| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is arsR [H]
Identifier: 103485532
GI number: 103485532
Start: 32993
End: 33979
Strand: Direct
Name: arsR [H]
Synonym: Sala_0034
Alternate gene names: 103485532
Gene position: 32993-33979 (Clockwise)
Preceding gene: 103485528
Following gene: 103485533
Centisome position: 0.99
GC content: 66.46
Gene sequence:
>987_bases ATGAGCGAGCTGATCGACATTTGCCGGGCCTTGGCCGATCCGACCCGCTTGCGAGTCGTGGCCTTGCTGCGCGAGATGGA ACTGGCGATCGGCGAGTTGGCGGTGGTTCTGGACCAGAGCCAGCCGCGTGTTTCCCGCCACGTCCGCATCCTGGTCGAAG CGGGGATCGTCGAGCGGCGCCGTGAGGGAAGCTGGGTATTCCTGCGCATCGTCGCGGATGGGCCGATCGCCGCAATCATC GCGCAAGCGGACAAATGGCCTTTTTCTGCGCGCGAAATGCGCGTGATCGCGCATGATGCGCGTCGCCTTGCGGCGGTGCG CGCCGAACGCGCGGCAGCGGCCGCGCGATATTTCGCCGAACATGCTGCCGAATGGGATGCCATTCGCTCACGCCATGTCG CCGAAAGCGAGGTCGAAGCGGCGATGCTGGCGATGATGCACAACCGCCGCCTTGGCCACCTTCTCGACATCGGGACGGGA ACCGGGCGGATGGCAGAGATTTTTGCTCCGACCGCGCGCCGCATCACCGCCCTCGACCGCAGCCCCGAAATGCTGCGGAT CGCCCGCGCCAAGCTCGAAAGACAGCCGGTGCCCGTCGACCTGATCCAGGGCGATTTTCTGGAGTTGCCGGTGGGGGACG CGAGCGTCGACAGCATCGTCATTCATCAGGCGCTGCATTTTGCGCACGAACCCGATCGCGTGATCGCGGAAGCGAGCCGG GTGCTGCGCGGCGGCGGCCACCTGCTGATCGTCGATTTCGCGCCGCACGAGGATGAGGAATTGCGCACGCTTGCCGCGCA CGCCCGCCTCGGCTTTTCGGACGCGCAGATCCGCGGCTGGTTCGCCTCGGCGGGCCTGCTGCTCGAAACCACACAGACGC TCGAAGGCGGGAAGCTGGCCGTCAAGCTCTGGCTCGGACGTCGCCGGAGCGACCAGGATCAACCCCCCGTCAGCGACGGC GGACCGACGAAAAGGCTTGCTGCATGA
Upstream 100 bases:
>100_bases GCCTTTCATCGCAATCGGTCGATGGTCTGCGCGCGCAGCGCGGAAATCGCGGGATGAGACTTGGTTGACCAGATATAAAG AAAGCTTTATATGATGATTG
Downstream 100 bases:
>100_bases CCGCGAATCTCGACGCGCTGGCGGAAGCGCGCCGCGCGGCGGCGTCGCCGTTGTTCGCCAATCTCGACGGCGACGTCGGC GTCAGCTTCGAGTTTTTCCC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSELIDICRALADPTRLRVVALLREMELAIGELAVVLDQSQPRVSRHVRILVEAGIVERRREGSWVFLRIVADGPIAAII AQADKWPFSAREMRVIAHDARRLAAVRAERAAAAARYFAEHAAEWDAIRSRHVAESEVEAAMLAMMHNRRLGHLLDIGTG TGRMAEIFAPTARRITALDRSPEMLRIARAKLERQPVPVDLIQGDFLELPVGDASVDSIVIHQALHFAHEPDRVIAEASR VLRGGGHLLIVDFAPHEDEELRTLAAHARLGFSDAQIRGWFASAGLLLETTQTLEGGKLAVKLWLGRRRSDQDQPPVSDG GPTKRLAA
Sequences:
>Translated_328_residues MSELIDICRALADPTRLRVVALLREMELAIGELAVVLDQSQPRVSRHVRILVEAGIVERRREGSWVFLRIVADGPIAAII AQADKWPFSAREMRVIAHDARRLAAVRAERAAAAARYFAEHAAEWDAIRSRHVAESEVEAAMLAMMHNRRLGHLLDIGTG TGRMAEIFAPTARRITALDRSPEMLRIARAKLERQPVPVDLIQGDFLELPVGDASVDSIVIHQALHFAHEPDRVIAEASR VLRGGGHLLIVDFAPHEDEELRTLAAHARLGFSDAQIRGWFASAGLLLETTQTLEGGKLAVKLWLGRRRSDQDQPPVSDG GPTKRLAA >Mature_327_residues SELIDICRALADPTRLRVVALLREMELAIGELAVVLDQSQPRVSRHVRILVEAGIVERRREGSWVFLRIVADGPIAAIIA QADKWPFSAREMRVIAHDARRLAAVRAERAAAAARYFAEHAAEWDAIRSRHVAESEVEAAMLAMMHNRRLGHLLDIGTGT GRMAEIFAPTARRITALDRSPEMLRIARAKLERQPVPVDLIQGDFLELPVGDASVDSIVIHQALHFAHEPDRVIAEASRV LRGGGHLLIVDFAPHEDEELRTLAAHARLGFSDAQIRGWFASAGLLLETTQTLEGGKLAVKLWLGRRRSDQDQPPVSDGG PTKRLAA
Specific function: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenat
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=99, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 36222; Mature: 36091
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELIDICRALADPTRLRVVALLREMELAIGELAVVLDQSQPRVSRHVRILVEAGIVERR CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEHHHHHHHC REGSWVFLRIVADGPIAAIIAQADKWPFSAREMRVIAHDARRLAAVRAERAAAAARYFAE CCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAAEWDAIRSRHVAESEVEAAMLAMMHNRRLGHLLDIGTGTGRMAEIFAPTARRITALDR HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCHHHHHHHCCC SPEMLRIARAKLERQPVPVDLIQGDFLELPVGDASVDSIVIHQALHFAHEPDRVIAEASR CHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH VLRGGGHLLIVDFAPHEDEELRTLAAHARLGFSDAQIRGWFASAGLLLETTQTLEGGKLA HHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHEEHHHHCCEEEEECCCCCCCEEE VKLWLGRRRSDQDQPPVSDGGPTKRLAA EEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SELIDICRALADPTRLRVVALLREMELAIGELAVVLDQSQPRVSRHVRILVEAGIVERR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEHHHHHHHC REGSWVFLRIVADGPIAAIIAQADKWPFSAREMRVIAHDARRLAAVRAERAAAAARYFAE CCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAAEWDAIRSRHVAESEVEAAMLAMMHNRRLGHLLDIGTGTGRMAEIFAPTARRITALDR HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCHHHHHHHCCC SPEMLRIARAKLERQPVPVDLIQGDFLELPVGDASVDSIVIHQALHFAHEPDRVIAEASR CHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH VLRGGGHLLIVDFAPHEDEELRTLAAHARLGFSDAQIRGWFASAGLLLETTQTLEGGKLA HHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHEEHHHHCCEEEEECCCCCCCEEE VKLWLGRRRSDQDQPPVSDGGPTKRLAA EEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2408017; 1838573; 8416957 [H]