| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yfcF [C]
Identifier: 103485500
GI number: 103485500
Start: 1682
End: 2353
Strand: Reverse
Name: yfcF [C]
Synonym: Sala_0002
Alternate gene names: 103485500
Gene position: 2353-1682 (Counterclockwise)
Preceding gene: 103485501
Following gene: NA
Centisome position: 0.07
GC content: 66.52
Gene sequence:
>672_bases ATGAAACTCTTTATCGGCAACAAGGCCTATTCGAGCTGGAGCCTGCGCGGCTGGCTCGCCGCCAGGCACAGCGGCCTGCC GTTCGAGGAGGTCACCGTCCCGCTCTACAACGAAGAGTGGAACCAGCGGCGCGAGGGCGACGAGTTCGCGCCGTCGGGCG GCAAGGTGCCGATCCTGTGGGACGGCGCCGACATCGTCGTGTGGGACAGCCTGGCGATCATCGACTATCTCAACGAAAAG ACCGGCGGGACGCGCGGATACTGGCCCGACGATATGGCGGCGCGCGCGATGGCGCGGTCGATGGCGGCCGAAATGCACTC GAGCTTTGCGGCGCTGCGCCGCGAGCACAGCATGAACATCCGCCGCATCTATCCCGCCGCCGAGCTCACCCCCGAAGTGC AGGCCGACGTGATCCGCATCCTCCAGATCTGGGCCGAAGCGCGCGCGCGGTTCGGCGGCGAAGGCGACTATCTGTTCGGC GACTGGTCGGCGGCCGACATGATGTTCGCGCCGGTGGTGACGCGCTTCATCACTTACTCGATCCCGCTGCCCCGCTTTGC CCTGCCCTATGCACAGGCGGTGATCAGCCACCCGCACATGCAGGAATGGATCGGCGGCGCACAGGCCGAGGACTGGGTGA TCGAGAAGTTCGAGGGGCCGGTCGAGGGATAG
Upstream 100 bases:
>100_bases GAGCCACGGGCTCGCATCACCCTCTCCCAGCTTCGACTAGCCAGCAAGCTGGCAAGTCTGCGCAACCCTCCCCCGTCAAG GGGGAGGGAGGAGGATTGGC
Downstream 100 bases:
>100_bases CGCGGGGCCGCTTTCGACCGGAAGCAGCCATGTCTTCATCGTCATCCCGGACTTGATCCGGGATGACAAGGCTGGACGAT GACTGCCCGCATGACCGCCG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG
Sequences:
>Translated_223_residues MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG >Mature_223_residues MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25198; Mature: 25198
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILW CEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEECCHHHHHCCCCCCCCCCCCEEEEE DGADIVVWDSLAIIDYLNEKTGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNI CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE RRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFGDWSAADMMFAPVVTRFITYS EEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC IPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG CCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILW CEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEECCHHHHHCCCCCCCCCCCCEEEEE DGADIVVWDSLAIIDYLNEKTGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNI CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE RRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFGDWSAADMMFAPVVTRFITYS EEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC IPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG CCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA