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The map label for this gene is omp16 [H]

Identifier: 103485822

GI number: 103485822

Start: 333192

End: 333704

Strand: Reverse

Name: omp16 [H]

Synonym: Sala_0327

Alternate gene names: 103485822

Gene position: 333704-333192 (Counterclockwise)

Preceding gene: 103485823

Following gene: 103485805

Centisome position: 9.98

GC content: 64.33

Gene sequence:

>513_bases
ATGACGATACGCAAAAGCACCGCGATGATCGCGGCGATCACCATGCTTGCTGTTGGCGCCTGCGCGAAAAAGGCCCCGGA
CACGCTGCCCCCCGCGCCCGAAGGCGCCGGGACCGACACGACAACCGACACCGGCACCGGCGTCGTTCCGGGATCGCAGG
AAGATTTCGTCGCCAATGTGGCATCGGACCGCATCTTCTTCGACTTCGACCAGTATAATGTCGATGCGCAGGATCAGGCG
ACGCTGCAAAGCCAGGCCCAGTGGCTGCAACGCAATCCCGCGGTCCGGGTCACGCTGGAAGGCCACGCCGACGAACGCGG
CACGCGCGACTATAATATCGCCCTCGGTGAACGCCGCGCCAACGCCGCGAAAAACTACCTCGCCTCGCTCGGCATCGATC
CGTCGCGGATCAATGTCATCAGCTATGGCAAGGAACGCCCCGCCGCGATCGGCTCGAACGAGGAAGCCTGGGCGCAGAAC
CGCCGCGCAGTGACCGTCGTCATCGGGCGATAA

Upstream 100 bases:

>100_bases
AGGAACCAAAAGGGCTCCATCGGGTTCCCCTATCGCGTCGCTACGCCGCGAAACCGCCCGTTGGAGAGAGTTTCTCCACA
ATAACAAGAGGACAGAAGAC

Downstream 100 bases:

>100_bases
GCGGCCACAGCGGCACCGCGGCAAAGGCGGCACCGCAAAGGAACATACCGAAGGGGACTCGCCGCTCGCCGAGCGGCTGG
TCCCCTTTTCGCTGGACGAC

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANVASDRIFFDFDQYNVDAQDQA
TLQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRANAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQN
RRAVTVVIGR

Sequences:

>Translated_170_residues
MTIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANVASDRIFFDFDQYNVDAQDQA
TLQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRANAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQN
RRAVTVVIGR
>Mature_169_residues
TIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANVASDRIFFDFDQYNVDAQDQAT
LQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRANAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQNR
RAVTVVIGR

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=163, Percent_Identity=39.2638036809816, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18236; Mature: 18105

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ASDRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHH
NAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQNRRAVTVVIGR
HHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECC
>Mature Secondary Structure 
TIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ASDRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHH
NAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQNRRAVTVVIGR
HHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]