Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is amn [H]

Identifier: 103485663

GI number: 103485663

Start: 167576

End: 169057

Strand: Direct

Name: amn [H]

Synonym: Sala_0167

Alternate gene names: 103485663

Gene position: 167576-169057 (Clockwise)

Preceding gene: 103485662

Following gene: 103485664

Centisome position: 5.01

GC content: 66.26

Gene sequence:

>1482_bases
ATGACATCCAGATCATCGCAAGAATCCACCGATCCCGCAGCGCGCATCGACGCCATCATCGCCGAGCTTCAGGACAAGTT
CCGCGCGTCGGTTTCCAACCTCAAATCCGCCATCGCCGCCTATGTGCGCGACCGCCGCCTGCCGCCCGCCGATGCCGCGG
CGACCGGCCTTTTCGACTATCCGGCGATCCGCCTGACGACGACGGGCGAACAGCGCGAAGGGCAGGCGGGGCACAATCTG
TCATTTGGCCGTTTCGAGCGCGCGGGCACGTTTGAAACCACGGTGACGCGCCCCGACCTGTTCGCCGACTATCTGCGCGA
ACAATTGCTCCTGCTCGCGCGCCATTACGACGTCGAGATCGAAGTGACCCGCACGGGGCAGCAGATTCCCTTCCCCTATG
TGCTCGACGCCAGCGACGGGTCGGACATGGGCGGGGTCACCCCGCTCGAACTCGCGCGCCATTTCCCGACCACCGAACTT
GCGGACATCGGCGACGAGCTGGCCGACGGGCTGTTCGGGCTTGATCCCACCGAGCCGCAGCCGCTCGCGTTGTTCGACGC
CCTTCGCACCGATTTCAGCCTCGCGCGCCTCCGTCACTACACCGGTACCGCGCCCGAGCATTTCCAGCGCTATATCCTGT
TCACCAACTATCACCGCTATGTCGACGAATTCGTCGCCTGGGCGGGGGCGCAGGTGGGGCGGGGGCGCTACACCGCGCTC
GCGGGCGCGGCAGGCCTCTATGTCGACCAGCCGGGCGTCAACGCCAGCGCGCTCGTCGCCGACAGCGCCTGGCGGCGGCA
CCAGATGCCCGCCTATCACCTCATCGCTCCCGATGGCGGCGGCATCACCCTCGTCAACATCGGCGTCGGCCCGTCGAACG
CCAAGACGATCTGCGACCATCTCGCGGTGCTGCGTCCCGAGGCGTGGCTGATGATCGGGCATTGCGGCGGGCTCCGCCCC
AGCCAGCGTATCGGCGACTATGTGCTCGCGCACGCATATCTCCGCGACGACCACATCCTCGACGGCGTGCTGCCGCCCGA
AATCCCCATTCCGCCGATCGCCGAAGTGCAACAGGCATTGGCAAGCGCCGCCGAAAGCGTGTCGGGGACCAGCGGCGCCG
ACCTCAAGAAGCGGATGCGCACCGGCACGGTCGTCACCACCGATGATCGCAACTGGGAGCTGCGTTACACCGACTCGGCG
CTGCGTTTTTCGCAATCGCGCGCGATCGGCATCGACATGGAATCGGCAACGATCGCCGCGCAAGGCTATCGTTTCCGCGT
GCCGTACGGTACGCTGCTTTGCGTGAGTGACAAGCCGCTTCACGGCGAACTCAAGCTGCCCGGACAGGCGAACCGCTTTT
ACGAAGAGGCAATCGCCGCGCACCTCCAGATCGGCATCCGCGCGTGCGAGACGATGCGCGACGAGGGCGCCAAGCTGCAC
AGCCGCAAATTGCGCGCGTTCAACGAGCCGCCGTTCCGTTGA

Upstream 100 bases:

>100_bases
CGCAAGGGGAGGGGCCGCGTCTCGCCGCCCTTCCCTGAAGGCGAGGGCGGCGACGATCGCCCCCTTTCCTTTTGTCACAA
TTTCGTGCAACAGCGTCGCG

Downstream 100 bases:

>100_bases
GGTCAACCTCGCGTTAACCATAAAGCAAGGCCGGTATCGTAATTTCACATGCGCTGCCGCTTTTCCCTTGCGGTGCGGCG
ACGGCATCGCCACGTTGCAT

Product: AMP nucleosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTSRSSQESTDPAARIDAIIAELQDKFRASVSNLKSAIAAYVRDRRLPPADAAATGLFDYPAIRLTTTGEQREGQAGHNL
SFGRFERAGTFETTVTRPDLFADYLREQLLLLARHYDVEIEVTRTGQQIPFPYVLDASDGSDMGGVTPLELARHFPTTEL
ADIGDELADGLFGLDPTEPQPLALFDALRTDFSLARLRHYTGTAPEHFQRYILFTNYHRYVDEFVAWAGAQVGRGRYTAL
AGAAGLYVDQPGVNASALVADSAWRRHQMPAYHLIAPDGGGITLVNIGVGPSNAKTICDHLAVLRPEAWLMIGHCGGLRP
SQRIGDYVLAHAYLRDDHILDGVLPPEIPIPPIAEVQQALASAAESVSGTSGADLKKRMRTGTVVTTDDRNWELRYTDSA
LRFSQSRAIGIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGELKLPGQANRFYEEAIAAHLQIGIRACETMRDEGAKLH
SRKLRAFNEPPFR

Sequences:

>Translated_493_residues
MTSRSSQESTDPAARIDAIIAELQDKFRASVSNLKSAIAAYVRDRRLPPADAAATGLFDYPAIRLTTTGEQREGQAGHNL
SFGRFERAGTFETTVTRPDLFADYLREQLLLLARHYDVEIEVTRTGQQIPFPYVLDASDGSDMGGVTPLELARHFPTTEL
ADIGDELADGLFGLDPTEPQPLALFDALRTDFSLARLRHYTGTAPEHFQRYILFTNYHRYVDEFVAWAGAQVGRGRYTAL
AGAAGLYVDQPGVNASALVADSAWRRHQMPAYHLIAPDGGGITLVNIGVGPSNAKTICDHLAVLRPEAWLMIGHCGGLRP
SQRIGDYVLAHAYLRDDHILDGVLPPEIPIPPIAEVQQALASAAESVSGTSGADLKKRMRTGTVVTTDDRNWELRYTDSA
LRFSQSRAIGIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGELKLPGQANRFYEEAIAAHLQIGIRACETMRDEGAKLH
SRKLRAFNEPPFR
>Mature_492_residues
TSRSSQESTDPAARIDAIIAELQDKFRASVSNLKSAIAAYVRDRRLPPADAAATGLFDYPAIRLTTTGEQREGQAGHNLS
FGRFERAGTFETTVTRPDLFADYLREQLLLLARHYDVEIEVTRTGQQIPFPYVLDASDGSDMGGVTPLELARHFPTTELA
DIGDELADGLFGLDPTEPQPLALFDALRTDFSLARLRHYTGTAPEHFQRYILFTNYHRYVDEFVAWAGAQVGRGRYTALA
GAAGLYVDQPGVNASALVADSAWRRHQMPAYHLIAPDGGGITLVNIGVGPSNAKTICDHLAVLRPEAWLMIGHCGGLRPS
QRIGDYVLAHAYLRDDHILDGVLPPEIPIPPIAEVQQALASAAESVSGTSGADLKKRMRTGTVVTTDDRNWELRYTDSAL
RFSQSRAIGIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGELKLPGQANRFYEEAIAAHLQIGIRACETMRDEGAKLHS
RKLRAFNEPPFR

Specific function: Involved in regulation of AMP concentrations [H]

COG id: COG0775

COG function: function code F; Nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788293, Length=488, Percent_Identity=61.8852459016393, Blast_Score=586, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011271
- InterPro:   IPR018953
- InterPro:   IPR018017
- InterPro:   IPR000845 [H]

Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]

EC number: =3.2.2.4 [H]

Molecular weight: Translated: 54172; Mature: 54040

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRSSQESTDPAARIDAIIAELQDKFRASVSNLKSAIAAYVRDRRLPPADAAATGLFDY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
PAIRLTTTGEQREGQAGHNLSFGRFERAGTFETTVTRPDLFADYLREQLLLLARHYDVEI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCEEE
EVTRTGQQIPFPYVLDASDGSDMGGVTPLELARHFPTTELADIGDELADGLFGLDPTEPQ
EEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
PLALFDALRTDFSLARLRHYTGTAPEHFQRYILFTNYHRYVDEFVAWAGAQVGRGRYTAL
CHHHHHHHHCCHHHHHHHHHCCCCHHHHHEEHEEHHHHHHHHHHHHHHCCCCCCCCEEEH
AGAAGLYVDQPGVNASALVADSAWRRHQMPAYHLIAPDGGGITLVNIGVGPSNAKTICDH
HCCCCEEEECCCCCHHHEEHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHH
LAVLRPEAWLMIGHCGGLRPSQRIGDYVLAHAYLRDDHILDGVLPPEIPIPPIAEVQQAL
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ASAAESVSGTSGADLKKRMRTGTVVTTDDRNWELRYTDSALRFSQSRAIGIDMESATIAA
HHHHHHCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCHHHHHCCCCEEEEECCCCEEEE
QGYRFRVPYGTLLCVSDKPLHGELKLPGQANRFYEEAIAAHLQIGIRACETMRDEGAKLH
CCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SRKLRAFNEPPFR
HHHHHHCCCCCCC
>Mature Secondary Structure 
TSRSSQESTDPAARIDAIIAELQDKFRASVSNLKSAIAAYVRDRRLPPADAAATGLFDY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
PAIRLTTTGEQREGQAGHNLSFGRFERAGTFETTVTRPDLFADYLREQLLLLARHYDVEI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCEEE
EVTRTGQQIPFPYVLDASDGSDMGGVTPLELARHFPTTELADIGDELADGLFGLDPTEPQ
EEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
PLALFDALRTDFSLARLRHYTGTAPEHFQRYILFTNYHRYVDEFVAWAGAQVGRGRYTAL
CHHHHHHHHCCHHHHHHHHHCCCCHHHHHEEHEEHHHHHHHHHHHHHHCCCCCCCCEEEH
AGAAGLYVDQPGVNASALVADSAWRRHQMPAYHLIAPDGGGITLVNIGVGPSNAKTICDH
HCCCCEEEECCCCCHHHEEHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHH
LAVLRPEAWLMIGHCGGLRPSQRIGDYVLAHAYLRDDHILDGVLPPEIPIPPIAEVQQAL
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ASAAESVSGTSGADLKKRMRTGTVVTTDDRNWELRYTDSALRFSQSRAIGIDMESATIAA
HHHHHHCCCCCCHHHHHHHHCCCEEEECCCCEEEEECCHHHHHCCCCEEEEECCCCEEEE
QGYRFRVPYGTLLCVSDKPLHGELKLPGQANRFYEEAIAAHLQIGIRACETMRDEGAKLH
CCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SRKLRAFNEPPFR
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]