| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485698
Identifier: 103485698
GI number: 103485698
Start: 217171
End: 217422
Strand: Direct
Name: 103485698
Synonym: Sala_0202
Alternate gene names: NA
Gene position: 217171-217422 (Clockwise)
Preceding gene: 103485697
Following gene: 103485699
Centisome position: 6.49
GC content: 71.43
Gene sequence:
>252_bases ATGTCGCACCGCCACCATATCCTTGCCACGCTCGCCGTTGCCGCGCTGCTCGGCGCGTGCGGGGCCAAGGAAGATCTGAA GCCGCCGGCGAACCAGCCGGCGCCCGTCGTTCCCATCGGCGCCGACCGCGCCCCGACCACACAGGAGCTCACGACGCCCG ACGCGCAGGCCCGGCCCGCGCGCAGCGACGAACTTCTCAAACGGTCCGAACAGCGCGAACCCGACGATTTCGACCTGCCG CCTCCGGGCTGA
Upstream 100 bases:
>100_bases CATCGGTCGCCAGCCGCATGAGCTATGGCGGGACCGCGCCCGAACGGGTAAGACAGGCCATCGCTGCGGCGCGCGCTGCC GCGGCCCAGGGACAGGATTG
Downstream 100 bases:
>100_bases GTCGAACCGAACTTATCTGATCCGTTCGTGTCGAGCGAAGTCGAGACACCCATCGGTGTAGCTCCGTTCCCAGGGGCATC TCGATCTTTCGACCGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSHRHHILATLAVAALLGACGAKEDLKPPANQPAPVVPIGADRAPTTQELTTPDAQARPARSDELLKRSEQREPDDFDLP PPG
Sequences:
>Translated_83_residues MSHRHHILATLAVAALLGACGAKEDLKPPANQPAPVVPIGADRAPTTQELTTPDAQARPARSDELLKRSEQREPDDFDLP PPG >Mature_82_residues SHRHHILATLAVAALLGACGAKEDLKPPANQPAPVVPIGADRAPTTQELTTPDAQARPARSDELLKRSEQREPDDFDLPP PG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8837; Mature: 8706
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRHHILATLAVAALLGACGAKEDLKPPANQPAPVVPIGADRAPTTQELTTPDAQARPA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC RSDELLKRSEQREPDDFDLPPPG CCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SHRHHILATLAVAALLGACGAKEDLKPPANQPAPVVPIGADRAPTTQELTTPDAQARPA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC RSDELLKRSEQREPDDFDLPPPG CCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA