Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485570

Identifier: 103485570

GI number: 103485570

Start: 78229

End: 79272

Strand: Reverse

Name: 103485570

Synonym: Sala_0072

Alternate gene names: NA

Gene position: 79272-78229 (Counterclockwise)

Preceding gene: 103485571

Following gene: 103485568

Centisome position: 2.37

GC content: 63.7

Gene sequence:

>1044_bases
ATGTCCGGCTTGCCGCTGCGCGCAAAGGATGCTGCTTTCCGGGTGCCGGTCGTCGACTCGCTCACGCTGACCGTTCTCAC
CGACAGCGGGACATTCGGACCTTTTCTTCCCGATCTGGACCTGCCCGGTCTAAAGGTGTTGCGTGCCGGCAACGGAAGCC
CTCCAGGCTACACCCGCATGTCGCCCAAAGCCTTGATGGGGGAGTTCGGTCTTTCCCTGCTCGCGGATTCGCGCGTCGGA
GACGCGTCACGCCGGGTGCTCGTCGACTTCGGCTACACGGCTGAGGTCCTCGCCAACAATATGGGGATGCTCGGTATCGA
TCCATCGAGCATCGACGCGTCCGTGCTGAGCCATGGGCACCTCGATCACTACGGCGGCTTTCCTGCCATGACCGGCAGCG
CAGAAAAACGCGGTCGTCCGCTGCCGCTCTACGTCGGCGGGGAGGAAACCTTCTGCGAGCGGGTCGCGATGATCGGCGAT
CCGCCGCCGGTGATGGGCATTCTAGATCGCGCGGCGCTGACCAAAGCCGGTTACGAAGTCCGCATCTCGCCGACGCCTCA
GATCGTCGCCGATCAGGCGTTCACGACCGGGATCATCCCGCTCGAGACATTCGAGCGCACCGCGATCCCGACGCGGATGC
GGCCCGGAGCCGGCTGCGAGCGGACCGGACTGCGCAGCGACAAGCGTGATCTGGCCGAAGTCACCGACGACGGCGAGCAT
GAGCTCGCCACCTGCTATGCCATCAAGGGACTTGGCTTGGTGGTGATTGCATCGTGTAGCCATCGCGGCGTCCTCAATTC
GGTCCGGCGCGCGCAGGCGATCAGCGGCATTTCAAAGGTGCAAATGGTGATCGGCGGCTTCCATCTCGTCCGCCCGCGCA
CCGAGGAGGAGGCGCGGCAGACCGTCTCAGCGTTCAAGGTGATCGATCCCGACTATATCGTGCCGATGCACTGCACCGGC
GAGGTCTTTATCGAGGAAGCCATCCGGCAGATGCCCTCAAAGGTCATCCGTCCCTATGTCGGTACGCGCTTAGCAATGGC
ATGA

Upstream 100 bases:

>100_bases
GAGTAGCGTCCGGCGAAATTCGGAGGTGCAGATGACGGTCGAAGCCCTGGGACTATTCACACGTCGATCGATGCTGGCCG
GGGCCATCGGGGCGGCGGCG

Downstream 100 bases:

>100_bases
AGGCAAAAATTGGCCGGTAGGAGACTGACCGCTTCTTGGCACCGAACCGGGTATAGCGGACCTTGCCAATGTGACGAACG
TCAAAGAGTGCGGCGGCCGC

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSGLPLRAKDAAFRVPVVDSLTLTVLTDSGTFGPFLPDLDLPGLKVLRAGNGSPPGYTRMSPKALMGEFGLSLLADSRVG
DASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGHLDHYGGFPAMTGSAEKRGRPLPLYVGGEETFCERVAMIGD
PPPVMGILDRAALTKAGYEVRISPTPQIVADQAFTTGIIPLETFERTAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEH
ELATCYAIKGLGLVVIASCSHRGVLNSVRRAQAISGISKVQMVIGGFHLVRPRTEEEARQTVSAFKVIDPDYIVPMHCTG
EVFIEEAIRQMPSKVIRPYVGTRLAMA

Sequences:

>Translated_347_residues
MSGLPLRAKDAAFRVPVVDSLTLTVLTDSGTFGPFLPDLDLPGLKVLRAGNGSPPGYTRMSPKALMGEFGLSLLADSRVG
DASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGHLDHYGGFPAMTGSAEKRGRPLPLYVGGEETFCERVAMIGD
PPPVMGILDRAALTKAGYEVRISPTPQIVADQAFTTGIIPLETFERTAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEH
ELATCYAIKGLGLVVIASCSHRGVLNSVRRAQAISGISKVQMVIGGFHLVRPRTEEEARQTVSAFKVIDPDYIVPMHCTG
EVFIEEAIRQMPSKVIRPYVGTRLAMA
>Mature_346_residues
SGLPLRAKDAAFRVPVVDSLTLTVLTDSGTFGPFLPDLDLPGLKVLRAGNGSPPGYTRMSPKALMGEFGLSLLADSRVGD
ASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGHLDHYGGFPAMTGSAEKRGRPLPLYVGGEETFCERVAMIGDP
PPVMGILDRAALTKAGYEVRISPTPQIVADQAFTTGIIPLETFERTAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEHE
LATCYAIKGLGLVVIASCSHRGVLNSVRRAQAISGISKVQMVIGGFHLVRPRTEEEARQTVSAFKVIDPDYIVPMHCTGE
VFIEEAIRQMPSKVIRPYVGTRLAMA

Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 37221; Mature: 37090

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPLRAKDAAFRVPVVDSLTLTVLTDSGTFGPFLPDLDLPGLKVLRAGNGSPPGYTRM
CCCCCCCCCCCEEECCEECCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
SPKALMGEFGLSLLADSRVGDASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGH
CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCEEECCCCHHHHHHHHCCC
LDHYGGFPAMTGSAEKRGRPLPLYVGGEETFCERVAMIGDPPPVMGILDRAALTKAGYEV
CHHCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEE
RISPTPQIVADQAFTTGIIPLETFERTAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEH
EECCCCCHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
ELATCYAIKGLGLVVIASCSHRGVLNSVRRAQAISGISKVQMVIGGFHLVRPRTEEEARQ
HHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
TVSAFKVIDPDYIVPMHCTGEVFIEEAIRQMPSKVIRPYVGTRLAMA
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGLPLRAKDAAFRVPVVDSLTLTVLTDSGTFGPFLPDLDLPGLKVLRAGNGSPPGYTRM
CCCCCCCCCCEEECCEECCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
SPKALMGEFGLSLLADSRVGDASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGH
CHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCEEECCCCHHHHHHHHCCC
LDHYGGFPAMTGSAEKRGRPLPLYVGGEETFCERVAMIGDPPPVMGILDRAALTKAGYEV
CHHCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEE
RISPTPQIVADQAFTTGIIPLETFERTAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEH
EECCCCCHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
ELATCYAIKGLGLVVIASCSHRGVLNSVRRAQAISGISKVQMVIGGFHLVRPRTEEEARQ
HHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
TVSAFKVIDPDYIVPMHCTGEVFIEEAIRQMPSKVIRPYVGTRLAMA
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]