| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485584
Identifier: 103485584
GI number: 103485584
Start: 90499
End: 90834
Strand: Reverse
Name: 103485584
Synonym: Sala_0086
Alternate gene names: NA
Gene position: 90834-90499 (Counterclockwise)
Preceding gene: 103485585
Following gene: 103485582
Centisome position: 2.72
GC content: 58.33
Gene sequence:
>336_bases ATGCCGCGAAATGTCGCAGGGCTGCTCCCCGAAAGGCGGCTCGACCGCGCCGATCGCGCGAAAACGACTGACCACCCGCC GCCGGCATCAAAAAACCATGTTGAAGCCATAGAGGTGGAGAGCGAGCGTCACCCAGACAAACGTGACCCCAGCGAGGACC AGCAAAGTCGCGCCGAGCTTCACAGTCCATCGGCGCTTGTCCCTGATACTCAGCAAGAGATGCCAGAATGCTGTCGCGAG CAAGTAGCGGCAGATCCGCTCTTTCGTGTAGATTCGCGTATAGAGCACTTATTCCGCCCACATGGCATTGAACCGCTGGA TGGACATATCTGCTGA
Upstream 100 bases:
>100_bases CGCTGCGCGCCGTTGCGCTCCTCTCCGGGGAGTCGACGTCGATGGCGATGTCCTTGGCTTCGAAGGGCGTCCCTACAAGC GGTGCGGCCTCGATAAAGAC
Downstream 100 bases:
>100_bases CCGTAAGTCAGGGCTTGCTCACGGCCAAATCTTGCCATTTAAGGCGCGACCGTCGGCAAAGGGGGCGGTCTTGCGACCGT CCCCTGCTCCACCTCAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPRNVAGLLPERRLDRADRAKTTDHPPPASKNHVEAIEVESERHPDKRDPSEDQQSRAELHSPSALVPDTQQEMPECCRE QVAADPLFRVDSRIEHLFRPHGIEPLDGHIC
Sequences:
>Translated_111_residues MPRNVAGLLPERRLDRADRAKTTDHPPPASKNHVEAIEVESERHPDKRDPSEDQQSRAELHSPSALVPDTQQEMPECCRE QVAADPLFRVDSRIEHLFRPHGIEPLDGHIC >Mature_110_residues PRNVAGLLPERRLDRADRAKTTDHPPPASKNHVEAIEVESERHPDKRDPSEDQQSRAELHSPSALVPDTQQEMPECCREQ VAADPLFRVDSRIEHLFRPHGIEPLDGHIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12611; Mature: 12480
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNVAGLLPERRLDRADRAKTTDHPPPASKNHVEAIEVESERHPDKRDPSEDQQSRAEL CCCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH HSPSALVPDTQQEMPECCREQVAADPLFRVDSRIEHLFRPHGIEPLDGHIC CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRNVAGLLPERRLDRADRAKTTDHPPPASKNHVEAIEVESERHPDKRDPSEDQQSRAEL CCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH HSPSALVPDTQQEMPECCREQVAADPLFRVDSRIEHLFRPHGIEPLDGHIC CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA