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The map label for this gene is oxaA [H]

Identifier: 103485502

GI number: 103485502

Start: 3205

End: 4959

Strand: Reverse

Name: oxaA [H]

Synonym: Sala_0004

Alternate gene names: 103485502

Gene position: 4959-3205 (Counterclockwise)

Preceding gene: 103485503

Following gene: 103485501

Centisome position: 0.15

GC content: 64.27

Gene sequence:

>1755_bases
GTGGACGACAAGCGTAACCTGATCGCGGCAATCCTGTTGTCGGTGGCGATTTTGATCGGCTGGAACTTCGTCGCCGAGCG
GTTTTTCCCGACCCCCGACCAGCCCGATGTGACCAAGACCGTCGCCGGCGCCAACGGCGCGCCCGCGACCGCGCCCACGG
CGCAGGGCCAGCCGAGCGCGCTGCCCGCCCCGACGGCGGCCACCCCCGCGGCGGCGCAGGCGATCCGCCCGGTCGACGTC
GTGCTCGCCGAAGGGCAGCGCATCCCGATCGAAACCCCGGCAATCCGCGGCTCGATCAACCTCGTCGGCGCGCGCATCGA
CGACATCACGCTCACCAAATATCGCCAGACGATCAAGAAGGACTCGCCCGCGGTGCGGCTGTTCGCGCCGGGCGGCACCC
CCGCCGCCTATTTTGCCAGCCTCGGCTGGACGGCGCAGGGCATTCAGCTTCCGGGCGCGGGCACCGTCTGGACTGCGAAC
GGAACGAAGCTGACCCCGACCACCCCGGTAACGCTGAGCTGGACGAACACGACCGGCCAGACCTTCCGCATCGAATATAG
CATCGACGCCAATTACCTGATCACCGCGAAGCAGACGGTGGTGAACGCCGGCACCGCGCCGGTGTCGCTCAGCAGCTTTG
CGCTCATCGACCGCCTCGGCAAGCCGACCGACCCGCACGAGGTCGACAGCTGGACGATCCATGTCGGGCCGACCGGCTAT
CTCGACGGCAAGTCGGTGTTCGACATCGACTATGACGACCTCGAGGAAGCGCCGAACCGCAGCGTGCGCTACACTTCGGC
AGGCTGGCTGGGCTTCACCGACAAATATTGGCTCGCCGCGATCGTCCCGGCGAAGGGCGAACGCGTGACCGCGGCGATCA
GCTCGCCTGCGACGAACAATTACCAGACCTTGTTCGCGCGTGATTTTACGCAGGTCGCGCCGGGCCAGCAACTGACGGCG
ACGAGCCGCATCTTTGCGGGCGCCAAGGAAGTCGAGATTCTCGAAACCTATCAGGACGACCAGGGCATCACCCGCCTGTC
GAACGCGATCGACTGGGGCTGGTTCGAGTTTTTCGAGGTGCCGATTTTCAAGCTGCTCCACTGGCTGTTCGAGAAGGTCG
GCAATTTCGGGCTCGCGATCATGGCGCTGACGCTGATCATCCGCCTGCTGATGTTCCCGATCGCCAACCGGCAGTTTTCG
TCGATGGCACAGATGCGCGTCGTCCAGCCGAAGATGAAGGCGCTGCAGGAGCGCTACAAGGACGACAAGCCCAGGATGCA
GCAGGAGCTGATGAAGCTCTATAAGGACGAGAAGATCAATCCGCTCGCGGGCTGCCTGCCGATCGTCATCCAGATCCCGA
TCTTCTATGCGCTGTACAAGGTGCTGATGCTGGCGATCGAAATGCGCCACCAACCGTTCATCCTGTGGATCAAGGATCTG
TCGGCGCCCGATCCGCTGCACATCCTCAACCTCTTCGGCCTCTTGCCCTTCACCCCGCCGTCGATCCTGGCGATCGGGCT
GCTCGCGGTGATCCTGGGCGTGACGATGTGGCTGCAGTTCCGTCTGAACCCCGCCCCCGCCGACCCGGTGCAGGCGCAGG
TGTTCAAGATCATGCCGTGGCTGTTCATGTTCATCATGGCGCCCTTCGCGGCGGGCCTGCTGCTTTACTGGATCACCAAC
AATATCCTGTCGATCGGGCAGCAGCAGTGGATGTATCGCAAGTTCCCGGCGCTGAAGGCGGCGCCGGCGAAGTGA

Upstream 100 bases:

>100_bases
CGGCTATTGCGCTGCCATCCTTGGGGCGGTCACGGCTACGACCCGGTGCCTTAGTGCCCGCATCCCCCGACATTTTTGAG
ACGAAGAGAGATCGAAGAGC

Downstream 100 bases:

>100_bases
GCGAGATCGAACTCGAACCCGGTGCGGATCCCGAACGGGCGGAGCGCGCGCGCAAGCTGTTTTCAGGCCCGATCGCCTTC
CTGAAATCGGCGCCCGCGCT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSALPAPTAATPAAAQAIRPVDV
VLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKKDSPAVRLFAPGGTPAAYFASLGWTAQGIQLPGAGTVWTAN
GTKLTPTTPVTLSWTNTTGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGY
LDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSPATNNYQTLFARDFTQVAPGQQLTA
TSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFS
SMAQMRVVQPKMKALQERYKDDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDL
SAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPWLFMFIMAPFAAGLLLYWITN
NILSIGQQQWMYRKFPALKAAPAK

Sequences:

>Translated_584_residues
MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSALPAPTAATPAAAQAIRPVDV
VLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKKDSPAVRLFAPGGTPAAYFASLGWTAQGIQLPGAGTVWTAN
GTKLTPTTPVTLSWTNTTGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGY
LDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSPATNNYQTLFARDFTQVAPGQQLTA
TSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFS
SMAQMRVVQPKMKALQERYKDDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDL
SAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPWLFMFIMAPFAAGLLLYWITN
NILSIGQQQWMYRKFPALKAAPAK
>Mature_584_residues
MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSALPAPTAATPAAAQAIRPVDV
VLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKKDSPAVRLFAPGGTPAAYFASLGWTAQGIQLPGAGTVWTAN
GTKLTPTTPVTLSWTNTTGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGY
LDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSPATNNYQTLFARDFTQVAPGQQLTA
TSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFS
SMAQMRVVQPKMKALQERYKDDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDL
SAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPWLFMFIMAPFAAGLLLYWITN
NILSIGQQQWMYRKFPALKAAPAK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=607, Percent_Identity=29.6540362438221, Blast_Score=226, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 64463; Mature: 64463

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
LPAPTAATPAAAQAIRPVDVVLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKK
CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHC
DSPAVRLFAPGGTPAAYFASLGWTAQGIQLPGAGTVWTANGTKLTPTTPVTLSWTNTTGQ
CCCEEEEECCCCCHHHHHHHCCCCCCCEECCCCCEEEECCCCEECCCCCEEEEEECCCCC
TFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGY
EEEEEEEECCCEEEEEHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
LDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSPATNN
CCCCEEEECCHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC
YQTLFARDFTQVAPGQQLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEV
CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
PIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKALQERYK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPW
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
LFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPALKAAPAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
LPAPTAATPAAAQAIRPVDVVLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKK
CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHC
DSPAVRLFAPGGTPAAYFASLGWTAQGIQLPGAGTVWTANGTKLTPTTPVTLSWTNTTGQ
CCCEEEEECCCCCHHHHHHHCCCCCCCEECCCCCEEEECCCCEECCCCCEEEEEECCCCC
TFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGPTGY
EEEEEEEECCCEEEEEHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
LDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSPATNN
CCCCEEEECCHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC
YQTLFARDFTQVAPGQQLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWFEFFEV
CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
PIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKALQERYK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
DDKPRMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFILWIKDL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIMPW
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
LFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPALKAAPAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA