| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485614
Identifier: 103485614
GI number: 103485614
Start: 115024
End: 116043
Strand: Direct
Name: 103485614
Synonym: Sala_0118
Alternate gene names: NA
Gene position: 115024-116043 (Clockwise)
Preceding gene: 103485613
Following gene: 103485615
Centisome position: 3.44
GC content: 62.55
Gene sequence:
>1020_bases ATGATGATCAAAAAGCCATTCACTATTCTCCCTCTCGCCCTGGCGCTGCTTGGCCCGATATCCTCTTCTCCCGGTTTAGC GGCTCCGACGCCCGCCGCGGTGCCCGACACCATAGCCGGGACCGTCCGCCAGACCGCTCCCGCAATTTATCGATTTACGA TTGGCGATGCCCAGATAACGGCATTGTCGGATGGGTCGGTCCCGCTGGACCTGCACCAGTTGCTGCGCGGCGTCTCGGCG CAAACGATCGACGAAATTCTTGCCCGCAGTTTCCTAGCCAATCCCGCAGAGGCTTCGATCAACGCTTATCTGATCGACTT CAACGGGCGGCGGATCCTTGTCGATGTCGGTGCCGGCGATCTTTTCGGCCTAGGCAACGGCGGCAGGCTGCTCGAAGCGC TGGCAGCAGCTGGGGCCGCGCCGGAGACAATCACCGACATACTCATCACCCATGTCCACAGCGACCATAGCGGCGGTCTC ACGAAGGCGGGCAAGATCGTCTTCCCGCGCGCGACGGTCTATGCCGGCGGTGCAGATATTCGCTTTTTCTCCGATGTTGC CAACGCGGCTAAAAGCGGGATCGACAAGCGCTTCTGGACCCAGACCGAGCAGACGCTGACGCCCTATGTCACGGCCGGCC GGGTGAAGCCGATCGATACCGATGGCGAAGTCGTGCCGGGCATTCGTGCCGAACTGCAGCCTGGGCACACCCCGGGCACC GCCTTCTACACCTTGACCAGCAAGGGGCAGAGTATCGTCTTCGTCGGCGATGTCATCCACGCCGGCGCGGTTCAATTTCC ACGCCCCGACGTGACGATCACTTTCGATGTTCGCCAGGACGAGGCGCGCGCCGTGCGGAAAGCCGCGTTCACCCGCTTCG CTCGCGACCGTATGATGATTGCGGCGCCCCATCTTCCGTTCCCGGGGGTGGGTCACATTGCCGCCGACGGATCCGGCTAC CGCTGGTACCCCATCGAACAGACGGATCGCGAGCCCATGAAGGAGAGGCTCAAGCTCTGA
Upstream 100 bases:
>100_bases AGCACGCTGTCGATCGCGACAATGTCTCGCAAGACCCCGCCAGCGCTGGGATAATGACTGACAGTTCTTCATCCATCGCA ACTCAATCAAGGACGTCGCC
Downstream 100 bases:
>100_bases AGCTCGCATCGCCTCTTGCATTCTCCAGCCGCTGCGCTATTTATATGCGCGACGCATATAAACTGGAATGCGATTGACCA AGGACGCTTCACCTTCCGAT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase-Like; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metal Dependent Hydrolase; Metallo-Beta-Lactamase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Metallo-Beta-Lactamase Superfamily; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY RWYPIEQTDREPMKERLKL
Sequences:
>Translated_339_residues MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY RWYPIEQTDREPMKERLKL >Mature_339_residues MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY RWYPIEQTDREPMKERLKL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36102; Mature: 36102
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQIT CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEE ALSDGSVPLDLHQLLRGVSAQTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGD EECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCC LFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGLTKAGKIVFPRATVYAGGADI EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCE RFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT EHHHHHHHHHHHCCCHHHHCCCHHHCCCEEECCEEEECCCCCCCCCCCHHCCCCCCCCCC AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMI EEEEEECCCCEEEEEECCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEE AAPHLPFPGVGHIAADGSGYRWYPIEQTDREPMKERLKL EECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQIT CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEE ALSDGSVPLDLHQLLRGVSAQTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGD EECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCC LFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGLTKAGKIVFPRATVYAGGADI EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCE RFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT EHHHHHHHHHHHCCCHHHHCCCHHHCCCEEECCEEEECCCCCCCCCCCHHCCCCCCCCCC AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMI EEEEEECCCCEEEEEECCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEE AAPHLPFPGVGHIAADGSGYRWYPIEQTDREPMKERLKL EECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA