Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485671

Identifier: 103485671

GI number: 103485671

Start: 179598

End: 179909

Strand: Direct

Name: 103485671

Synonym: Sala_0175

Alternate gene names: NA

Gene position: 179598-179909 (Clockwise)

Preceding gene: 103485670

Following gene: 103485672

Centisome position: 5.37

GC content: 69.23

Gene sequence:

>312_bases
ATGAATCGCGCCTTGCCGCCGGCCGCCGCGCTGGTACTCCTTCTGTCGGCCTGCGCGACGCCCGAGGCGCGGCTGCGCAC
CGGGCTCAACAACGCCGGGCTGTCGAAAGCGATGTCGGCGTGCATGGCCGAACGCATGGTTGACCGGCTGTCGCTGCTCC
AGCTTCGTCGCCTCGCCGCGCTCGGCAGCCTCAAGGACAAGCGTGTCGCCGACCTGTCGCTGGCGCAGTTTCTGCACAAG
GTGCGCGCGCTCAAGGATCCGGAGATATTGGCGGTGTCGACCAGCTCGGCGGCGGTGTGCGCGCTGCGGTGA

Upstream 100 bases:

>100_bases
GTCCTGCTCGGCGACACGAGCGCCCCGGTGCCCGCGCGCATGGAACTGATGCAGGCGGTGTCGAGCGCCGTCGCGGCCTA
TCACGGAAAATGACATCCCC

Downstream 100 bases:

>100_bases
CGCCATAGGGTCCTGGCCCTAGGCCGAGCTTTCGCCCGTCCAAGATAAACTGGGCGCGGCAGGGGTAGCCTTGCCGCGCA
ACTTGGCTTATGCGGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNRALPPAAALVLLLSACATPEARLRTGLNNAGLSKAMSACMAERMVDRLSLLQLRRLAALGSLKDKRVADLSLAQFLHK
VRALKDPEILAVSTSSAAVCALR

Sequences:

>Translated_103_residues
MNRALPPAAALVLLLSACATPEARLRTGLNNAGLSKAMSACMAERMVDRLSLLQLRRLAALGSLKDKRVADLSLAQFLHK
VRALKDPEILAVSTSSAAVCALR
>Mature_103_residues
MNRALPPAAALVLLLSACATPEARLRTGLNNAGLSKAMSACMAERMVDRLSLLQLRRLAALGSLKDKRVADLSLAQFLHK
VRALKDPEILAVSTSSAAVCALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10938; Mature: 10938

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRALPPAAALVLLLSACATPEARLRTGLNNAGLSKAMSACMAERMVDRLSLLQLRRLAA
CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSLKDKRVADLSLAQFLHKVRALKDPEILAVSTSSAAVCALR
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
>Mature Secondary Structure
MNRALPPAAALVLLLSACATPEARLRTGLNNAGLSKAMSACMAERMVDRLSLLQLRRLAA
CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSLKDKRVADLSLAQFLHKVRALKDPEILAVSTSSAAVCALR
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA