Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485509

Identifier: 103485509

GI number: 103485509

Start: 8689

End: 9192

Strand: Reverse

Name: 103485509

Synonym: Sala_0011

Alternate gene names: NA

Gene position: 9192-8689 (Counterclockwise)

Preceding gene: 103485510

Following gene: 103485508

Centisome position: 0.27

GC content: 65.08

Gene sequence:

>504_bases
ATGATGAGCAAGCCCCCCCTGACCCTATGCCTCTGGTACGAAGGCGACGCCGAGGAAGCGGCCAGTTTCTATGCCGAAAC
CTTTGCCGACAGCCATGTGGGCGCCGTCCACCGCGCACCCGGCGACACGCCGGGCGGCAAGGAAGGCGATGTGCTGACCG
TCGAGTTCACGCTGCTCGGCACGCCGTGCCTCGGCCTCAACGGCCCACCGATCTTCAAGCATAGCGAGGCCTTTTCCTTC
ATCGTCCACACCGACACGCAGGAGGAAACCGACCGGCTGTGGGACGCGATTGTCGGCAATGGCGGGCAGGAAAGCATGTG
CGGCTGGTGCAAGGACAAATGGGGCGTGAGCTGGCAGATTACCCCGCGCGTCCTGATCGAAGCGACGACGAGCAGCGACA
AGGCCGCCGCCAAGCGCGCGTTCGAGGCGATGATGACGATGAAAAAGATCGACATCGCGGCGATCGAGGCCGCGGTGCGG
GGCGAAGCCGTTGGCGCGGCGTAG

Upstream 100 bases:

>100_bases
ATGCGATGAACGCCATCGACCCGCAGGGCGCGGCGATCGGCTTTGTTGGGCCGCGCAAAGGCTGACCCCCCATACCCCCC
AGGCAATATGAAGGAGAGTG

Downstream 100 bases:

>100_bases
TCCCGCGCTCTTCGCCTGGGCGCTCTGTGGCACGCTCGACATCGTCTATGCGGCGGTATCGAGCGTACTTCAGGGCGGCA
CCGTGCCGGGCATGTTGCGC

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; 3-Demethylubiquinone-9 3-Methyltransferase Family

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MMSKPPLTLCLWYEGDAEEAASFYAETFADSHVGAVHRAPGDTPGGKEGDVLTVEFTLLGTPCLGLNGPPIFKHSEAFSF
IVHTDTQEETDRLWDAIVGNGGQESMCGWCKDKWGVSWQITPRVLIEATTSSDKAAAKRAFEAMMTMKKIDIAAIEAAVR
GEAVGAA

Sequences:

>Translated_167_residues
MMSKPPLTLCLWYEGDAEEAASFYAETFADSHVGAVHRAPGDTPGGKEGDVLTVEFTLLGTPCLGLNGPPIFKHSEAFSF
IVHTDTQEETDRLWDAIVGNGGQESMCGWCKDKWGVSWQITPRVLIEATTSSDKAAAKRAFEAMMTMKKIDIAAIEAAVR
GEAVGAA
>Mature_167_residues
MMSKPPLTLCLWYEGDAEEAASFYAETFADSHVGAVHRAPGDTPGGKEGDVLTVEFTLLGTPCLGLNGPPIFKHSEAFSF
IVHTDTQEETDRLWDAIVGNGGQESMCGWCKDKWGVSWQITPRVLIEATTSSDKAAAKRAFEAMMTMKKIDIAAIEAAVR
GEAVGAA

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17939; Mature: 17939

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKPPLTLCLWYEGDAEEAASFYAETFADSHVGAVHRAPGDTPGGKEGDVLTVEFTLLG
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEC
TPCLGLNGPPIFKHSEAFSFIVHTDTQEETDRLWDAIVGNGGQESMCGWCKDKWGVSWQI
CCCCCCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEE
TPRVLIEATTSSDKAAAKRAFEAMMTMKKIDIAAIEAAVRGEAVGAA
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMSKPPLTLCLWYEGDAEEAASFYAETFADSHVGAVHRAPGDTPGGKEGDVLTVEFTLLG
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEC
TPCLGLNGPPIFKHSEAFSFIVHTDTQEETDRLWDAIVGNGGQESMCGWCKDKWGVSWQI
CCCCCCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEE
TPRVLIEATTSSDKAAAKRAFEAMMTMKKIDIAAIEAAVRGEAVGAA
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA