Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485602

Identifier: 103485602

GI number: 103485602

Start: 104813

End: 105145

Strand: Reverse

Name: 103485602

Synonym: Sala_0105

Alternate gene names: NA

Gene position: 105145-104813 (Counterclockwise)

Preceding gene: 103485603

Following gene: 103485601

Centisome position: 3.14

GC content: 60.36

Gene sequence:

>333_bases
GTGGCGATGGCCGGCAGATCTCACCTTGCGAAGGATCTTATGATGGAAGCGTTTGTCGTATTCACGCGGGAAGACACCAC
GGATGTGGATGAACTCGCGGCTTATTCTGCCCGCGTCGGCCCGTCGTTCGATGGGCATGACGTCACTTTTCTCGCCGCTT
ATGGCGCGATGGAGAATTTGGAGGGGTCGCCGATCGAAGGCGCCGTCATCTTGCGGTTCCCCACGATGCAAGCCGCGCAT
GACTGGTATCATAGCCCCGCCTACCAAGCTGTTGCTGCGCATCGCTTCGCCGGTGCCCGCTACCGCGGGTTTATCGTCGA
GGGGCTGCGTTGA

Upstream 100 bases:

>100_bases
TCTCCGGAGGCACTTATCAGCAGGACCAGGATGCCTGCGTTGAGGCACTCCAGAAAATCGGGTTCGAACTGCCAGCCTGA
CGACTGTCAGGCCATCGTCG

Downstream 100 bases:

>100_bases
CTCCCCCGCATTATAATGGCGGTACTGACCAAGAGCTGTGCGCCCAAACACCAACACCGGGAGTTTCTAAATGATCGAGG
CCGAGGCACGCATCGCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAMAGRSHLAKDLMMEAFVVFTREDTTDVDELAAYSARVGPSFDGHDVTFLAAYGAMENLEGSPIEGAVILRFPTMQAAH
DWYHSPAYQAVAAHRFAGARYRGFIVEGLR

Sequences:

>Translated_110_residues
MAMAGRSHLAKDLMMEAFVVFTREDTTDVDELAAYSARVGPSFDGHDVTFLAAYGAMENLEGSPIEGAVILRFPTMQAAH
DWYHSPAYQAVAAHRFAGARYRGFIVEGLR
>Mature_109_residues
AMAGRSHLAKDLMMEAFVVFTREDTTDVDELAAYSARVGPSFDGHDVTFLAAYGAMENLEGSPIEGAVILRFPTMQAAHD
WYHSPAYQAVAAHRFAGARYRGFIVEGLR

Specific function: Unknown

COG id: COG5470

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12099; Mature: 11968

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAGRSHLAKDLMMEAFVVFTREDTTDVDELAAYSARVGPSFDGHDVTFLAAYGAMENL
CCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCC
EGSPIEGAVILRFPTMQAAHDWYHSPAYQAVAAHRFAGARYRGFIVEGLR
CCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
AMAGRSHLAKDLMMEAFVVFTREDTTDVDELAAYSARVGPSFDGHDVTFLAAYGAMENL
CCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCC
EGSPIEGAVILRFPTMQAAHDWYHSPAYQAVAAHRFAGARYRGFIVEGLR
CCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA