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The map label for this gene is fdhD [H]

Identifier: 103485684

GI number: 103485684

Start: 198015

End: 198818

Strand: Reverse

Name: fdhD [H]

Synonym: Sala_0188

Alternate gene names: 103485684

Gene position: 198818-198015 (Counterclockwise)

Preceding gene: 103485685

Following gene: 103485683

Centisome position: 5.94

GC content: 71.89

Gene sequence:

>804_bases
ATGAACGACGCGGCGATCGACCTTCCTGTCCGGCGGTTGGGGCTCGGCGTGCCCGGCGATGTCGCGCTGGACCGCTGCGT
TGCGGTCGAGGCGCCGGTTTCAGTCGAGGTTGGCGGCATCGCCTATGCGGTGATGATGGCAACGCCTGCCGACCTTGAGG
ATTATGCCGTCGGCTTTGCGTTGAGCGAGGGGCTGATCGGGGCGTCCGCCGACATCCGGCGGACCGACGTGCAGCCGATC
GAGGGCGGCTGGGCGCTGCGGCTGTGGCTGACCACCGAGCGCAACGCCGCGGCGCTCGAACGGGCGCGGACGCGGGTGAG
CGAGAGCAGCTGCGGCCTGTGCGGGATCGCGAATATCGAGGAGGTGCTGCGCCCGCTGCCCCCGGTGACCGCGCACATCG
GGACCGACCGCATTGCCATCGCCGCCGCGCTGACGGCGCTCGATGCGCATCAGCCGCTCGGCCGCGCGACAGGCGCCGTC
CACGCCGCCGCCTTCTGCTCGCCCGCGGGGGCTATCCGGCTGGTGCGCGAGGATGTCGGGCGGCACAATGCGCTCGACAA
GCTGATCGGCGCACTCGCGCGGGCGGGGATCGACGCGGGCGAGGGCTTCATGCTGCTGTCGGCGCGGTGCAGCTATGAAC
TGGTCGAAAAGACGGTGCGCGCGGGATGTCCCATGCTCGTCACCATTTCGGCGCCGACGAGCCTGGCCGCGACGCGCGCC
GCGGCGGCGGGTCTGACGCTGGTGGCGCTGGCACGGCCCGACGCGGCGCTGGTCGTCGCGGACCCGCAGGGCATGATTGC
ATGA

Upstream 100 bases:

>100_bases
CGAGGAAGACAAGGCGCGGTTTGCAGCGACGCTGCGCGAACTGCAATAGGTCTTTCCGCTCGATGCCGCACTGTCGCGGC
GGATCGGTTAGGAAGCGGTG

Downstream 100 bases:

>100_bases
GGACGCTCGGCGCGATCCTCGCCGGCGGGGCGTCGCGCCGCTTCGGGTCGGACAAGGCGCTGGCGATGCTGGGTGGGCGC
ACGCTGCTCGATCATGTTCT

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNDAAIDLPVRRLGLGVPGDVALDRCVAVEAPVSVEVGGIAYAVMMATPADLEDYAVGFALSEGLIGASADIRRTDVQPI
EGGWALRLWLTTERNAAALERARTRVSESSCGLCGIANIEEVLRPLPPVTAHIGTDRIAIAAALTALDAHQPLGRATGAV
HAAAFCSPAGAIRLVREDVGRHNALDKLIGALARAGIDAGEGFMLLSARCSYELVEKTVRAGCPMLVTISAPTSLAATRA
AAAGLTLVALARPDAALVVADPQGMIA

Sequences:

>Translated_267_residues
MNDAAIDLPVRRLGLGVPGDVALDRCVAVEAPVSVEVGGIAYAVMMATPADLEDYAVGFALSEGLIGASADIRRTDVQPI
EGGWALRLWLTTERNAAALERARTRVSESSCGLCGIANIEEVLRPLPPVTAHIGTDRIAIAAALTALDAHQPLGRATGAV
HAAAFCSPAGAIRLVREDVGRHNALDKLIGALARAGIDAGEGFMLLSARCSYELVEKTVRAGCPMLVTISAPTSLAATRA
AAAGLTLVALARPDAALVVADPQGMIA
>Mature_267_residues
MNDAAIDLPVRRLGLGVPGDVALDRCVAVEAPVSVEVGGIAYAVMMATPADLEDYAVGFALSEGLIGASADIRRTDVQPI
EGGWALRLWLTTERNAAALERARTRVSESSCGLCGIANIEEVLRPLPPVTAHIGTDRIAIAAALTALDAHQPLGRATGAV
HAAAFCSPAGAIRLVREDVGRHNALDKLIGALARAGIDAGEGFMLLSARCSYELVEKTVRAGCPMLVTISAPTSLAATRA
AAAGLTLVALARPDAALVVADPQGMIA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=256, Percent_Identity=38.671875, Blast_Score=171, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 27429; Mature: 27429

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAAIDLPVRRLGLGVPGDVALDRCVAVEAPVSVEVGGIAYAVMMATPADLEDYAVGFA
CCCCEEECCHHHHCCCCCCHHHHHHHEEECCCCEEEECHHEEEEEECCCCCHHHHHHHHH
LSEGLIGASADIRRTDVQPIEGGWALRLWLTTERNAAALERARTRVSESSCGLCGIANIE
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCHH
EVLRPLPPVTAHIGTDRIAIAAALTALDAHQPLGRATGAVHAAAFCSPAGAIRLVREDVG
HHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
RHNALDKLIGALARAGIDAGEGFMLLSARCSYELVEKTVRAGCPMLVTISAPTSLAATRA
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHH
AAAGLTLVALARPDAALVVADPQGMIA
HHCCEEEEEEECCCEEEEEECCCCCCC
>Mature Secondary Structure
MNDAAIDLPVRRLGLGVPGDVALDRCVAVEAPVSVEVGGIAYAVMMATPADLEDYAVGFA
CCCCEEECCHHHHCCCCCCHHHHHHHEEECCCCEEEECHHEEEEEECCCCCHHHHHHHHH
LSEGLIGASADIRRTDVQPIEGGWALRLWLTTERNAAALERARTRVSESSCGLCGIANIE
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCHH
EVLRPLPPVTAHIGTDRIAIAAALTALDAHQPLGRATGAVHAAAFCSPAGAIRLVREDVG
HHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
RHNALDKLIGALARAGIDAGEGFMLLSARCSYELVEKTVRAGCPMLVTISAPTSLAATRA
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHH
AAAGLTLVALARPDAALVVADPQGMIA
HHCCEEEEEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]