_bases
CCCATAGCGGCAAGCGCGACCGAATCGAAAGGCAAAATTGCCTCGTCGCGCGCGATCATCGTTACCGGATTATTTACCAT
GCCGGGCTTAGCATCGCCGC

Downstream 100 bases:

>100_bases
GGCGCGAGAATCGCGAGCATCAGATCGGCGCGCTACCAATCCCGTTCGTGTCGAGCGAAGTCGAGACACCCCTCGGAACG
GCACAGGATCGAGGGGCATC

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTTPRLPLPRRHERTRVAIDVTVNGVLNFVEGRITDLSEGGARIDGASMPARSRCEIHYGGQVVYAVVMWSEVDRMGVRF
PYELTHGPLYNALDRARVAALIDPAQIFHGRRTVTFGRRGLN

Sequences:

>Translated_122_residues
MTTPRLPLPRRHERTRVAIDVTVNGVLNFVEGRITDLSEGGARIDGASMPARSRCEIHYGGQVVYAVVMWSEVDRMGVRF
PYELTHGPLYNALDRARVAALIDPAQIFHGRRTVTFGRRGLN
>Mature_121_residues
TTPRLPLPRRHERTRVAIDVTVNGVLNFVEGRITDLSEGGARIDGASMPARSRCEIHYGGQVVYAVVMWSEVDRMGVRFP
YELTHGPLYNALDRARVAALIDPAQIFHGRRTVTFGRRGLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13674; Mature: 13543

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRLPLPRRHERTRVAIDVTVNGVLNFVEGRITDLSEGGARIDGASMPARSRCEIHYG
CCCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEC
GQVVYAVVMWSEVDRMGVRFPYELTHGPLYNALDRARVAALIDPAQIFHGRRTVTFGRRG
CEEEEEEEEHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCC
LN
CC
>Mature Secondary Structure 
TTPRLPLPRRHERTRVAIDVTVNGVLNFVEGRITDLSEGGARIDGASMPARSRCEIHYG
CCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEC
GQVVYAVVMWSEVDRMGVRFPYELTHGPLYNALDRARVAALIDPAQIFHGRRTVTFGRRG
CEEEEEEEEHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA