Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485666

Identifier: 103485666

GI number: 103485666

Start: 173440

End: 173970

Strand: Direct

Name: 103485666

Synonym: Sala_0170

Alternate gene names: NA

Gene position: 173440-173970 (Clockwise)

Preceding gene: 103485664

Following gene: 103485667

Centisome position: 5.18

GC content: 63.84

Gene sequence:

>531_bases
ATGCAGCTATCGCGTTTCGCCATTCCGACCTTGCTCATCGCCTTCGCTCTCGCCGCGCCGACTGCGGCCAGAGACAAGGA
ACCGTCCGTAGCGCCAGCGCAGATCCGCGAACTATATGCCTGCCGCGATATCGGCGACGCGGCTCAGCGGCTCGCCTGCT
TCGACCGCGAGGTCGGCGAGCTCGCCGCGGCGGATGCGGCGCGCGAGATCACCTTCACCGACCGCGAAACGGCGCGCAAG
GCGCGGCGCGGCCTCTTCGGTTTTTCGTTTCCCAAACTCGGCGGCATATTCGGTGGGGACGAGGATGAGATCAAGGAAAT
TGAAACGACAATCCGCGCGGTCAGCATGAACCGGTCGGGCCTGTATACGCTGATCATGGAGGACGATGCGGTGTGGACGC
AGATCGACACTACCCGGCTGCCGCGCCAACCCAAGCCAGGGCAGAAGGTGAAGATCAAGACAGCGACCATGGGCAGCTAT
TTTGCGACGATCGACGGCGGGCGCACGATCCGCATGAAGCGCGACCGCTGA

Upstream 100 bases:

>100_bases
TACACTAAGGTCTGCAAGGCGCGATTGGCAACCGGGCTTGCTTGCCGTGCGCCGCCGGGGCGGCTAGTCAGCGCATATCG
TCTTCGCCAGGGGGCTCGTC

Downstream 100 bases:

>100_bases
TTGCAGCCGGAAGGGGCACGATGCACGCAGGACGGCATGGCGGACAGGATTCCCGTTCGGGGGCCGAATAGCCCCCCCTT
CGTGCTGCTCGACGATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MQLSRFAIPTLLIAFALAAPTAARDKEPSVAPAQIRELYACRDIGDAAQRLACFDREVGELAAADAAREITFTDRETARK
ARRGLFGFSFPKLGGIFGGDEDEIKEIETTIRAVSMNRSGLYTLIMEDDAVWTQIDTTRLPRQPKPGQKVKIKTATMGSY
FATIDGGRTIRMKRDR

Sequences:

>Translated_176_residues
MQLSRFAIPTLLIAFALAAPTAARDKEPSVAPAQIRELYACRDIGDAAQRLACFDREVGELAAADAAREITFTDRETARK
ARRGLFGFSFPKLGGIFGGDEDEIKEIETTIRAVSMNRSGLYTLIMEDDAVWTQIDTTRLPRQPKPGQKVKIKTATMGSY
FATIDGGRTIRMKRDR
>Mature_176_residues
MQLSRFAIPTLLIAFALAAPTAARDKEPSVAPAQIRELYACRDIGDAAQRLACFDREVGELAAADAAREITFTDRETARK
ARRGLFGFSFPKLGGIFGGDEDEIKEIETTIRAVSMNRSGLYTLIMEDDAVWTQIDTTRLPRQPKPGQKVKIKTATMGSY
FATIDGGRTIRMKRDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19503; Mature: 19503

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSRFAIPTLLIAFALAAPTAARDKEPSVAPAQIRELYACRDIGDAAQRLACFDREVGE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAADAAREITFTDRETARKARRGLFGFSFPKLGGIFGGDEDEIKEIETTIRAVSMNRSG
HHHHHHHHEEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
LYTLIMEDDAVWTQIDTTRLPRQPKPGQKVKIKTATMGSYFATIDGGRTIRMKRDR
EEEEEEECCCEEEEECHHCCCCCCCCCCEEEEEEEECCCEEEEECCCEEEEEECCC
>Mature Secondary Structure
MQLSRFAIPTLLIAFALAAPTAARDKEPSVAPAQIRELYACRDIGDAAQRLACFDREVGE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAADAAREITFTDRETARKARRGLFGFSFPKLGGIFGGDEDEIKEIETTIRAVSMNRSG
HHHHHHHHEEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
LYTLIMEDDAVWTQIDTTRLPRQPKPGQKVKIKTATMGSYFATIDGGRTIRMKRDR
EEEEEEECCCEEEEECHHCCCCCCCCCCEEEEEEEECCCEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA