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The map label for this gene is groS [H]

Identifier: 103485946

GI number: 103485946

Start: 464759

End: 465046

Strand: Reverse

Name: groS [H]

Synonym: Sala_0453

Alternate gene names: 103485946

Gene position: 465046-464759 (Counterclockwise)

Preceding gene: 103485947

Following gene: 103485945

Centisome position: 13.9

GC content: 63.89

Gene sequence:

>288_bases
ATGCAATTTCGTCCGCTGCACGACCGCGTGCTCGTCCGCCGTATCGAAGCCGAGGAAAAGACGGCTGGCGGCATCATCAT
CCCCGACACCGCCAAGGAAAAGCCGCAGGAAGGCGAAGTCGTCTCGGTCGGCACCGGCGCCCGCGCCGACGATGGCAAGG
TGACGCCGCTCGACGTCAAGGCCGGCGACCGCATCCTGTTCGGCAAATGGTCGGGCACCGAAGTCAAGGTCGACGGCGAA
GAGCTGCTGATCATGAAGGAATCGGACATCCTCGGCGTCATCGCCTGA

Upstream 100 bases:

>100_bases
TGACTTGACGCTGTGACACCCCCCGCCCATATGCCCGCCTGTTAGCACTCTCCTGTGGCGAGTGCTAAGCGACATCCATT
GCACATCTGGAGGGATATCC

Downstream 100 bases:

>100_bases
GGACGGCCCGTCGTCGCCGCCCCGCCGGGACGGTGATTTCAAAGTAAAGTCACGCAGTTTTCTGCCATTTTCAAAGGAGC
ATCCACATGGCTGCCAAGGA

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MQFRPLHDRVLVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVSVGTGARADDGKVTPLDVKAGDRILFGKWSGTEVKVDGE
ELLIMKESDILGVIA

Sequences:

>Translated_95_residues
MQFRPLHDRVLVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVSVGTGARADDGKVTPLDVKAGDRILFGKWSGTEVKVDGE
ELLIMKESDILGVIA
>Mature_95_residues
MQFRPLHDRVLVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVSVGTGARADDGKVTPLDVKAGDRILFGKWSGTEVKVDGE
ELLIMKESDILGVIA

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=91, Percent_Identity=40.6593406593407, Blast_Score=69, Evalue=7e-13,
Organism=Homo sapiens, GI169210012, Length=91, Percent_Identity=38.4615384615385, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=50.5263157894737, Blast_Score=97, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=48.9130434782609, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324594, Length=93, Percent_Identity=41.9354838709677, Blast_Score=70, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356029, Length=90, Percent_Identity=46.6666666666667, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=44.4444444444444, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10298; Mature: 10298

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFRPLHDRVLVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVSVGTGARADDGKVTPLDVK
CCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
AGDRILFGKWSGTEVKVDGEELLIMKESDILGVIA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MQFRPLHDRVLVRRIEAEEKTAGGIIIPDTAKEKPQEGEVVSVGTGARADDGKVTPLDVK
CCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
AGDRILFGKWSGTEVKVDGEELLIMKESDILGVIA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA