Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485938

Identifier: 103485938

GI number: 103485938

Start: 456270

End: 456875

Strand: Reverse

Name: 103485938

Synonym: Sala_0445

Alternate gene names: NA

Gene position: 456875-456270 (Counterclockwise)

Preceding gene: 103485939

Following gene: 103485937

Centisome position: 13.66

GC content: 68.81

Gene sequence:

>606_bases
ATGGGCAGTGGCAACAGCGGTACGACGCGGCCTCGCCTTGCCGATCCCGACGACAGCGGCCCGGATATCCCCCCTCCCGT
CCGGTTCCCTGGCGCCGCGCCCATCATCGTCACAGCATCGATGGGCGCGGCAGATCAGCGCCGTTTCGACGCGCTCCGCG
CGGCCCATTTTCCACCCGAACGCAATCATCTCGCGGCGCATGTCACGCTGTTCCATCAACTACCGCCGTCGTGCCTCGAC
GAGCTTGCGCGCCTGCTCCGCAGGATCGCCGCCGACACGCCGCCGCCCGCTGCGATGCTGCGCGAGGTCTATTTGCTGGG
GCGGGGCGTCGCCTTCCGCATCGACAGCCCGGATCTCCTTGCGATTCGCGAACGCATCGCCGATCATTTTTGGGGGATGC
TCACCGCGCAGGACCGGGGGACGCCGCGGCTCCACATCACCGTCCAGAACAAGGCGACGACGGCGGCAGCACGCGCGCTG
CTCGCCGCGCTGGCCGCCGACTTCCGCCCGCGCTCGCTGACGATCGCCGGACTCGCGGCGTATCATTATCGCGGAGGCCC
CTGGGAATCGGCATTTGCCCTCTCTTTCCGGGGGGCACGCAGATGA

Upstream 100 bases:

>100_bases
CAATTTGATCGAGTGCAGCGATCAATCTGACGCATTTAATCGATTGGATCGCGGCGTCGTGATCGGACAGAAACATCGGC
ATCGGGAAAGGTCGTTCCCC

Downstream 100 bases:

>100_bases
TATTGACCGGCGCGACGAGCCTGCCTATAGGCGCGGCTCGCCCGAAATGGCGGCCCCATGGGGCGGAGTAGCTCAGCAGG
TTAGAGCAGCGGAATCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLD
ELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARAL
LAALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR

Sequences:

>Translated_201_residues
MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLD
ELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARAL
LAALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR
>Mature_200_residues
GSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPERNHLAAHVTLFHQLPPSCLDE
LARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLLAIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALL
AALAADFRPRSLTIAGLAAYHYRGGPWESAFALSFRGARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21796; Mature: 21665

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
RNHLAAHVTLFHQLPPSCLDELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLL
CCCHHHEEHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHH
AIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALLAALAADFRPRSLTIAGLAA
HHHHHHHHHHHCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
YHYRGGPWESAFALSFRGARR
HHCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
GSGNSGTTRPRLADPDDSGPDIPPPVRFPGAAPIIVTASMGAADQRRFDALRAAHFPPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
RNHLAAHVTLFHQLPPSCLDELARLLRRIAADTPPPAAMLREVYLLGRGVAFRIDSPDLL
CCCHHHEEHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHH
AIRERIADHFWGMLTAQDRGTPRLHITVQNKATTAAARALLAALAADFRPRSLTIAGLAA
HHHHHHHHHHHCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
YHYRGGPWESAFALSFRGARR
HHCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA