Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485614

Identifier: 103485614

GI number: 103485614

Start: 115024

End: 116043

Strand: Direct

Name: 103485614

Synonym: Sala_0118

Alternate gene names: NA

Gene position: 115024-116043 (Clockwise)

Preceding gene: 103485613

Following gene: 103485615

Centisome position: 3.44

GC content: 62.55

Gene sequence:

>1020_bases
ATGATGATCAAAAAGCCATTCACTATTCTCCCTCTCGCCCTGGCGCTGCTTGGCCCGATATCCTCTTCTCCCGGTTTAGC
GGCTCCGACGCCCGCCGCGGTGCCCGACACCATAGCCGGGACCGTCCGCCAGACCGCTCCCGCAATTTATCGATTTACGA
TTGGCGATGCCCAGATAACGGCATTGTCGGATGGGTCGGTCCCGCTGGACCTGCACCAGTTGCTGCGCGGCGTCTCGGCG
CAAACGATCGACGAAATTCTTGCCCGCAGTTTCCTAGCCAATCCCGCAGAGGCTTCGATCAACGCTTATCTGATCGACTT
CAACGGGCGGCGGATCCTTGTCGATGTCGGTGCCGGCGATCTTTTCGGCCTAGGCAACGGCGGCAGGCTGCTCGAAGCGC
TGGCAGCAGCTGGGGCCGCGCCGGAGACAATCACCGACATACTCATCACCCATGTCCACAGCGACCATAGCGGCGGTCTC
ACGAAGGCGGGCAAGATCGTCTTCCCGCGCGCGACGGTCTATGCCGGCGGTGCAGATATTCGCTTTTTCTCCGATGTTGC
CAACGCGGCTAAAAGCGGGATCGACAAGCGCTTCTGGACCCAGACCGAGCAGACGCTGACGCCCTATGTCACGGCCGGCC
GGGTGAAGCCGATCGATACCGATGGCGAAGTCGTGCCGGGCATTCGTGCCGAACTGCAGCCTGGGCACACCCCGGGCACC
GCCTTCTACACCTTGACCAGCAAGGGGCAGAGTATCGTCTTCGTCGGCGATGTCATCCACGCCGGCGCGGTTCAATTTCC
ACGCCCCGACGTGACGATCACTTTCGATGTTCGCCAGGACGAGGCGCGCGCCGTGCGGAAAGCCGCGTTCACCCGCTTCG
CTCGCGACCGTATGATGATTGCGGCGCCCCATCTTCCGTTCCCGGGGGTGGGTCACATTGCCGCCGACGGATCCGGCTAC
CGCTGGTACCCCATCGAACAGACGGATCGCGAGCCCATGAAGGAGAGGCTCAAGCTCTGA

Upstream 100 bases:

>100_bases
AGCACGCTGTCGATCGCGACAATGTCTCGCAAGACCCCGCCAGCGCTGGGATAATGACTGACAGTTCTTCATCCATCGCA
ACTCAATCAAGGACGTCGCC

Downstream 100 bases:

>100_bases
AGCTCGCATCGCCTCTTGCATTCTCCAGCCGCTGCGCTATTTATATGCGCGACGCATATAAACTGGAATGCGATTGACCA
AGGACGCTTCACCTTCCGAT

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase-Like; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metal Dependent Hydrolase; Metallo-Beta-Lactamase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Metallo-Beta-Lactamase Superfamily; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA
QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL
TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT
AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY
RWYPIEQTDREPMKERLKL

Sequences:

>Translated_339_residues
MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA
QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL
TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT
AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY
RWYPIEQTDREPMKERLKL
>Mature_339_residues
MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQITALSDGSVPLDLHQLLRGVSA
QTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGDLFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGL
TKAGKIVFPRATVYAGGADIRFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT
AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMIAAPHLPFPGVGHIAADGSGY
RWYPIEQTDREPMKERLKL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36102; Mature: 36102

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQIT
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEE
ALSDGSVPLDLHQLLRGVSAQTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGD
EECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCC
LFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGLTKAGKIVFPRATVYAGGADI
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCE
RFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT
EHHHHHHHHHHHCCCHHHHCCCHHHCCCEEECCEEEECCCCCCCCCCCHHCCCCCCCCCC
AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMI
EEEEEECCCCEEEEEECCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEE
AAPHLPFPGVGHIAADGSGYRWYPIEQTDREPMKERLKL
EECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure
MMIKKPFTILPLALALLGPISSSPGLAAPTPAAVPDTIAGTVRQTAPAIYRFTIGDAQIT
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEE
ALSDGSVPLDLHQLLRGVSAQTIDEILARSFLANPAEASINAYLIDFNGRRILVDVGAGD
EECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCC
LFGLGNGGRLLEALAAAGAAPETITDILITHVHSDHSGGLTKAGKIVFPRATVYAGGADI
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCE
RFFSDVANAAKSGIDKRFWTQTEQTLTPYVTAGRVKPIDTDGEVVPGIRAELQPGHTPGT
EHHHHHHHHHHHCCCHHHHCCCHHHCCCEEECCEEEECCCCCCCCCCCHHCCCCCCCCCC
AFYTLTSKGQSIVFVGDVIHAGAVQFPRPDVTITFDVRQDEARAVRKAAFTRFARDRMMI
EEEEEECCCCEEEEEECCHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEEE
AAPHLPFPGVGHIAADGSGYRWYPIEQTDREPMKERLKL
EECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA