Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485662

Identifier: 103485662

GI number: 103485662

Start: 166953

End: 167456

Strand: Direct

Name: 103485662

Synonym: Sala_0166

Alternate gene names: NA

Gene position: 166953-167456 (Clockwise)

Preceding gene: 103485660

Following gene: 103485663

Centisome position: 4.99

GC content: 61.11

Gene sequence:

>504_bases
TTGAGCGAAAAGGATGCCAAGATGACGATCCAACCCGGCGACAAGCTGCCCGACGCGACCTTCGTAAAGGTGACCGAAAA
TGGTCCCGAACAGGTCAGCGCCGCCGATTATTTCAAGGGCCGCAGGGTCGCGCTCTTTTCGGTTCCCGGCGCTTTCACGC
CGACCTGCTCGGCCAAGCATCTGCCCGGCTTTGTCGAAAAAGCCGACGCCTTGAAGGCCAAGGGTGTCGATGAAATCGCC
TGCACCGCGGTCAACGACGCCTTTGTCATGGGCGCATGGAGCAAGAGCGCCAACGCCGGCGATGCGGTCACGATGCTCGC
CGACGGCAATGGCGCCTTTGCCGAAGCGGTGGGCCTCACCATGGACGGCACTGCTTTCGGCATGGGCAAGCGCGGCCAGC
GTTTCTCGATGATCATCAACGACGGCGTCGTCGAACAGCTGAATGTCGAAGCGCCGGGCGAGTTCAAGGTGTCGAGCGCC
GATCATATGCTGGAACAGCTGTAA

Upstream 100 bases:

>100_bases
CCGGTCGCAAGCGGTCAATTCGTCCAAACTCCCACCCTCCCTCTTCGCCATCCTTGACTCGCGTCCCCGGCGCCCCAATG
TCTCGCCGACCCGAATCCCC

Downstream 100 bases:

>100_bases
GCAAAGCTCCGCCCCTTCCCGCAAGGGGAGGGGCCGCGTCTCGCCGCCCTTCCCTGAAGGCGAGGGCGGCGACGATCGCC
CCCTTTCCTTTTGTCACAAT

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSEKDAKMTIQPGDKLPDATFVKVTENGPEQVSAADYFKGRRVALFSVPGAFTPTCSAKHLPGFVEKADALKAKGVDEIA
CTAVNDAFVMGAWSKSANAGDAVTMLADGNGAFAEAVGLTMDGTAFGMGKRGQRFSMIINDGVVEQLNVEAPGEFKVSSA
DHMLEQL

Sequences:

>Translated_167_residues
MSEKDAKMTIQPGDKLPDATFVKVTENGPEQVSAADYFKGRRVALFSVPGAFTPTCSAKHLPGFVEKADALKAKGVDEIA
CTAVNDAFVMGAWSKSANAGDAVTMLADGNGAFAEAVGLTMDGTAFGMGKRGQRFSMIINDGVVEQLNVEAPGEFKVSSA
DHMLEQL
>Mature_166_residues
SEKDAKMTIQPGDKLPDATFVKVTENGPEQVSAADYFKGRRVALFSVPGAFTPTCSAKHLPGFVEKADALKAKGVDEIAC
TAVNDAFVMGAWSKSANAGDAVTMLADGNGAFAEAVGLTMDGTAFGMGKRGQRFSMIINDGVVEQLNVEAPGEFKVSSAD
HMLEQL

Specific function: Unknown

COG id: COG0678

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI6912238, Length=162, Percent_Identity=46.9135802469136, Blast_Score=137, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6323138, Length=135, Percent_Identity=31.1111111111111, Blast_Score=68, Evalue=7e-13,
Organism=Drosophila melanogaster, GI78706776, Length=155, Percent_Identity=45.1612903225806, Blast_Score=129, Evalue=7e-31,
Organism=Drosophila melanogaster, GI78709078, Length=155, Percent_Identity=45.1612903225806, Blast_Score=129, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011767
- InterPro:   IPR002109
- InterPro:   IPR011906
- InterPro:   IPR014025
- InterPro:   IPR013740
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17537; Mature: 17406

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKDAKMTIQPGDKLPDATFVKVTENGPEQVSAADYFKGRRVALFSVPGAFTPTCSAKH
CCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCC
LPGFVEKADALKAKGVDEIACTAVNDAFVMGAWSKSANAGDAVTMLADGNGAFAEAVGLT
CCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCCEEHEECEE
MDGTAFGMGKRGQRFSMIINDGVVEQLNVEAPGEFKVSSADHMLEQL
ECCCEECCCCCCCEEEEEECCCCEEEECCCCCCCEEECCHHHHHHHC
>Mature Secondary Structure 
SEKDAKMTIQPGDKLPDATFVKVTENGPEQVSAADYFKGRRVALFSVPGAFTPTCSAKH
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCC
LPGFVEKADALKAKGVDEIACTAVNDAFVMGAWSKSANAGDAVTMLADGNGAFAEAVGLT
CCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCCEEHEECEE
MDGTAFGMGKRGQRFSMIINDGVVEQLNVEAPGEFKVSSADHMLEQL
ECCCEECCCCCCCEEEEEECCCCEEEECCCCCCCEEECCHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]