Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yfcF [C]

Identifier: 103485500

GI number: 103485500

Start: 1682

End: 2353

Strand: Reverse

Name: yfcF [C]

Synonym: Sala_0002

Alternate gene names: 103485500

Gene position: 2353-1682 (Counterclockwise)

Preceding gene: 103485501

Following gene: NA

Centisome position: 0.07

GC content: 66.52

Gene sequence:

>672_bases
ATGAAACTCTTTATCGGCAACAAGGCCTATTCGAGCTGGAGCCTGCGCGGCTGGCTCGCCGCCAGGCACAGCGGCCTGCC
GTTCGAGGAGGTCACCGTCCCGCTCTACAACGAAGAGTGGAACCAGCGGCGCGAGGGCGACGAGTTCGCGCCGTCGGGCG
GCAAGGTGCCGATCCTGTGGGACGGCGCCGACATCGTCGTGTGGGACAGCCTGGCGATCATCGACTATCTCAACGAAAAG
ACCGGCGGGACGCGCGGATACTGGCCCGACGATATGGCGGCGCGCGCGATGGCGCGGTCGATGGCGGCCGAAATGCACTC
GAGCTTTGCGGCGCTGCGCCGCGAGCACAGCATGAACATCCGCCGCATCTATCCCGCCGCCGAGCTCACCCCCGAAGTGC
AGGCCGACGTGATCCGCATCCTCCAGATCTGGGCCGAAGCGCGCGCGCGGTTCGGCGGCGAAGGCGACTATCTGTTCGGC
GACTGGTCGGCGGCCGACATGATGTTCGCGCCGGTGGTGACGCGCTTCATCACTTACTCGATCCCGCTGCCCCGCTTTGC
CCTGCCCTATGCACAGGCGGTGATCAGCCACCCGCACATGCAGGAATGGATCGGCGGCGCACAGGCCGAGGACTGGGTGA
TCGAGAAGTTCGAGGGGCCGGTCGAGGGATAG

Upstream 100 bases:

>100_bases
GAGCCACGGGCTCGCATCACCCTCTCCCAGCTTCGACTAGCCAGCAAGCTGGCAAGTCTGCGCAACCCTCCCCCGTCAAG
GGGGAGGGAGGAGGATTGGC

Downstream 100 bases:

>100_bases
CGCGGGGCCGCTTTCGACCGGAAGCAGCCATGTCTTCATCGTCATCCCGGACTTGATCCGGGATGACAAGGCTGGACGAT
GACTGCCCGCATGACCGCCG

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione-S-Tranferase Family Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK
TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG
DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG

Sequences:

>Translated_223_residues
MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK
TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG
DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG
>Mature_223_residues
MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILWDGADIVVWDSLAIIDYLNEK
TGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNIRRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFG
DWSAADMMFAPVVTRFITYSIPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25198; Mature: 25198

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILW
CEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEECCHHHHHCCCCCCCCCCCCEEEEE
DGADIVVWDSLAIIDYLNEKTGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNI
CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
RRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFGDWSAADMMFAPVVTRFITYS
EEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
IPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG
CCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLFIGNKAYSSWSLRGWLAARHSGLPFEEVTVPLYNEEWNQRREGDEFAPSGGKVPILW
CEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEECCHHHHHCCCCCCCCCCCCEEEEE
DGADIVVWDSLAIIDYLNEKTGGTRGYWPDDMAARAMARSMAAEMHSSFAALRREHSMNI
CCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
RRIYPAAELTPEVQADVIRILQIWAEARARFGGEGDYLFGDWSAADMMFAPVVTRFITYS
EEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
IPLPRFALPYAQAVISHPHMQEWIGGAQAEDWVIEKFEGPVEG
CCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA