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The map label for this gene is 103485575

Identifier: 103485575

GI number: 103485575

Start: 83189

End: 83740

Strand: Reverse

Name: 103485575

Synonym: Sala_0077

Alternate gene names: NA

Gene position: 83740-83189 (Counterclockwise)

Preceding gene: 103485577

Following gene: 103485574

Centisome position: 2.5

GC content: 59.78

Gene sequence:

>552_bases
TTGGCGAGACCAAAGAGCGAGCAGAAGCGAAACGCCATCCTTGCGGCAACGACCGGGTTGATCGCAGAGCAGGGTCTGGG
CGCGCCAACTGCGGAGATCGCAAAACAGGCCGGCGTGCCGCATGGCTCGGTCTTTGCCTATTTCAACACCAAGGCCGAAT
TGCTGCGGACCCTCTATGTCGAGCTGAGCGCGGAGATGACCGACACGGTGATGGCCGATATGCCCGGTGACGAAAGCGCT
CGAGACCAGTTTCGTCATCTGTGGGTTCGCTGGACGCATTGGGGCGCATCGAACCCGTCGAAGCGGCGCGCGCAGGCGAT
CCTGAAGTTGTCGGTCGAGCGCCGCCAAGCCGATGATTATGCTTCACCGGTTTTCAAGATAATTGAGCGTGCGAGCGAGC
ATGGCACCCTCGGGGATGGGCCGCCGCTCTACGTCATCGAACTTGTCGATGCCTGGGTGTCGACGACAATCGACTTCATG
ATCGGCCATCCCAAGGAAGCCGACGAATATTGTGAGCGCGGGTTTAACGCCATGTGGCACGCCTTGAATTGA

Upstream 100 bases:

>100_bases
TTCCTTTGGAAGCGGGGAGCGCGCCAACATAGGAACAGCGATAAGGTTTGACAATGACTGAGTAGTCAGTCATTTATAGT
GAAGACTGAAAGGGACGATT

Downstream 100 bases:

>100_bases
GACGATCTCTCGACGTTTGATGGGTTGGGTAGCTTTCGGCGCCCTTGCATTTCCCATGCTGACGATCCGGCAGCATCGGG
CGCGTCGCGCGCCCACTGGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulator Member; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MARPKSEQKRNAILAATTGLIAEQGLGAPTAEIAKQAGVPHGSVFAYFNTKAELLRTLYVELSAEMTDTVMADMPGDESA
RDQFRHLWVRWTHWGASNPSKRRAQAILKLSVERRQADDYASPVFKIIERASEHGTLGDGPPLYVIELVDAWVSTTIDFM
IGHPKEADEYCERGFNAMWHALN

Sequences:

>Translated_183_residues
MARPKSEQKRNAILAATTGLIAEQGLGAPTAEIAKQAGVPHGSVFAYFNTKAELLRTLYVELSAEMTDTVMADMPGDESA
RDQFRHLWVRWTHWGASNPSKRRAQAILKLSVERRQADDYASPVFKIIERASEHGTLGDGPPLYVIELVDAWVSTTIDFM
IGHPKEADEYCERGFNAMWHALN
>Mature_182_residues
ARPKSEQKRNAILAATTGLIAEQGLGAPTAEIAKQAGVPHGSVFAYFNTKAELLRTLYVELSAEMTDTVMADMPGDESAR
DQFRHLWVRWTHWGASNPSKRRAQAILKLSVERRQADDYASPVFKIIERASEHGTLGDGPPLYVIELVDAWVSTTIDFMI
GHPKEADEYCERGFNAMWHALN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20400; Mature: 20269

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPKSEQKRNAILAATTGLIAEQGLGAPTAEIAKQAGVPHGSVFAYFNTKAELLRTLYV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
ELSAEMTDTVMADMPGDESARDQFRHLWVRWTHWGASNPSKRRAQAILKLSVERRQADDY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ASPVFKIIERASEHGTLGDGPPLYVIELVDAWVSTTIDFMIGHPKEADEYCERGFNAMWH
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ALN
CCC
>Mature Secondary Structure 
ARPKSEQKRNAILAATTGLIAEQGLGAPTAEIAKQAGVPHGSVFAYFNTKAELLRTLYV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
ELSAEMTDTVMADMPGDESARDQFRHLWVRWTHWGASNPSKRRAQAILKLSVERRQADDY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ASPVFKIIERASEHGTLGDGPPLYVIELVDAWVSTTIDFMIGHPKEADEYCERGFNAMWH
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ALN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA