LOCUS NC_010407 3258645 bp DNA circular BCT 29-MAR-2010 DEFINITION Clavibacter michiganensis subsp. sepedonicus, complete genome. ACCESSION NC_010407 VERSION NC_010407.1 GI:170780462 DBLINK Project:184 KEYWORDS complete genome. SOURCE Clavibacter michiganensis subsp. sepedonicus ORGANISM Clavibacter michiganensis subsp. sepedonicus Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Clavibacter. REFERENCE 1 (bases 1 to 3258645) AUTHORS Bentley,S.D., Corton,C., Brown,S.E., Barron,A., Clark,L., Doggett,J., Harris,B., Ormond,D., Quail,M.A., May,G., Francis,D., Knudson,D., Parkhill,J. and Ishimaru,C.A. TITLE Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation JOURNAL J. Bacteriol. 190 (6), 2150-2160 (2008) PUBMED 18192393 REFERENCE 2 (bases 1 to 3258645) AUTHORS Bentley,S.D. TITLE Direct Submission JOURNAL Submitted (09-JAN-2008) Bentley S.D., Pathogen Sequencing, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UNITED KINGDOM REFERENCE 3 (bases 1 to 3258645) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AM849034. Details of Clavibacter michiganensis subspecies sepedonicus sequencing at the Sanger Institute are available at http://www.sanger.ac.uk/Projects/C_michiganensis/. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3258645 /organism="Clavibacter michiganensis subsp. sepedonicus" /mol_type="genomic DNA" /strain="ATCC33113" /sub_species="sepedonicus" /db_xref="taxon:31964" gene 1..1431 /gene="dnaA" /locus_tag="CMS_0001" /old_locus_tag="CMS0001" /db_xref="GeneID:6159115" CDS 1..1431 /gene="dnaA" /locus_tag="CMS_0001" /old_locus_tag="CMS0001" /note="binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself." /codon_start=1 /transl_table=11 /product="chromosomal replication initiation protein" /protein_id="YP_001708795.1" /db_xref="GI:170780463" /db_xref="GeneID:6159115" /translation="MSDRSDPTHAIWQKVLAALTADDRITPQLHGFISLVEPKGVMTG TLYLEVPNDLTRGMLEQRIRVPLLNAIGSLDEAAGVSNFAIVVNPGIAQDAFAQHPEP AEQPYIETPTITAPTDNPGLPASPSRGDSRLNPKYGFDTFVIGGSNRFAHAAAVAVAE APAKAYNPLFIYGDSGLGKTHLLHAIGHYAISLYPGIRVRYVSSEEFTNDFINSIANN RSSLFQSRYRDNDILLIDDIQFLQGKDSTQEAFFHTFNTLHDHNKQVVITSDLPPKHL TGFEDRMRSRFEWGLITDVQAPDLETRIAILRKKAQSEKLQVPDDILEYMATKVTSNI RELEGTLIRVTAFASLNKTPVDLALVQTVLKDLITLDEDNVIAPVDIINHTAAYFKLT VDDLYGSSRSQAVATARQIAMYLCRELTNLSLPKIGQLFGNRDHTTVMYANKKITELM KERRSIYNQVTELTSRIKQNHRYGKM" misc_feature 397..1338 /gene="dnaA" /locus_tag="CMS_0001" /old_locus_tag="CMS0001" /inference="protein motif:HMMPfam:PF00308" /note="HMMPfam hit to PF00308, Bacterial chromosomal replication initiator protein, DnaA, score 4.8e-194" misc_feature 517..540 /gene="dnaA" /locus_tag="CMS_0001" /old_locus_tag="CMS0001" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1279..1338 /gene="dnaA" /locus_tag="CMS_0001" /old_locus_tag="CMS0001" /note="PS01008 DnaA protein signature." gene 1939..3129 /gene="dnaN" /locus_tag="CMS_0002" /old_locus_tag="CMS0002" /db_xref="GeneID:6158664" CDS 1939..3129 /gene="dnaN" /locus_tag="CMS_0002" /old_locus_tag="CMS0002" /note="binds the polymerase to DNA and acts as a sliding clamp" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="YP_001708796.1" /db_xref="GI:170780464" /db_xref="GeneID:6158664" /translation="MTDKSSAHRGVHNVKFQVNRDVFSEAVSFAVKLLPQRTTLPILS GVLIEATEDGLTLSSFDYEVSARTQIQADIEEPGRVLVSGRLLADIANRLPNAPVRFT TEDSKITVSCGSAHFTLLSMPVEEYPTLPQISEQSGLLPAEQFAAAVSQVAVAASRDD VTPVITGVQLEVGETSLGLIATDRYRVAVREIDWDGGDSTTDGTSRTALVPARTLQEI GKTFGHSGTISVAITDTDDRQLIAFSADKKTVTSLLIRGNFPPVKRLFPETVDNYAVI NTADLIEATRRVQLVLEREAALRFTFTIDGLTLEAIGSEHAQASESIDALLTGVDTVV SLKPQFLLDGLGAVHSEFVRLSFTKTDNPNKPGPVLITSQSSKDQAGADNYRYLLQPN LLLR" misc_feature 1978..2331 /gene="dnaN" /locus_tag="CMS_0002" /old_locus_tag="CMS0002" /inference="protein motif:HMMPfam:PF00712" /note="HMMPfam hit to PF00712, DNA polymerase III, beta chain, score 6.7e-47" misc_feature 2353..2721 /gene="dnaN" /locus_tag="CMS_0002" /old_locus_tag="CMS0002" /inference="protein motif:HMMPfam:PF02767" /note="HMMPfam hit to PF02767, DNA polymerase III, beta chain, score 1.4e-18" misc_feature 2725..3093 /gene="dnaN" /locus_tag="CMS_0002" /old_locus_tag="CMS0002" /inference="protein motif:HMMPfam:PF02768" /note="HMMPfam hit to PF02768, DNA polymerase III, beta chain, score 4.9e-11" gene complement(3140..4102) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /db_xref="GeneID:6158670" CDS complement(3140..4102) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708797.1" /db_xref="GI:170780465" /db_xref="GeneID:6158670" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLARAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(3152..3694) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.1e-38" misc_feature complement(3779..3844) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(3844..3965) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(3965..4030) /locus_tag="CMS_0003" /old_locus_tag="CMS0003" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 4224..5111 /locus_tag="CMS_0004" /old_locus_tag="CMS0004" /db_xref="GeneID:6156010" CDS 4224..5111 /locus_tag="CMS_0004" /old_locus_tag="CMS0004" /note="similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase-like protein" /protein_id="YP_001708798.1" /db_xref="GI:170780466" /db_xref="GeneID:6156010" /translation="MHIGLVGLGKMGARMRARLEANGIEVTGYDTNPDVSDVATLDDL AAALPTPRLVWVMVPAGKVTQNVVGDLARILEPGDLVIDGGNSKFTDDFAHAGLLKDK GIDFVDAGVSGGVWGLENGYGLMVGGPVEQVQRAMPVFDALRPEGPREEGFVHVGDSG AGHYAKMVHNGIEYAMMQSFAEGYELLAARKDIIKDVTGTFEAWQRGTVVRSWLLELL VKALKEDPGFEDIEGFVQDSGEGRWTIEEALDNAVPMPAISASIFARFSSRQEDSPAM KAVAALRNQFGGHSVQKKS" misc_feature 4227..4697 /locus_tag="CMS_0004" /old_locus_tag="CMS0004" /inference="protein motif:HMMPfam:PF03446" /note="HMMPfam hit to PF03446, 6-phosphogluconate dehydrogenase, NAD-binding, score 1.3e-13" misc_feature 4701..5108 /locus_tag="CMS_0004" /old_locus_tag="CMS0004" /inference="protein motif:HMMPfam:PF00393" /note="HMMPfam hit to PF00393, 6-phosphogluconate dehydrogenase, C-terminal, score 5e-06" gene 5119..6345 /gene="recF" /locus_tag="CMS_0005" /old_locus_tag="CMS0005" /db_xref="GeneID:6156011" CDS 5119..6345 /gene="recF" /locus_tag="CMS_0005" /old_locus_tag="CMS0005" /note="Required for DNA replication; binds preferentially to single-stranded, linear DNA" /codon_start=1 /transl_table=11 /product="recombination protein F" /protein_id="YP_001708799.1" /db_xref="GI:170780467" /db_xref="GeneID:6156011" /translation="MIVRHLSLGDFRNYTRADVALLPGATLFVGSNGQGKTNLVEALG FLSTLGSHRVSTDQALVRQGAESAVIRALLQHAGRELRVEVQINRSAANRAQVNGTAT KTRELPRYFSSVLFAPEDLALVRGDPSGRRRLLDQLLVLRTPRLAGVLSDYDRALKQR NTLLKSARARGMKADQLSTLDIWDERLVAIGSQIIAARGALVESLQPELARAYLAVAG SDHGPSARPELSILADDPGEDDVADETGARDGGRFTRTEDVVPVFTAAIARMRPRELE RGLTLVGPHRDDVLFRLNGLPAKGYASHGESWSFALAIKLASAELLRRDSQTGDPVLI LDDVFAELDQARRGRLAEAVTGFEQVLITAAVFEDVPEHLAANAVHIRAGAIVESPTP ASASEPASPGEDGGAA" misc_feature 5119..5538 /gene="recF" /locus_tag="CMS_0005" /old_locus_tag="CMS0005" /inference="protein motif:HMMPfam:PF02463" /note="HMMPfam hit to PF02463, SMC protein, N-terminal,score 8.2e-06" misc_feature 5206..5229 /gene="recF" /locus_tag="CMS_0005" /old_locus_tag="CMS0005" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 6115..6168 /gene="recF" /locus_tag="CMS_0005" /old_locus_tag="CMS0005" /note="PS00618 RecF protein signature 2." gene 6342..6854 /locus_tag="CMS_0006" /old_locus_tag="CMS0006" /db_xref="GeneID:6156012" CDS 6342..6854 /locus_tag="CMS_0006" /old_locus_tag="CMS0006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708800.1" /db_xref="GI:170780468" /db_xref="GeneID:6156012" /translation="MIPRAPDGGPMPESEAVAVYRRFRRVFGDASVRSPSARKRREQK AGSSPFQPGRDPDSLGNVMDSLTSRMGWTSSLSQAELMAAWTTIAGEETAVHSSPVGI EDGLLTVECESTAWATQLRLMRVEITTRIAERFPDAGIRSIRFQGPNAPSWKKGPRSI PGRGPRDTYG" misc_feature 6396..6842 /locus_tag="CMS_0006" /old_locus_tag="CMS0006" /inference="protein motif:HMMPfam:PF05258" /note="HMMPfam hit to PF05258, Protein of unknown function DUF721, score 1.6e-20" gene 7095..9089 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /db_xref="GeneID:6156013" CDS 7095..9089 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /note="negatively supercoils closed circular double-stranded DNA" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_001708801.1" /db_xref="GI:170780469" /db_xref="GeneID:6156013" /translation="MEVEETHNDSDHITRQQVSNDYGANEIQVLEGLEAVRKRPGMYI GSTGPRGLHHLVSEIVDNSVDEALAGFASDIQITMRKDGGIRVVDDGRGIPVDIHPVE GISTVELVLTKLHAGGKFGGGGYAVSGGLHGVGSSVVNALSERLDVEVRRQGAVWRQS FTIGVPDAPLEKGEGSTETGTTITFWPSREIFETVEFDYDTLRARFQQMAFLNKGLAL TLHDEREEDGAEHRTEKFLYERGLVDYVEHLVKAKKTEVVNADVIAFESEDTVKKISL EVAMQWTTSYTESVHTYANTINTHEGGTHEEGFRAALTTLVNRYARENKLLREKDENL TGDDVREGLTAVISVKLGEPQFEGQTKTKLGNTEAKAYVQRIVGQQLGDWLEKNPSQA KDIIRKGMQASQARLAARKAREQTRRKGLLESGGMPGKLKDCQSKDPAFSEVFLVEGD SAGGSAVQGRNPTTQAILPLRGKILNVEKARLDRALQNNEVQSMITAFGAGIGEDFNA EKVRYHKIVLMADADVDGQHITTLLLTLLFRYMRPLIELGYVYLAQPPLYRLKWSNAE DQYVYTDAERDALLIHGQQNGKKLPKDNGIQRYKGLGEMDYKELWETTMDPATRTLMQ VTLDDAAGADEVFSTLMGEDVESRRSFIQRNAKDVRFLDI" misc_feature 7233..7664 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2.7e-28" misc_feature 7815..8339 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /inference="protein motif:HMMPfam:PF00204" /note="HMMPfam hit to PF00204, DNA topoisomerase II, score 5e-84" misc_feature 8430..8456 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /note="PS00177 DNA topoisomerase II signature." misc_feature 8508..8753 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /inference="protein motif:HMMPfam:PF01751" /note="HMMPfam hit to PF01751, TOPRIM, score 3.4e-10" misc_feature 8778..8804 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /note="PS00037 Myb DNA-binding domain repeat signature 1." misc_feature 8856..9053 /gene="gyrB" /locus_tag="CMS_0007" /old_locus_tag="CMS0007" /inference="protein motif:HMMPfam:PF00986" /note="HMMPfam hit to PF00986, DNA gyrase, subunit B,C-terminal, score 2.5e-41" gene 9172..11832 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /db_xref="GeneID:6156014" CDS 9172..11832 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /note="negatively supercoils closed circular double-stranded DNA" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /protein_id="YP_001708802.1" /db_xref="GI:170780470" /db_xref="GeneID:6156014" /translation="MADDNTPDDEQGTGATPDDDALPQEGVMPASAAASDSLPAAIVD PDARVVVTHDRIEQVDLQLEMQRSFLDYAMSVIVQRALPEVRDGLKPVHRRVIYAMYD GGYRPDRSFFKSARVVGEVMGQFHPHGDSSIYDALVRLVQPWSLRYPLALGQGNFGSA GNDGAAAPRYTETKMAPLAMEMVRDITEDTVDFQDNYDGRTLEPKILPSRFPNLLVNG SVGIAVGMATNIPPHNLREVAAGAQWLLAHPDANREELLEALLERIKGPDFPTGAQVL GTKGILEAYRTGRGSITMRAVVAVEEIQGRVCLVVTELPYQVNPDNLAIKIAELVKDG KLAGVADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGI PRTLALDGFISAWVDHQIDVIVRRTQYRLNEAEARAHILRGYLKALDALDDVIALIRR SETVEVARSGLMKLLDIDELQANAILEMQLRRLAALERQKIQDQAAELEQRIAEYKHI LATPTVQREIISTELQEITDKYGDDRRTEIMLGFDGDMSMEDLIPEEEMVVTVTRGGY IKRTRIDNYRSQHRGGKGVRGAQLRADDVVEHFFVTTTHHWLLFLTDKGRVYRAKAYE LQEAGRDAKGQHVANLLAMQPDEEIQQVLDIRDYQVAQYLVLATRDGLMKKTALTEYD TNRTGGIIAINLRDGDALVSALLVDEDDDLLLVSRKGMSLRFSADNQALRPMGRSTSG VKGMTFRGDDTLLSASVVGEQGYVFVVTEGGFAKRTAADQYRVQNRGGMGIKVAKLQD ARGDLAGALIVGEEDEILVVLASGKVVRSVVAEVPAKGRDTMGVVFARFADDDRIISL AKNSERNLVVPEAAPDASDGTAAGKGTPDE" misc_feature 9409..10764 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF00521" /note="HMMPfam hit to PF00521, DNA gyrase/topoisomerase IV, subunit A, score 4.9e-270" misc_feature 10834..10983 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 1.1e-15" misc_feature 10984..11142 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 2.6e-11" misc_feature 11152..11295 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 1.3e-11" misc_feature 11296..11451 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 2.3e-11" misc_feature 11452..11604 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 3.2e-12" misc_feature 11605..11754 /locus_tag="CMS_0008" /old_locus_tag="CMS0008" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 2.7e-07" gene 11825..12232 /locus_tag="CMS_0009" /old_locus_tag="CMS0009" /db_xref="GeneID:6156015" CDS 11825..12232 /locus_tag="CMS_0009" /old_locus_tag="CMS0009" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708803.1" /db_xref="GI:170780471" /db_xref="GeneID:6156015" /translation="MSSVAEKLAKKSSRATTTKQVRLKLVYVDFWSALKLAFLFSVVL GIITVVATFLIYVVLQTTNVFGTVDQLFQEVSGSADFSLQDVFGLGQVLGFAIVVAVL NIVVGTVLGAVAALLYNLSVRITGGVLVGFTNA" misc_feature order(11933..12001,12107..12175) /locus_tag="CMS_0009" /old_locus_tag="CMS0009" /note="2 probable transmembrane helices predicted for CMS0009 by TMHMM2.0 at aa 37-59 and 95-117" gene 12281..12354 /locus_tag="CMS_r021" /old_locus_tag="CMSr021" /db_xref="GeneID:6156016" tRNA 12281..12354 /locus_tag="CMS_r021" /old_locus_tag="CMSr021" /product="tRNA-Ile" /note="codon recognized: AUC; tRNA Ile anticodon GAT, Cove score 87.48" /anticodon=(pos:12315..12317,aa:Ile) /db_xref="GeneID:6156016" gene 12438..12510 /locus_tag="CMS_r007" /old_locus_tag="CMSr007" /db_xref="GeneID:6159044" tRNA 12438..12510 /locus_tag="CMS_r007" /old_locus_tag="CMSr007" /product="tRNA-Ala" /note="codon recognized: GCA; tRNA Ala anticodon TGC, Cove score 83.81" /anticodon=(pos:12471..12473,aa:Ala) /db_xref="GeneID:6159044" gene complement(12684..13322) /locus_tag="CMS_0010" /old_locus_tag="CMS0010" /db_xref="GeneID:6159026" CDS complement(12684..13322) /locus_tag="CMS_0010" /old_locus_tag="CMS0010" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708804.1" /db_xref="GI:170780472" /db_xref="GeneID:6159026" /translation="MEVPLGLSRKNKKELAKLRTHAAAVLKEQREVLDRANVVVAEAA HTARKLSDQHVVPAVKRGVDDHIRPSYEAGAERVRAAADSAYKGFTHTVLPAVAGAAG SAVAATEGIRNSKQVQDAVKKAGKVSSKAQEFGKHYVDNGRSYVGRYVPQVAPAKKGL GFGGVALIALGVVVVGGVGYALYQTFRADDDLWIADDEPEAVDATAKDQPAS" misc_feature complement(12774..12842) /locus_tag="CMS_0010" /old_locus_tag="CMS0010" /note="1 probable transmembrane helix predicted for CMS0010 by TMHMM2.0 at aa 161-183" gene 13432..13971 /gene="cypB" /locus_tag="CMS_0011" /old_locus_tag="CMS0011" /db_xref="GeneID:6156017" CDS 13432..13971 /gene="cypB" /locus_tag="CMS_0011" /old_locus_tag="CMS0011" /EC_number="5.2.1.8" /codon_start=1 /transl_table=11 /product="putative peptidyl-prolyl cis-trans isomerase" /protein_id="YP_001708805.1" /db_xref="GI:170780473" /db_xref="GeneID:6156017" /translation="MSAHTHVATMTTNHGTIVLNLFGSHAPQTVENFVGLTTGEKEWT HPQTGKKSTDPLYDGVVFHRIIKDFMLQGGDPLGQGTGGPGYQFDDEISRDLDFSKPY ILAMANAGTQGGRGTNGSQFFITTAPTTWLQGKHTIFGEVADDASKKVVDALNAVPTD GRDRPREDVVIESVTVEKV" misc_feature 13450..13962 /gene="cypB" /locus_tag="CMS_0011" /old_locus_tag="CMS0011" /inference="protein motif:HMMPfam:PF00160" /note="HMMPfam hit to PF00160, Peptidyl-prolyl cis-trans isomerase, cyclophilin type, score 1.1e-57" misc_feature 13600..13653 /gene="cypB" /locus_tag="CMS_0011" /old_locus_tag="CMS0011" /note="PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature." gene 13971..14834 /gene="yggP" /locus_tag="CMS_0012" /old_locus_tag="CMS0012" /db_xref="GeneID:6158648" CDS 13971..14834 /gene="yggP" /locus_tag="CMS_0012" /old_locus_tag="CMS0012" /codon_start=1 /transl_table=11 /product="rhomboid family membrane protein" /protein_id="YP_001708806.1" /db_xref="GI:170780474" /db_xref="GeneID:6158648" /translation="MTDSPRTAADRCYRHPDRQSFVLCQRCGRTICPECQTPAAVGVI CPEDMKEQRRTAPRSRASFVTRMTRSSAPVVTYGIMAVCAVVWILQVLPVVGDYVTTS LWFAPVYGSVASGDYEPWRMLTSAFTHSPSSILHIVFNMLSVFVFGRVLEPMLGRARF LALFLISALGGSLAVEVIGSAMGEPLQAVVGASGAIFGLMGGYFVLARKLGGNVGPLL GIIAINLLLGFVVQGVSWQAHVGGLVTGALVAIVLLRTRDARQRGAQIGSLAGLTVAI LIAGAVFPVGL" misc_feature order(14190..14258,14346..14414,14451..14519,14532..14591, 14610..14663,14673..14732,14766..14825) /gene="yggP" /locus_tag="CMS_0012" /old_locus_tag="CMS0012" /note="7 probable transmembrane helices predicted for CMS0012 by TMHMM2.0 at aa 74-96, 126-148, 161-183,188-207, 214-231, 235-254 and 266-285" misc_feature 14310..14744 /gene="yggP" /locus_tag="CMS_0012" /old_locus_tag="CMS0012" /inference="protein motif:HMMPfam:PF01694" /note="HMMPfam hit to PF01694, Rhomboid-like protein,score 1.5e-31" gene complement(15229..15468) /locus_tag="CMS_0013" /old_locus_tag="CMS0013" /db_xref="GeneID:6159105" CDS complement(15229..15468) /locus_tag="CMS_0013" /old_locus_tag="CMS0013" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708807.1" /db_xref="GI:170780475" /db_xref="GeneID:6159105" /translation="MARDKTTRPSRQERVHDEDAPNPVWFKPIMFGFMLVGLAWLIVY YVSLNAFPIPDLGVGNILIGFGLILVGFLMTTRWR" misc_feature complement(15232..15468) /locus_tag="CMS_0013" /old_locus_tag="CMS0013" /inference="protein motif:HMMPfam:PF06781" /note="HMMPfam hit to PF06781, Protein of unknown function UPF0233, score 7.3e-28" misc_feature complement(order(15250..15303,15331..15399)) /locus_tag="CMS_0013" /old_locus_tag="CMS0013" /note="2 probable transmembrane helices predicted for CMS0013 by TMHMM2.0 at aa 24-46 and 56-73" gene 15550..16374 /gene="srtA" /locus_tag="CMS_0014" /old_locus_tag="CMS0014" /db_xref="GeneID:6156018" CDS 15550..16374 /gene="srtA" /locus_tag="CMS_0014" /old_locus_tag="CMS0014" /codon_start=1 /transl_table=11 /product="sortase" /protein_id="YP_001708808.1" /db_xref="GI:170780476" /db_xref="GeneID:6156018" /translation="MCAAYNRHMSAQDPAPSRRATRRRGRRGDALLGTIGVLGELLLT AGVLIMLFLGWQLWFNDIVVSSGQRDQALENSRSWATAAPDAAASPDPAASPAAPGDP VITTAPSSDATDFGNIYIPRFGSDYVVPVATGVGLGNVLNLGKIGHYRETQMPGQVGN FAVAAHRTTYGKPFNQITDLRVGDAIVVETQDGWYTYRFRTLEYVKPTGVDVLDEVPQ APDAQPGDRILTMTSCNPLFSAAERVVAYSVFESWQPRSDASTPAALAGTSFAKAG" misc_feature 15640..15708 /gene="srtA" /locus_tag="CMS_0014" /old_locus_tag="CMS0014" /note="1 probable transmembrane helix predicted for CMS0014 by TMHMM2.0 at aa 31-53" misc_feature 15901..16302 /gene="srtA" /locus_tag="CMS_0014" /old_locus_tag="CMS0014" /inference="protein motif:HMMPfam:PF04203" /note="HMMPfam hit to PF04203, Peptidase C60, sortase A and B, score 2.4e-26" gene 16377..16535 /locus_tag="CMS_0015" /old_locus_tag="CMS0015" /db_xref="GeneID:6158996" CDS 16377..16535 /locus_tag="CMS_0015" /old_locus_tag="CMS0015" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708809.1" /db_xref="GI:170780477" /db_xref="GeneID:6158996" /translation="MYAAFWRILPGPVWIRLLIVLVLLAAVLFSLVTWVFPWVDSIVN TQEVTVHQ" sig_peptide 16377..16511 /locus_tag="CMS_0015" /old_locus_tag="CMS0015" /note="Signal peptide predicted for CMS0015 by SignalP 2.0 HMM (Signal peptide probability 0.690) with cleavage site probability 0.607 between residues 45 and 46" misc_feature 16413..16481 /locus_tag="CMS_0015" /old_locus_tag="CMS0015" /note="1 probable transmembrane helix predicted for CMS0015 by TMHMM2.0 at aa 13-35" gene 16532..17170 /locus_tag="CMS_0016" /old_locus_tag="CMS0016" /db_xref="GeneID:6156019" CDS 16532..17170 /locus_tag="CMS_0016" /old_locus_tag="CMS0016" /codon_start=1 /transl_table=11 /product="putative glutamine amidotransferase" /protein_id="YP_001708810.1" /db_xref="GI:170780478" /db_xref="GeneID:6156019" /translation="MTRVLVIDNYDSFVYTLNGYLQQLGAETVVMRNDDHAEADMAGV ISEYDAVLVSPGPGKPSEAGVSIPTVTAALASGTPLLGVCLGHQAIAEAFGATVTNAE ELMHGKTSLVTHDDGDFYLGVPQPFTATRYHSLAVVDGTVPSDLVVTSRTEGGVIMGL RHESAPIVGVQFHPESVLTEGGYRMLGNWLEGAGLTGARDTSSRLSPLVRVA" misc_feature 16544..17110 /locus_tag="CMS_0016" /old_locus_tag="CMS0016" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 5.9e-69" misc_feature 16766..16801 /locus_tag="CMS_0016" /old_locus_tag="CMS0016" /note="PS00442 Glutamine amidotransferases class-I active site." gene complement(17264..19012) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /db_xref="GeneID:6156020" CDS complement(17264..19012) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /codon_start=1 /transl_table=11 /product="putative serine/threonine protein kinase" /protein_id="YP_001708811.1" /db_xref="GI:170780479" /db_xref="GeneID:6156020" /translation="MTDTRVLGGRYEVGALLGRGGMADVFEGVDSRLGRRVAVKVLRR GLAEDPAFRSRFRQEAQAAARMSHPTIVRVFDAGEDVVTDQDGASHTTPFIVMERVEG RLLKDVITDGPLDPDEAVRIMGQVLTALEYSHRAGVVHRDIKPGNIMVTPAGQVKVMD FGIARAVSDTSATIAQTTAILGTARYFSPEQAKGESVDARTDLYSAGVVLFEMLTGQA PFRADTAVAVAYQHVSETPVAPSTVQEAVSLQLDQVVLHAMAKDRYARFQTAGDFRTD LDRAAAGTLAPREAPTNDVGATLFGAPAGPSSSQQALRQLGVDDDRTVRTQSRPPVPW IWAGVTVVVVILIAVVIWVTSLSSIAPPDISPTVPDVAGSTYSSAAAALEEADLVPLE REEASTSVAEGIVLRTNPDPGENVAAKTEIDVFVSSGPPEVQVPNLMNLDEGTATANL EAVGLKVGEVIRQSSPTVPDGLVMQTDPASSQQVDQGSAVKLILSNGKVVLPDVLGQP LVDAQKLLEASDLVVTTRRDPSCSRADGSPVSQQSVPPGDVAQRSTVGLTYCTGAVRS TSAPTTGTPTPDPARG" misc_feature complement(17330..17524) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 1.7e-05" misc_feature complement(17525..17722) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 5e-10" misc_feature complement(17729..17917) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 8e-13" misc_feature complement(17951..18019) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /note="1 probable transmembrane helix predicted for CMS0017 by TMHMM2.0 at aa 332-354" misc_feature complement(18182..18982) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 8.7e-55" misc_feature complement(18563..18601) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /note="PS00108 Serine/Threonine protein kinases active-site signature." misc_feature complement(18893..18964) /locus_tag="CMS_0017" /old_locus_tag="CMS0017" /note="PS00107 Protein kinases ATP-binding region signature." gene complement(19147..21045) /gene="pknA" /locus_tag="CMS_0018" /old_locus_tag="CMS0018" /db_xref="GeneID:6156021" CDS complement(19147..21045) /gene="pknA" /locus_tag="CMS_0018" /old_locus_tag="CMS0018" /codon_start=1 /transl_table=11 /product="serine/threonine kinase" /protein_id="YP_001708812.1" /db_xref="GI:170780480" /db_xref="GeneID:6156021" /translation="MRPTSGLTFGGRYQLGDRIAIGGMGEVWEATDLVIGRKVAIKIL KDEYLGDPGFLERFRAEARHAALVNHEGIANVFDYGEEDGSAFLVMELVPGEALSTIL ERERVLSTDKVLDIISQTALALHAAHQAGLVHRDIKPGNLLITPDGRVKITDFGIARI ADQVPLTATGQVMGTVQYLSPEQASGHPASPSTDVYSMGIVAYECLAGRRPFTGESQV AIAMAQINEQPPELPVTVAEPVRNLVMSCIAKKPADRPQSAAHLARAAQALRRGDVAT ATIAVAAVAGAAALADPGTPTQATQLMPSGRRAADTGATTVLSSSAPRAGAADPFLLD DPDDEEPEEPRARKRAIWIFVVVAILVVAAIVAGLLAYFGSRDADAPTPAATETSASP SPSASPSPTPTPSPTASTVDVNRDDYIGRDQKTVTGELTALGLKVTVVTGSAAPSGDQ EGRVTAITPTGSVAKGATIQITAYGPPTLPTAAPGTPTVTPTDVRAGQTVDISWPAYS CPAGQTLNGYQVQADSVSQGASGTWGGSTNPTNAQTTSGEIKVGTNPGTFTVKYLAIC GTNESPYSSTVTVTVEAAPGGSGEGTGGGTGGGTGGGNGGTTGMAPTPAPGRTDERSL VSSSHRNP" misc_feature complement(19927..19995) /gene="pknA" /locus_tag="CMS_0018" /old_locus_tag="CMS0018" /note="1 probable transmembrane helix predicted for CMS0018 by TMHMM2.0 at aa 351-373" misc_feature complement(20230..21009) /gene="pknA" /locus_tag="CMS_0018" /old_locus_tag="CMS0018" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 4.8e-50" misc_feature complement(20614..20652) /gene="pknA" /locus_tag="CMS_0018" /old_locus_tag="CMS0018" /note="PS00108 Serine/Threonine protein kinases active-site signature." gene complement(21042..22493) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /db_xref="GeneID:6158870" CDS complement(21042..22493) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /codon_start=1 /transl_table=11 /product="putative secreted penicillin-binding protein" /protein_id="YP_001708813.1" /db_xref="GI:170780481" /db_xref="GeneID:6158870" /translation="MNRELKRVSVFVLAMFVALFVAASVIQVVSAPTLQADPRNSRTI IASYSAERGSILVDGTPIASSVPVDDRYKFLRTYAQPDLYSAVTGYYTLGQGSTGLED SMNDVLSGTSGTQFFDSLTRTFTGQDPKGASVELTIDPKVQQAAYDALGSLQGSVVAI EPKTGRILAMVSKPGYDPNTLASHDRAAVQQSYSSLLADPSNPLINRAVNSLNPPGST FKLITAAAAIESGQYTPDSLLPNPPTFTLPGTGTVITNAGEGACGPEAEVSIATALRL SCNIPFAQLGIALGSEKIAAMADAFGYGKSIDVPLASAKSVFSPDLDDAQTAQSAFGQ LDVRATPLQTAMVTAGIANGGEVMKPSVVDSVLNPDLSELSGFSPSRFADPISKETAA TMTRMMIDDVQTGVASNARISGVDVAGKTGTAQNGSDDPYTLWFTGFAPADAPKVAVA VLVEDGGGRGRSGSGNTLAAPVAKKVIEAVLDR" sig_peptide complement(21042..21149) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /note="Signal peptide predicted for CMS0019 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.812 between residues 36 and 37" misc_feature complement(21060..22031) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /inference="protein motif:HMMPfam:PF00905" /note="HMMPfam hit to PF00905, Penicillin-binding protein,transpeptidase, score 6.2e-77" misc_feature complement(21231..21254) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(21738..21755) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature complement(22407..22475) /locus_tag="CMS_0019" /old_locus_tag="CMS0019" /note="1 probable transmembrane helix predicted for CMS0019 by TMHMM2.0 at aa 7-29" gene complement(22490..23815) /locus_tag="CMS_0020" /old_locus_tag="CMS0020" /db_xref="GeneID:6156022" CDS complement(22490..23815) /locus_tag="CMS_0020" /old_locus_tag="CMS0020" /codon_start=1 /transl_table=11 /product="FtsW/RodA/SpoVE family cell cycle protein" /protein_id="YP_001708814.1" /db_xref="GI:170780482" /db_xref="GeneID:6156022" /translation="MPRRLRNLELALVVLASVINGGALYLVQLGVLGAFDQSFFIPAT GLAVLVLGMHVALRWLAPDADPFILPIATVLNGLGIAAIYRLDLAAGLSGWDSVAVRQ IVWSGLAIVCALAVIVLLKNHRVLQRYRYIAMFVGLILLLLPMLPVLGQNINGARVWI HIGGFSFQPGEIAKICLAVFFAGYLVTARDSLSMVGVKVLGMRFPRVRDLGPILLVWA VSMSVLVFQRDLGTSLLYFGLFIVMTYVSTGRIGWVVLGLVLFLGGAYGASTLGYVGG RVDAWLKPFDPAVYDANGGSYQLVTGLFGMADGGLFGRGLGEGMPNLTPLANSDFILA SLGEELGLTGVFAILALYLLLVSRGFRIGFAGQDDFGKLLGIGLSFVIALQVFIVIGG VTRVIPLTGLTTPFMAAGGSSLLANWIIAALLLRLSDTVRNQPRLVVES" sig_peptide complement(22490..22591) /locus_tag="CMS_0020" /old_locus_tag="CMS0020" /note="Signal peptide predicted for CMS0020 by SignalP 2.0 HMM (Signal peptide probability 0.928) with cleavage site probability 0.694 between residues 34 and 35" misc_feature complement(22517..23620) /locus_tag="CMS_0020" /old_locus_tag="CMS0020" /inference="protein motif:HMMPfam:PF01098" /note="HMMPfam hit to PF01098, Cell cycle protein, score 1.4e-69" misc_feature complement(order(22532..22600,22628..22696,22730..22798, 22988..23056,23075..23128,23138..23197,23258..23326, 23369..23422,23456..23524,23552..23620,23633..23701, 23729..23797)) /locus_tag="CMS_0020" /old_locus_tag="CMS0020" /note="12 probable transmembrane helices predicted for CMS0020 by TMHMM2.0 at aa 7-29, 39-61, 66-88, 98-120,132-149, 164-186, 207-226, 230-247, 254-276, 340-362,374-396 and 406-428" gene complement(23880..25142) /locus_tag="CMS_0021" /old_locus_tag="CMS0021" /db_xref="GeneID:6156023" CDS complement(23880..25142) /locus_tag="CMS_0021" /old_locus_tag="CMS0021" /codon_start=1 /transl_table=11 /product="putative protein phosphatase" /protein_id="YP_001708815.1" /db_xref="GI:170780483" /db_xref="GeneID:6156023" /translation="MTTVTQAAAVSHVGKVRSNNQDSGYAGRDLFVVADGMGGHAGGD VASAVALTRIVEADKPYASAHDAEFALQAGLVAANQLLAETVFEHSELTGMGTTVSAL ARVGRHVAIAHIGDSRIYLFRRGELSQISADHTFVQRLVDSGRITPEEALVHPRRSVL MRVLGDVDAAPEVDTQVLDTHTGDRWLLCSDGLSSYVSEERITEILAAAGTPDTVADA LVKESLDHGAPDNVTVVVVDVLDEDDETAASRPAPEPVLVGSAAQPLAFGDEPAKRAV RIPSLLLHPLRATTAARDAQFEPESDQYLEALIAEDKRRALRRRVTWLVGVALILAGL VLACVLGYRWTQSRYYVGEADGTVAVYNGVQQTIGPIELSHVYARTEVRVDDLQPFYR QQVEQTINADSLAGAEEIVNRLQEAAGG" misc_feature complement(24108..24176) /locus_tag="CMS_0021" /old_locus_tag="CMS0021" /note="1 probable transmembrane helix predicted for CMS0021 by TMHMM2.0 at aa 323-345" misc_feature complement(24129..24161) /locus_tag="CMS_0021" /old_locus_tag="CMS0021" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature complement(24447..25127) /locus_tag="CMS_0021" /old_locus_tag="CMS0021" /inference="protein motif:HMMPfam:PF00481" /note="HMMPfam hit to PF00481, Protein phosphatase 2C-like, score 2.2e-06" gene complement(25147..25728) /locus_tag="CMS_0022" /old_locus_tag="CMS0022" /db_xref="GeneID:6156024" CDS complement(25147..25728) /locus_tag="CMS_0022" /old_locus_tag="CMS0022" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001708816.1" /db_xref="GI:170780484" /db_xref="GeneID:6156024" /translation="MTELTLLVLRLAFLAVLWLFIFGIVYALRSDLFGQRVRKLREET GTAGGSPFPQSPYAAAAAPPRSPQPGVQPPPISSMPSGANSGAVPSRAKATTATARHL VITSGAKAGTEIPLGTEPLTIGRSSESGLVIRDDYTSTHHARLLLWNDEWMIQDLDST NGTFLDGKRVSVPTQVPLDTPIRIGATSFELRR" sig_peptide complement(25147..25233) /locus_tag="CMS_0022" /old_locus_tag="CMS0022" /note="Signal peptide predicted for CMS0022 by SignalP 2.0 HMM (Signal peptide probability 0.675) with cleavage site probability 0.332 between residues 29 and 30" misc_feature complement(25174..25368) /locus_tag="CMS_0022" /old_locus_tag="CMS0022" /inference="protein motif:HMMPfam:PF00498" /note="HMMPfam hit to PF00498, Forkhead-associated, score 1.3e-07" misc_feature complement(25642..25710) /locus_tag="CMS_0022" /old_locus_tag="CMS0022" /note="1 probable transmembrane helix predicted for CMS0022 by TMHMM2.0 at aa 7-29" gene complement(25725..26456) /locus_tag="CMS_0023" /old_locus_tag="CMS0023" /db_xref="GeneID:6156025" CDS complement(25725..26456) /locus_tag="CMS_0023" /old_locus_tag="CMS0023" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708817.1" /db_xref="GI:170780485" /db_xref="GeneID:6156025" /translation="MGILDNFEKGLERAVNGAFVKTFKSGLQPVEIAAQLRRELDTHA AVVDRDLILVPNSFTLRVSRADAERMASIGTALTDQLRQAVEKHASSQGYQFAGVVQV GFREDDAISEGVLEIDSRTAEGSVTWMPVVDVAGARHPLPVGRTVIGRGSDADITVDD PGTSRRHVEIAWDGTRAQVRDLGSTNGSELNGAPVTKAPLPPESVIRIGRTAITFRVV PQATEERGGRDTRGQRHDDGFWGAS" misc_feature complement(25830..26021) /locus_tag="CMS_0023" /old_locus_tag="CMS0023" /inference="protein motif:HMMPfam:PF00498" /note="HMMPfam hit to PF00498, Forkhead-associated, score 5.9e-14" gene 26632..26715 /locus_tag="CMS_r032" /old_locus_tag="CMSr032" /db_xref="GeneID:6156026" tRNA 26632..26715 /locus_tag="CMS_r032" /old_locus_tag="CMSr032" /product="tRNA-Leu" /note="codon recognized: CUG; tRNA Leu anticodon CAG, Cove score 58.28" /anticodon=(pos:26666..26668,aa:Leu) /db_xref="GeneID:6156026" gene 26835..30200 /locus_tag="CMS_0024" /old_locus_tag="CMS0024" /pseudo /db_xref="GeneID:6159045" misc_feature order(27009..27077,27090..27149,27183..27251,27294..27350, 27369..27428,27441..27509,27528..27587,27630..27698, 27711..27779,27837..27896) /locus_tag="CMS_0024" /old_locus_tag="CMS0024" /note="10 probable transmembrane helices predicted for CMS0024 by TMHMM2.0 at aa 59-81, 86-105, 117-139, 154-172,179-198, 203-225, 232-251, 266-288, 293-315 and 335-354" /pseudo misc_feature 27951..28403 /locus_tag="CMS_0024" /old_locus_tag="CMS0024" /inference="protein motif:HMMPfam:PF04329" /note="HMMPfam hit to PF04329, Protein of unknown function DUF470, score 2.9e-15" /pseudo misc_feature 28647..28949 /locus_tag="CMS_0024" /old_locus_tag="CMS0024" /inference="protein motif:HMMPfam:PF04331" /note="HMMPfam hit to PF04331, Protein of unknown function DUF472, score 5.6e-12" /pseudo gene complement(29064..30026) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /db_xref="GeneID:6156027" CDS complement(29064..30026) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /note="P" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708818.1" /db_xref="GI:170780486" /db_xref="GeneID:6156027" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(29076..29618) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(29703..29768) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(29768..29889) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(29889..29954) /locus_tag="CMS_0025" /old_locus_tag="CMS0025" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 30197..30883 /locus_tag="CMS_0026" /old_locus_tag="CMS0026" /db_xref="GeneID:6156028" CDS 30197..30883 /locus_tag="CMS_0026" /old_locus_tag="CMS0026" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001708819.1" /db_xref="GI:170780487" /db_xref="GeneID:6156028" /translation="MIEAAGAVDGSSSAEAVVSVVVIDDESLVRSGIAMVLGASPRIA VRAAVSSDTAVATVREHAPDVVLLDIRMPAPDGLTILAELMAEPRPPAVAMLTTFDTD DQVLEALHRGASGFLLKDTDPEQLARHVLTLASGGIVLAPGLRPGRLFRSREDDAERA RVARLGDRELVVLKALARGLSNAEIVAASGLTLGTVKETVSSIVQALGVRTRVEAAVV ADRAGLVPRR" misc_feature 30248..30610 /locus_tag="CMS_0026" /old_locus_tag="CMS0026" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 3.9e-27" misc_feature 30680..30853 /locus_tag="CMS_0026" /old_locus_tag="CMS0026" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 1.7e-06" gene 30897..32057 /locus_tag="CMS_0027" /old_locus_tag="CMS0027" /db_xref="GeneID:6156029" CDS 30897..32057 /locus_tag="CMS_0027" /old_locus_tag="CMS0027" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001708820.1" /db_xref="GI:170780488" /db_xref="GeneID:6156029" /translation="MSGRAPASGDATDPDALDATAPGVRPAAARARAALVDLLVAGIA TALSSGFLSASQSSGEVAAGIAACLGLLLRRRWPWLSVLAALPAFSVSIAYVPLMIAL FDLGLSRAPRWQVTVAAGASLVAYMAPLWPPEDVQFLIEPLVDASIYTVGPALLGAFL RERRTAAAQLRELREAQTLGQLQAAEVALARERAVLAREMHDVVSHQVSLIAVQAGAM QVGAADEPSREAARTIRALSTVTLEELRGMVEVLRAAGGERRELAPQPTLQDVPALVA ASGISVETEIDLPADLSAAAQRAVYRTVQEGLTNARKHATGAPVRITGRLDAGHVVLE VEAGRATLPLLDLPSGRHGLTGLRERAQLLGGSLAAETRADGSHLLRLRFPL" misc_feature order(31047..31115,31134..31202) /locus_tag="CMS_0027" /old_locus_tag="CMS0027" /note="2 probable transmembrane helices predicted for CMS0027 by TMHMM2.0 at aa 51-73 and 80-102" misc_feature 31470..31667 /locus_tag="CMS_0027" /old_locus_tag="CMS0027" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature 31779..32051 /locus_tag="CMS_0027" /old_locus_tag="CMS0027" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 0.00081" gene complement(32088..32669) /locus_tag="CMS_0028" /old_locus_tag="CMS0028" /db_xref="GeneID:6156030" CDS complement(32088..32669) /locus_tag="CMS_0028" /old_locus_tag="CMS0028" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708821.1" /db_xref="GI:170780489" /db_xref="GeneID:6156030" /translation="MIVVVIIACEIGFWAVLAAGLAVRYVLRRPRLGAVLLACVPVVD LVLLVAATIDLRGGATADWTHGLAAAYLGGSVAFGHSMVRWLDVRFAHRFAGGPAPVR PLRSGRARVRHEWRLWILTVVAYTIACALLLAAIAFVGDPARTGALGDWLGRLTVLLG ICTVWAVAWTIWPGPEPATDAEPATVSSSTAGR" misc_feature complement(order(32151..32219,32253..32321,32412..32471, 32505..32573,32601..32669)) /locus_tag="CMS_0028" /old_locus_tag="CMS0028" /note="5 probable transmembrane helices predicted for CMS0028 by TMHMM2.0 at aa 12-34, 44-66, 78-97, 128-150 and 162-184" gene complement(32763..32885) /gene="rpmJ" /locus_tag="CMS_0029" /old_locus_tag="CMS0029" /db_xref="GeneID:6156031" CDS complement(32763..32885) /gene="rpmJ" /locus_tag="CMS_0029" /old_locus_tag="CMS0029" /note="smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="YP_001708822.1" /db_xref="GI:170780490" /db_xref="GeneID:6156031" /translation="MKVRNSIKALKKLPGAQVVRRRGRVFVINKQNPRNKARQG" misc_feature complement(32766..32885) /gene="rpmJ" /locus_tag="CMS_0029" /old_locus_tag="CMS0029" /inference="protein motif:HMMPfam:PF00444" /note="HMMPfam hit to PF00444, Ribosomal protein L36,score 3.4e-05" gene 32960..34003 /locus_tag="CMS_0030" /old_locus_tag="CMS0030" /db_xref="GeneID:6156032" CDS 32960..34003 /locus_tag="CMS_0030" /old_locus_tag="CMS0030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708823.1" /db_xref="GI:170780491" /db_xref="GeneID:6156032" /translation="MYPQPPSGVVLVVGEGSGLRSVLRDAVDDVAGTLLVLPAEEADP VEPIARFLDDLAGRGPGVEAVVGIPATADVRATGMQLDLLLRREHELRRASGGSGSGF GLRHVVSVVAADRLHSIAFGRVEDAFDEAETLADLVEYATVVVLTGMARVPPESRGTL LALVRRLAPRAAVLDARRPLALDRLPRWGDVAGLAASAGWMRELTAAGVASRPGEVDR LDGPVGSVVVGDPRPLHPERLALAVEEELRPDRAGLVLRSKGFVSLASRPGEVGGWSS VGSMLTLQPTGIDPWQEGAPHGTEIAFFGVGLRPAVLRRAIGRAVLTGEELAAGPAEW AGYADPFPRVVAD" misc_feature 33626..33922 /locus_tag="CMS_0030" /old_locus_tag="CMS0030" /inference="protein motif:HMMPfam:PF07683" /note="HMMPfam hit to PF07683, Cobalamin synthesis protein cobW C-terminal domain, score 1.2e-13" gene 34092..35954 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /db_xref="GeneID:6156033" CDS 34092..35954 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /EC_number="3.6.1.-" /note="May have alternative downstream translational start site." /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="YP_001708824.1" /db_xref="GI:170780492" /db_xref="GeneID:6156033" /translation="MSACARLVTARPAAFSGEVKQNRTAAGTTRSTRTTTRTAHDRAP DGRTPDERPAAGDPAIVPEPAPGPEPEDAIRVARESFGWDRLHDGQVRTIGPLVRGRD ALVVMPTGYGKSAIYQVATVLMDGLTVVVSPLIALQADQVQNLEDAPAAPPARVINST IRGTALEEAWATVEEPGARIVFLTPEQLARDEVVARLVARGVALVVIDEAHCVASWGH DFRPDYLGLGGVIDALGHPPTVAMTATGSTPVRTEVEERLGLRDPFVLSSGFDRPNIR LEVRRHTEESEKRRAIVAHVMEQTQPGLVYVATRKDAEDYADEIRVAGLRVDAYHAGL PAAERERVQTAFHEDDVDVVVATSAFGMGIDKPTVRYVIHASPPESVDAYYQEVGRAG RDGEPAVGILHYRAEDLGLRRYFAARTPRPASLRDVYAAVAVAGVDGPVRPAAVAERA GMSARTVGGVLGLLVDAGVLGSDRDGAFVREELDPREAASRAKGVAQERERVEVSRLD MMRGYAEAPQCRRQFLLGYFGEESPERCGNCDACDRLEEEDAHEEAMGATDGGSPVAS DEMFPAQSQVTHAEWGPGTVMSTEDDRITVFFETEGYRVLSRRLVEEGSLLQPA" misc_feature 34347..34853 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 4e-26" misc_feature 34698..34727 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /note="PS00690 DEAH-box subfamily ATP-dependent helicases signature." misc_feature 35046..35276 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 8.6e-28" misc_feature 35412..35477 /gene="recQ" /locus_tag="CMS_0031" /old_locus_tag="CMS0031" /note="Predicted helix-turn-helix motif with score 1042.000, SD 2.74 at aa 441-462, sequence VRPAAVAERAGMSARTVGGVLG" gene complement(36065..37267) /locus_tag="CMS_0032" /old_locus_tag="CMS0032" /db_xref="GeneID:6158925" CDS complement(36065..37267) /locus_tag="CMS_0032" /old_locus_tag="CMS0032" /note="PS00134 Serine proteases, trypsin family, histidine active site." /codon_start=1 /transl_table=11 /product="putative serine protease" /protein_id="YP_001708825.1" /db_xref="GI:170780493" /db_xref="GeneID:6158925" /translation="MILGVTSLSPAFGETRQQAAVEQPVAAPVSDAAAEAIDAAHIAE QTGRPVEEVRAEQHRDVLFGQALASLQGVDGFANAGKDATGPGYWVAFTAPVAAAALA PLGELAPDVRTTTDAPLTAVERSTAVAAAAQAVQAELGAESVEASMSEDGTTVTAAAV LPDASASASVDVTSAAQAATDQAEAAVAQATTVPVEVALTDEDPSQEVLSGGTALGIG ATQQLACTAGFTVRNARTGATGLITASHCPDNLNYESRQILTFEGHGDSGQLDEQWFS SSEGVHNEFISQKAGSTLIRRKATAVATPFVGMNVCKYGTVTAYGCSQVINGPTTTVN ANGVTYANLWQVDGYITEAGDSGGPWYYGNTAYGIHYGDIPRGGASRSAFTSITAIEA ATDLRVLR" misc_feature complement(36527..36544) /locus_tag="CMS_0032" /old_locus_tag="CMS0032" /note="PS00134 Serine proteases, trypsin family, histidine active site." gene 37602..41009 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /db_xref="GeneID:6156034" CDS 37602..41009 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /note="Contains N- and C-terminal hydrophobic regions, 9x YD repeat and putative sortase recognition site." /codon_start=1 /transl_table=11 /product="putative sortase-processed secreted protein" /protein_id="YP_001708826.1" /db_xref="GI:170780494" /db_xref="GeneID:6156034" /translation="MRVPRVFRRQNAGNIRCTIAMIATSAVMITGLGAMPASAETAAG LVQFEDQTQDPAVINKQMQDEAQKAAKAAVWTPGTIPAEPADADKPAPELPQWKVPNP DRKLGQAVSTQRVPAGTPVGAPGLGALPYMSFEDISLSDDTVARVNLANGNLLLTAND GTSSAAGIGVRADRYYNGLSSSAGALGGGWSSVMSNVDFGLSVNSGETEATFVGPTGF SAKYTKNSAGAWVAPAGFNASLSKGQFTWKLKYNKSGEAYDFDVTTKQLTYHTDRNGI GLTNDWTTSATTYTVKDTSGRFTRVNHTTGSDPKITSIVDSANRTTTYTRNGSGQLTK IDKPGGAVTTMTYDTTGRLATMTVPSAPGTTTITFGYSTAHKVTKITQKSTSPTYGNK ADVVTNFAYNSGNTVVTNPNGKASTYAYDNQGRVTSTKDPLNRTRSQSWTANSDVQTS TDALGSGSTPGNETKNSYDGLNNATKTELPTGAAASAVYSAGAGCASSGGDTFQVKCS TDASGNTASYDYDTAGNPTKKKDTTAGGTGAVEFERVYDNWDSTICGGAPGQVCSAKD GNGNITRYAYDGMYNLAKVTPPAPQGATTYTYDALSRVTSVTDPRGKVTKYAYDVRDR QTLITFANGSTLAKTYYPNGLVQYDSDSFAGTKQFEYDTLGRTTSQIGALAGLNQKYT YDAAGNILTFEDTSGITTNTYNAANELTSQREPGGVCPTSGNPAANSGCTLFEYNGNG VETRRVFPAGAQMVTTLDKAGRTTQVQAKNAAGGVTADVAYSFAKDGVDTLDIQTRTS GKEEGIPAGAVTAYQYDSQSRLTVAEEKAGGNTNAMWAYAYDAAGNRTSQNRSGNTGG TQDTSIDYGYNAANQLTSTSADTTQWVYDAAGNQVKNGMTGVVATYGDRGQVQSIGAT NFAAFGEGNTDTQSATGGRSFSNSILGLSRQTNTSASLVQNYSRTPSGEAVGFRISSS HYYVTDLLGSVIGMFSGAGIWEGGYSYTPYGEERATSSNSAVALNSLRYIGGYQESTN LYKMGARYYDASLGRFTQMDPSGQEPQPYAYAACNPVGNIDPSGLSCAGAVAGFISAA GLLLITAGFALTTPVGAIATAITAGGLLLEGAGVWATWQEVKEECDL" sig_peptide 37602..37718 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /note="Signal peptide predicted for CMS0033 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.877 between residues 39 and 40" misc_feature order(37638..37706,40830..40898,40911..40979) /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /note="3 probable transmembrane helices predicted for CMS0033 by TMHMM2.0 at aa 13-35, 1077-1099 and 1104-1126" misc_feature 38493..38627 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.76" misc_feature 38640..38756 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.096" misc_feature 38802..38909 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.00041" misc_feature 39003..39218 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 4.1" misc_feature 39393..39506 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 2.2e-06" misc_feature 39582..39698 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.0025" misc_feature 39708..39893 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 9.6" misc_feature 40041..40175 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.0052" misc_feature 40197..40325 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.024" misc_feature 40824..40838 /locus_tag="CMS_0033" /old_locus_tag="CMS0033" /note="possible sortase recognition site" gene 41006..41209 /locus_tag="CMS_0034" /old_locus_tag="CMS0034" /db_xref="GeneID:6156035" CDS 41006..41209 /locus_tag="CMS_0034" /old_locus_tag="CMS0034" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708827.1" /db_xref="GI:170780495" /db_xref="GeneID:6156035" /translation="MSNLTPSSNKGRVAQSVVVILVAIAVLLAITGFMGGNLLIGSIF SAVAVLLAVGGYFAVRDIGRREL" sig_peptide 41006..41140 /locus_tag="CMS_0034" /old_locus_tag="CMS0034" /note="Signal peptide predicted for CMS0034 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.727 between residues 45 and 46" misc_feature order(41042..41110,41123..41182) /locus_tag="CMS_0034" /old_locus_tag="CMS0034" /note="2 probable transmembrane helices predicted for CMS0034 by TMHMM2.0 at aa 13-35 and 40-59" gene complement(41571..41702) /locus_tag="CMS_0035" /old_locus_tag="CMS0035" /db_xref="GeneID:6156036" CDS complement(41571..41702) /locus_tag="CMS_0035" /old_locus_tag="CMS0035" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708828.1" /db_xref="GI:170780496" /db_xref="GeneID:6156036" /translation="MGYVQLHRHIRCILANDLLFALFAGVVAVTTEYSTLKSKSLVL" misc_feature complement(41598..41666) /locus_tag="CMS_0035" /old_locus_tag="CMS0035" /note="1 probable transmembrane helix predicted for CMS0035 by TMHMM2.0 at aa 13-35" gene 42106..42321 /locus_tag="CMS_0036" /old_locus_tag="CMS0036" /db_xref="GeneID:6156037" CDS 42106..42321 /locus_tag="CMS_0036" /old_locus_tag="CMS0036" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708829.1" /db_xref="GI:170780497" /db_xref="GeneID:6156037" /translation="MHLSFLHRSRWITYGTAIAIGLAGVAGLVVGNPRGWIPVGIAVL AVLFQRLVSRDARRAQEVGTDPRDTVG" misc_feature order(42136..42195,42208..42261) /locus_tag="CMS_0036" /old_locus_tag="CMS0036" /note="2 probable transmembrane helices predicted for CMS0036 by TMHMM2.0 at aa 107-126 and 131-148" gene 42371..42750 /locus_tag="CMS_0037" /old_locus_tag="CMS0037" /pseudo /db_xref="GeneID:6156038" gene complement(42745..43707) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /db_xref="GeneID:6156039" CDS complement(42745..43707) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /note="N/R/C?" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708830.1" /db_xref="GI:170780498" /db_xref="GeneID:6156039" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(42757..43299) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(43384..43449) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(43449..43570) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(43570..43635) /locus_tag="CMS_0038" /old_locus_tag="CMS0038" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(43805..44287) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /db_xref="GeneID:6156040" CDS complement(43805..44287) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /codon_start=1 /transl_table=11 /product="putative mechanosensitive channel" /protein_id="YP_001708831.1" /db_xref="GI:170780499" /db_xref="GeneID:6156040" /translation="MKGFKDFILRGNVIDLAVAVVIGAAFTAIVTAIVTNVFNPLIGA LFNASTLADAFKVDIPTSTGKPATLLFGAVLAALINFLIVAAVVYFALVVPVNHLKKT AFAKQKAAEEATPKDVPQTETELLIEIRDLLAGRPSAEGAHTIPSSTGQHVAEPGKPA" sig_peptide complement(43805..43900) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /note="Signal peptide predicted for CMS0039 by SignalP 2.0 HMM (Signal peptide probability 0.976) with cleavage site probability 0.308 between residues 32 and 33" misc_feature complement(43880..44287) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /inference="protein motif:HMMPfam:PF01741" /note="HMMPfam hit to PF01741, Large-conductance mechanosensitive channel, score 4.7e-33" misc_feature complement(order(44009..44077,44183..44251)) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /note="2 probable transmembrane helices predicted for CMS0039 by TMHMM2.0 at aa 13-35 and 71-93" misc_feature complement(44219..44260) /gene="mscL" /locus_tag="CMS_0039" /old_locus_tag="CMS0039" /note="PS01327 Large-conductance mechanosensitive channels mscL family signature." gene complement(44284..44643) /locus_tag="CMS_0040" /old_locus_tag="CMS0040" /db_xref="GeneID:6158824" CDS complement(44284..44643) /locus_tag="CMS_0040" /old_locus_tag="CMS0040" /codon_start=1 /transl_table=11 /product="putative integral mebrane protein" /protein_id="YP_001708832.1" /db_xref="GI:170780500" /db_xref="GeneID:6158824" /translation="MRWQAPQAVRRGGRELHGQRLLPQRLAHRGRGEAVAVGVGIGIG FRVVVGEVGRLVVLVVVLRLLVVRFVGLVRVVRFRHRRPGLRYRDPQHPLRSRVLGLR LVLAVHLIGRPARQEHP" gene complement(44742..45317) /locus_tag="CMS_0041" /old_locus_tag="CMS0041" /db_xref="GeneID:6156041" CDS complement(44742..45317) /locus_tag="CMS_0041" /old_locus_tag="CMS0041" /codon_start=1 /transl_table=11 /product="putative 5-formyltetrahydrofolate cyclo-ligase-related protein" /protein_id="YP_001708833.1" /db_xref="GI:170780501" /db_xref="GeneID:6156041" /translation="MPSEVGNEKRALRAQLRERRRQMTATERDEAAHGLTSRLTELVA NHDASRVACYLSTVDEPTTRPFLQWLHANDRQVLLPVSRNDGLLDWVVSDGTETEGLF GLPEPVGELLGPIAINDVDLIVVPAAAVDQGGMRMGWGRGYFDKTLGSMEACPPVYAV VFDAEFVDELPREKHDMPVDGIVTPTLIHSF" misc_feature complement(44763..45293) /locus_tag="CMS_0041" /old_locus_tag="CMS0041" /inference="protein motif:HMMPfam:PF01812" /note="HMMPfam hit to PF01812, 5-formyltetrahydrofolate cyclo-ligase, score 8.1e-45" gene 45358..46254 /gene="galU" /locus_tag="CMS_0042" /old_locus_tag="CMS0042" /db_xref="GeneID:6156042" CDS 45358..46254 /gene="galU" /locus_tag="CMS_0042" /old_locus_tag="CMS0042" /codon_start=1 /transl_table=11 /product="UTP-glucose-1-phosphate uridylyltransferase" /protein_id="YP_001708834.1" /db_xref="GI:170780502" /db_xref="GeneID:6156042" /translation="MVTHITKAVIPAAGLGTRFLPATKAMPKEMLPVVDRPAIQYVVE EAVGAGLHDVLMITGRNKTALENHFDRNAELEATLQLKGDDAKLRKVNESTDLADMHY VRQGDPKGLGHAVLRAEMHVGREPFAVLLGDDIIDKRDVLLSRMIEVQLQRGCSVVAL LEVDPAQTHLYGVATVEATDDDDVVRITGMVEKPAAGTAPSNLAIIGRYVLRPEVFDV LHKTEPGKGGEIQLTDALEKMAAAPEWTGGVYGVVFRGRRYDTGDRLDYLKAIVQLGV DHEDLGEGLREWLPEFVKTLER" misc_feature 45376..46188 /gene="galU" /locus_tag="CMS_0042" /old_locus_tag="CMS0042" /inference="protein motif:HMMPfam:PF00483" /note="HMMPfam hit to PF00483, Nucleotidyl transferase,score 4.8e-14" gene 46312..46980 /locus_tag="CMS_0043" /old_locus_tag="CMS0043" /db_xref="GeneID:6158707" CDS 46312..46980 /locus_tag="CMS_0043" /old_locus_tag="CMS0043" /codon_start=1 /transl_table=11 /product="putative GCN5-related N-acetyltransferase" /protein_id="YP_001708835.1" /db_xref="GI:170780503" /db_xref="GeneID:6158707" /translation="MDVPQTVPTMRDGRISVRPIRLRDSRALERSLLDNRSWLRKWEA TSPYVPMAFDTRASIRSLQANGRAGLGVPLVIDYDDEFAGQLNVSSIAYGSLSSATIG YWVGQEFAGRNVTPTAVALATDYCFTTLGLHRMEICIRPENAPSLRVVQKLGFRYEGL RRRYIHINGDWRDHFCFGLVVEELSTSVLVRWKDGGVDPEWSRVPDADVEAAATPLAV QRRI" misc_feature 46531..46779 /locus_tag="CMS_0043" /old_locus_tag="CMS0043" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 2.9e-07" gene 47079..48047 /locus_tag="CMS_0044" /old_locus_tag="CMS0044" /db_xref="GeneID:6156043" CDS 47079..48047 /locus_tag="CMS_0044" /old_locus_tag="CMS0044" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708836.1" /db_xref="GI:170780504" /db_xref="GeneID:6156043" /translation="MQSGGIIIALSAVLWLAYLLPTWLHRRQYMATERNAVRLQQTLR ILADTAEVPDAVRAETSARSVVEQQRALRRAAEEAEAAARARDAAAQRALPKVAPVSA TSPSAATRLRRTRLAATAVLALALVGVIAGIAQVAGGSAWTLLVISSLATFGSLAILH RMSQIAAARRLQAPEVLQRPRTGFTDFHEQAAQPAEPVAEREEGESWTPVPVPKPLYL SRSQAPGPRPGAGGAPRTPLSPVEEMRRAAAASEETLRRAHLEPEVARLSAEEEEAAP AASVAPAPPAARTAPVSRFSRMGIVDDAEPGMGDLDEVLRRRRAVG" misc_feature order(47091..47150,47424..47492,47502..47555) /locus_tag="CMS_0044" /old_locus_tag="CMS0044" /note="3 probable transmembrane helices predicted for CMS0044 by TMHMM2.0 at aa 5-24, 116-138 and 142-159" gene 48161..48233 /locus_tag="CMS_r008" /old_locus_tag="CMSr008" /db_xref="GeneID:6156044" tRNA 48161..48233 /locus_tag="CMS_r008" /old_locus_tag="CMSr008" /product="tRNA-Ala" /note="codon recognized: GCG; tRNA Ala anticodon CGC, Cove score 78.51" /anticodon=(pos:48194..48196,aa:Ala) /db_xref="GeneID:6156044" gene 48444..49937 /gene="celB" /locus_tag="CMS_0045" /old_locus_tag="CMS0045" /pseudo /db_xref="GeneID:6159027" misc_feature 48948..48977 /gene="celB" /locus_tag="CMS_0045" /old_locus_tag="CMS0045" /note="PS00659 Glycosyl hydrolases family 5 signature." /pseudo misc_feature 49647..49934 /gene="celB" /locus_tag="CMS_0045" /old_locus_tag="CMS0045" /inference="protein motif:HMMPfam:PF00553" /note="HMMPfam hit to PF00553, Cellulose-binding,bacterial type, score 5.5e-06" /pseudo gene 50014..51633 /locus_tag="CMS_0047" /old_locus_tag="CMS0047" /db_xref="GeneID:6158631" CDS 50014..51633 /locus_tag="CMS_0047" /old_locus_tag="CMS0047" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708837.1" /db_xref="GI:170780505" /db_xref="GeneID:6158631" /translation="MPRPAIPSVTIATPEVRALRADLEAAPFTVASALDLWGDAAGKA LHRGNRIPARRAVEAARTADGFPAAAVLASLFVLGDPVDADDLRAALPTLGLDGAARL GLIEVDGDRVRPAVDLRPYGFIDAHGVGEWWIASDLGELATGGALDEDHVLGVGGASA TLSGLMISAPVATALDLGTGCGIQALHASRHADRVVATDISARALAFAALNAALNGIT TIELRLGSLFEPVAGERFDHIVSNPPFVITPRAEGVPAYEYRDAGLVGDALVEGVVAD LADHLTPGGIAQLLGNWEHRAGEPGLERVAGWLDRAAARTGSGLDAWIVEREVQDAAL YAETWIRDGGTRAGTPESEVLMDAWLDDFAAREVDAVGFGYLTLRRPAAGAPTLRRIE RLHGGLGNNPTGLGDHLQASLAAHDALAAVDDRALVGLALVVSVDVTEERHYWPGAED PTVMTLRQGAGFGREVPLDTGLAALVGTCDGELAVGAIVDAVAQLTGVDAVALRAELL PRVHGLVADGFLTLPGTASDDALADHPARDT" misc_feature 50728..50748 /locus_tag="CMS_0047" /old_locus_tag="CMS0047" /note="PS00092 N-6 Adenine-specific DNA methylases signature." gene 51727..52038 /locus_tag="CMS_0048" /old_locus_tag="CMS0048" /db_xref="GeneID:6156045" CDS 51727..52038 /locus_tag="CMS_0048" /old_locus_tag="CMS0048" /codon_start=1 /transl_table=11 /product="transmembrane protein" /protein_id="YP_001708838.1" /db_xref="GI:170780506" /db_xref="GeneID:6156045" /translation="MLIGRASHGEDHAPSGVLGTAWPFLAGRLVGWIVARAWRSPSRV APTGLLVWGVTVVVGMVLRALSGEGVVIPFVITTAIILGLLLLGWRAVSAIVVRRRAR A" misc_feature order(51763..51831,51868..51921,51934..52002) /locus_tag="CMS_0048" /old_locus_tag="CMS0048" /note="3 probable transmembrane helices predicted for CMS0048 by TMHMM2.0 at aa 13-35, 48-65 and 70-92" gene complement(52058..52495) /locus_tag="CMS_0049" /old_locus_tag="CMS0049" /db_xref="GeneID:6156046" CDS complement(52058..52495) /locus_tag="CMS_0049" /old_locus_tag="CMS0049" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708839.1" /db_xref="GI:170780507" /db_xref="GeneID:6156046" /translation="MISTAHATTLLELGLEWSPEPGDRFRIRGQGFESDVFTISELTI EAHEHATGTVLGFNGTTEWALDSVALEDSLWLPREDQLRALLAGAFRSLRREIGGAED GAHVVLVVIDGHEIEHRDLEAEEAYAKALIAVMEAAAPTSPAA" gene 52615..53616 /locus_tag="CMS_0050" /old_locus_tag="CMS0050" /db_xref="GeneID:6156047" CDS 52615..53616 /locus_tag="CMS_0050" /old_locus_tag="CMS0050" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001708840.1" /db_xref="GI:170780508" /db_xref="GeneID:6156047" /translation="MRATVKDVAARAGVSPKTVSNVITGRVAVSPVTRERVERAVTEL DYVPNLSARGLRNGRTGIIAVALPDLSTAYSAELAHHLVEVAHEAGYSIQMEETGSRP DRERDLMSRAREHLVDGLILNPVLLSRSAIARAESLPPVVVIGEVEQEIVDRVLVDSV QAAYDMTRFLLGTGARRIAAVGTATREESAAGDLRRIGYRRAMEEAGEAPVEIDRTGW NSASGAEAVDSWLSDGNPLPDALFCFTDGLAFGVLRALADHGVRVPEDVQVAGFDDVD QSRFSIPTLTTVHFDIRAYAEAAVGQLVRRIEERDGPPVQLVIPHRVVVRGSTRASA" misc_feature 52621..52686 /locus_tag="CMS_0050" /old_locus_tag="CMS0050" /note="Predicted helix-turn-helix motif with score 1636.000, SD 4.76 at aa 3-24, sequence ATVKDVAARAGVSPKTVSNVIT" misc_feature 52627..52683 /locus_tag="CMS_0050" /old_locus_tag="CMS0050" /note="PS00356 Bacterial regulatory proteins, lacI family signature." misc_feature 52792..53595 /locus_tag="CMS_0050" /old_locus_tag="CMS0050" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 6.4e-08" gene 53732..55081 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /db_xref="GeneID:6156048" CDS 53732..55081 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /note="PS00017 ATP/GTP-binding site motif A (P-loop)" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /protein_id="YP_001708841.1" /db_xref="GI:170780509" /db_xref="GeneID:6156048" /translation="MDPVTGKAGGRPSAWSRRQILMGGAAALGGAFLVGGLSGCAPQV ASAGGIVDLKYWHLLSGGDGIRMTEMVKEANDSGGGFDVTATVLAWGQPYYTKLAMAS VGGRAPDVAVMHAARVPGFAPGGLLDPWDTDRLAELGVTQADFEPRVWDKGVVDGKLY SIALDSHPFILMYNTDIAREAGVLGDDGQLAEITSPDGFLEAMRAMQGVTGEHGFSYG YLGDGAQMWRMFYTFYKQMGGDMELPTGGEVVYDRDKAVASLEYIQTLLDGTIATPSG DAGTAIAEFAGGKSGAIVTGVWELPTFQTAKVPLDAMPIPNLFGTPATFADSHAFVLP HQSSPDPVKRETTYAFVADLLKNSLQWAGAGHIPAYKPVIDSPEYAELLPQAHYANAA EQIEYDPVAYFTGSGSDFQTYFAENVQNVFLGRQEAGVGLDAFIRQINALLAKPNPL" sig_peptide 53732..53869 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /note="Signal peptide predicted for CMS0051 by SignalP 2.0 HMM (Signal peptide probability 0.732) with cleavage site probability 0.638 between residues 64 and 65" misc_feature 53801..54814 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 6.3e-13" misc_feature 53819..53851 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 54578..54601 /locus_tag="CMS_0051" /old_locus_tag="CMS0051" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 55177..56121 /locus_tag="CMS_0052" /old_locus_tag="CMS0052" /db_xref="GeneID:6156049" CDS 55177..56121 /locus_tag="CMS_0052" /old_locus_tag="CMS0052" /codon_start=1 /transl_table=11 /product="putative integral membrane binding-protein-dependent transport protein" /protein_id="YP_001708842.1" /db_xref="GI:170780510" /db_xref="GeneID:6156049" /translation="MTTAAPPTPVAPAAGSHAPRPAVGQPRVKAKQQAQGMLFIAPFL ITFLVFLVWPVLYGFYQSLTGQSLTGANSELIGFANYFEAFGDSQMWRSLGNTVVFTI ASTVPLLVVGLVLALLVNLGLPGQWLWRLAFFLPFLLASTVVSLFWLWMYNPQLGVVN AIAGAFGLPQPAWLQDSNLAMTSVVITTVWWTVGFNFLIYLAALQNIPDQQYEAAALD GAGKWRQLFSITIPQLAPTTALLAILQVLASLKVFDQIYQMTAGGPGGSTRPIVQYVF ETGFTGFRFGYSAAISYIFFALIVVISVIQFTATRRKS" misc_feature order(55288..55356,55471..55539,55558..55626,55711..55779, 55852..55920,56023..56091) /locus_tag="CMS_0052" /old_locus_tag="CMS0052" /note="6 probable transmembrane helices predicted for CMS0052 by TMHMM2.0 at aa 2-24, 63-85, 92-114, 143-165,190-212 and 247-269" misc_feature 55444..56118 /locus_tag="CMS_0052" /old_locus_tag="CMS0052" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 8.6e-08" misc_feature 55786..55872 /locus_tag="CMS_0052" /old_locus_tag="CMS0052" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 56118..57038 /locus_tag="CMS_0053" /old_locus_tag="CMS0053" /db_xref="GeneID:6156050" CDS 56118..57038 /locus_tag="CMS_0053" /old_locus_tag="CMS0053" /codon_start=1 /transl_table=11 /product="putative integral membrane binding-protein-dependent transport protein" /protein_id="YP_001708843.1" /db_xref="GI:170780511" /db_xref="GeneID:6156050" /translation="MTTATRPAFSSGTLARKPATSVAARQGRTGTPRFQPSRIAALLI LIVLAAAWLLPFLWAVLTSFKSETDAAAFPVTVFPAGGFTFDAYASVLNGGTIPLWTW NSLLTSTVITVVAVVFSALAGYALSRIDFRGRKLLMGAIVASIIIPPQILIVPLFYQM LSFNLVDTLWAVILPQIVQPAMVFILKAFFDQIPIELEDAARVDGAGRVRVFLQIVMP LSRPILSAVAIFVFIGAWNNFLWPFIATNDATLMTLPVGLQTVKNAYGIQYAQNMASA VLAALPLILVFLFFQRQIIKGISTTGFGGQ" misc_feature order(56232..56300,56430..56498,56523..56591,56619..56687, 56784..56852,56916..56984) /locus_tag="CMS_0053" /old_locus_tag="CMS0053" /note="6 probable transmembrane helices predicted for CMS0053 by TMHMM2.0 at aa 39-61, 105-127, 136-158,168-190, 223-245 and 267-289" misc_feature 56418..57017 /locus_tag="CMS_0053" /old_locus_tag="CMS0053" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 6e-17" gene 57121..58659 /gene="abfA" /locus_tag="CMS_0054" /old_locus_tag="CMS0054" /db_xref="GeneID:6156051" CDS 57121..58659 /gene="abfA" /locus_tag="CMS_0054" /old_locus_tag="CMS0054" /EC_number="3.2.1.55" /note="alpha-N-arabinofuranosidase (arabinosidase)" /codon_start=1 /transl_table=11 /product="alpha-L-arabinofuranosidase" /protein_id="YP_001708844.1" /db_xref="GI:170780512" /db_xref="GeneID:6156051" /translation="MTRARITIDRDFTIGDVPRRLFGSFVEHMGRCVYTGIYEPGHPT ATPEGYRQDVLDLTKELGATVVRYPGGNFVSGYDWEDGVGPVEDRPRRLDGAWHTVET NAFGLHEFVGWSKAAGVEVMEAVNLGTRGVDAARSLVEYANHPGGSKYSDMRRRNGAE DPFDIKLWCLGNEMDGPWQIGHKTADEYGRLAQEAGKAMRLVDPSIELVACGSSNSGM PTFGQWEQTVLGHTYDVVDYVSLHAYYYEHEGDVRSFLASAVDMDFFIESVVATADAT GARLKSRKRIDLSFDEWNVWYQRGLDGEDQPHRIEKAGWREHPRVIEDEYSVTDAVVV GTLLNSLLRHGDRVKIANQAQLVNVIAPIRSEEGGPAWRQSIFWPFARMAQLATGRIL QVEVDSDRYDNDRFGTADVVDVSATWDEEAGTVSLFLANRGLEEDASTEVALRGLDAG RILRAEVLRVPEGGDRHASNTLESGEQVGLVPLEGVDAEGGRLTLTLPALSWAVVVLD VTRS" misc_feature 57991..58623 /gene="abfA" /locus_tag="CMS_0054" /old_locus_tag="CMS0054" /inference="protein motif:HMMPfam:PF06964" /note="HMMPfam hit to PF06964,Alpha-L-arabinofuranosidase, C-terminal, score 3e-53" gene 58824..60116 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /db_xref="GeneID:6158584" CDS 58824..60116 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001708845.1" /db_xref="GI:170780513" /db_xref="GeneID:6158584" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATITGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 58872..58895 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 58950..59015 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature 59637..60095 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature 59934..59984 /locus_tag="CMS_0055" /old_locus_tag="CMS0055" /note="PS01043 Transposases, IS30 family, signature." gene 60153..62114 /locus_tag="CMS_0056" /old_locus_tag="CMS0056" /db_xref="GeneID:6156052" CDS 60153..62114 /locus_tag="CMS_0056" /old_locus_tag="CMS0056" /codon_start=1 /transl_table=11 /product="putative helicase" /protein_id="YP_001708846.1" /db_xref="GI:170780514" /db_xref="GeneID:6156052" /translation="MRGGASSSPRSSSPPAADRPPDTIALMTSTPPAPASTGGGTALA PALERLGTVFGYDAFRGDQQEIVEHVIGGGDALVLMPTGGGKSLCYQIPSLVREGTGV VISPLIALMQDQVDALRAVGVRAAFLNSTQDLETSREVERALLDGDLDLLYLAPERLI LDRMGRLLDEARIALFAIDEAHCVSQWGHDFRKDYLALSMLQERWPEVPRIALTATAN EATHADITARLGLEDARHFVSSFDRPNIRYRIVPKAEPRKQLVDLIRTEHAGDAGIVY CLSRKTVEQTAEALNKQGITALPYHAGLDAAVRQRNQARFLREDGIVMCATIAFGMGI DKPDVRFVAHIDLPKSIEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIDQSEGD AQHRRRLSQHLDAMLALCETVGCRRVQLLRYFSEETGPCGNCDTCLEPVETWDATVPS QKLLSTVVRLQRERNQRFGAAHLIDILLGNETDRVRQQGHDQLATFGIGGELTDVQWR GVVRQLLAQGLLGVSDDGYGTLVITPGSGDVLTGSRQVPMRQEPERIVRGRGTRTTRS KGGQVVDLPEEAQGLFEELRAWRSEQAKEQGVPAYVVFADVTLREVATVRPQDLGQLA GITGVGQKKLDTYGEGLLAVVAAGSVAAD" misc_feature 60327..60827 /locus_tag="CMS_0056" /old_locus_tag="CMS0056" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 2e-28" misc_feature 61017..61247 /locus_tag="CMS_0056" /old_locus_tag="CMS0056" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 3.7e-25" misc_feature 61875..62105 /locus_tag="CMS_0056" /old_locus_tag="CMS0056" /inference="protein motif:HMMPfam:PF00570" /note="HMMPfam hit to PF00570, HRDC, score 1e-23" gene 62529..64538 /locus_tag="CMS_0057" /old_locus_tag="CMS0057" /db_xref="GeneID:6156053" CDS 62529..64538 /locus_tag="CMS_0057" /old_locus_tag="CMS0057" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708847.1" /db_xref="GI:170780515" /db_xref="GeneID:6156053" /translation="MAVTGADADAIRTGARRGAVLPTTGSRSPLGADAVTLGGGLLGA WQERNRSRTIPHAIASMTAAGNLDDLRAVVDGPGERPAPRYPFLDTDVYKTLEGIACE VGRGTASAEMRAFLAEATDVLERVQAEDGYIGSYVQRPGSERAPWSDLAWGHELYNLG HLIQAAIADSRQGGDGRLLAVARRFADAAVRAFGPGGRVEVCGHPEVEMALVELFRET GERAYLDLAAAFVDRRGHGTVATRIFPAEYFQDAHPFREMPAVTGHAVRMAYLAAGAT DVALETGDDELLAASVRLFDDAVRTRLYVTGGLGSRHSDEAIGDAYELPSERSYSETC AAIAVMQWAWRLFLATGEPRFLDTHETVLLNAYAVGLSADGTGFFYDNPLQRRPDHHA QSGAETEGELMRRPWFTCPCCPPNIVRWMSELQDHVAVQDGDDLVIAHPTACVIRTDA LDVRVTTAYPWDGAVRVEVLRASGAESGIVLRRPGWCRSATAVVQGVDGSVAEVDASA PDRWIRASRAWSAGDALVVELDMPVRALGSHPHLDATRGTLAVARGPIVFAVEQEDAG APVDDLLLDPRDLAEARTVPLPLAAPWGPASDAATAADPGVALAVRLRRALPAPDELY PEVVPGTAAPAASADPVDAVLVPYALWGNRSPGAMRVWIRAADTG" gene 64811..66367 /locus_tag="CMS_0058" /old_locus_tag="CMS0058" /db_xref="GeneID:6156054" CDS 64811..66367 /locus_tag="CMS_0058" /old_locus_tag="CMS0058" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /protein_id="YP_001708848.1" /db_xref="GI:170780516" /db_xref="GeneID:6156054" /translation="MQVLASTDFSHLDPEMGYDTGVQDLYRLIYRTLTTATGKDGATI GPDLATDTGTPNADATVWTFTLKDGLKFEDGSPITSESVKFGVERSFDPALAIGTPYT RLYLAGGESYKGPYQSGDLSSIETPDEKTIVFHLNRSVPEFSSVAAQSTLTPFPADKD KVTVTSMDQQPIASGPYRVTARTAGSSLTLERNPEWDQSTDGVRTAKPDKWQFTVGLD QATIDERLLANQGDDKNAIAYTITAASVSRIQTPQIKARTVTGDQACTTYLGLNTTKP HLDDVRVRQAISYAIDKKSLADVAGGPSIAEPASTMLTPSIPGHKDFDLYPSTDSAGD VDKAKALLAEAGVPQGFTMTLDVRNLPSAQKQAEALQQSLAKVGITVEFNIIDTATYY ETIGTPSQQHDAAVTGWCPDWLSPSTVLPTLFDGRQISDKGNNDLSQLNDAAVNAKID EVSAMTDLDAAKTAWGDLDEQIQQLAPTVPLLFAQSVLVVGENVRNAYSSPLFAGGID YATIGLHTGK" misc_feature 64937..66103 /locus_tag="CMS_0058" /old_locus_tag="CMS0058" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 8e-74" gene 66371..67333 /locus_tag="CMS_0059" /old_locus_tag="CMS0059" /db_xref="GeneID:6156055" CDS 66371..67333 /locus_tag="CMS_0059" /old_locus_tag="CMS0059" /codon_start=1 /transl_table=11 /product="oligopeptide transport integral membrane protein" /protein_id="YP_001708849.1" /db_xref="GI:170780517" /db_xref="GeneID:6156055" /translation="MTATLQGASAPDTASAYPTGRPPAVTPAKRVVAALRSTPSVIAS AVFLVLVLVLAVFAPLLSGITGWGPTTFDATAVDPVLGGLPIGPFGGVSAQHWFGVEP QNGRDIFARIAYGARVSMLIAVSATVVTTAVGVIAGMVAGYYGGIVDQIVSRVMDFLM AFPALIFIIAVLSALPAGNRPALLVLVLSVFGWPYTARIVRGQTMTLRTREFVEAARA SGASSLRVVFREVLPNLRGTIIVLATLSVPGYIGTEASLSFLGVGVLPPTPSWGQMIA DSVNWYTVDPAYFIVPGSFLFVTVLSFTVFGDHLRTALEQGEAA" misc_feature order(66485..66553,66611..66670,66731..66799,66842..66895, 66914..66967,67229..67288) /locus_tag="CMS_0059" /old_locus_tag="CMS0059" /note="6 probable transmembrane helices predicted for CMS0059 by TMHMM2.0 at aa 39-61, 81-100, 121-143, 158-175,182-199 and 287-306" misc_feature 66716..67330 /locus_tag="CMS_0059" /old_locus_tag="CMS0059" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 8.1e-42" misc_feature 66983..67069 /locus_tag="CMS_0059" /old_locus_tag="CMS0059" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 67330..68322 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /db_xref="GeneID:6156056" CDS 67330..68322 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /codon_start=1 /transl_table=11 /product="oligopeptide transport system integral membrane protein" /protein_id="YP_001708850.1" /db_xref="GI:170780518" /db_xref="GeneID:6156056" /translation="MIGYLLRRAGAAVIVLALISLFTYAIFFLLQPDPAVTICGKTCT PDKIDSIRALLGLDRPFWVQYGDFVTGLFTGRTYGDGPTAIQCTAPCLGFSFQTQQPV LDLLLSRLPVSITVAVGAAVLWILFGVAGGLVSAIKQGSVWDRTAMAGALVGISVPVP FAALLLQYVLVVQLQVLPFPQSVAFSDDPVGWFESYIMPWTVLALGYAAVYARIVRAN VIDTLQEDYLRTARAKGLSAALVIRRHALRPSLTPVVTLFGMDFAGLLGGAVIAESIF GLNGVGKVAADSIAKNDQPVIMGVTLLAAAFVVVGNVVVDVLYTVLDPRVRITA" sig_peptide 67330..67449 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /note="Signal peptide predicted for CMS0060 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.772 between residues 40 and 41" misc_feature order(67354..67422,67669..67737,67774..67842,67915..67974, 68089..68157,68215..68283) /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /note="6 probable transmembrane helices predicted for CMS0060 by TMHMM2.0 at aa 9-31, 114-136, 149-171, 196-215,254-276 and 296-318" misc_feature 67432..67455 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 67657..68313 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 5.4e-44" misc_feature 67987..68073 /locus_tag="CMS_0060" /old_locus_tag="CMS0060" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 68319..69185 /locus_tag="CMS_0061" /old_locus_tag="CMS0061" /db_xref="GeneID:6156057" CDS 68319..69185 /locus_tag="CMS_0061" /old_locus_tag="CMS0061" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001708851.1" /db_xref="GI:170780519" /db_xref="GeneID:6156057" /translation="MTATETHRPPARAVPGTPLLEVEHLTIAFPTSRGPVEVVKDLSF RVEPDSTLGIVGESGSGKSMTSLAVMGLIPRGGTVTGSIKLAGEELVGRTDRELRAMR GDRMAMVFQDPLSSLNPYYTVGLQIEEAYRAHRPGSRKAVRSTVVAALERVGIKEAAT RVDHYPHQFSGGMRQRIMIAMALCLEPELLIADEPTTALDVTVQAQILDLMRSIRAET GMGMLVITHDLAVVSSLADEVLVMQHGHRVESGTTERVFTAPEDPYTHALLEAIPRID AAYDRLTTGPAS" misc_feature 68463..69053 /locus_tag="CMS_0061" /old_locus_tag="CMS0061" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.5e-52" misc_feature 68484..68507 /locus_tag="CMS_0061" /old_locus_tag="CMS0061" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 68823..68867 /locus_tag="CMS_0061" /old_locus_tag="CMS0061" /note="PS00211 ABC transporters family signature." gene 69182..70117 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /db_xref="GeneID:6156058" CDS 69182..70117 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001708852.1" /db_xref="GI:170780520" /db_xref="GeneID:6156058" /translation="MSPHDASAPAPAPTATAATPEPFLSARDLTKEYVTRGGRGLRPP VRRFLAVDGVSLDVPTGQTLSIVGESGSGKSTTARIIAHLLDPTSGTFALKGEDMTHA KGAALREFRRQVQVVFQDPASSLNPRHTVEQIISAPLRYQGITTPGGHGQLVRDLLDR VGLNPDHAQRYPAQFSGGQCQRIGIARALAVSPGLIVCDEAVSALDVTVQARVIALLR DLQRERGLSYVFIAHDLAVVRQLSDRVAVMSSGKVVEEGTRDDVFERPQHPYTRSLLD AVPRIDPEWDRRRQAARAAAGLDTTAIETAGGSAA" sig_peptide 69182..69232 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /note="Signal peptide predicted for CMS0062 by SignalP 2.0 HMM (Signal peptide probability 0.653) with cleavage site probability 0.553 between residues 17 and 18" misc_feature 69362..69934 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 7.4e-58" misc_feature 69383..69406 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 69704..69748 /locus_tag="CMS_0062" /old_locus_tag="CMS0062" /note="PS00211 ABC transporters family signature." gene 70114..71421 /gene="pip" /locus_tag="CMS_0063" /old_locus_tag="CMS0063" /db_xref="GeneID:6156059" CDS 70114..71421 /gene="pip" /locus_tag="CMS_0063" /old_locus_tag="CMS0063" /EC_number="3.4.11.5" /codon_start=1 /transl_table=11 /product="putative prolyl aminopeptidase" /protein_id="YP_001708853.1" /db_xref="GI:170780521" /db_xref="GeneID:6156059" /translation="MIVGSATVPGVHVTDHEIEVPLDWEAARAGEPTSTITVFARELV APDRRGDDLPALLYLQGGPGGKSPRVLDDGGWIGHALRTHRVVLLDQRGTGRSTPVTA RTMIRFGDDHGSAARYLALFRADSIVQDAEALRQHLEGGRRWSTLGQSYGGFLTLTYL SLAPEALSACYVTGGLASLDPDAEEVYRRTYPRTVRKNAGYHARYPGDVGILSRLADR LQVGDVSLPDGDVLTVRRLQTIGIDLGMAPGRERIHALLDEALDDRGEPTDVLLAEVL RLTSYAGNPLFAAMQESIYASGTRPATAWAAERERGRHPAFAPTARPLLLTGEMMYPW MFDEIRLLRPFRGAVEEMARRDDWPELYDPARLAANEVPIAAAIYHDDMYVDARLQQD TVARVGNARAWITNEHEHDGLGAPGVLGRLMDTIARDGGALPR" misc_feature 70363..71253 /gene="pip" /locus_tag="CMS_0063" /old_locus_tag="CMS0063" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 3.3e-05" gene 71418..72878 /locus_tag="CMS_0064" /old_locus_tag="CMS0064" /db_xref="GeneID:6158868" CDS 71418..72878 /locus_tag="CMS_0064" /old_locus_tag="CMS0064" /EC_number="3.4.11.9" /codon_start=1 /transl_table=11 /product="putative Xaa-Pro aminopeptidase II" /protein_id="YP_001708854.1" /db_xref="GI:170780522" /db_xref="GeneID:6158868" /translation="MTDTTPDTDPGAARVPSTPEDRRPPRLAELPAFQDLMAGGWITP DRTPTTVPGAVEAGAAHRARLSAAMPGVTLAVVSGYAPTRNDDCRYAFRADSDFVWLT GVQIEGAVLVMHAVPGGHDAVLHVPAPAHPGDPRFYSDADHGELWVGPAPAHADWQAA LGIPVRDPDRIARDLAGVRDVRRAGAVTGVPSALADVPRDPALVATLGELRVIKDAWE IEELRRAVDDTVEGFAEVVRAIPRARALGGERWLQGTFDRHARTVGTGPGYATIVGGG GHATTLHWVRCDGPIRDGELVLLDMGVEARSLYTADVTRTIPVSGTFTPEQRLVHDVV ERAHRAGLDAVAPGRPLVDFHHASMEVIAQGLHDMGILPVSVDEALSPAGQHHRRWLV CGIGHHLGLDVHDCSGAGVAGYDRAVEAGMVLTVEPGLYFAPDDGMVPPELRGIGVRI EDDIVVTQTGSDVLSDALPIDARGLESWMHEQRSPS" misc_feature 71577..72002 /locus_tag="CMS_0064" /old_locus_tag="CMS0064" /inference="protein motif:HMMPfam:PF05195" /note="HMMPfam hit to PF05195, Peptidase M24B, X-Pro dipeptidase/aminopeptidase N-terminal, score 7.5e-10" misc_feature 72075..72815 /locus_tag="CMS_0064" /old_locus_tag="CMS0064" /inference="protein motif:HMMPfam:PF00557" /note="HMMPfam hit to PF00557, Peptidase M24, score 2.1e-58" gene 72898..74955 /locus_tag="CMS_0065" /old_locus_tag="CMS0065" /db_xref="GeneID:6156060" CDS 72898..74955 /locus_tag="CMS_0065" /old_locus_tag="CMS0065" /note="contains an N terminal GntR region and a C terminal FAD-dependent oxidoreductase" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001708855.1" /db_xref="GI:170780523" /db_xref="GeneID:6156060" /translation="MSLSALRPAPPRESLREHVHQALSAAIVSGELEPGTLITVPTLA VRFDVSATPVREAVLELEKRGFVETVRNKGFRVTAVSDEELGHLVQVRQLLEAPAMER LAGQLPDGALPGLEALADRIEQGARDGDLRAYLEADQEFHLSLTRMLGNPVLTDAIAD LRSRTRLVGLASMKESSLLDASAAEHHELLRALVAGDGTAAHELMVRHIRHASGWWAR RGRVGRGRGRRPGGSLRRLIRAAVAAISHHGRCVTHYCHRPPPSPPPRGAPTRESRDT MTRHVVVVGGGIVGAACARSLARAGIRVTVVERAAVASGTSAQGEGNILVSDKGPGAE LELAQLAARRWPEVAAELADELGDALPSIEYEPKGGLVVTTTDEGADPLLAFAATQRS AGVQAVPVDRRRALELEPWLNPAITAAVHYPEDAQVQPAIATEALAASARRAGAVVRT GVEVVGPILDADGALRGVRTSAGDIAADDVLIAAGPWSGEVARALGVELPVLPRRGVV LVTTRMPHRIRHKVYDGDYVGAVGSGDGALQTSGVVESTPSGTVLIGSSRERVGFDAS LRVAVLEELAAKAVRLFPFLVEANAMRSYGGFRPYLPDHLPVVGPDPRLPGLWHASGH EGAGIGLSVATADLIAAQMTGETTPLDVRPFSVARASLGLLMPGAAAPGAALPTAAAG VRA" misc_feature 72940..73128 /locus_tag="CMS_0065" /old_locus_tag="CMS0065" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 2.9e-16" misc_feature 73156..73530 /locus_tag="CMS_0065" /old_locus_tag="CMS0065" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 3e-20" misc_feature 73735..74823 /locus_tag="CMS_0065" /old_locus_tag="CMS0065" /inference="protein motif:HMMPfam:PF01266" /note="HMMPfam hit to PF01266, FAD dependent oxidoreductase, score 1.8e-86" gene 75098..76978 /locus_tag="CMS_0066" /old_locus_tag="CMS0066" /db_xref="GeneID:6156061" CDS 75098..76978 /locus_tag="CMS_0066" /old_locus_tag="CMS0066" /codon_start=1 /transl_table=11 /product="putative secreted oxidase" /protein_id="YP_001708856.1" /db_xref="GI:170780524" /db_xref="GeneID:6156061" /translation="MAHDRERGPPARGLLRDRRVLRLHRHRERAAGRAGVPAPCRRGR RGRDRAGREGARRDRARRARGGGVVSGADGRRHVVVIGAGPAGLAAAVAARGRGARVT LLDASDELGGQYWRHLPESRPAARERILHHGWDAFTALRGRLAADDGCEIVTGAQVWA IERPTPDAADAAAADAPAAAAAAPSPAAVVHVLVGQVDGSRREPLTLRPDALVLATGA HDRTLPFPGWDLPGVFTAGAAQALAKGERVAIGDRVIVAGAGPFLLPVAVSLVQAGAR VVGIHEAARVPSLARGWLRSPAGLARAPHKAAELAGYVSVLARQRIGYATGSAVVAAH GTDRVEAVTVQRLDASWAPIPGTERRIAVDAVCVGHGFTPRLELPIAAGCRIGAHRFV EVDASQGAGPAGVFAAGEITGIGGVDQALAEGEVAGHCAAGGSPADAAVASAVRRRAV AHDVAGRIEGAHGIRPGWTGWLRDDTLACRCEEVPVGRLRATARAAESTDLRSMKLAT RAGLGICQGRICGRTVEQLLAAEAPACGSGADAPAPAATGPGTDRRPVASPVRLGELA AAYERRDAGPPSLAAAAPGVDDPPPAAAPPADAPPAGVAPPPAPPTTPAPPRTTDRKD TP" misc_feature 75326..76363 /locus_tag="CMS_0066" /old_locus_tag="CMS0066" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.2e-08" misc_feature 76523..76693 /locus_tag="CMS_0066" /old_locus_tag="CMS0066" /inference="protein motif:HMMPfam:PF04324" /note="HMMPfam hit to PF04324, BFD-like [2Fe-2S]-binding region, score 2.6e-09" gene 76975..77892 /locus_tag="CMS_0067" /old_locus_tag="CMS0067" /db_xref="GeneID:6156062" CDS 76975..77892 /locus_tag="CMS_0067" /old_locus_tag="CMS0067" /codon_start=1 /transl_table=11 /product="putative dihydropicolinate synthase" /protein_id="YP_001708857.1" /db_xref="GI:170780525" /db_xref="GeneID:6156062" /translation="MTAPALDLGGVVVATTLPFREDASAPAGLAVDYDAYAAHCDWLM SNGCRGVGPNGSLGEYSSLTDEERRKVVQVAVETVGDRGIVVAGVHGVGWHQARKWAE IAAEDGADGVLLLPPTIYRASDDEVVEHYARVDEVGLPIMAYNNPFDTKVDLTPQLLQ RLDALENVVAIKEFSGDIRRVTEIQDLTGLDVIAGADDLLLESLIMGAVGWFAGYPNA FPREAVELYGLATSGRIEEAKELYRHLVPVFRWDSRTEFVQAIKLSIDVAGESTGGPT RPPRAPLPAAIAEQVTRDTRRALDHLAGR" misc_feature 76993..77871 /locus_tag="CMS_0067" /old_locus_tag="CMS0067" /inference="protein motif:HMMPfam:PF00701" /note="HMMPfam hit to PF00701, Dihydrodipicolinate synthetase, score 2.4e-26" gene 77900..78901 /locus_tag="CMS_0068" /old_locus_tag="CMS0068" /db_xref="GeneID:6156063" CDS 77900..78901 /locus_tag="CMS_0068" /old_locus_tag="CMS0068" /codon_start=1 /transl_table=11 /product="putative proline racemase" /protein_id="YP_001708858.1" /db_xref="GI:170780526" /db_xref="GeneID:6156063" /translation="MRSSRVFHAVDSHTEGMPTRVVTSGFGVIPGSTMNERRLHLIEH LDHLRLLLMTEPRGHAAMSGAILQPPTRDDCDWGVLYIEVSGCLPMCGHGTIGVATVL VETGLVEVQEPVTTIRLDTPAGLVIARVDVEDGRAASVTIENVPSYVERLDASIEVPG YGTVPYSLAFGGNFYAVVELDALGLPFDRERQQEILAAGLAIMGAINDQDAPSHPEIS GVDHCHHVEFLAPGSDARLSRHAMAIHPGWFDRSPCGTGTSARMAELWARGELAVGDE FVNESFIGSRFTGRILRETAVAGRPAIVPAITGRAWITGMGQYLLDPTDPFPSGFRF" misc_feature 77924..78895 /locus_tag="CMS_0068" /old_locus_tag="CMS0068" /inference="protein motif:HMMPfam:PF05544" /note="HMMPfam hit to PF05544, Proline racemase, score 4.3e-184" gene 78928..80439 /locus_tag="CMS_0069" /old_locus_tag="CMS0069" /db_xref="GeneID:6156064" CDS 78928..80439 /locus_tag="CMS_0069" /old_locus_tag="CMS0069" /codon_start=1 /transl_table=11 /product="putative aldehyde dehydrogenase" /protein_id="YP_001708859.1" /db_xref="GI:170780527" /db_xref="GeneID:6156064" /translation="MTPHETAPTTDQAVDPAVAATVDAVAARAARAAAPLAALAPAAR ARALDTVADALEAIRPELLPVAERETALAPGRLAGELTRTTVQLKILAAAVRDGRYLG ARIDHADPDAAPAPRPDIRRYLVPVGPVLNFAASNFPFAFSVAGGDTASALAVGCPVV VKAHPGHPELSRRVAEAASAALVEAGLPEGTLQLIEGEEAGLAMLRDSRIRAATFTGS LRAGRFLADVAAARPDPIPFFGELGSVNPVVITERAAAERGEDIAAALVASAAGSAGQ LCTAPGIVLIPAGHGLDAVLAEEAGAVAPHGMLNSRIAEGYAGGRAAAIAVDGVRLVA EGRAPAGDDGSVTPTIAAVALADFEAEREVLRHEVFGPFALLVEYPAGTDLAALAART FEGELTASVHLGEGEADAATAELIRVLAARAGRVLVDAWPTGVSVTDAQQHGGPWPAT TLDRGTSVGTASLDRLLRGVAFQGVPDALLPEPLRTANPWGVPQRVSARGARA" misc_feature 78928..80343 /locus_tag="CMS_0069" /old_locus_tag="CMS0069" /inference="protein motif:HMMPfam:PF00171" /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase,score 1.6e-09" misc_feature 79738..79773 /locus_tag="CMS_0069" /old_locus_tag="CMS0069" /note="PS00070 Aldehyde dehydrogenases cysteine active site." gene 80666..82897 /locus_tag="CMS_0070" /old_locus_tag="CMS0070" /db_xref="GeneID:6156065" CDS 80666..82897 /locus_tag="CMS_0070" /old_locus_tag="CMS0070" /codon_start=1 /transl_table=11 /product="putative acyl CoA oxidase" /protein_id="YP_001708860.1" /db_xref="GI:170780528" /db_xref="GeneID:6156065" /translation="MVDTAARGRTTRGTRGRGPAAAPQDGSAAPEGSPHEGALREAGV PVAGAVDAEVARELDRTDGDAGVDTGPRVDVEGLGRVLLGRWADVRRSSRELTSRPEL HRMEGLDMHQHRARVSEQLKILVEHGGVHRAYPVSVGGLEDHGGNIAGFEELVAADPS LQIKAGVQWGLFGSAVMHLGTERHHRELLPGIMTLETPGAFAMTETGHGSDVASIGTT ATYDPETGEFDLHTPFRAAWKDYIGNGAIDGRAATVFAQLVTQGVNHGVHCFFVPLRD ETGAFLPGVGGEDDGLKGGLNGIDNGRLHFDHVRVPRANLLNRYGDVAEDGTYTSEIS SPGRRFFTMLGTLVQGRVSLDGAATSAAKIALQIAVTYGNQRRQFVAGGTDEEVLLDY QRHQRRLIPRIATTYAASFAHEKLLTQFDSVFSGATDTDADRQDLETLAAAFKPLSTW HALDTIQEAREACGGQGFLAENRLVGLRADLDVYATFEGDNTVLLQLVAKRLLTDVNK RFAKADFGVLARYAVEQAADRTLRSTGLRTLGQALADRGSTARSVGQLREPDTQRALL TGRVETMVGEIATALRATRKMPPAEAAALVNRHQDALIEAARAHAQLLQWEAFTEALD PASETGRAMDDGTRRILTWTRDLFGLRLIEEDLAWFLIHGRISSARARAVTAYVDRLV ARLRPHAQDLVDAFGYTPAHVRAAVASGEEKDRQDEARAYRDARIADGSAPRMEKSEK KKG" misc_feature 81674..82174 /locus_tag="CMS_0070" /old_locus_tag="CMS0070" /inference="protein motif:HMMPfam:PF00441" /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase,C-terminal, score 5.1e-07" misc_feature 82481..82879 /locus_tag="CMS_0070" /old_locus_tag="CMS0070" /inference="protein motif:HMMPfam:PF01756" /note="HMMPfam hit to PF01756, Acyl-CoA oxidase, score 0.00022" gene complement(82980..83849) /locus_tag="CMS_0071" /old_locus_tag="CMS0071" /db_xref="GeneID:6156066" CDS complement(82980..83849) /locus_tag="CMS_0071" /old_locus_tag="CMS0071" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="YP_001708861.1" /db_xref="GI:170780529" /db_xref="GeneID:6156066" /translation="MVKELESFDAPDGLGPDDIVDPRTGATRRQIVTAALFMVALFGV EVLQPVAAANAENAWNHPFSTRVRPISGYGYRIHPITGVRTLHRGIDFAPAAGTSIFA IGVGTVERIDYSSGPGTFGHSITIRHPDSDGSNWRSLYAHMSSRSPLSVGQQVDGGTF VGAVGSSGDVTGPHLHIEIRQNNTAIDPASRINDAPLAGGSMAISQADANLISQTIRG AEWYTGNPSNGGETKSVEGIYQGLLQTIIGYGSRTENIEKMVAGLGTRLAQDATFINA VATATAAKVKVKA" misc_feature complement(83286..83597) /locus_tag="CMS_0071" /old_locus_tag="CMS0071" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 2.6e-33" gene complement(84014..84544) /locus_tag="CMS_0072" /old_locus_tag="CMS0072" /db_xref="GeneID:6156067" CDS complement(84014..84544) /locus_tag="CMS_0072" /old_locus_tag="CMS0072" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708862.1" /db_xref="GI:170780530" /db_xref="GeneID:6156067" /translation="MRIHDGGMDVTAREGSDAWRTTSYGFVHDTEHALLAPLDPGAAV EVAFTLDLREQFDQAGVFVRVDAETWIKAGIERSDGEDGLGAVVTRGVSDWSLAPVPG WSGRLVTIRASRMGDALTVRARVDCEPWRLVRVAPLDPDARVTAGPFCCAPTRAGFTA RFASWRTGQADAALHA" misc_feature complement(84020..84538) /locus_tag="CMS_0072" /old_locus_tag="CMS0072" /inference="protein motif:HMMPfam:PF07081" /note="HMMPfam hit to PF07081, Protein of unknown function DUF1349, score 8.6e-36" gene complement(84650..84997) /locus_tag="CMS_0073" /old_locus_tag="CMS0073" /db_xref="GeneID:6156068" CDS complement(84650..84997) /locus_tag="CMS_0073" /old_locus_tag="CMS0073" /codon_start=1 /transl_table=11 /product="putative PemK-like protein" /protein_id="YP_001708863.1" /db_xref="GI:170780531" /db_xref="GeneID:6156068" /translation="MVIRRGDVVWVGFDAPRGSEPAKIRPSLVIQDDWINESGIATIV IIPFTSQVRLQVFPGNVFIPAAASGLDKDSVAVVPQIGPVSRELIEPHPVGHLPGYLM AEVSAAVRLLLAV" misc_feature complement(84656..84988) /locus_tag="CMS_0073" /old_locus_tag="CMS0073" /inference="protein motif:HMMPfam:PF02452" /note="HMMPfam hit to PF02452, PemK-like protein, score 2.3e-17" gene complement(84991..85242) /locus_tag="CMS_0074" /old_locus_tag="CMS0074" /db_xref="GeneID:6156069" CDS complement(84991..85242) /locus_tag="CMS_0074" /old_locus_tag="CMS0074" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001708864.1" /db_xref="GI:170780532" /db_xref="GeneID:6156069" /translation="MKTAISVPDTDFERFDRVAKRFGMTRSEFYRVAAQKLADELEGA DKAELTRLADAAIAEVGQPTAGEDFLRESERIARTGSEW" misc_feature complement(85123..85242) /locus_tag="CMS_0074" /old_locus_tag="CMS0074" /inference="protein motif:HMMPfam:PF01402" /note="HMMPfam hit to PF01402, Helix-turn-helix protein,CopG, score 4.7e-05" misc_feature complement(85141..85206) /locus_tag="CMS_0074" /old_locus_tag="CMS0074" /note="Predicted helix-turn-helix motif with score 1046.000, SD 2.75 at aa 13-34, sequence ERFDRVAKRFGMTRSEFYRVAA" gene complement(85313..86101) /locus_tag="CMS_0075" /old_locus_tag="CMS0075" /db_xref="GeneID:6156070" CDS complement(85313..86101) /locus_tag="CMS_0075" /old_locus_tag="CMS0075" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708865.1" /db_xref="GI:170780533" /db_xref="GeneID:6156070" /translation="MPALPVRRSTTRTAARTTGRAVMPLASIAALAVARPTLRLHLAL YMRDMEAAIFPPHDDVSSIPGPDPERVLFLGDIGVAGYGVLLAGMAMPAQVAARRSTR TGRGVEWETVAAYDMTARKAAALMTGRSGPLDLAIVALGIPDVLVATSPAEWTDRIQA IVGCVREQASDACRIVLMGIPPMDRFQPIPMLGRNLLLAQVTRLNRATSRLDDPAHGI VYAPHPDISGTRLHVRDRFSYRVMHAHWAEAIMPYLGDPRPVAD" misc_feature complement(85343..85375) /locus_tag="CMS_0075" /old_locus_tag="CMS0075" /note="PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature." misc_feature complement(order(85823..85891,85988..86041)) /locus_tag="CMS_0075" /old_locus_tag="CMS0075" /note="2 probable transmembrane helices predicted for CMS0075 by TMHMM2.0 at aa 21-38 and 71-93" gene 86215..87189 /locus_tag="CMS_0076" /old_locus_tag="CMS0076" /db_xref="GeneID:6156071" CDS 86215..87189 /locus_tag="CMS_0076" /old_locus_tag="CMS0076" /EC_number="3.4.11.5" /codon_start=1 /transl_table=11 /product="putative proline iminopeptidase" /protein_id="YP_001708866.1" /db_xref="GI:170780534" /db_xref="GeneID:6156071" /translation="MQSLFPEIDPHDTGLLDVGDGQLLHWEVSGNPDGIPVVFLHGGP GGGTSPTHRRLFDPARYRIVLVDQRGCGRSTPHVSTPEADLSVNTTWHLVADIERLRE HLGVERWLVFGGSWGSTLALAYAETHPARVTGLILRGIFTLRATELDWFYEGPAGMVY PDGWEAFTAPVPGVERGGIIAAYAALLADPDPAVHGPAAVAWSTWEASGITLLPKPDV VARFAEPTYALAFARIENHYFMHGGWMEDGQLIRDAHLLRGIPTEIVQGRYDMCTPAA TAWDLHLALPEARFTMVPDAGHAFDEPGILDALIEATERAADRLAPTS" misc_feature 86395..87168 /locus_tag="CMS_0076" /old_locus_tag="CMS0076" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1e-27" gene complement(87259..87756) /gene="gct" /locus_tag="CMS_0077" /old_locus_tag="CMS0077" /db_xref="GeneID:6156072" CDS complement(87259..87756) /gene="gct" /locus_tag="CMS_0077" /old_locus_tag="CMS0077" /codon_start=1 /transl_table=11 /product="putative glycerol-3-phosphate cytidyltransferase" /protein_id="YP_001708867.1" /db_xref="GI:170780535" /db_xref="GeneID:6156072" /translation="MTRIGYAAGAFDLFHVGHLNILKHAKSRCDFLIAGVVSDEMLER NKGITPVVPLAERLEIVSHISYVDQARAETLPDKLDTWREVGFDVFFKGDDWRGTPKG ERLEAEFAAVGVEVVYFPYTMHTSSTRLRRALDILSGVGAPAAAPAATLAQPASHALS TLVSR" misc_feature complement(87358..87741) /gene="gct" /locus_tag="CMS_0077" /old_locus_tag="CMS0077" /inference="protein motif:HMMPfam:PF01467" /note="HMMPfam hit to PF01467, Cytidylyltransferase, score 3.2e-13" gene 88135..90780 /locus_tag="CMS_0078" /old_locus_tag="CMS0078" /db_xref="GeneID:6158712" CDS 88135..90780 /locus_tag="CMS_0078" /old_locus_tag="CMS0078" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001708868.1" /db_xref="GI:170780536" /db_xref="GeneID:6158712" /translation="MRHRTPPTGSTRTPDGSTPARTGTDRHAAAATRPRPARHLVALA VVVGLAVPAVLVAPQAASAATGQDLTAGTPVFTDSFTRSATGGWGTAAGTGAYSYDGV SAFRANGTQGVIDLARAGTAASAAVPVAAPVDSETTVRVLIPRVPAQGNGVYAGLQQR VTGSSYYQSSVRVDSAGDARLSVVRVNGSTAGQATVVGDTVVARGVVPGRVVVIQSRV SGSAAVAIDARAWVDGQAVPGWQAAAVDTSASRLVAGTGTRLWSYLSKSSGPQSVAFD DVAVRPLTAPVAAPAPTPTPAPTTPAPAPAPGTGSGSSDAEQGVSLGDARTGAGSAPV GSTSYGVPSDAVYVAPTGSNGGSGSKSSPYATIQKAVDAAPAGRTIVVRAGTYHESVV MPQGKALTLQSYPGERVWLDGSRQVSSWTASGSTRYASGWDVAFDASPTYTRGKPDGT ATGWRFVDPAYPMAAHPDQVWIGQTAQKQVASRDRVVAGTFFVDTAADRLYIGSDPGS QPVRSSDLVQALSVRGDGSTVRGIGIRRYAPSVPDLGAVVVQARNVTVENLVITDNAT TGISITATGAKATALTVARNGMLGMHANYADGLRASRLLVADNDTERFNRAPVSGGFK ITRSRDVDVKDSAILRNVGNGLWFDESVYDAVVSGNDVMDNSGSGVAFELSATIAIVD NVVARNGEEGVWIDDTGHVDIWNNTFVANDRNIDISQGTRRASDLSTAGHDPRQKLPD PTVTWVVTDVDIANNVMQGSTGNALLAVEDHSHQRSAGQMGITTSGNVYQRDAANRPG WAVIWSRGAGDPAVYGSVQAFSAATGNDRSSLAIDGRPVVGSGFRLTDEVRRVETQVA VPLLGTVAGLIGWLTGARELGADVG" sig_peptide 88267..88323 /locus_tag="CMS_0078" /old_locus_tag="CMS0078" /note="Signal peptide predicted for CMS0078 by SignalP 2.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.968 between residues 19 and 20" gene 91133..93754 /locus_tag="CMS_0079" /old_locus_tag="CMS0079" /db_xref="GeneID:6156073" CDS 91133..93754 /locus_tag="CMS_0079" /old_locus_tag="CMS0079" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001708869.1" /db_xref="GI:170780537" /db_xref="GeneID:6156073" /translation="MNGTPRSSRSHRSRHAIALAVAAGLVLPAALVAADPASAATGQD LVAGAAVHSDAFTRSATGGWGTAPGSAAYAYDVPAAFRVNGTQGVVDLPKAGTSLTAT LPGTVPADAEATMRVMLPRIPAVGSGVYAGLQQRAAGSSYYQTSVRVDPAGDARLSVV RVNGSTAAQTTLAAEVVVARGLVPGQVLSVQSRVSGSSPVAVDARAWRVGTAVPAWQA AATDASAARLTAGSATRVWSYLSSSSRPQALAFDDLAVRPLTRAGSTPAPTPTATPTA TPTPTAIPTPTATPTPTPTPTAPAPTPSDPEQTVPRGDARPGTGSGAAAVGTTTYPAP ADGVYVSPTGSDTGAGTKASPYASIRRAVEAAPSGRTIVVRAGTYRETVVMPAGKALT LQSYPGEAVWLDGSRALTSWTASGSTRYASGWDVTFDASPTYTRGAPDGTKEGWAFVD PARPLAAHPDQVWIGQAAQRQVASLGQVVPGTFFVDTAADRLYIGSDPSGQTVRASDR VSALAVRGDGSTVRGIGIRRYAPSVPDMGALVVSGRDVTIADVAITDNATTGLSIQAT DVTLRAVTSARNGMLGIHANYADRLRASQLLVADDNTEGFNRAPVSGGVKITRSRDVD VVDSAFLRSAGNGLWFDESVFDATVAGNDVLANTGNGIVFELSAQLSFVDNVAAGNGA AGLWIDDSGHAQVWANTFSANRRDVDIAQGTRRAANLGEAGHDPRQPLPDPTVTWIVT DIQVADNVMQGSTGNALLAVEDHSHERSATQMGITTAGNAYQRDIASSPRWAIVWARG PGDPAVHDTVAAFAQATGNDRTSLDVVGRKVLGSGWRLTAEVAAQQATVAVAVPADVA ALRGVATGARVIGASAG" sig_peptide 91133..91249 /locus_tag="CMS_0079" /old_locus_tag="CMS0079" /note="Signal peptide predicted for CMS0079 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 between residues 39 and 40" gene 94101..95654 /locus_tag="CMS_0080" /old_locus_tag="CMS0080" /db_xref="GeneID:6156074" CDS 94101..95654 /locus_tag="CMS_0080" /old_locus_tag="CMS0080" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001708870.1" /db_xref="GI:170780538" /db_xref="GeneID:6156074" /translation="MSTTRNRPATRGERTRLRTERRSAHRPIIGSGVAPVAPVAPAVP SGRRWARDYRTRLMASDWAIIVATVLVAQLTRFGTGDAAVEAGSMQLDYGVVSVVVVA AWIAVLGAFRTRDARIVGVGVSEYKRVVNASAITFGALAIGFLLLKVDIARGYVVLAF PLGVVALLVSRWTWRQWLIRRRLQGAHLSRVVVVGSRADVEDVAAQILLRPASGYAVV GVAIDDHIAGLEVAGRTIPVVSDLGSVAAAAARTAADAVIVASQPRAGSNAVRTLGWE LEGSSIELVLASRLTDVAGPRIHFRPVEGLPLIHVEIPQFEGGKHVMKRALDIAVAGL ALVVLSPVMLVIACVVRIDSPGGAIFRQERVGKSGQEFHMLKFRSMRVTAEAELEALA EANEGSGPLFKMRSDPRVTRVGTVLRRYSLDELPQLWNILVGDMSLVGPRPPLRREVQ GYESHVHRRLFIKPGLTGMWQVNGRSDLSWDESVRLDLYYVENWSLTGDVMIMWRTFR VLTRPVGAY" sig_peptide 94101..94226 /locus_tag="CMS_0080" /old_locus_tag="CMS0080" /note="Signal peptide predicted for CMS0080 by SignalP 2.0 HMM (Signal peptide probability 0.900) with cleavage site probability 0.487 between residues 42 and 43" misc_feature order(94269..94337,94365..94433,94488..94541,94551..94619, 95088..95156) /locus_tag="CMS_0080" /old_locus_tag="CMS0080" /note="5 probable transmembrane helices predicted for CMS0080 by TMHMM2.0 at aa 57-79, 89-111, 130-147, 151-173 and 330-352" misc_feature 95070..95651 /locus_tag="CMS_0080" /old_locus_tag="CMS0080" /inference="protein motif:HMMPfam:PF02397" /note="HMMPfam hit to PF02397, Bacterial sugar transferase, score 1.7e-78" gene 95654..96898 /locus_tag="CMS_0081" /old_locus_tag="CMS0081" /db_xref="GeneID:6156075" CDS 95654..96898 /locus_tag="CMS_0081" /old_locus_tag="CMS0081" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001708871.1" /db_xref="GI:170780539" /db_xref="GeneID:6156075" /translation="MSAIEPRRLRIAMVGTRGVPAAYGGFETAIEEIGQRLAARGHDV TVYCRSAGRSTNRARPRTHLGMTLVHLPALKTKSIETLSHTALSAIHLALGKRQDAAF VFNAANAPFVPLIRSRGTATAVHVDGLEWKRGKWGRMGKKYYRIAEQMAVKDADALIS DAQGIADYYDHEFGIPTELLTYGADILRDPASDRLAELGLEPGQYHLVVARFEPENHV DVIVDGYTASDATLPLVVVGSAPYSAAYTDRIERVATADPRIQRLGGVWDQEQLDQLY AHALTYIHGHSVGGTNPSLLRAMGAATATLANDNVFNRDVLGEDGRFWSDAAGVAALV EGAEAAADEAVAIGRRLQERAEETYDWDAIADGYEELAARMTRGYSTHGMSRGVRSAT RWEPELRASDASRTSFLLEESR" gene 96895..97707 /locus_tag="CMS_0082" /old_locus_tag="CMS0082" /db_xref="GeneID:6156076" CDS 96895..97707 /locus_tag="CMS_0082" /old_locus_tag="CMS0082" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001708872.1" /db_xref="GI:170780540" /db_xref="GeneID:6156076" /translation="MTAAADPRAESYLDVVRRLASAQKKAARGAPAYSIRVNRPAGRL LAAWAFRAGLTPNQVTAISAAFTFTGIALIALVQPAAWLGIAVWLLLAVGYAFDSADG QVARLRGGGSLSGEWLDHVVDCIKISSLHLAVLVSMYRWPATDSDAWLLVPIAYAIVA AASFFAMILNDQLKRVHAVTGATAPEAGRSTLLRSLLVIPTDYGFLCIVFVLLGAPVV FLAVYALMMVANAGHLALASVKWFRDMGALDARRAEAATSSASAAGSARVPA" misc_feature order(97102..97170,97336..97404,97465..97533,97543..97611) /locus_tag="CMS_0082" /old_locus_tag="CMS0082" /note="4 probable transmembrane helices predicted for CMS0082 by TMHMM2.0 at aa 70-92, 148-170, 191-213 and 217-239" misc_feature 97156..97629 /locus_tag="CMS_0082" /old_locus_tag="CMS0082" /inference="protein motif:HMMPfam:PF01066" /note="HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 0.0028" misc_feature 97195..97263 /locus_tag="CMS_0082" /old_locus_tag="CMS0082" /note="PS00379 CDP-alcohol phosphatidyltransferases signature." gene 97704..98945 /locus_tag="CMS_0083" /old_locus_tag="CMS0083" /db_xref="GeneID:6156077" CDS 97704..98945 /locus_tag="CMS_0083" /old_locus_tag="CMS0083" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001708873.1" /db_xref="GI:170780541" /db_xref="GeneID:6156077" /translation="MTAFAGVEHALARADADGADLRGRTILVAHPSAELYGSDRVLLE SVAGLVAAGARTVVTLPSGGPLVDALTGVGAVVHHAPTPVLRKSMLRPRGFAALVGQS VRGLSAGLGLVRRTRPDAVYVNTVTIPLWILIGRLAGRPVLAHVHEAEGSASRAVGTA LALPLALATSVVANSRYSVDVLGRALPRVARRAEVVYNGVPGPAGVQPAREALDGGLR VLYVGRLSDRKGVDVAVDAIVELRDRGVPATLDIVGAVFPGYEAYEEQLRTTIRVLDL EDRVTLHGFHADVTPFVAAADACVVPSRVDEPFGNTAVEALLAARPVVVSDTSGLREA AGGYESAQLVPPSDPAALADALQSIAADWDAYRARAARDRFRAEHRHGPELYRQRIAR SVGTMLTLTKRVGSPRPASDR" misc_feature 98313..98834 /locus_tag="CMS_0083" /old_locus_tag="CMS0083" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 2.6e-30" gene 98995..104625 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /pseudo /db_xref="GeneID:6156078" misc_feature 102070..102285 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /inference="protein motif:HMMPfam:PF00801" /note="HMMPfam hit to PF00801, PKD, score 1.4e-18" /pseudo misc_feature 102322..102543 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /inference="protein motif:HMMPfam:PF00801" /note="HMMPfam hit to PF00801, PKD, score 6.9e-17" /pseudo misc_feature 102577..102801 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /inference="protein motif:HMMPfam:PF00801" /note="HMMPfam hit to PF00801, PKD, score 6.7e-20" /pseudo misc_feature 102826..103059 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /inference="protein motif:HMMPfam:PF00801" /note="HMMPfam hit to PF00801, PKD, score 1.9e-19" /pseudo misc_feature 103117..103158 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /note="PS00213 Lipocalin signature." /pseudo misc_feature 103732..103968 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /inference="protein motif:HMMPfam:PF00801" /note="HMMPfam hit to PF00801, PKD, score 5.1e-20" /pseudo misc_feature 103843..103866 /locus_tag="CMS_0084" /old_locus_tag="CMS0084" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." /pseudo gene 104728..105690 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /db_xref="GeneID:6156079" CDS 104728..105690 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /note="N/R/C Appears to be associated with the deletion of the central portion of an EPS cluster and the insertion of a sugar hydrolase with the same Pfam match as Cmm tomatinase" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708874.1" /db_xref="GI:170780542" /db_xref="GeneID:6156079" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 104800..104865 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 104865..104986 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 104986..105051 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 105136..105678 /locus_tag="CMS_0086" /old_locus_tag="CMS0086" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(105701..107005) /locus_tag="CMS_0087" /old_locus_tag="CMS0087" /db_xref="GeneID:6156080" CDS complement(105701..107005) /locus_tag="CMS_0087" /old_locus_tag="CMS0087" /codon_start=1 /transl_table=11 /product="putative sugar hydrolase" /protein_id="YP_001708875.1" /db_xref="GI:170780543" /db_xref="GeneID:6156080" /translation="MSRTPSDPSTAGRRPTAIPDARRAEALITVRDADGQPLAHADVV VEQASQDIAFGNIGFDLIPLANGETDPAEAGIEAFGGARLEGLERLAEQWLDVFDTAT LPFYWGRFEPVRGKPDTERLLTTARWLRERGVDVKGHPLVWHTVTAQWLLDLPLDEVE RVQRERIRRDVGDFAGLIDMWDAINEAVIMPVFDREDNGITRLAAARGRLAMVRMAFE EAHAADPAATLVLNDFDLSPAYEELIEEVLGAGIPVDAIGLQTHMHQGYRGEEEVLGI VDRFARFGLPIHMTETTLLSGDPMPPEITDLNDFRVTSWPSTPAGEERQADEIERHYR SLVGHPAVAAITYWGLTDDGMWLGAPGGLVRADGTPKPSYEALRRLIREEWRLAPTTL RTDAEGRVRVTAFAGGVRVAHAGREAVVAVPAGASEAEAALG" misc_feature complement(105863..106741) /locus_tag="CMS_0087" /old_locus_tag="CMS0087" /inference="protein motif:HMMPfam:PF00331" /note="HMMPfam hit to PF00331, Glycoside hydrolase, family 10, score 5.1e-12" gene 107245..108303 /locus_tag="CMS_0088" /old_locus_tag="CMS0088" /db_xref="GeneID:6156081" CDS 107245..108303 /locus_tag="CMS_0088" /old_locus_tag="CMS0088" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001708876.1" /db_xref="GI:170780544" /db_xref="GeneID:6156081" /translation="MTRTPVTHDAARLSVLYLGGTGTISAACVRASVAAGMDVTVVNR GADAQGRGTPDGVTTRIADVTDPAALLAAIGDRTFDAVVDFLSFDAAGADRRVEVFAG RTRQFVAISSASIYRKPALQTPITESTLRANPFLSYARDKIAMEDAFLRYHAASGFPV VIVRPSHTYDEASPPLAGDWTVVDRIARGDEVVVPGDGTSLWTLTHADDFAVGLVGIL GDERAVGEALHITSGDVMTWDRIRRLVADALGVEARLVHVPAEQFPVVEPDWGWSELV LGDLSHSAVFDTTRIRRLVPAFQPRIPFHLAVRGIVAWRAAHPELTRPDADTDRRIQR LVDAKHAADAAYRAAAAG" sig_peptide 107245..107352 /locus_tag="CMS_0088" /old_locus_tag="CMS0088" /note="Signal peptide predicted for CMS0088 by SignalP 2.0 HMM (Signal peptide probability 0.632) with cleavage site probability 0.442 between residues 36 and 37" misc_feature 107281..107349 /locus_tag="CMS_0088" /old_locus_tag="CMS0088" /note="1 probable transmembrane helix predicted for CMS0088 by TMHMM2.0 at aa 13-35" misc_feature 107296..107328 /locus_tag="CMS_0088" /old_locus_tag="CMS0088" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(108350..109159) /locus_tag="CMS_0089" /old_locus_tag="CMS0089" /db_xref="GeneID:6156082" CDS complement(108350..109159) /locus_tag="CMS_0089" /old_locus_tag="CMS0089" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708877.1" /db_xref="GI:170780545" /db_xref="GeneID:6156082" /translation="MKDIVRQIVVISSMAFAVIGSAFGSGAFSDRSIQNASSGALSAS YTPVAPAGPAFSIWSVIYLGLVAYTIWQALPAQRADERQRRVGYPVAVTLVLNAAWIL TAQAGFLVLSGVVIVALLLTLIWTFRTLMATRPRNLVEGVVLDGTMGLYLGWVSVATI ANITSILTASGFQPGTTGRDAWAVVLLAVAGVVGVLLALRDGGRLAPSAAIAWGLAWV AVGRLTGELLSTPAAVAALVAAAAVVVVTLVARARTGWVGRVAARPAVAAR" sig_peptide complement(108350..108436) /locus_tag="CMS_0089" /old_locus_tag="CMS0089" /note="Signal peptide predicted for CMS0089 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.349 between residues 29 and 30" misc_feature complement(order(108413..108481,108491..108544, 108563..108616,108644..108712,108770..108838, 108851..108904,108962..109030,109073..109141)) /locus_tag="CMS_0089" /old_locus_tag="CMS0089" /note="8 probable transmembrane helices predicted for CMS0089 by TMHMM2.0 at aa 7-29, 44-66, 86-103, 108-130,150-172, 182-199, 206-223 and 227-249" gene 109249..109776 /locus_tag="CMS_0090" /old_locus_tag="CMS0090" /db_xref="GeneID:6156083" CDS 109249..109776 /locus_tag="CMS_0090" /old_locus_tag="CMS0090" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001708878.1" /db_xref="GI:170780546" /db_xref="GeneID:6156083" /translation="MAAGMSAQDELASWPTGRLLSTAARAVEHAWGEALATLGVTHAG LIALHLLRDGPLSQIQLARSAHVETQTMSRTLERLEREGLVSRAPDPADRRRHVVART DAGADAWERAQALEQDVVPELARSEEMRRGLIDVIRAAGRPAPAASPASPAGTAASPA SPASPAGTAAEGRAR" misc_feature 109366..109668 /locus_tag="CMS_0090" /old_locus_tag="CMS0090" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 5.8e-07" misc_feature 109414..109479 /locus_tag="CMS_0090" /old_locus_tag="CMS0090" /note="Predicted helix-turn-helix motif with score 1418.000, SD 4.02 at aa 56-77, sequence LSQIQLARSAHVETQTMSRTLE" gene 109773..110513 /locus_tag="CMS_0091" /old_locus_tag="CMS0091" /db_xref="GeneID:6156084" CDS 109773..110513 /locus_tag="CMS_0091" /old_locus_tag="CMS0091" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708879.1" /db_xref="GI:170780547" /db_xref="GeneID:6156084" /translation="MTRPADPISAAAPDLPGRAVIRQVWSDLAFVHWRVDPALVAPLL PPGTRPDVHDGSSWVGLIPFVLSRSAFPPLPAVPWAGTFAELNVRLYSVGDDGRRGVV FRSLEAAKLLPTIGARVGLGLPYMWASMTHEEHDGVVTYTSRRHTGSRPTSRISVRPL GEEAEGDPLADFLTARWGMHVARGGVTRYWPNTHDAWTLERAELVDLDDELVAAAGLP GVVDRAPDSVLFSRGVRTEFAGPLRPRA" gene complement(110574..112409) /locus_tag="CMS_0092" /old_locus_tag="CMS0092" /db_xref="GeneID:6156085" CDS complement(110574..112409) /locus_tag="CMS_0092" /old_locus_tag="CMS0092" /codon_start=1 /transl_table=11 /product="putative glycosyl hydrolase" /protein_id="YP_001708880.1" /db_xref="GI:170780548" /db_xref="GeneID:6156085" /translation="METPASRPAPERTDGYVALRSYAAIGDGRTVALIAEDGDIDWLP LPNLHTPPAFAAILDAPHGGRITLRPDEEFEVTRAYVPGTNVLTTTFTTASGSVRVTD ALVTGVAGRLPWSELGRRIEGLTGEVAMSWLVAPGTALGTSSPWVQSTHNGPVIRVDG VTLAVVGLDHGSAEPGTQSVSGAFTTKEGSRHVITMVGTEREPVRIPNPEIVDESIDR TIRNWEGWSAEFRYEGEWAEAVQRSALALKLLVHAPTGSIAAAATTSLPERMGGGKNW DYRFAWVRDLAYTVNALVRFGLREETHAAVSWMLRTIRDNGPDLHVFYSLEGGVPEGS SNPEVPGWRGVGPVVDGNDAQAQLQLGVFGDLFDVVRTYVRDGNVLDADTGRLLATFA DRTCDSWQKRDAGMWELEDEQHYTTSKLGCWQALDCAVELAELGQIPGVPDRWRAERD RIRAWVEEECWDEGRGAYVMHPGSQRLDASILLHAVSGFDRGEHMSSTLDALRPELGR GPLLYRYSGMPEEEGTFTACAFWLAGAYACVGRMDEARELTDQLVDLGNDVGLYSEMI DADDHAFLGNLPQGLSHLALVSAALTIDELSGGRKRSTRTPRAKR" misc_feature complement(110637..111713) /locus_tag="CMS_0092" /old_locus_tag="CMS0092" /inference="protein motif:HMMPfam:PF00723" /note="HMMPfam hit to PF00723, Glycoside hydrolase, family 15, score 3.6e-49" gene 112656..113189 /locus_tag="CMS_0093" /old_locus_tag="CMS0093" /db_xref="GeneID:6156086" CDS 112656..113189 /locus_tag="CMS_0093" /old_locus_tag="CMS0093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708881.1" /db_xref="GI:170780549" /db_xref="GeneID:6156086" /translation="MTLIEAVRGDITRQDVDAIVNAANSSLLGGGGVDGAIHRAAGPE LLAACRRVRADELPDGLPAGDAIATPGFRLPARHVIHTVGPVWSRSDDRTAVLASAYR RSIEVASALGIRSVAFPAVSAGVYGWPLDDAARVAVGAVRGAVADGAAEGIELVRFVL FSDEVLAAFEGALASDV" misc_feature 112713..113069 /locus_tag="CMS_0093" /old_locus_tag="CMS0093" /inference="protein motif:HMMPfam:PF01661" /note="HMMPfam hit to PF01661, Appr-1-p processing, score 2.1e-47" gene complement(113260..113332) /locus_tag="CMS_r041" /old_locus_tag="CMSr041" /db_xref="GeneID:6156087" tRNA complement(113260..113332) /locus_tag="CMS_r041" /old_locus_tag="CMSr041" /product="tRNA-Phe" /note="codon recognized: UUC; tRNA Phe anticodon GAA, Cove score 75.81" /anticodon=(pos:113297..113299,aa:Phe) /db_xref="GeneID:6156087" gene complement(113405..113478) /locus_tag="CMS_r015" /old_locus_tag="CMSr015" /db_xref="GeneID:6159055" tRNA complement(113405..113478) /locus_tag="CMS_r015" /old_locus_tag="CMSr015" /product="tRNA-Asp" /note="codon recognized: GAC; tRNA Asp anticodon GTC, Cove score 81.75" /anticodon=(pos:113442..113444,aa:Asp) /db_xref="GeneID:6159055" gene complement(113520..113592) /locus_tag="CMS_r016" /old_locus_tag="CMSr016" /db_xref="GeneID:6159034" tRNA complement(113520..113592) /locus_tag="CMS_r016" /old_locus_tag="CMSr016" /product="tRNA-Glu" /note="codon recognized: GAA; tRNA Glu anticodon TTC, Cove score 61.85" /anticodon=(pos:113556..113558,aa:Glu) /db_xref="GeneID:6159034" gene 114004..115314 /locus_tag="CMS_0094" /old_locus_tag="CMS0094" /db_xref="GeneID:6159039" CDS 114004..115314 /locus_tag="CMS_0094" /old_locus_tag="CMS0094" /codon_start=1 /transl_table=11 /product="putative secreted peptidase" /protein_id="YP_001708882.1" /db_xref="GI:170780550" /db_xref="GeneID:6159039" /translation="MIGITMHHDLLRSSPTSGARRQRPRGRRSLQAIVAIAAVLLTGS IAAPAHADTFASWDDVQKARGDEQAQQALVQRINDEIASLQQKVSDAQDLVVQRGDEH DKAQQAADDKQAETILLQQRVDEAAEKATKSQEQAAGLAKQLMRSGGQNLSGTLLLSE GDGSDDLLDKLGTMSKVAEKSDQIYAIALQDRNAAKSLSDQAQVALTELDALNAKAEQ LLEEAAQAQQDLEQALEDQSAQKADADAKLSVITENREATEDDYQAGVRKRQADADAL AASQGGAGGDVSPGAISSSGWTAPLPGASTSSFFGYRIHPIYHTKIMHAGEDLVRGYS CGETQYAAHSGTVSFAGRNGGYGNYIRIDHGGGVSSAYGHIMDGGTLVRTGQQVVAGQ PIARTGTTGGSTGCHLHFEIRIDGNAVDPVAFMHGQGVSITSTH" sig_peptide 114004..114156 /locus_tag="CMS_0094" /old_locus_tag="CMS0094" /note="Signal peptide predicted for CMS0094 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.929 between residues 51 and 52" misc_feature 114088..114156 /locus_tag="CMS_0094" /old_locus_tag="CMS0094" /note="1 probable transmembrane helix predicted for CMS0094 by TMHMM2.0 at aa 29-51" misc_feature 114967..115266 /locus_tag="CMS_0094" /old_locus_tag="CMS0094" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 5e-34" gene 115316..116722 /locus_tag="CMS_0095" /old_locus_tag="CMS0095" /db_xref="GeneID:6156088" CDS 115316..116722 /locus_tag="CMS_0095" /old_locus_tag="CMS0095" /codon_start=1 /transl_table=11 /product="putative secreted peptidase" /protein_id="YP_001708883.1" /db_xref="GI:170780551" /db_xref="GeneID:6156088" /translation="MRNDMNHLRPTTVVISTIAVGVIAVSSGVAAQTAFAATDYPSWA DVQAAKANQADTQAAIDRVTELVTGLQESADQSNKAALIAGEKYAEAQALRDAKADEL ARLQKKADEAQATALTSRMRAGLLASHLARAGGQDITASLFSSDGEDAEELLRSLGTM SKLSESTQSVYQQALADRNSAASLSDQAQVAKDDLARLADEAQQALDDANSAAATAQA AVTEQTRNSDQLIAQLALLKDSTAEIEAQYIQSITQPPIPAAAAAPAASSGSSSGGSS GGSSSGGGSSSGGGGGGASSGGGGGSSSGGGSSAPAPAPAPQQPAPQQPSRPAPAPAP APAPAPAPSGNAAQVAIGFAKAQLGESYVLGGAGPNVWDCSGLVMMAYRAAGIDVGSH SVSSQYAKMQSQGRLVPFSQRQAGDIIFWNSGGGFYHDAISLGGDTIIAAPKPGDVVK IQGLWGGSDIMPYVGRPG" sig_peptide 115316..115423 /locus_tag="CMS_0095" /old_locus_tag="CMS0095" /note="Signal peptide predicted for CMS0095 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.991 between residues 36 and 37" misc_feature 115352..115420 /locus_tag="CMS_0095" /old_locus_tag="CMS0095" /note="1 probable transmembrane helix predicted for CMS0095 by TMHMM2.0 at aa 13-35" misc_feature 116390..116719 /locus_tag="CMS_0095" /old_locus_tag="CMS0095" /inference="protein motif:HMMPfam:PF00877" /note="HMMPfam hit to PF00877, NLP/P60, score 6.7e-11" gene complement(116846..117373) /locus_tag="CMS_0096" /old_locus_tag="CMS0096" /db_xref="GeneID:6156089" CDS complement(116846..117373) /locus_tag="CMS_0096" /old_locus_tag="CMS0096" /codon_start=1 /transl_table=11 /product="putative inorganic pyrophosphatase" /protein_id="YP_001708884.1" /db_xref="GI:170780552" /db_xref="GeneID:6156089" /translation="MASYDVVVEIPKGSRNKYEVDHETGRVYLDRVLFTSFVYPTDYG YFENTLGLDGDPVDVLVLLEYPVFPGVGVAIRPVGVFNMSDEAGIDSKVIGVPAKDPR WAHIQDIDDVPQQTRNEIEHFFEHYKDLEPGKWVKTEGWGDAAEAERIVQAGFEKLQA EGDGHGHGGEPDEDA" misc_feature complement(116894..117361) /locus_tag="CMS_0096" /old_locus_tag="CMS0096" /inference="protein motif:HMMPfam:PF00719" /note="HMMPfam hit to PF00719, Inorganic pyrophosphatase,score 2.4e-56" misc_feature complement(117197..117217) /locus_tag="CMS_0096" /old_locus_tag="CMS0096" /note="PS00387 Inorganic pyrophosphatase signature." gene 117428..118453 /locus_tag="CMS_0097" /old_locus_tag="CMS0097" /db_xref="GeneID:6156090" CDS 117428..118453 /locus_tag="CMS_0097" /old_locus_tag="CMS0097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708885.1" /db_xref="GI:170780553" /db_xref="GeneID:6156090" /translation="MPSERPRLTPAVADLRRAVREALATLPAQPAGPALVALSGGADS LALAAAAAFEGPRAGVAVGAVVVDHGLQDGSADVAARAADAARALGLAPVVVTRVRVD RSASGPEAAARAARYAAFDDALRATGSRALLLAHTLDDQAETVLLGLARGSGAASLHG MARSTPARTAGAVHLRPLLGIRAAITRAACADQGLDPWQDPHNADPSYARVRVRHDVL PVLERELGPGIAVALARTADQLREDDDALEHFAAEMVEEIADHAEAGISLEVASLLAA PPALRHRLIRLAAREEFAAHLSRTHVLEVARLVTDWHGQGPVDLPGVRVLRKDELIVL SARTTEE" misc_feature 117524..118144 /locus_tag="CMS_0097" /old_locus_tag="CMS0097" /inference="protein motif:HMMPfam:PF01171" /note="HMMPfam hit to PF01171, PP-loop, score 3.2e-46" gene 118455..119006 /locus_tag="CMS_0098" /old_locus_tag="CMS0098" /db_xref="GeneID:6156091" CDS 118455..119006 /locus_tag="CMS_0098" /old_locus_tag="CMS0098" /codon_start=1 /transl_table=11 /product="putative hypoxanthine phosphoribosyltransferase" /protein_id="YP_001708886.1" /db_xref="GI:170780554" /db_xref="GeneID:6156091" /translation="MRSTDIADDLTEVLHTQEEIHGRIAEMCREIERDNPGEDLLLVG VLKGAVMVMADLARELALPIHMDWMAVSSYGSGTKSSGVVRILKDLDADLTGRRVLIV EDIIDSGLTLSWLLANLRSRGAASVEVCALLRKPEAAKIAVDVKYVGFEIPDDFVVGY GLDYAERYRNLRDVAILAPHVYS" misc_feature 118479..118913 /locus_tag="CMS_0098" /old_locus_tag="CMS0098" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 9.7e-33" misc_feature 118749..118787 /locus_tag="CMS_0098" /old_locus_tag="CMS0098" /note="PS00103 Purine/pyrimidine phosphoribosyl transferases signature." gene 119164..121164 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /db_xref="GeneID:6156092" CDS 119164..121164 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /codon_start=1 /transl_table=11 /product="cell division protein ftsH-like protein" /protein_id="YP_001708887.1" /db_xref="GI:170780555" /db_xref="GeneID:6156092" /translation="MNFKKLLRSPILIVVLAIVVVSVGFSLITGSGYKTITTQHGLEL IQDGKVASAKIIDGEQRVDLTLASADGDNGTMVQFNYVAQRGGEIVSAITTANPAEGF DDQVPQPSWLLSAFSILLPLLLIGFFIWIMFSGMQGGGNRVMQFGKSKAKLASKDSPK VTFADVAGADEAIEELEEIKDFLKEPAKFQAVGARIPKGVLLYGPPGTGKTLLARAVA GEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKQNAPAIIFVDEIDAVGRHRGAGV GGGNDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDVLDPALLRPGRFDRQIGVDAP DLQGRKQILEVHGRGKPLAAGVDLEVLARKTPGFTGADLANVLNEAALLTARSNAQLI DDRALDEAVDRVMAGPQRRSRIMRDHEKLITAYHEGGHALAAAAMNNTDPVTKVTILP RGRALGYTMVLPLEDKYSVTRNELLDQLTYAMGGRVAEEIVFHDPTTGASNDIEKATS TARRMVTEYGMSAKIGSVKLGSSSGEPFLGRDLGGSRDYSEDMALTVDAEVRALLDGA HDEAWQVINDNRDVLDRLATELLEKETLDHDQLAAIFADVKKLPPRPQWLSSDKRPLS DLPPVPMPQKAPIDQGVVDGAVDSEPPAGKPKRSPFPRPATA" sig_peptide 119164..119262 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /note="Signal peptide predicted for CMS0099 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.604 between residues 33 and 34" misc_feature order(119191..119259,119494..119562) /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /note="2 probable transmembrane helices predicted for CMS0099 by TMHMM2.0 at aa 10-32 and 111-133" misc_feature 119263..119682 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /inference="protein motif:HMMPfam:PF06480" /note="HMMPfam hit to PF06480, Peptidase M41, FtsH extracellular, score 2.1e-28" misc_feature 119758..120321 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 3.1e-94" misc_feature 119773..119796 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 120070..120126 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /note="PS00674 AAA-protein family signature." misc_feature 120337..120969 /locus_tag="CMS_0099" /old_locus_tag="CMS0099" /inference="protein motif:HMMPfam:PF01434" /note="HMMPfam hit to PF01434, Peptidase M41, score 5.2e-113" gene 121170..121760 /locus_tag="CMS_0100" /old_locus_tag="CMS0100" /db_xref="GeneID:6156093" CDS 121170..121760 /locus_tag="CMS_0100" /old_locus_tag="CMS0100" /codon_start=1 /transl_table=11 /product="putative GTP cyclohydrolase I" /protein_id="YP_001708888.1" /db_xref="GI:170780556" /db_xref="GeneID:6156093" /translation="MGVDRARIEAAVAELILAIGEDPAREGLATTPARVAEAYGEFFA GVGADPLRHLQETFPLPETDAAPQPVIVTGIAFRSICEHHLLPFTGVAHLAYVPGERI VGLGRLPRVVDDLASRPQMQERLGEQIAEALEHGLGARGVAVILDAAHGCVTARGTRQ AGSTTITIAARGSLAEPAARAEVLALLPAASGRDRP" misc_feature 121371..121685 /locus_tag="CMS_0100" /old_locus_tag="CMS0100" /inference="protein motif:HMMPfam:PF01227" /note="HMMPfam hit to PF01227, GTP cyclohydrolase I, score 7e-29" gene 121757..122632 /locus_tag="CMS_0101" /old_locus_tag="CMS0101" /db_xref="GeneID:6156094" CDS 121757..122632 /locus_tag="CMS_0101" /old_locus_tag="CMS0101" /codon_start=1 /transl_table=11 /product="putative dihydropteroate synthase" /protein_id="YP_001708889.1" /db_xref="GI:170780557" /db_xref="GeneID:6156094" /translation="MTTTPPVARTLVMGILNATPDSFSDGGRHLALDDALAHARRMVA AGADLVDVGGESTRPGAARVDAAEERARVVPVVRELAAEGIAVSVDTMRAATAEACVA VGARIVNDVSGGLADPGMAAVVAGADVDYVAMHWRGHSDMMAARATYADTVGEVRDEL LARIDALVAAGLDPARVILDPGLGFAKDAAHDWQLLGSLDALTGLGHRVLVGASRKRF LGRLLPEGAGVEDRDVPTAVVSALSARAGAWAVRVHDVASTRAAIGVEAAWARGRAEA LDAASAGWSAAGLSE" misc_feature 121790..121837 /locus_tag="CMS_0101" /old_locus_tag="CMS0101" /note="PS00792 Dihydropteroate synthase signature 1." misc_feature 121799..122425 /locus_tag="CMS_0101" /old_locus_tag="CMS0101" /inference="protein motif:HMMPfam:PF00809" /note="HMMPfam hit to PF00809, Dihydropteroate synthase,DHPS, score 1.1e-92" misc_feature 121892..121933 /locus_tag="CMS_0101" /old_locus_tag="CMS0101" /note="PS00793 Dihydropteroate synthase signature 2." gene 122637..123347 /locus_tag="CMS_0102" /old_locus_tag="CMS0102" /db_xref="GeneID:6156095" CDS 122637..123347 /locus_tag="CMS_0102" /old_locus_tag="CMS0102" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708890.1" /db_xref="GI:170780558" /db_xref="GeneID:6156095" /translation="MSAVSQDRVVVAPQAVLVRTAVAALVASVILGVGLTVPADLAAD SGAAVVVAKVVAIVLGLIGSLGSAYASVVLLSPVLTTVGALLWPTAVVLLGTPLGIVC ALAFAPVAPEGDASDPVLALVAAVLAVLGIAAAIACAVVQRRVARLAANARRVTETGR RTAAIVTAVQRLDGSGDAVRARLTVAFTDADGRDHHVTRTVTTADRLLPAVGGKLPLW YDPADPGDLPSIVVGRSW" sig_peptide 122637..122765 /locus_tag="CMS_0102" /old_locus_tag="CMS0102" /note="Signal peptide predicted for CMS0102 by SignalP 2.0 HMM (Signal peptide probability 0.964) with cleavage site probability 0.509 between residues 43 and 44" misc_feature order(122697..122765,122793..122861,122880..122948, 122991..123059) /locus_tag="CMS_0102" /old_locus_tag="CMS0102" /note="4 probable transmembrane helices predicted for CMS0102 by TMHMM2.0 at aa 21-43, 53-75, 82-104 and 119-141" gene 123341..124264 /locus_tag="CMS_0103" /old_locus_tag="CMS0103" /db_xref="GeneID:6156096" CDS 123341..124264 /locus_tag="CMS_0103" /old_locus_tag="CMS0103" /EC_number="4.1.2.25" /codon_start=1 /transl_table=11 /product="bifunctional folate synthesis protein" /protein_id="YP_001708891.1" /db_xref="GI:170780559" /db_xref="GeneID:6156096" /translation="MVTGLPTDRILLTGLRVHAHHGVFAEERRDGQPFVIDLEVALDL APAGGSDELGRTLHYGELADEVAAAAERDPVDLIETLAERVAGVVLAHPVARWVRVTV HKPDAPIAVPFDDVAVVIERASALPAPGETVRAVVAVGSNLGDRRATIERALALIDEV PGLRVVRSSDLVESVAVTPAGEDPTKPGYLNGVVLVDAAIGPHALLDALAGIERDLGR VRAERWGDRTIDLDVVAHGDARIHDDRLTLPHPRAAERAFVLAPWLQADPDAELPGRG RVDALLAALEPDAADPAAAAVPAASAAEARA" misc_feature 123368..123706 /locus_tag="CMS_0103" /old_locus_tag="CMS0103" /inference="protein motif:HMMPfam:PF02152" /note="HMMPfam hit to PF02152, Dihydroneopterin aldolase,score 2.1e-34" misc_feature 123746..124138 /locus_tag="CMS_0103" /old_locus_tag="CMS0103" /inference="protein motif:HMMPfam:PF01288" /note="HMMPfam hit to PF01288,7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK,score 2e-42" gene 124261..124743 /locus_tag="CMS_0104" /old_locus_tag="CMS0104" /db_xref="GeneID:6156097" CDS 124261..124743 /locus_tag="CMS_0104" /old_locus_tag="CMS0104" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708892.1" /db_xref="GI:170780560" /db_xref="GeneID:6156097" /translation="MTRTRSTTLIALLIAGAAVGWFAENALLMSGRALLIPPLTLGAT LLIIGIVLLALARPIRRSTLGRTPGRVDPFRATRVVLLAKASALAGALLTGVTGGVLA FVLARPVLPGASSVGLAVAGTVGAVVLLVAGLVAEHWCTVPPDDRDDSRPGDPARELS" sig_peptide 124261..124344 /locus_tag="CMS_0104" /old_locus_tag="CMS0104" /note="Signal peptide predicted for CMS0104 by SignalP 2.0 HMM (Signal peptide probability 0.991) with cleavage site probability 0.260 between residues 28 and 29" misc_feature order(124279..124347,124360..124428,124498..124566, 124594..124662) /locus_tag="CMS_0104" /old_locus_tag="CMS0104" /note="4 probable transmembrane helices predicted for CMS0104 by TMHMM2.0 at aa 7-29, 34-56, 80-102 and 112-134" gene 124794..125282 /locus_tag="CMS_0105" /old_locus_tag="CMS0105" /db_xref="GeneID:6156098" CDS 124794..125282 /locus_tag="CMS_0105" /old_locus_tag="CMS0105" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708893.1" /db_xref="GI:170780561" /db_xref="GeneID:6156098" /translation="MTPNVDPHGVSWRRVSPRLVGVELVGGVITALVLGGIAAFLFAV DAPRWLPIVLGAAALVELVVTLVIVPRRVRAMGYQLRDDDLVFRRGIMWTRIVAVPYG RMQLVDITRGPVGRVLGLADLKLVTAAAAASIQIPGLTNADAEELRDRLVALAETRRA GL" misc_feature order(124851..124919,124932..125000) /locus_tag="CMS_0105" /old_locus_tag="CMS0105" /note="2 probable transmembrane helices predicted for CMS0105 by TMHMM2.0 at aa 20-42 and 47-69" misc_feature 125007..125246 /locus_tag="CMS_0105" /old_locus_tag="CMS0105" /inference="protein motif:HMMPfam:PF03703" /note="HMMPfam hit to PF03703, Bacterial membrane-flanked domain, score 6.4e-17" gene 125279..127144 /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /db_xref="GeneID:6156099" CDS 125279..127144 /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708894.1" /db_xref="GI:170780562" /db_xref="GeneID:6156099" /translation="MSDPTPEDPAAGPPAAAPAGSAPGPGSAAVPAAEALIAEELTDG DWHRLHPATPVLRGGVLFIVAIGFLVSSLREQLVEQFVPGQRRDGEQDLIPMLVETGS LIWVIVALLAFTVLAVGVSYLSWRMHTFRVTEETVEVRSGIVSRTNRRARLDRIQGVN IVRPLIARLIGAAKLEIQVAGNDANLPLQYLRSRDADAFRLRVLRLASGARADAAGSR PAARAAVGGTARGFVGSRVDDFLAPELDPDAAPPQSVVRIPVPRLVGAVLLSAPTVVL VLFVAVGIPLIVRFEAWYLLVPLLPMLLGSAGFFVRRITRSLRYSVAGTPDGVRVGFG LLSTSNDTIPPGRIHAVEVVQPLLWRASGWWEIRITRASHSSSPGAAGQQNTSILPVG DRRDVDRVLGLVLPDLVGEQALRLVAVGMTGRGGEDDGFTTSPRRAWILKPFSWRRTG FAVDASAFLVRRGMIWRRLVIVPHARTQGVDLTQGPIDRRLDLVSVRAATVAGPVDTR LGAIDRATGMELSTRLVAAAVASARSDTSAHWGAEAASWPAPGSASAAAAAAPAAAAP APEPAPPAPAAPAPAPSPGPVDAPRDPTPTPTPDAAWPPPAADAPRHRSAPEDPA" misc_feature order(125585..125653,126074..126142,126152..126211) /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /note="3 probable transmembrane helices predicted for CMS0106 by TMHMM2.0 at aa 103-125, 266-288 and 292-311" misc_feature 125648..125887 /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /inference="protein motif:HMMPfam:PF03703" /note="HMMPfam hit to PF03703, Bacterial membrane-flanked domain, score 5.2e-09" misc_feature 126224..126490 /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /inference="protein motif:HMMPfam:PF03703" /note="HMMPfam hit to PF03703, Bacterial membrane-flanked domain, score 1.6e-10" misc_feature 126611..126850 /locus_tag="CMS_0106" /old_locus_tag="CMS0106" /inference="protein motif:HMMPfam:PF03703" /note="HMMPfam hit to PF03703, Bacterial membrane-flanked domain, score 2.3e-11" gene 127141..127902 /locus_tag="CMS_0107" /old_locus_tag="CMS0107" /db_xref="GeneID:6156100" CDS 127141..127902 /locus_tag="CMS_0107" /old_locus_tag="CMS0107" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708895.1" /db_xref="GI:170780563" /db_xref="GeneID:6156100" /translation="MTAPSQRSGRLGVGIVGAGHVGPVLGAALAGAGHAITGISAVSA ASRERAEAMLPGVPVLEIPDLIERSELVILAVPDAELPGLVAGLAATGAWQAGQLVVH TSAAHGIQVLAPAFASGIIPLAIHPAMSFTGTSMDLSRMVDSWFAVTAPAPVLPIAQV LVVEMGGEPVVVEERDRPAYAEAIATATTFSTAIVDQAAGLLAGIGVEEPGRVLGPLI RSAVDDALRRSSPAGGARLTSGDVPLPTDEGPAAH" sig_peptide 127141..127272 /locus_tag="CMS_0107" /old_locus_tag="CMS0107" /note="Signal peptide predicted for CMS0107 by SignalP 2.0 HMM (Signal peptide probability 0.763) with cleavage site probability 0.475 between residues 44 and 45" gene 127945..128823 /gene="panC" /locus_tag="CMS_0108" /old_locus_tag="CMS0108" /db_xref="GeneID:6156101" CDS 127945..128823 /gene="panC" /locus_tag="CMS_0108" /old_locus_tag="CMS0108" /note="catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine" /codon_start=1 /transl_table=11 /product="pantoate--beta-alanine ligase" /protein_id="YP_001708896.1" /db_xref="GI:170780564" /db_xref="GeneID:6156101" /translation="MTIPAPTVVTGIAELRARVRDHRAARTAAGEAPVVVLVPTMGAL HEGHLAHARRARELGSLVVVSIFVNPLQFGAGEDLDAYPRTLDADVAALAETGVDLVF APSAAEMYPDGPARIRVTGGSVALTLEGRSRPGHFDGMLTVVAKLLHIIAPDVATFGR KDAQQLHLVRRMVRDLDLPVRIEDLETVREPDGLALSSRNRYLDDRERRAARVIPAAL EAAQSAGSRGIDAVIAAAQSVVMGEPAVALDYFQVVDPASFASVDDGFRGVALAVIAA RVGSTRLIDNETVVIA" misc_feature 127960..128811 /gene="panC" /locus_tag="CMS_0108" /old_locus_tag="CMS0108" /inference="protein motif:HMMPfam:PF02569" /note="HMMPfam hit to PF02569, Pantoate-beta-alanine ligase, score 1.7e-101" gene 128939..130480 /gene="lysS" /locus_tag="CMS_0109" /old_locus_tag="CMS0109" /db_xref="GeneID:6156102" CDS 128939..130480 /gene="lysS" /locus_tag="CMS_0109" /old_locus_tag="CMS0109" /EC_number="6.1.1.6" /note="class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1" /codon_start=1 /transl_table=11 /product="lysyl-tRNA synthetase" /protein_id="YP_001708897.1" /db_xref="GI:170780565" /db_xref="GeneID:6156102" /translation="MTDSPGTPATPETAPAPAVEGSAEDVAEQKAVRLAKRARLNAQG GPGEGAYPVQVPVTTTIPAVRAEHGHLEPGEETDHVVGIAGRVVHFRNTGKLCFATLQ AGDGTRIQAMISLAEVGDEALAAWKELVDLGDHVFVGGRVIASRKGELSIMASEWRIA SKALLPLPNLHSELSDETRVRSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVE VETPMLQVMHGGASARPFVTHSNAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFR NEGADSTHSPEFAMLEAYEAYGDYTSIAELTQTLVQDAAMAVAGSHVVTWADGTDYDL GGEWDRISMYASLSEAAGIEITPATSVDELQAIADREGVDVHLSTHGKLVEELWEHFV KGSLERPTFVLDFPVETSPLTRAHRSIEGVVEKWDLYIRGFELATGYSELVDPVVQRE RFVDQARQLARGDDEAMPLDEEFLRALEHGMPPSGGMGMGVDRLLMAITGLGIRETIL FPLVK" misc_feature 129179..129418 /gene="lysS" /locus_tag="CMS_0109" /old_locus_tag="CMS0109" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 5.4e-13" misc_feature 129461..130477 /gene="lysS" /locus_tag="CMS_0109" /old_locus_tag="CMS0109" /inference="protein motif:HMMPfam:PF00152" /note="HMMPfam hit to PF00152, tRNA synthetase, class II (D, K and N), score 6.2e-118" misc_feature 129761..129814 /gene="lysS" /locus_tag="CMS_0109" /old_locus_tag="CMS0109" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." gene 130493..130618 /locus_tag="CMS_0110" /old_locus_tag="CMS0110" /db_xref="GeneID:6156103" CDS 130493..130618 /locus_tag="CMS_0110" /old_locus_tag="CMS0110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708898.1" /db_xref="GI:170780566" /db_xref="GeneID:6156103" /translation="MPLGPDGSNPKKPTTARYALWIIVGGIAVVMIGQGVYGILT" misc_feature 130544..130612 /locus_tag="CMS_0110" /old_locus_tag="CMS0110" /note="1 probable transmembrane helix predicted for CMS0110 by TMHMM2.0 at aa 18-40" gene 130640..130822 /locus_tag="CMS_0111" /old_locus_tag="CMS0111" /db_xref="GeneID:6156104" CDS 130640..130822 /locus_tag="CMS_0111" /old_locus_tag="CMS0111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708899.1" /db_xref="GI:170780567" /db_xref="GeneID:6156104" /translation="MDDFWASAIWSILPTLGVGLIFWFIMRAVIQADKQERKAYAAIE AKERARMGVPAPDADL" misc_feature 130649..130717 /locus_tag="CMS_0111" /old_locus_tag="CMS0111" /note="1 probable transmembrane helix predicted for CMS0111 by TMHMM2.0 at aa 4-26" gene 130984..133494 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /db_xref="GeneID:6156105" CDS 130984..133494 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /codon_start=1 /transl_table=11 /product="Clp family ATP-binding protease" /protein_id="YP_001708900.1" /db_xref="GI:170780568" /db_xref="GeneID:6156105" /translation="MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGV AAKALESLGISLDAVREQVQDIIGQGQQQPTGHIPFTPRAKKVLELSLREALQLGHNY IGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEAVAVGGEAQQS QQAGSTVLDQFGRNLTQAARDGKLDPVIGREKEIERVMQILSRRSKNNPVLIGEPGVG KTAVVEGLAQAIVKGDVPETLKDKQLYTLDLGSLIAGSRYRGDFEERLKKVTKEIRTR GDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATTLDEYRKHFEKDAA LERRFQPIQVQEPSLPHTINILKGLRDRYEAFHKVSITDGAIVSAANLADRYIADRFL PDKAIDLIDEAGARLRLSILSAPPELREFDERISTVRVAKETAIEDQDFEKAASLRDE EKNLLGERLRLEKQWRSGDVRTTAEVDEGLIAEVLAQATGIPVFKLTEEESSRLVFME KALHQRVIGQEEAISALSKTIRRTRAGLKDPRRPSGSFIFAGPTGVGKTELAKALAEF LFDDEDALISLDMSEYGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEI EKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGTKDITGAPVGFQVENN AANSYERMKGKVSEELKKNFKPEFLNRVDDTIVFPQLSKPELLQIVDLFVKRLSDRMM DRDLTITLETAAKERLIEVGFDPSLGARPLRRAVQHEIEDRLSERILQGELNAGDHVH VDYVDDQFTFVTTQREGISVAAGIGTGTGTPDLAITSE" misc_feature 131029..131187 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /inference="protein motif:HMMPfam:PF02861" /note="HMMPfam hit to PF02861, Clp, N terminal, score 8.4e-22" misc_feature 131254..131412 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /inference="protein motif:HMMPfam:PF02861" /note="HMMPfam hit to PF02861, Clp, N terminal, score 3.2e-20" misc_feature 131605..132186 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 5e-06" misc_feature 131620..131643 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 132247..132354 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /inference="protein motif:HMMPfam:PF02151" /note="HMMPfam hit to PF02151, UvrB/UvrC protein, score 6.3e-07" misc_feature 132604..133122 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /inference="protein motif:HMMPfam:PF07724" /note="HMMPfam hit to PF07724, ATPase family associated with various cellular activities (AAA), score 1.1e-100" misc_feature 132631..132654 /locus_tag="CMS_0112" /old_locus_tag="CMS0112" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 133655..134542 /gene="galE" /locus_tag="CMS_0113" /old_locus_tag="CMS0113" /db_xref="GeneID:6156106" CDS 133655..134542 /gene="galE" /locus_tag="CMS_0113" /old_locus_tag="CMS0113" /EC_number="5.1.3.2" /codon_start=1 /transl_table=11 /product="udp-glucose 4-epimerase (galactowaldenase) (udp-galactose 4-epimerase)" /protein_id="YP_001708901.1" /db_xref="GI:170780569" /db_xref="GeneID:6156106" /translation="MRIAVTGGSGKLGRHVVADLRAHGHEVTNIDQVGERGSGYVRVD TTDYGQVVDALFGVQDLHEGFDAIVHLAAIPAPAILSDVATFHNNMLTSFNVFQAARR AGIKKVVYASSETVLGLPFDVPPPYIPVDEEYPAQPNSTYSLVKHLEEQMAIELCRWD PELQVTALRFSNVMDVDDYDGFPGFDDDALARKWNLWGYIDGRDGAQAVRKALEHDAP GFDRFIVANADTVMSRSSAELAAEVFPGVEVTKELGEHETLLSIDKARRILGYAPEHT WRDHAPADAGDDPVAGHPS" gene 134539..135516 /locus_tag="CMS_0114" /old_locus_tag="CMS0114" /db_xref="GeneID:6158706" CDS 134539..135516 /locus_tag="CMS_0114" /old_locus_tag="CMS0114" /codon_start=1 /transl_table=11 /product="putative aldo/keto reductase" /protein_id="YP_001708902.1" /db_xref="GI:170780570" /db_xref="GeneID:6158706" /translation="MRYVRLGSTGTEVSAIALGCMSYGEPTRGGHAWTLGEEDSIPLI RRAVELGITFFDTANVYSDGSCEEITGRALKAMTKREEVVIATKVHGAMGEGPNSRGL SRKHIMWQIDESLRRLGTDYVDLYQIHRFDPATPLEETLEALDDLVRVGKVRYIGASS MDAWRFSKALHLQRANGWARFVTMQDHYNLVNREEEREMLPLCADEGVGSLPWSPLAR GRLTRDWDASTARSETDEFGKTLYAAQEDSDRRVAAAVAEVAEARGVPRAQVALAWVS RNPVVTAPIVGGTKVAHIEDAVASLDIELTADEVARLEEHYVPHAVVGY" misc_feature 134557..135492 /locus_tag="CMS_0114" /old_locus_tag="CMS0114" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 2.1e-72" gene 135788..136333 /gene="rplJ" /locus_tag="CMS_0115" /old_locus_tag="CMS0115" /db_xref="GeneID:6156107" CDS 135788..136333 /gene="rplJ" /locus_tag="CMS_0115" /old_locus_tag="CMS0115" /note="binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L10" /protein_id="YP_001708903.1" /db_xref="GI:170780571" /db_xref="GeneID:6156107" /translation="MSGNHVIRSAMANKEASVAELAEKFRSSNAVLLTEYRGLTVAQL KQLRKSISADATYAVVKNTLTKIAANQAGISSFDDELVGPSAIAFVHGDTVAVAKALR TFTKANPLLVVKGGYFDGNPLTADEVNKLADLESREVLLGKLAGAFKASLFGAAYLFN APLSQAVRTVEALREKQESAQ" misc_feature 135812..136105 /gene="rplJ" /locus_tag="CMS_0115" /old_locus_tag="CMS0115" /inference="protein motif:HMMPfam:PF00466" /note="HMMPfam hit to PF00466, Ribosomal protein L10,score 1.9e-28" misc_feature 135890..135931 /gene="rplJ" /locus_tag="CMS_0115" /old_locus_tag="CMS0115" /note="PS01109 Ribosomal protein L10 signature." gene 136408..136791 /gene="rplL" /locus_tag="CMS_0116" /old_locus_tag="CMS0116" /db_xref="GeneID:6156108" CDS 136408..136791 /gene="rplL" /locus_tag="CMS_0116" /old_locus_tag="CMS0116" /note="present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L7/L12" /protein_id="YP_001708904.1" /db_xref="GI:170780572" /db_xref="GeneID:6156108" /translation="MAKLSNDELIEAFKELTLIELSDFVKKFEEVFEVTAAAPVAAAA APGAAAPAEEVEEKTAFDVILEAAGDKKIQVIKEVRALTSLGLGEAKALVDGAPKAVL EGANKEAADKAKAQLEAAGATVTVK" misc_feature 136588..136788 /gene="rplL" /locus_tag="CMS_0116" /old_locus_tag="CMS0116" /inference="protein motif:HMMPfam:PF00542" /note="HMMPfam hit to PF00542, Ribosomal protein L7/L12,score 8.9e-33" gene complement(136870..138492) /locus_tag="CMS_0117" /old_locus_tag="CMS0117" /db_xref="GeneID:6156109" CDS complement(136870..138492) /locus_tag="CMS_0117" /old_locus_tag="CMS0117" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_001708905.1" /db_xref="GI:170780573" /db_xref="GeneID:6156109" /translation="MMSDAPTIDGLERAIGDALDGGADAQAATLLADGWPLHVDLHSD RIRALYDRLDPERWEDDVWLVTGMAATYRGAVASDRRASIAYRSALDLLLTADPAPGA PTRAAVLVHRAAGDRRVGRLAEARDSLDEARGILDTERGIPLQERITLQARVALQHGL VLTHLGDFVGAREELRIAEGLGERHLVLADRLECRGALAYLAYCLGEIEEARDLVVRA RGLLASPGADPALSRSGFLAPAEIAAAMIAVDETRQDDAMLIVEGLRPASDGTDWELL ARYAEATVAAIRGLRLDALEHLRRLHNLGVGWAEHGPMPTMRDTLRASLLAHLDQPAA AWDLLRMLQPTAQHSTCPAMIAGRLRVQADDHVGALAQMAECLALGDAHSGRTLDDVL LVVAAAHHGLGDHARSDHAFDRAALHAVSTGVLRPFAVFPAAASHALLDRALARDQHP DVREVLEGVRAGQVRVEAAPVEPLTDRERIIVACLADGLTVTQIAGRLFISPNTVKSH IRTAYRKLDARSRSEAVERARALGHDLRPGSA" misc_feature complement(136909..137082) /locus_tag="CMS_0117" /old_locus_tag="CMS0117" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 1.3e-20" misc_feature complement(136963..137028) /locus_tag="CMS_0117" /old_locus_tag="CMS0117" /note="Predicted helix-turn-helix motif with score 1502.000, SD 4.30 at aa 489-510, sequence LTVTQIAGRLFISPNTVKSHIR" misc_feature complement(137479..137523) /locus_tag="CMS_0117" /old_locus_tag="CMS0117" /note="PS00678 Trp-Asp (WD) repeats signature." gene 138650..139099 /locus_tag="CMS_0118" /old_locus_tag="CMS0118" /db_xref="GeneID:6156110" CDS 138650..139099 /locus_tag="CMS_0118" /old_locus_tag="CMS0118" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001708906.1" /db_xref="GI:170780574" /db_xref="GeneID:6156110" /translation="MTDHDLRTLLGDLVTAGHRLTRLAAHEVGGSSSPAVWRTLSVLV TWPGGMRLGVLAERSRVSQPTTTKIVRSLVGQGWIAQVTDPSDARASLLEITPAGRAA LDDWRDRLATALVPRFADLPADDVAVLARAVEVVMSRIDGAPASARD" misc_feature 138743..139057 /locus_tag="CMS_0118" /old_locus_tag="CMS0118" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.1e-15" misc_feature 138797..138862 /locus_tag="CMS_0118" /old_locus_tag="CMS0118" /note="Predicted helix-turn-helix motif with score 1102.000, SD 2.94 at aa 50-71, sequence MRLGVLAERSRVSQPTTTKIVR" gene 139192..140424 /locus_tag="CMS_0119" /old_locus_tag="CMS0119" /db_xref="GeneID:6156111" CDS 139192..140424 /locus_tag="CMS_0119" /old_locus_tag="CMS0119" /codon_start=1 /transl_table=11 /product="major facilitator superfamily transporter protein" /protein_id="YP_001708907.1" /db_xref="GI:170780575" /db_xref="GeneID:6156111" /translation="MSTQQHASFRDIFRQPRSVFAVAFACVIAFMGIGLVDPILPAIA SSLDATATEAELLFTSYLLVTGLAMLITSWISSRIGAKRTLLIGLAIIVVFAAAAGLS QDVEQVIGFRAGWGLGNALFISTALATIVGSASGGTASAIMLYEAALGLGIAIGPLLG GLLGSWSWRGPFFGTATLMAVGFVAILALLGKDDAPRAPMRLSAPLRALRTPALAVLA AAALFYNIGFFELLAYTPFPLGFDAIGLGLTFFGWGVGLAITSVLVAPLLTRRMARTS VLRLMLPLLAVDLAAAGLVVRSAAGLVTCVIVGGLLLGVLNTVLTECVMEATDHPRSV ASSAYSSVRFLGGAIAPPAATELANLFSDATPYYAAAGSVLVALVIVVAGHRWLRCVD AEPVDALEEAQAVTAGDA" sig_peptide 139192..139323 /locus_tag="CMS_0119" /old_locus_tag="CMS0119" /note="Signal peptide predicted for CMS0119 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.351 between residues 44 and 45" misc_feature order(139252..139320,139363..139422,139441..139500, 139528..139596,139615..139683,139693..139761, 139822..139890,139918..139986,140020..140073, 140083..140151,140188..140256,140284..140343) /locus_tag="CMS_0119" /old_locus_tag="CMS0119" /note="12 probable transmembrane helices predicted for CMS0119 by TMHMM2.0 at aa 21-43, 58-77, 84-103, 113-135,142-164, 168-190, 211-233, 243-265, 277-294, 298-320,333-355 and 365-384" misc_feature 139255..140268 /locus_tag="CMS_0119" /old_locus_tag="CMS0119" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily, score 1.2e-38" gene complement(140479..141513) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /db_xref="GeneID:6156112" CDS complement(140479..141513) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001708908.1" /db_xref="GI:170780576" /db_xref="GeneID:6156112" /translation="MRGSAMSAIADVARLAGVSKATASRALSGRGYVSPATRTRVSDA AAEIGYVVSSNASSLVTGQSKNVGVVMPFINRWFFAELLEGIEEALIEADYDLTLYRL TADPEQRRKVFEYFLVRKRVDAVIAVSVALTPAEVVRLRALDKPLVGIGGPVEGMSTL SIDDEAAARLATEHLLSLGHARVVHLGGDLHAQMAFFVHAKRLAGYRAAIDADPRGLE ARFATAEFTIDGGFRSAMALLADPRTRPTAVFAASDEIAIGTILAARQLGIAVPAELS VAGIDGHALAPLFGLTTVEQHPRTQGRAAVGMVLEGLAPEGAAERAVTLPVDFQARSS TTAPPAPPAP" misc_feature complement(140515..141324) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 4.5e-07" misc_feature complement(141418..141495) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 2.1e-08" misc_feature complement(141430..141495) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /note="Predicted helix-turn-helix motif with score 1498.000, SD 4.29 at aa 7-28, sequence SAIADVARLAGVSKATASRALS" misc_feature complement(141433..141489) /locus_tag="CMS_0120" /old_locus_tag="CMS0120" /note="PS00356 Bacterial regulatory proteins, lacI family signature." gene 141812..143176 /locus_tag="CMS_0121" /old_locus_tag="CMS0121" /db_xref="GeneID:6156113" CDS 141812..143176 /locus_tag="CMS_0121" /old_locus_tag="CMS0121" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding transport protein" /protein_id="YP_001708909.1" /db_xref="GI:170780577" /db_xref="GeneID:6156113" /translation="MGHALFRRRFAAPLAAVGIAGLALTGCTGDIAAEDAADTDCSPY SSYGTFQGSPEVSIGGTIQDDEADRLVESWKDFETCTGIKVNYQGTKEFEAQIAVLAE GQSAPDIGIIPQPGLFNVLATKGYLQPAPAAVEENVDKNWSTDWKGYGTVDGKFIGAP LMASVKGYVWYSPAEFKEKGYEIPKSTAELMDLTKKIADEGDHKPWCAGIGSGDATGW PGTDWVESFVIRQSGAETYDKWVTHQIPFNDPAIVKAFDAAGEIFKNPDYVNGGLGDV SSIISTEFGDAGLPLLDGKCSLHLQASFYEGFWKKADGTDAKVSPDGDVYAFLLPQTN EGDATTVTGGGELVGAFRSSDEITAVLSYLSSDTWANNRVKLGGVISANKGLDPANAS SDILKQSIKILQDPNATFRFDGSDLMPGAVGTDSFWKGIVGWLSGDSTQKTVDAIESS WPAS" sig_peptide 141812..141910 /locus_tag="CMS_0121" /old_locus_tag="CMS0121" /note="Signal peptide predicted for CMS0121 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.765 between residues 33 and 34" misc_feature 141842..142924 /locus_tag="CMS_0121" /old_locus_tag="CMS0121" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 3.1e-09" misc_feature 141860..141892 /locus_tag="CMS_0121" /old_locus_tag="CMS0121" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 143312..144283 /locus_tag="CMS_0122" /old_locus_tag="CMS0122" /db_xref="GeneID:6156114" CDS 143312..144283 /locus_tag="CMS_0122" /old_locus_tag="CMS0122" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001708910.1" /db_xref="GI:170780578" /db_xref="GeneID:6156114" /translation="MTTADLIGKILQVVVALAVFAVVIGLMLFLIDKAPKRGKDWVQL GAFVLPALILLAVGLIYPAFRTTLLAFRDNTGEWAGFDNFVWMFTQPAALRTLLNTII WVVFVPLLSTAIGLAYAVFIDKSRGEKYFKALVFMPMAISFVGAGIIWRFVYDYKSGD NAQIGLLNQILVWTGQEPVQWLQTSPINTALLIIVMIWIQTGFAMVVLSASIKGVPTE QIEAAQLDGTNAWQRFTNVTLPGIRGSLVVVVTTISIATLKVFDIVRTMTAGNFDTSV IANEMYTQAFRAGEQGRGSALAIVLFLMVLPIVIYNVRVMSKQREIR" misc_feature order(143339..143404,143441..143509,143609..143677, 143711..143770,143879..143947,144035..144103, 144182..144250) /locus_tag="CMS_0122" /old_locus_tag="CMS0122" /note="7 probable transmembrane helices predicted for CMS0122 by TMHMM2.0 at aa 10-31, 44-66, 100-122, 134-153,190-212, 242-264 and 291-313" misc_feature 143588..144274 /locus_tag="CMS_0122" /old_locus_tag="CMS0122" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.7e-08" misc_feature 143945..144031 /locus_tag="CMS_0122" /old_locus_tag="CMS0122" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 144280..145269 /locus_tag="CMS_0123" /old_locus_tag="CMS0123" /db_xref="GeneID:6156115" CDS 144280..145269 /locus_tag="CMS_0123" /old_locus_tag="CMS0123" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001708911.1" /db_xref="GI:170780579" /db_xref="GeneID:6156115" /translation="MSVAPADLPVADRGTRRGTIEQAASVGAKSRRVKNRLTSRRATL AALIIAVLWTLPTFGLFVSSFRPAGLIQTTGWWTIFQNPGFTLDNYQDVLLSTSQSSP QLGSYFVNSLAIAIPATLFPLVIASMAAYAFAWIKFKGSNFLFVLIFALQIVPLQMAL IPLLQMFTRTLRPLQEAVHGVIPLIPEQGYLPVWVAHTIFALPLAIFLLHNFISEIPG EVIEAARVDGASHGQVFFRIVLPLALPAIASFAIFQFLWVWNDLLVALIFSGGTPDVA PLTQRLAELTGTRGQDWQRLTAAAFVSLIVPLIVFFSLQRYFVRGLLAGSTKG" misc_feature order(144406..144474,144616..144684,144703..144771, 144850..144918,144979..145047,145168..145236) /locus_tag="CMS_0123" /old_locus_tag="CMS0123" /note="6 probable transmembrane helices predicted for CMS0123 by TMHMM2.0 at aa 43-65, 113-135, 142-164,191-213, 234-256 and 297-319" misc_feature 144601..145251 /locus_tag="CMS_0123" /old_locus_tag="CMS0123" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.6e-19" misc_feature 144916..145002 /locus_tag="CMS_0123" /old_locus_tag="CMS0123" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 145552..147246 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /db_xref="GeneID:6156116" CDS 145552..147246 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /codon_start=1 /transl_table=11 /product="putative integral membrane, nucleotide-binding ABC transporter subunit" /protein_id="YP_001708912.1" /db_xref="GI:170780580" /db_xref="GeneID:6156116" /translation="MLVGAGLTVVPPLLTQQAFDRGLFPPTGGPDIPVLVELVAIMIA IWVVGAGLGVWQTYLTATVGNRVMGSMRVDLFRHLQSMELGFFTRTKTGVIQSRLQND VGGVAAVLTNTVSSVLGNTVTVIAALVAMLVLNWQLTLVAVILMPVLVVAQPRVGQVR ARIASKTQESLSDMTAITQETLSVSGILLSKSFSRQAAETERYEAENRNQIRLQVSQQ MSGQWFFALVQIFLSIIPAIVYVVAGFLITGGVSVTAGTIVAFTTVQARLMWPLIGLM RVALDLQTSGALFARIFEYLDLEPAIRDRHDARPVSAGPALGRVAFDEVRFSYPDTRA GERPTLDGMSFEIQPGQFAAFVGPSGAGKTTVSYLIPRFHDVTGGRVLFSGADVRDLE QESLLENIGIVSQETYLFHATIGENLRYARPDATQEQIEQAARAANIHQTIESFPDGY ETLVGERGYRLSGGEKQRIAIARVLLKDPAVLILDEATSALDAISERVVQQALDTASR GRTTIAIAHRLSTVVDADVIFVVVAGRIVEQGTHVELLARGGEYARLYSDQRTAAA" misc_feature 145552..146367 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 2.6e-25" misc_feature order(145648..145716,145858..145926,145939..146007, 146218..146286) /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /note="4 probable transmembrane helices predicted for CMS0124 by TMHMM2.0 at aa 33-55, 103-125, 130-152 and 223-245" misc_feature 146599..147153 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.3e-53" misc_feature 146620..146643 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 146932..146976 /locus_tag="CMS_0124" /old_locus_tag="CMS0124" /note="PS00211 ABC transporters family signature." gene complement(147342..148109) /locus_tag="CMS_0125" /old_locus_tag="CMS0125" /db_xref="GeneID:6156117" CDS complement(147342..148109) /locus_tag="CMS_0125" /old_locus_tag="CMS0125" /note="Appears to have an N-terminal extension relative to homologues." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708913.1" /db_xref="GI:170780581" /db_xref="GeneID:6156117" /translation="MTDRGTDGSERPDEGDVVIDHVPDDDIREEELDGLVAHGEASRA RGRRIRIGLAAGIVAVALVVAGLLVGRVTAPVSALTPSTNSAEAGFSRDMQVHHEQAV QMSLMIIDRTDDPEVKLIAQDIAQAQAQQAGQMYAFLTSWGLDQAPSQPRMTWMTLPT LDGKTDHSSMDMTPGATMPGLASQADLDELQSLTGVEAERKYLTLMIAHHRGGVEMAQ ALLDRSRNPLVTDLANGMVMIQDKEILYMQQLLDARS" misc_feature complement(147357..147515) /locus_tag="CMS_0125" /old_locus_tag="CMS0125" /inference="protein motif:HMMPfam:PF03713" /note="HMMPfam hit to PF03713, Protein of unknown function DUF305, score 1.1e-11" misc_feature complement(147693..147851) /locus_tag="CMS_0125" /old_locus_tag="CMS0125" /inference="protein motif:HMMPfam:PF03713" /note="HMMPfam hit to PF03713, Protein of unknown function DUF305, score 3e-05" misc_feature complement(147891..147959) /locus_tag="CMS_0125" /old_locus_tag="CMS0125" /note="1 probable transmembrane helix predicted for CMS0125 by TMHMM2.0 at aa 65-87" gene complement(148112..148801) /locus_tag="CMS_0126" /old_locus_tag="CMS0126" /db_xref="GeneID:6156118" CDS complement(148112..148801) /locus_tag="CMS_0126" /old_locus_tag="CMS0126" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708914.1" /db_xref="GI:170780582" /db_xref="GeneID:6156118" /translation="MARRDDTTPSGDESGRPVPPTAEKVAALKKQQDRARRNRLIGII TGSVAAVAVVAVVIGVVVSSGTPKQDPADISIEGLRTWDSLPSTHVQTPVDYAGLYAG MSPPAGGEHNPMWLNCGIYDQPQPNENAVHDLEHGAVWITYDAAKLTGDDLSKLQKYA ESFGGYVTMSPYEGLDTPIALSAWGAQVKVDSVDDQRIKDFMAKYWKSPDAPEAGAAC TGALEGEGRVG" misc_feature complement(148616..148684) /locus_tag="CMS_0126" /old_locus_tag="CMS0126" /note="1 probable transmembrane helix predicted for CMS0126 by TMHMM2.0 at aa 40-62" gene 148972..150336 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /db_xref="GeneID:6156119" CDS 148972..150336 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /codon_start=1 /transl_table=11 /product="putative cystathionine beta-synthase" /protein_id="YP_001708915.1" /db_xref="GI:170780583" /db_xref="GeneID:6156119" /translation="MKYADTILDLIGNTPLVKLNKVVEGISATVLVKVEYLNPGGSAK DRIATRIIDAAEREGKLKPGGTIVEPTSGNTGVGLALVAQQRGYRCVFVLPDKVGEDK RNVLTAYGAEIVVTPTSVAPDHSDSYYSVSDRLAREIPGAFKPDQYSNPNGPLSHYET TGPEIWRDTEGEITHFVAGVGTGGTISGVGRYLKEVSEGRVRIVGADPEGSVYSGGTG RPYLVEGVGEDFWPAAYDPDVVDEVIASSDQESFDMTLRLAREEGLLVGGSSGMAVVS ALKAAKHLGPDDVMVILLPDGGRGYLGKIFNERWMQSYGFARVNGQRTVADVMSAKTG SLPDLVHAHPNDTIRDAIRIMTEYDVSQLPVLSAEPPVVMGEVAGAVDERSLLELVFS GRAQLSDQVGPFTGDAFGLIGVNETVPDAWSALGSADALMVSDGGKPVGVLTRHDLLT YLTD" misc_feature 148990..149862 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /inference="protein motif:HMMPfam:PF00291" /note="HMMPfam hit to PF00291,Pyridoxal-5'-phosphate-dependent enzyme, beta subunit,score 5e-102" misc_feature 149068..149124 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /note="PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site." misc_feature 149968..150144 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 2.7e-08" misc_feature 150178..150330 /locus_tag="CMS_0127" /old_locus_tag="CMS0127" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 0.11" gene 150386..151558 /locus_tag="CMS_0128" /old_locus_tag="CMS0128" /db_xref="GeneID:6156120" CDS 150386..151558 /locus_tag="CMS_0128" /old_locus_tag="CMS0128" /note="catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine" /codon_start=1 /transl_table=11 /product="cystathionine gamma-synthase" /protein_id="YP_001708916.1" /db_xref="GI:170780584" /db_xref="GeneID:6156120" /translation="MSDKHDFDTRAIHAGQVPDPTTGAVIPPLYLTSTFVQDGIGGMR NGYEYARSANPTRTALQEQLASLEKGSHAFSFASGLAAEDTLLRAITRPGDRIVLSDD VYGGTYRLLTRVLGDWGIVVETVDMSDLAAVERVLGSGPAKVLWVETPSNPLMKISDI RALADLGHAAGATVVVDNTFASPYLQQPLTLGADVVVHSTTKYLGGHSDVLGGAVILD DDALAEKVGFLQFAIGAVSGPMDAWLTTRGIKTLAVRVERHSANAEEIAAFLQQHPDV TAVHYPGLPEHPGHDIAKAQMTGFGGMISFQVRGGAKAARRVVEGTRVFQLAESLGGV ESLISYPSEMTHASVKGTPLEVPDDLVRLSVGIESVEDLVVDLERALGKALKQGKH" misc_feature 150407..151531 /locus_tag="CMS_0128" /old_locus_tag="CMS0128" /inference="protein motif:HMMPfam:PF01053" /note="HMMPfam hit to PF01053, Cys/Met metabolism pyridoxal-phosphate-dependent enzymes, score 2.6e-200" misc_feature 150965..151009 /locus_tag="CMS_0128" /old_locus_tag="CMS0128" /note="PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site." gene complement(151599..152354) /gene="rnhA" /locus_tag="CMS_0129" /old_locus_tag="CMS0129" /db_xref="GeneID:6156121" CDS complement(151599..152354) /gene="rnhA" /locus_tag="CMS_0129" /old_locus_tag="CMS0129" /EC_number="3.1.26.4" /codon_start=1 /transl_table=11 /product="ribonuclease H" /protein_id="YP_001708917.1" /db_xref="GI:170780585" /db_xref="GeneID:6156121" /translation="MTITAAADGSALGNPGPAGWAWYVDDEHWAAGGWPHATNNQGEL KAVLELFRATAHLDDDLLVLCDSQYVINSVTKWMPGWKRKGWRKGDGKPVLNVELLQE IDAEIQGRRYRFEWVKGHANHPLNEAADDRARAVATAFQGRRPIPEGPGWAGHEADAS GSPDDATETAAVEADAERAADPQVAAAEELEAGAPAQPGLFDFDAFDEEIAPEPGDTT LTIALDRDTMARLSAHARERGVSVDEAVRELLP" misc_feature complement(151941..152285) /gene="rnhA" /locus_tag="CMS_0129" /old_locus_tag="CMS0129" /inference="protein motif:HMMPfam:PF00075" /note="HMMPfam hit to PF00075, RNase H, score 4.6e-17" gene 152529..153551 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /db_xref="GeneID:6158940" CDS 152529..153551 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001708918.1" /db_xref="GI:170780586" /db_xref="GeneID:6158940" /translation="MMTTETPRGRAPSIRDVARLAGVSHQTVSRVLNDSPSLRAETRQ RVLDVMEQVQYRPNRAARALVTSRSRTIGVLTAQSSQYGPASSIAAIEAAAREAGYLV TTTNLPSSDEAAIQVALGHLVDQAVEGLVVVAPQVRVREVIASMSLDVPYVTMQSDGR GDAHDLSVDQIAGARLATRHLLDLGHRDIYHLAGPQDWIEAEARMRGFLDAMSAAEVP TTAPILGDWTAEFGFYAGREMLRLRDFTAIFSSNDQMALGLIHAVRDAGLDVPRDVSI VGFDDIPEAAHFWPPLTTVRQDFAEVGCRCVALLLDGMGGTGDRYRGTITPELVVRAS SGPPSS" misc_feature 152562..152639 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 7e-11" misc_feature 152562..152627 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /note="Predicted helix-turn-helix motif with score 2227.000, SD 6.77 at aa 12-33, sequence PSIRDVARLAGVSHQTVSRVLN" misc_feature 152568..152624 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /note="PS00356 Bacterial regulatory proteins, lacI family signature." misc_feature 152733..153527 /locus_tag="CMS_0130" /old_locus_tag="CMS0130" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.00039" gene 153739..155427 /gene="araB" /locus_tag="CMS_0131" /old_locus_tag="CMS0131" /db_xref="GeneID:6156122" CDS 153739..155427 /gene="araB" /locus_tag="CMS_0131" /old_locus_tag="CMS0131" /EC_number="2.7.1.16" /note="catalyzes the phosphorylation of ribulose to ribulose 5-phosphate" /codon_start=1 /transl_table=11 /product="ribulokinase" /protein_id="YP_001708919.1" /db_xref="GI:170780587" /db_xref="GeneID:6156122" /translation="MSTAAEAQPSTEAESYVIGVDYGTLSGRAVVVRVSDGVELGSGV LDYPHAVMDDTLAATGAQLPPEWALQVPSDYVDVLKQAVPAAIREAGIDPARVIGIGT DFTACTMVPTLADGTPLNEVEGYADRPHAYVKLWKHHAAQSHADRINALAEERGEKWL ARYGGLISSEWEFAKGLQLLEEDPELYGLMDHWVEAADWIVWQLTGSYVRNACTAGYK GILQDGEYPTPEFLGALNPGFASFAEEKVAHEIGQLGSAAGTLSAEAAAWTGLPEGIA VAVGNVDAHVTAPVARAVEPGQMVAIMGTSTCHVMNSDVLTEVPGMCGVVDGGIVSGL YGYEAGQSGVGDIFAWYVKNQVPARYAEEAAAAGKSVHQHLTDLAADQPVGGHGLVAL DWHSGNRSVLVDHELSGLVVGTTLTTRTEEVYRALLEATAFGTRKIVETFGASGVPVT EFIVAGGLLKNAFLMQAYSDILRLPISVITSEQGPALGSAIHAAVAAGAYPDVRVAGD AMGKVERGKYQPDEERALAYDRLYEEYSTLHDYFGRGANDVMKRLKSLKREARA" misc_feature 153784..154608 /gene="araB" /locus_tag="CMS_0131" /old_locus_tag="CMS0131" /inference="protein motif:HMMPfam:PF00370" /note="HMMPfam hit to PF00370, Carbohydrate kinase, FGGY,score 7e-06" misc_feature 154615..155325 /gene="araB" /locus_tag="CMS_0131" /old_locus_tag="CMS0131" /inference="protein motif:HMMPfam:PF02782" /note="HMMPfam hit to PF02782, Carbohydrate kinase, FGGY,score 1.3e-09" gene 155424..156134 /locus_tag="CMS_0132" /old_locus_tag="CMS0132" /db_xref="GeneID:6158600" CDS 155424..156134 /locus_tag="CMS_0132" /old_locus_tag="CMS0132" /note="catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate" /codon_start=1 /transl_table=11 /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="YP_001708920.1" /db_xref="GI:170780588" /db_xref="GeneID:6158600" /translation="MSTYAPEIEVAVARVRSEVSRLHAELVRYGLVVWTGGNVSGRVP GADLFVIKPSGVSYDDLSPENMILCDLDGNVIPDTPGSRNAPSSDTAAHAYVYRNMPE VGGVVHTHSTYAVAWAARREPIPCVITAMADEFGGEIPVGPFAIIGDDSIGRGIVETL TGHRSRAVLMAGHGPFTIGKDAKDAVKAAVMVEDVARTVHISRQLGEPAPLPADAVDA LFDRYQNVYGQAPQGALK" misc_feature 155472..156071 /locus_tag="CMS_0132" /old_locus_tag="CMS0132" /inference="protein motif:HMMPfam:PF00596" /note="HMMPfam hit to PF00596, Class II aldolase/adducin,N-terminal, score 2.6e-70" misc_feature 155589..155627 /locus_tag="CMS_0132" /old_locus_tag="CMS0132" /note="PS00109 Tyrosine protein kinases specific active-site signature." gene 156131..157648 /gene="araA" /locus_tag="CMS_0133" /old_locus_tag="CMS0133" /db_xref="GeneID:6156123" CDS 156131..157648 /gene="araA" /locus_tag="CMS_0133" /old_locus_tag="CMS0133" /EC_number="5.3.1.4" /note="catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism" /codon_start=1 /transl_table=11 /product="L-arabinose isomerase" /protein_id="YP_001708921.1" /db_xref="GI:170780589" /db_xref="GeneID:6156123" /translation="MSRITTSLDHYEVWFLTGSQNLYGEETLQQVAEQSQEIARQLEE ASDIPVRVVWKPVLKDSDSIRRMALEANASDRTIGLIAWMHTFSPAKMWIQGLDALQK PFLHLHTQANVALPWSSIDMDFMNLNQAAHGDREFGYIQSRLGVVRKTVVGHVSTESV RDSIGTWMRAAAGWAAVHELKVARFGDNMRNVAVTEGDKTEAELKFGVSVNTWGVNDL VERVDAATDAEIDALVDEYERLYDIAPELQRGGERHESLRYGAAIEVGLRSFLEEGGF GAFTTSFEDLGGLRQLPGLAVQRLMAEGYGFGAEGDWKTAVLIRAAKVMGSGLPGGAS LMEDYTYHLVPGEEKILGAHMLEICPTLTTGRPSLEIHPLGIGGREDPVRLVFDTDPG PAVVVAMSDMRERFRIVANVVEVVPLDEPLPNLPVARAVWKPAPDLATSAAAWLTAGA AHHTVMSTQVGVEVFEDFAEIARTELLVIDEDTTLKGFTKEVRWNQAYHRLAQGL" misc_feature 156143..157639 /gene="araA" /locus_tag="CMS_0133" /old_locus_tag="CMS0133" /inference="protein motif:HMMPfam:PF02610" /note="HMMPfam hit to PF02610, L-arabinose isomerase,score 7.4e-253" gene 157723..158841 /locus_tag="CMS_0134" /old_locus_tag="CMS0134" /db_xref="GeneID:6158599" CDS 157723..158841 /locus_tag="CMS_0134" /old_locus_tag="CMS0134" /codon_start=1 /transl_table=11 /product="putative extracellular sugar-binding protein" /protein_id="YP_001708922.1" /db_xref="GI:170780590" /db_xref="GeneID:6158599" /translation="MKMKKVLVGIAATSIALSLAACSGGGGGSAGGTEDNKGALVGVA MPTKTSERWVDDGNNVNDQLTKLGYKVDLQYANDKVQDQISQIETMLNKGAKALIVAS IDGTALTQVLKTAADDGVKVIAYDRLINGTEDVDYYTTFDNQQVGVLQGNSLLQGLGL VDADGKATGSTEKKTIEVFAGSPDDNNATFFYDGAMSVLKPFLDSGQVTIGSGQSEFS QVAIQQWKQEGAQARMENLLSGSYPGGAKPDGVLSPYDGLSRGIIQALTSAGVASDAM PIITGQDGEKASDKLILDGVQYSTIFKDTRLLGKEAVTMVDDLLTGGTPDAPDTYNNK VKGVPTKQFAPVTVTKDNLVEVIVDSGYYTQDEIDKGE" sig_peptide 157723..157809 /locus_tag="CMS_0134" /old_locus_tag="CMS0134" /note="Signal peptide predicted for CMS0134 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.412 between residues 29 and 30" misc_feature 157834..158760 /locus_tag="CMS_0134" /old_locus_tag="CMS0134" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.00077" gene 159021..160550 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /db_xref="GeneID:6156124" CDS 159021..160550 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /codon_start=1 /transl_table=11 /product="putative sugar-transport ATP binding protein" /protein_id="YP_001708923.1" /db_xref="GI:170780591" /db_xref="GeneID:6156124" /translation="MANHILEMRGITKTFPGVKALQDVTLEVTRGTCHAICGENGAGK STLMKVLSGVYPAGSYDGDIVLENDVVKFSSIRDSEKSGVVIIHQELALSPFLSIAEN IFLGNEISKGGFIDWNSTNVEAAKLLARVGLSDNPATKIADIGVGKQQLVEIAKALSK EVKLLILDEPTAALNDEDSAHLLDLIKHLKGQGITSIIISHKLNEIKAIADAVTIIRD GKTIETLDLERDSISEERIIKGMVGRDLQSRYPDRTPDIGDEVLRIEDWTVHHPQEHS RVIVDHANLNVRAGEVVGIAGLMGAGRTELAMSVFGRSYGANISGKLYKRGKEIQAKT VGEAIKNGLAYATEDRKHYGLNLIDDIKRNISGAALEKLAKAGWVDANQEYVVADGYR KSMNIKAPSVGAITGKLSGGNQQKVVLSKWMFSDPDVLILDEPTRGIDVGAKYEIYTI INALAAQGKAIIVISSELPELLGICDRIYALSAGRITGQLPIAEATPESLMSYMTKEK E" misc_feature 159111..159677 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.4e-49" misc_feature 159132..159155 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 159888..160472 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 7.6e-17" misc_feature 160245..160289 /locus_tag="CMS_0135" /old_locus_tag="CMS0135" /note="PS00211 ABC transporters family signature." gene 160556..161743 /locus_tag="CMS_0136" /old_locus_tag="CMS0136" /db_xref="GeneID:6156125" CDS 160556..161743 /locus_tag="CMS_0136" /old_locus_tag="CMS0136" /codon_start=1 /transl_table=11 /product="putative sugar transport permease" /protein_id="YP_001708924.1" /db_xref="GI:170780592" /db_xref="GeneID:6156125" /translation="MSSLSSVAGFLVSRLRQIGIFIALIAIVVLFQILTDGTLLEPRN VTSIVVQNAYILILAIGMVMIIIAGHIDLSVGSVVALIGAVSGVFAVSWGWPWWASII ASLVIGGLIGAWQGFWVAYVGIPAFIVTLAGMLTFRGLAQIVLQNRPITPFPDEYVSV GAGFLPDPSGGNSYLEWVTVTLGVLAAIFLVAQQLRERRARVKLNLEDEPFAWFITKL ATIAILVLGITYLLASYQGTPIVLLILAVLVLVYTAVMNRSIFGRHIYARGGNLNAAQ LSGINTKRVDFLLFVNMGFLAALAGIAFTARSNSALPSAGNGFELDAIAAVFIGGAAV TGGIGTVTGAMIGGLIMGVLNNGMSLLGLGTEYQQLIKGLVLLLAVAFDVFNKSRGSK SAT" misc_feature order(160598..160657,160694..160762,160772..160840, 160859..160927,161072..161131,161192..161260, 161273..161341,161414..161473,161531..161599) /locus_tag="CMS_0136" /old_locus_tag="CMS0136" /note="9 probable transmembrane helices predicted for CMS0136 by TMHMM2.0 at aa 15-34, 47-69, 73-95, 102-124,173-192, 213-235, 240-262, 287-306 and 326-348" misc_feature 160685..161695 /locus_tag="CMS_0136" /old_locus_tag="CMS0136" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 1.1e-61" gene 161880..162566 /locus_tag="CMS_0137" /old_locus_tag="CMS0137" /db_xref="GeneID:6156126" CDS 161880..162566 /locus_tag="CMS_0137" /old_locus_tag="CMS0137" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="YP_001708925.1" /db_xref="GI:170780593" /db_xref="GeneID:6156126" /translation="MHVSDEVPSCSPSVSTLIPSGGTMSLPKSARNSAHRHRAAKWLT GLTAVIFVVAGASPASASSMSFHGGPSDASVVTQGLPNAAEHAVDDVQSARALAEFRA GNIVPRFEQENGARYEVYALPEGATFAFRVDAASGDPVSGSLIGGGYGDQGLFISLNS TDQGAIAAGAGYAVGAALCALPGVGQAACVVVGSVIAAATYYIGANGVCGGGRELRIY LQLLGYPECQ" sig_peptide 161880..162062 /locus_tag="CMS_0137" /old_locus_tag="CMS0137" /note="Signal peptide predicted for CMS0137 by SignalP 2.0 HMM (Signal peptide probability 0.617) with cleavage site probability 0.590 between residues 61 and 62" misc_feature 162339..162425 /locus_tag="CMS_0137" /old_locus_tag="CMS0137" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(162879..163166) /locus_tag="CMS_0138" /old_locus_tag="CMS0138" /db_xref="GeneID:6156127" CDS complement(162879..163166) /locus_tag="CMS_0138" /old_locus_tag="CMS0138" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708926.1" /db_xref="GI:170780594" /db_xref="GeneID:6156127" /translation="MSALFDGDNRASADTDLLREALLGEPQSRASLADLILDCHERTA RLKAKTYLSQKSTNRMSRIPKTVVADVSFGMTTLTKNATGRAMTTSRKTVA" gene 163552..164151 /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /db_xref="GeneID:6156128" CDS 163552..164151 /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001708927.1" /db_xref="GI:170780595" /db_xref="GeneID:6156128" /translation="MRRFVIPWAAVGVGVSVLAAVLAVQHGRDPVAAVVSALVVLSSG PIGLAIRHRRDGRSRAAASGSVERAIVACTQAAVFRDLLIAIPAAALLQLLRPGQPPI MTSLMLMVFALADYGFRYDARLRACLQPGPGTNDLGAYRVAARMAAEDLARATGVSDR TVVAIENGRHEPGVVLARAIAIELGVPVARLFPGSMSGA" sig_peptide 163552..163650 /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /note="Signal peptide predicted for CMS0139 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.638 between residues 33 and 34" misc_feature order(163564..163632,163642..163701) /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /note="2 probable transmembrane helices predicted for CMS0139 by TMHMM2.0 at aa 5-27 and 31-50" misc_feature 163960..164124 /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 1.5e-08" misc_feature 163987..164052 /locus_tag="CMS_0139" /old_locus_tag="CMS0139" /note="Predicted helix-turn-helix motif with score 1241.000, SD 3.41 at aa 146-167, sequence MAAEDLARATGVSDRTVVAIEN" gene complement(164242..165204) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /db_xref="GeneID:6156129" CDS complement(164242..165204) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /note="N/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708928.1" /db_xref="GI:170780596" /db_xref="GeneID:6156129" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(164254..164796) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(164881..164946) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(164946..165067) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(165067..165132) /locus_tag="CMS_0140" /old_locus_tag="CMS0140" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(165302..166495) /gene="xylA" /locus_tag="CMS_0141" /old_locus_tag="CMS0141" /db_xref="GeneID:6156130" CDS complement(165302..166495) /gene="xylA" /locus_tag="CMS_0141" /old_locus_tag="CMS0141" /EC_number="5.3.1.5" /note="catalyzes the interconversion of D-xylose to D-xylulose" /codon_start=1 /transl_table=11 /product="xylose isomerase" /protein_id="YP_001708929.1" /db_xref="GI:170780597" /db_xref="GeneID:6156130" /translation="MALTPTREDKFSFGLWTIGYTGADPFGGPTRSDLDVVEGVERIS ELGAYGLTFHDDDLFAFGSTDAERQTQIDRLKGALSDTGIVVPMVTTNLFSAPVFKDG GFTSNDRAVRRFAIRKVLRNIDLAAELGAKTFVMWGGREGAEYDSAKDVRGALERYRE AVNLLGDYVTDKGYDIRFAIEPKPNEPRGDILLPTLGHALAFIETLERPELVGVNPEV GHEQMAGLNFTAGIMQALYQGKLFHIDLNGQRGIKYDQDLVFGHGDLQNAFSLVDLLE NGGVGGGRSYDGPRHFDYKPSRTEDITGVWDSAAANMRMYLLLKERAQAFRADPEVQE ALAAAKVAEIDTPTLNEGESYDDILADRSSYEDFAADEYFDAKGFGFVRLNQLALEHL MGARS" misc_feature complement(165701..166378) /gene="xylA" /locus_tag="CMS_0141" /old_locus_tag="CMS0141" /inference="protein motif:HMMPfam:PF01261" /note="HMMPfam hit to PF01261, AP endonuclease, family 2,score 5.4e-37" misc_feature complement(165935..165958) /gene="xylA" /locus_tag="CMS_0141" /old_locus_tag="CMS0141" /note="PS00172 Xylose isomerase signature 1." gene 166703..168208 /locus_tag="CMS_0142" /old_locus_tag="CMS0142" /db_xref="GeneID:6159102" CDS 166703..168208 /locus_tag="CMS_0142" /old_locus_tag="CMS0142" /EC_number="3.2.1.21" /codon_start=1 /transl_table=11 /product="putative beta-glucosidase" /protein_id="YP_001708930.1" /db_xref="GI:170780598" /db_xref="GeneID:6159102" /translation="MTDASPAAAGSSGDPADDRGEGLEFPPGFLFGSATAAYQIEGAV DEGGRGPSIWDTFSRTPGKVLDGDTGDVADDHYHRLESDLDMMQALGLEAYRFSIAWP RIQPTGRGPANVEGLAFYGRLVDGLVARGITPIATLYHWDLPQALEDEGGWTNRDTAY AFADYARIMGEALGDRVGTWTTLNEPWCSAYLGYAAGVHAPGRTDAEASFQAVHHLNL AHGLAVSALQEVVPADARFSITLNLHVIRGEGDTGPEAVRRVDGVGNRVFLDPLLHGR YPADVMADTAGITDWSFVLPGDTELIRQPLHLLGVNYYNTSRVRMRDGAVAGGGTSIH GDVAATPFPGTDDVEFLEQPGPYTAMGWNIEPQGLEDLLVSLHEEFPDLPLMVTENGA AFDDEVSVDDAGTRAVHDPERIDYLSRHFAAAHRAMARGVDLRGYQVWSLMDNFEWAF GYSKRFGIVHVDYATQERTPKDSALWYARLIADRAIPAVDARPERHVRPGA" misc_feature 166766..168160 /locus_tag="CMS_0142" /old_locus_tag="CMS0142" /inference="protein motif:HMMPfam:PF00232" /note="HMMPfam hit to PF00232, Glycoside hydrolase, family 1, score 5.9e-195" misc_feature 166787..166831 /locus_tag="CMS_0142" /old_locus_tag="CMS0142" /note="PS00653 Glycosyl hydrolases family 1 N-terminal signature." gene 168205..168771 /locus_tag="CMS_0143" /old_locus_tag="CMS0143" /db_xref="GeneID:6156131" CDS 168205..168771 /locus_tag="CMS_0143" /old_locus_tag="CMS0143" /EC_number="2.3.1.128" /codon_start=1 /transl_table=11 /product="putative ribosomal-protein-alanine acetyltransferase" /protein_id="YP_001708931.1" /db_xref="GI:170780599" /db_xref="GeneID:6156131" /translation="MSGPPPGTDERAALADGVVMRPARITDAAALAEAYRANREHLRP FEPARTDAFFTSAGQRAQLAGRVAERATGSGLPYLIVEGDRVIGRCDLFAVKRGAAQS ASLGYWIDRERQGAGLATAAAREAVRIARAAGLHRLEASTLVGNGGSEEVLTRAGFAA IGVAPAYLRIDGEWRDHTLWQRVVDGAR" misc_feature 168436..168681 /locus_tag="CMS_0143" /old_locus_tag="CMS0143" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.3e-08" gene complement(168819..169256) /locus_tag="CMS_0144" /old_locus_tag="CMS0144" /db_xref="GeneID:6156132" CDS complement(168819..169256) /locus_tag="CMS_0144" /old_locus_tag="CMS0144" /codon_start=1 /transl_table=11 /product="putative MarR-familiy transcriptional regulator" /protein_id="YP_001708932.1" /db_xref="GI:170780600" /db_xref="GeneID:6156132" /translation="MTDHDGALLDRDMGLLLAAASRAVISLYRPLLKPYHLTHPQYLV MLALQEKDPRRAGDLSDAVQLTPGTLSPLFKRLELLGYITRQRDLADERRLLIALTER GRGILPDLLRVAERVHDDVVRRSGADPSAQARLRSMTELLLDA" misc_feature complement(168831..169148) /locus_tag="CMS_0144" /old_locus_tag="CMS0144" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 4.7e-16" misc_feature complement(169032..169097) /locus_tag="CMS_0144" /old_locus_tag="CMS0144" /note="Predicted helix-turn-helix motif with score 1321.000, SD 3.69 at aa 54-75, sequence RRAGDLSDAVQLTPGTLSPLFK" gene complement(169392..170348) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /db_xref="GeneID:6156133" CDS complement(169392..170348) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_001708933.1" /db_xref="GI:170780601" /db_xref="GeneID:6156133" /translation="MTDAPSTARDLDSAALAAVHALAVRGSITAAAAALGVSQPALSQ TLRRLEARIGVPVTARAGRGVVLTEAGRVLARHAETVVHAIDAAADELDDLRGLRAGT VRVAAFPSASSTVVPRLLGGLAAAHPGLGFGYLEAEPPEAVAAVRAREADVAVTFAYP DDPDDHAARSLDDLDARPLWRETLWAVLPEARALRHRGPLALRDLADDRWIAGCVRCR RHLVSACARSGFAPATSFETDNAAAAVGMVQAGLGVALLPSLALASAPLPRGVVRRRI SGVGERVVHVVTAPGGSASPAAHAAVQALARLRVGDWELRRA" misc_feature complement(169422..170063) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 5.1e-38" misc_feature complement(170133..170312) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 1.2e-16" misc_feature complement(170178..170270) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /note="PS00044 Bacterial regulatory proteins, lysR family signature." misc_feature complement(170208..170273) /locus_tag="CMS_0145" /old_locus_tag="CMS0145" /note="Predicted helix-turn-helix motif with score 1929.000, SD 5.76 at aa 26-47, sequence GSITAAAAALGVSQPALSQTLR" gene 170430..171521 /locus_tag="CMS_0146" /old_locus_tag="CMS0146" /db_xref="GeneID:6156134" CDS 170430..171521 /locus_tag="CMS_0146" /old_locus_tag="CMS0146" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708934.1" /db_xref="GI:170780602" /db_xref="GeneID:6156134" /translation="MPTRNPTPAPADAAPAPLPADLRDLFEAGPGYLSACTMGLPTRA TVERLRADLTTWSAGGSTAHGYGGVVEGVRASYASLVGVPVGSVAVGSQTASFVSVLA AAVPAGAEVLCVSGDFSSLTYPFVVAEARGVVVRHVPLEELAGEIGPRTHLVAFSLVQ SADGRVADVAAIREAARIHDAFTLCDTTQAAGAMPIDASLFDATACHAYKWLCAPRGA AFLTLSDRYRRTLVPVQANWYAGADVWASCYGPAMALAEDARAFDVSPAFGAWVGAAP AIALFARLDLHAVHRRNVELGDLVSAGLGIEPRGQAIVTWPDADGADLARLGAAGIVA SGRAGRARIAFHLWNDEDDVERVVRALRA" gene 171607..172920 /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /db_xref="GeneID:6156135" CDS 171607..172920 /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /codon_start=1 /transl_table=11 /product="putative membrane transport protein" /protein_id="YP_001708935.1" /db_xref="GI:170780603" /db_xref="GeneID:6156135" /translation="MDIEARHPRALSPPAPRAPLISKERSVSSAVLHPGDALSRRERI VYIIVLGALVGLGPFTIDLYLPAFPVIKEQFGVSDAAVQLTLTGTTVGFALGQLVVGP WSDRVGRRLPLIVATSLHILASLGAALAPDVTVLLVFRILQGAGAAGGAVVAMAMVRD LFGGRPLVRMLSRLALVTGLAPILAPVIGSQLLRFVDWRGVFYALTAYAILVVIAVTF FIVETLPKDRVRIEEKGTLLRRYRSVLGDRVFVGVALIGGMQFAGLFSYLSSSSFLFQ DVYGFDAQQFGILFGINSLGVVIGNQIAARLTKVIGPQWILAGVVTVQFLSSATIVLL GTFTDAGLLGTLIPLFFFILACGFGFPCVQVLGLVNHGHEAGTAASLLGAVNFGLAGA ISPIVGLIGITSGVPMAVVMGACAVVSILSMWLIVQPRTVPALTN" misc_feature 171736..172911 /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 4.8e-05" misc_feature order(171739..171807,171850..171918,171937..171996, 172012..172080,172117..172185,172198..172266, 172351..172419,172462..172530,172549..172617, 172645..172713,172747..172815,172828..172887) /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /note="12 probable transmembrane helices predicted for CMS0147 by TMHMM2.0 at aa 45-67, 82-104, 111-130, 136-158,171-193, 198-220, 249-271, 286-308, 315-337, 347-369,381-403 and 408-427" misc_feature 171754..172815 /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 171904..171957 /locus_tag="CMS_0147" /old_locus_tag="CMS0147" /note="PS00216 Sugar transport proteins signature 1." gene 173030..174040 /locus_tag="CMS_0148" /old_locus_tag="CMS0148" /db_xref="GeneID:6156136" CDS 173030..174040 /locus_tag="CMS_0148" /old_locus_tag="CMS0148" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708936.1" /db_xref="GI:170780604" /db_xref="GeneID:6156136" /translation="MMAAHVAVPRTLELDEPSTWLAIADGRSSILFATLAGLSIALMS GRERPLDGSDLARVRLRILVRAACLFLLGGLLAALQTYVAVILEVYAVLFVAVLPLLR WRASRLLALAAVAAVALPVATTALAIHFDGALMRPDPFVVLVVTGHYPALTWVVFAIA GLGIGRLALGSARVQLLLMTVGAGLAVLAYGGSALVEAAVPAPPPGWEFILSTTPHEG SPFEVVGSGGFAIAVIGLCLRVAALLPAVLVPLEAVGQLALTVYAVHIVVIDLVAPEG DLIADDGAYLAFLLVTVVLSLLWTRTIGRGPLERALGAVAGWASDLAPRGSRERAPEG VR" misc_feature order(173087..173155,173213..173266,173279..173332, 173351..173419,173477..173536,173555..173623, 173681..173749,173768..173836,173879..173938) /locus_tag="CMS_0148" /old_locus_tag="CMS0148" /note="9 probable transmembrane helices predicted for CMS0148 by TMHMM2.0 at aa 20-42, 62-79, 84-101, 108-130,150-169, 176-198, 218-240, 247-269 and 284-303" gene complement(174037..174942) /locus_tag="CMS_0149" /old_locus_tag="CMS0149" /db_xref="GeneID:6156137" CDS complement(174037..174942) /locus_tag="CMS_0149" /old_locus_tag="CMS0149" /codon_start=1 /transl_table=11 /product="putative aminoglycoside phosphotransferase" /protein_id="YP_001708937.1" /db_xref="GI:170780605" /db_xref="GeneID:6156137" /translation="MIDADADAALVDLAMLGPLLERWRLDPDGPAVRTPSSVLAPVRR DGARLMLKVPLVEEERRGGRLMAAWAGRGAAPVLASDADGTVVMARADDTGILVREAS AEGPDADARDDRATRILARAATRLHGVPLDPRTCAEAVPLAVWFRELVEPARPLPRSL DRGAAVARELLAGSGPTAVLHGDVHHGNVLRFGGGGHDDDDAWRAIDPKALVGDPGFD TANILANPTPGIALRPGRLARRARVVAEETGIDRDAVLAWAEAGCALSAAWDAADAAR LPRLEALARLGAAARDARPGSGRPL" misc_feature complement(174121..174879) /locus_tag="CMS_0149" /old_locus_tag="CMS0149" /inference="protein motif:HMMPfam:PF04655" /note="HMMPfam hit to PF04655, Aminoglycoside/hydroxyurea antibiotic resistance kinase, score 2.7e-44" gene complement(174939..175589) /locus_tag="CMS_0150" /old_locus_tag="CMS0150" /db_xref="GeneID:6156138" CDS complement(174939..175589) /locus_tag="CMS_0150" /old_locus_tag="CMS0150" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708938.1" /db_xref="GI:170780606" /db_xref="GeneID:6156138" /translation="MQDDGDAPRDGASTIIRPRAALLRQLALATLALVVPLGAALLVL AIPTGNAAAVILGVAVVGLLSALLAALYRTSYVRISHTTGDVESRFLLRRTRVRRSSV HDLLVAHVYQGLTLDTQPRLFVMDVDGRLLLRLSGHVYDLWTMRSMAGDLDLPLTEQA KVLTMAELRGARRGVLPWYERSRLALAGALVLLGMGVIGAVVGIMALTGVPVSIRL" sig_peptide complement(174939..175091) /locus_tag="CMS_0150" /old_locus_tag="CMS0150" /note="Signal peptide predicted for CMS0150 by SignalP 2.0 HMM (Signal peptide probability 0.716) with cleavage site probability 0.576 between residues 51 and 52" misc_feature complement(order(174960..175028,175374..175433, 175461..175529)) /locus_tag="CMS_0150" /old_locus_tag="CMS0150" /note="3 probable transmembrane helices predicted for CMS0150 by TMHMM2.0 at aa 21-43, 53-72 and 188-210" gene complement(175793..175877) /locus_tag="CMS_r044" /old_locus_tag="CMSr044" /db_xref="GeneID:6156139" tRNA complement(175793..175877) /locus_tag="CMS_r044" /old_locus_tag="CMSr044" /product="tRNA-Ser" /note="codon recognized: UCC; tRNA Ser anticodon GGA, Cove score 54.44" /anticodon=(pos:175841..175843,aa:Ser) /db_xref="GeneID:6156139" gene complement(175923..178709) /locus_tag="CMS_0151" /old_locus_tag="CMS0151" /db_xref="GeneID:6159062" CDS complement(175923..178709) /locus_tag="CMS_0151" /old_locus_tag="CMS0151" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_001708939.1" /db_xref="GI:170780607" /db_xref="GeneID:6159062" /translation="MKQMTHTHIRSGSRVESPAPGRGGRARDLETLERWLAAGTSAVV TGSVGSGRSHVAGRVADALTRNGLTVIRAHASTPDLPDVLRRVIDQVPGIRAARPLPA VRPVVVIDDGHLMAPDVRAALVDARASERCTLLVTVDDTGGDARHLRAREPEPGTEQA VRAAQAAHEILGLWRNGYAERLDLSPLDAAEVDAMIDSIAGQVALDQATRVQIQRRSG GRPFLVRELTFEALESDGTERTVTGYAFPSPHAPRARILELVSSRVSMLDDDERSTLV LLARLDGVPYQRAARLFGETILRVLGARGLARVQGQGDRILRADLLEAEAALARTDPE AVDALTRRVVGSLLQEASHGVPLSPKESLLIARTLTVDGRRDAVERFGADTLAAVHLV AARLANDVGMTHDALAFAEIASDGGSVAYAACEQARALTVLGNPARAMETMDALDTAA LMPGERVEALRWCVLATQAALPGTDHVRRLLDGIGHGAEAHSDACAEAAAIGAAMALG QMEWETALTTARDAGARASSPLVRLRAQRSVVLALGHLGRGAELGEAIDDGLGLVSRR PDRRGTYDDILLEEARLEMLSASAFSRRLCRLDIPDLERELDAWVESAIAQDAQWFIP VLGAITGGVALDLGRLDRAEAELSLADDRLIGPDTGTWRLWIGMQRARVLALRGCTEE AERIATDIAHRADPRYPYQRMLAEGVRVEILASRGRPEEAATLLLDVGDLSGEAHALR AGMLFRAWTLGSTDPRLVEGARLVRERTDVPALHGMAEVVEGSRTSDAALVAQGVRTL EESGLHQQALAACEDLLRMLAGDAAGPALTDARATLARIQTRIDRGAPATAAASVTPV LDVSMLTRRELEIGVLAAQGLSNREIAGRLFLSVRTVESHLYQARAKLGAPSRRALAG LLDTPGASGLVAGR" misc_feature complement(175962..176135) /locus_tag="CMS_0151" /old_locus_tag="CMS0151" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2.6e-16" misc_feature complement(176016..176081) /locus_tag="CMS_0151" /old_locus_tag="CMS0151" /note="Predicted helix-turn-helix motif with score 1028.000, SD 2.69 at aa 976-997, sequence LSNREIAGRLFLSVRTVESHLY" gene complement(179108..179770) /locus_tag="CMS_0152" /old_locus_tag="CMS0152" /db_xref="GeneID:6156140" CDS complement(179108..179770) /locus_tag="CMS_0152" /old_locus_tag="CMS0152" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708940.1" /db_xref="GI:170780608" /db_xref="GeneID:6156140" /translation="MDAMRIIIAGGHGQIARLLERRLADQGHQPVGIVRNPDHASDLA DAGAEALVLDLEQSDVDQVAEALQGADAVVFAAGGGPDSGPERKLTIDRDGAILLADA AEKAGVTRYVMISAMAVDGFDPDSDDTYEIYQRAKSEADADLRARDIDWTIVRPGGLT DDPGTGRIHVGTSTGRGTIPRADVAEIVATALVDGTGVRVQFEAISGEEPVAEAIAGL RY" gene 179995..182112 /locus_tag="CMS_0153" /old_locus_tag="CMS0153" /db_xref="GeneID:6156141" CDS 179995..182112 /locus_tag="CMS_0153" /old_locus_tag="CMS0153" /note="catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /protein_id="YP_001708941.1" /db_xref="GI:170780609" /db_xref="GeneID:6156141" /translation="MARSIYITSAEGHSGKSTVALGVLDTLTHQIQRVGVFRPIARSI VERDYVLEALLSHDGVDLDYDECVGVTYDDVHADPEAALSRIVERYKAVEAKCDAVVI VGSDYTDVGSPTELSFNARIAANLGAPVLLVLTGRRTDETGGRSPDEMRQIADLAIPE LVTAHAGLLGVVVNRADPEQLDAITAAIPAAVPASLQAQAPHVPVWAIPEDAFLVAPT VAELLDAVDGTLVKGDAALLSREALGVVVSAMSMENVLARLTEGAIVVIPGDRSEVLL GVLTAHASETFPTVAGIVLNGGFALSPTIERLVSGLDETLPIISTELGTYETAKRITQ TRGRLSPESSRKMDTALAAFEQHVDTSRLLELLDVSRSDVVTPLMFEYGLIERARKAG KRIVLPEGTDDRVLRAAGTILSRGIADVTILGEEIEVRSRAIGLGIDIGRATVLSPFD AVLRERFAEEYVRLRAHKGMVLDIARETVTDVSYFGTMMVQLGLADGMVSGAAHTTAH TIRPGFEIIKTTDGVSVVSSVFLMALADRVLVYGDCAVNPDPTADQLADIAISSAGTA AQFGIEPRIAMLSYSTGESGAGADVEKVRQATARVRELRPDLAVEGPIQYDAAADAAV AATKMPGSEVAGRATVFIFPDLNTGNNTYKAVQRSAGAVAIGPVLQGLRKPINDLSRG ALVQDIVNTVAITAIQAEGIEAG" misc_feature 180022..180045 /locus_tag="CMS_0153" /old_locus_tag="CMS0153" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 180655..180999 /locus_tag="CMS_0153" /old_locus_tag="CMS0153" /inference="protein motif:HMMPfam:PF07085" /note="HMMPfam hit to PF07085, DRTGG, score 2.4e-30" misc_feature 181129..182082 /locus_tag="CMS_0153" /old_locus_tag="CMS0153" /inference="protein motif:HMMPfam:PF01515" /note="HMMPfam hit to PF01515, Phosphate acetyl/butaryl transferase, score 6.3e-177" gene 182167..183357 /locus_tag="CMS_0154" /old_locus_tag="CMS0154" /db_xref="GeneID:6156142" CDS 182167..183357 /locus_tag="CMS_0154" /old_locus_tag="CMS0154" /note="AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA" /codon_start=1 /transl_table=11 /product="acetate kinase" /protein_id="YP_001708942.1" /db_xref="GI:170780610" /db_xref="GeneID:6156142" /translation="MPVVLVVNSGSSSFKYQLIEMDTETVLASGLVERIGEEVGSTRH KAGGDSWERELPIADHTAGFQAMLDAFADHGPSLEEGPPVAIGHRVVHGGDVFVEPTV VTEKVKADIDDLSALAPLHNPGALQGIQAAQTAFPDVAHVAVFDTAFHQTLPAEAYTY AIDRELAAAHRIRRYGFHGTSHKYVSEAAARLLGKPLEETRIIVLHLGNGASAAAVQG GRSIDTSMGLTPLEGLVMGTRSGDIDPAILFHLARHTDLGLDDLETLLNRKSGLLGLT GLGDMRDVQRAAADGDEDAQTALGVYRHRIRHYVGAYAAQLGGVDAVVFTAGVGENNP LVRRRSLAGLEFMGIGIDDDRNELISSEARFVSPDGSPVAVLVIPTDEELEIARQSLA ATGN" misc_feature 182173..183330 /locus_tag="CMS_0154" /old_locus_tag="CMS0154" /inference="protein motif:HMMPfam:PF00871" /note="HMMPfam hit to PF00871, Acetate and butyrate kinase, score 7.6e-190" misc_feature 182176..182211 /locus_tag="CMS_0154" /old_locus_tag="CMS0154" /note="PS01075 Acetate and butyrate kinases family signature 1." gene 183661..187968 /locus_tag="CMS_0155" /old_locus_tag="CMS0155" /db_xref="GeneID:6156143" CDS 183661..187968 /locus_tag="CMS_0155" /old_locus_tag="CMS0155" /codon_start=1 /transl_table=11 /product="putative sortase sorted surface protein" /protein_id="YP_001708943.1" /db_xref="GI:170780611" /db_xref="GeneID:6156143" /translation="MPSRRSRLATATAFGLAAAIVAFGGTAPANAAPGDTAEAEGRFL TLTNVPQVIALDGAYTSYGPGDTAAQVENAPLDVDVLNGLANAQLAAGVTLGSLLDLD QAAGAGVLQQYASSGPAGATGAAGAVSDTGAIQVGQGAGQQTVIDLGSTIESIGAEGA LSDLSLRFGAISSTTTSTGTGTPTSDYDIASAEAVLTSPLVAQISSRLTAAVNGIAPE IAADIDVSAATGPLLEGILGENVLTAALEVGTPTVTATANVNTAAVVQAALAEPLTNA DGTVSIDVSAGSITVDLDRIQALNDRDPGASILTSAILADVVDSAITNIFTDVLPNRL VTALRASTTVDIAVTAPLTVGLLNTDAGDLVVNVDVSLDRLLGGTTGTAPTVSLDGTN LIGIPVSLAVLTPLFDDLVTGLLGSNADTDLLPAIGDALAGVSTGVITALAPALAVVD QVVRLTVNEQTPDAFIDGDGVDAGSSSVTALRVRLLGNGGPTIDLARSTVRAVPAPVA DDVTITSPTPDQVIELADGQTTVVVPVTGTADPDAEVTLTVGGQTVGPVEVGPGGTYT LTPTALPAGNYTATVTQTIDGQAAGSATVTFTIAAAATDITITTPTADQVFLTTAADP TVDVPVEGAADVRASVTVTIPGQTAQTELVGADGLYDVAFADLPVGTYTATATQTIDG VVRGTATVTFTVGAPAAAVTITSPSTGDQILSAGTVPTADVPVTGAADPRATVTVTIP GQDPQTELVGDDGVYDVTFADLPVGDYTATATQTIGGTAAGSATVTFSVIAPAVAVVI DTPTDGQDFVVPAGGTAVPVTVSGSADVRGSVLIAVTGQTPVTQVVGDDGRFEATFPG LSAAEYTVTVTQTIGGAAAGSDTADFTISVAGVDQVVILTPEDGDFVPLPDGDTTVSV PVTGTADPDATVTLTVGDTTTAPAEVDDDGGFSLATPDLPSGTYTGTVTQTIDGVAVG TDTVTFTIGVPVVIVSPFDFQVFPLTGGATTRDVPVSGTADPLGTITVSTLGLDPITT EVDADGNWTVTFFGLERGTYDVTATQTIGGAPAGEDTVTFDVGVDGGEGTDSDADGSA AAVDVDGGGVDAAGTDATDSADAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGT DATDAAGTDAAGTDATDAAGADATDAAGADAADAAGTDATDAAGDNDADTDAAGADAT DAAGADAADADGDNDADTDAAGADATDAAGADATDAAGTDATDAAGADATDAAGTDAT DAAGTDAADATDGSTDGSDAPTRAVVRFTEIVRGSGSMQMVDASGFIPGETLNATVFS TPKPLAPMIADADGRATFVFEIGPDFEMGDHRVEVSGVQSGMADEMDTRFRVLGSTVP AGQPGTPISGGNGGGYGGGILPVTGGDADGMLLLGGIALLMMLTGAGALHRGRSRRA" sig_peptide 183661..183753 /locus_tag="CMS_0155" /old_locus_tag="CMS0155" /note="Signal peptide predicted for CMS0155 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.871 between residues 31 and 32" misc_feature order(183679..183747,187882..187941) /locus_tag="CMS_0155" /old_locus_tag="CMS0155" /note="2 probable transmembrane helices predicted for CMS0155 by TMHMM2.0 at aa 7-29 and 1408-1427" gene 188188..189084 /locus_tag="CMS_0156" /old_locus_tag="CMS0156" /db_xref="GeneID:6156144" CDS 188188..189084 /locus_tag="CMS_0156" /old_locus_tag="CMS0156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708944.1" /db_xref="GI:170780612" /db_xref="GeneID:6156144" /translation="MTDTTHDHDVEHDATEDVAVDASESTDHDPAGVADEGASPVDPA DPTPPALTRAARIGTAIAALVVVIYVATSILMVVPQSDATRALTAAARPYFGQQWNVF APSIQKTNRYLEMQAQWRDDSGALVKSEWVDITRAEYEAGEGRIQSSRTVKQSANLLK TYTERFRGLTREQQAIVQDTFIRRADTDSGFAAKTAVSLIDQLQALDEGSRGRVITML RADYVLKEFTTYWATAWFGRDIERVRWRVATERPNDFAHRSDEQQQFTPSTRTFGWRE ADDVIDPQALSVYQGIVERYAR" misc_feature 188356..188424 /locus_tag="CMS_0156" /old_locus_tag="CMS0156" /note="1 probable transmembrane helix predicted for CMS0156 by TMHMM2.0 at aa 57-79" gene 189081..190301 /locus_tag="CMS_0157" /old_locus_tag="CMS0157" /db_xref="GeneID:6156145" CDS 189081..190301 /locus_tag="CMS_0157" /old_locus_tag="CMS0157" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708945.1" /db_xref="GI:170780613" /db_xref="GeneID:6156145" /translation="MSARTHETTSTPKAAAAGSWAGRPRTARAVPSARAARVRRLLQD RELLTALRDPRGWPRGIATWMTEREHATFSFAALRITLGAVILMVLVTCFADRHYLWG VGSRFIDPEASRRGWLPIFTGLFSKTDATLFDLSYLLLVVLAALFTLGWRTRIVTPFL LLFWIGLSTNSTLLTNGGDTVLRLTLFFVLFADLSRHLSLDAVRRRREREAAEAGIVR RRPPQHVEAARTLVDRIPRLVRVLLHNTALVLCAYQIMLVYVNSAILKLQGPEWRDGS ATYYSLVIEGYRPWPWLSDLLTQASVGVVLASFLAVAFQGLFPLLILWRPTRIVALVV ITGMHVMIGILLGLWPFSLAMIALDFLFIRDATWREGLALARRARAEAPGRLRELRER RSSPAAPAEVPAES" misc_feature order(189297..189365,189471..189530,189543..189611, 189621..189680,189792..189860,189984..190052, 190065..190133) /locus_tag="CMS_0157" /old_locus_tag="CMS0157" /note="7 probable transmembrane helices predicted for CMS0157 by TMHMM2.0 at aa 73-95, 131-150, 155-177,181-200, 238-260, 302-324 and 329-351" gene 190326..192839 /locus_tag="CMS_0158" /old_locus_tag="CMS0158" /db_xref="GeneID:6156146" CDS 190326..192839 /locus_tag="CMS_0158" /old_locus_tag="CMS0158" /note="catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunits gamma and tau" /protein_id="YP_001708946.1" /db_xref="GI:170780614" /db_xref="GeneID:6156146" /translation="MPGILRTVVTALYRRYRPENFAELIGQTQVTDPLRTALRTNRVN HAYLFSGPRGCGKTTSARILARCLNCAEGPTDTPCGVCPSCVELSRDGSGSLDVVEID AASHNGVDDARDIRERAVFAPARDRYKIFILDEAHMVTPQGFNALLKIVEEPPEHVKF IFATTEPDKVIGTIRSRTHHYPFRLVPPAQMLDYVEHLSREESVQVAPGVLPLVVRAG GGSVRDTLSLLDQLIAGSEDESVEYERAVALLGYTHAALLDEVIDAIARHDAAAAFAG VDRVIQTGQDPRRFVEDLLERLRDLIIVGATSVEGAAAVLRGTPEDELERMRAQAVAF GAVELSRAADVVNAALTEMTGATSPRLHLELLVARVLVPASDDTHRGALARVERLERR VGVADAGADPAPATPVAAAAPAAAPAPASAPAPAATSAPVAAPDPAPTPDPAPAAKST ETGATTQTPAASAPDESSPSSSGTGAPAAEAPSAPAPTAPVGPVTFEQLRDSWPSVVE AVEKAKRSAWLVAVTATPRALTDDVLTLSFVSANDAERFKERGAPGQGVSDILRTAIL DVLGIRVKFIARVEPHGGSAAPTGTSAPTGGGSASPAPDASRPAASAPSSAPTRPKGG NAATTSAPATPPASSASTAKTAPAAGTAPAAGSASPAKTTPAGGGWATVAIPTSDPGA SEAPAVRAPASRPERSANAGPATAPTASAAAPRASTPSAPARGSSVVPDAHVPDFEEP EPDEFGPAEPGWATGGASPDSAPPVARSAPAQQPPAASGPASRPDTAPAAPAKAAPPA AAPQRYGESVVREILQASFIEEKPIERKARPTIRPTGQD" misc_feature 190461..191039 /locus_tag="CMS_0158" /old_locus_tag="CMS0158" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 1.1e-06" misc_feature 190476..190499 /locus_tag="CMS_0158" /old_locus_tag="CMS0158" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 192846..193445 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /db_xref="GeneID:6156147" CDS 192846..193445 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /note="involved in a recombinational process of DNA repair, independent of the recBC complex" /codon_start=1 /transl_table=11 /product="recombination protein RecR" /protein_id="YP_001708947.1" /db_xref="GI:170780615" /db_xref="GeneID:6156147" /translation="MYEGIVQELIDELGRLPGIGPKSAQRIAFHILQTETFDVSRLAE VLTVVRDKVRFCAICGNVSEEETCGICRDPRRSPATICVVEEAKDVVAIERTREFRGL YHVLGGAISPIDGIGPDDLRIRQLMQRLADATVTEVIIATDPNLEGEATATYLSRLLS TFDIRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLVGE" misc_feature 192846..192935 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /inference="protein motif:HMMPfam:PF00633" /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 0.0099" misc_feature 192954..193079 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /inference="protein motif:HMMPfam:PF02132" /note="HMMPfam hit to PF02132, RecR protein, score 5e-14" misc_feature 193011..193073 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /note="PS01300 RecR protein signature." misc_feature 193080..193361 /gene="recR" /locus_tag="CMS_0159" /old_locus_tag="CMS0159" /inference="protein motif:HMMPfam:PF01751" /note="HMMPfam hit to PF01751, TOPRIM, score 4.2e-17" gene 193558..194823 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /db_xref="GeneID:6158926" CDS 193558..194823 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /note="catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation." /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="YP_001708948.1" /db_xref="GI:170780616" /db_xref="GeneID:6158926" /translation="MSLIVQKFGGSSVADAESIKRVAKRIVATRKAGNDVVVAVSAMG DSTDELLDLAHEVTPIPAPRELDMLLTAGERISMALLAMAIKSMGYDARSFTGSQAGM ITDAQHGAARIVDVTPGRVRDALGEGAIAIVAGFQGFNRGTGDITTLGRGGSDTTAVA LAAALGADVCEIYTDVDGIFTADPRVVPLARKIDRITSEEMLELAASGAKVLYIRAVE YARRHGVLLHVRSSFTHNEGTIVYNPTDGENVEEPVIVGVAADLSEAKVTVVGVPDVP GKAAQIFTIVAKTGANIDMIVQNVSAAATSLTDISFTLPKSDAQRVLTVLAAEKDEVG FTGLQHDDQIGKLALVGAGMRTNAGVSAQLFTALSDAGINIEMISTSEIRISVVTRAD TIDEAVRVVHHAFGLDADDVAVVHAGTGR" misc_feature 193561..194250 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /inference="protein motif:HMMPfam:PF00696" /note="HMMPfam hit to PF00696,Aspartate/glutamate/uridylate kinase, score 1e-76" misc_feature 193570..193596 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /note="PS00324 Aspartokinase signature." misc_feature 194353..194580 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1.6e-09" misc_feature 194599..194793 /locus_tag="CMS_0160" /old_locus_tag="CMS0160" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1.1e-08" gene 194885..195979 /locus_tag="CMS_0161" /old_locus_tag="CMS0161" /db_xref="GeneID:6156148" CDS 194885..195979 /locus_tag="CMS_0161" /old_locus_tag="CMS0161" /note="catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="YP_001708949.1" /db_xref="GI:170780617" /db_xref="GeneID:6156148" /translation="MTETAPAGSAATTPETPGLRVGVVGATGQVGAVMRRLLEERAFP IAEIRFFASARSAGTTLPFAGRDVVVEDAATADPTGLDIALFSAGATTSRAQAPRFAE AGVLVIDNSSAWRMDPDVPLVVSEVNPEAIADARRGIIANPNCTTMAAMPVLKVLHEE AGLTRLVVSTYQAVSGSGLVGAEELAGQTEAAVAAGPEALRRLVHDGRAVELAEPAVY QRPIAFDVIPLAGSIVDDGLFETDEEKKLRNESRKILGLPDLLVSGTCVRVPVFTGHS LSVNAEFASPLSVARALELLSTAPGVELSDIPTPLQAAGTDPSYVGRIRADEGAPEGR GLAFFISNDNLRKGAALNAVQIAEVVAARR" misc_feature 194936..195307 /locus_tag="CMS_0161" /old_locus_tag="CMS0161" /inference="protein motif:HMMPfam:PF01118" /note="HMMPfam hit to PF01118, Semialdehyde dehydrogenase,score 9.2e-56" misc_feature 195344..195925 /locus_tag="CMS_0161" /old_locus_tag="CMS0161" /inference="protein motif:HMMPfam:PF02774" /note="HMMPfam hit to PF02774, Semialdehyde dehydrogenase,score 7.1e-66" misc_feature 195668..195712 /locus_tag="CMS_0161" /old_locus_tag="CMS0161" /note="PS01103 Aspartate-semialdehyde dehydrogenase signature." gene 196067..197545 /locus_tag="CMS_0162" /old_locus_tag="CMS0162" /db_xref="GeneID:6156149" CDS 196067..197545 /locus_tag="CMS_0162" /old_locus_tag="CMS0162" /EC_number="1.1.5.4" /note="malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate" /codon_start=1 /transl_table=11 /product="malate:quinone oxidoreductase" /protein_id="YP_001708950.1" /db_xref="GI:170780618" /db_xref="GeneID:6156149" /translation="MSDTAESVDVVLVGGGIMSATLGTLIKQLEPDWTIQIFERLGEV AMESSNPWNNAGTGHAALCELNYTPEKDGKIEIGSATRINEQFQLSRQFWAHLVTAGA VPEPKEFINPTPHMTFVRGKENAEYLRRRFDALRAHPLFDAMEYTEDPAVIHSWAPLL VLQRDKDEVIAATRFEGGTDVDFGALTNKLVDYLMEHGAALHLNHEVRGLSKNADGTW HLRVRNDVGRSTVEVDAKFVFIGAGGGALPLLQKSGIPEIKGFGGFPISGEWFRTDDP EIVAKHRAKVYGKAAIGSPPMSVPHLDTRVVGGETSLLFGPYAGFSPRFLKKGSLLDL FASIRPHNIIPMLAVAKDNMSLIKYLVSQLLASKETKFDALREFMPTADPKDWYQVTA GQRVQVMKKDAEKGGVLQFGTEVVAAADGSIAGLLGASPGASTAVPIMLDVLERCFPD CIAGWKKPLTRMIPNYGTLVASDPKKTPKIIRETAEVLELQH" misc_feature 196076..197536 /locus_tag="CMS_0162" /old_locus_tag="CMS0162" /inference="protein motif:HMMPfam:PF06039" /note="HMMPfam hit to PF06039,Malate:quinone-oxidoreductase, score 0" gene 197598..198806 /locus_tag="CMS_0164" /old_locus_tag="CMS0164" /pseudo /db_xref="GeneID:6156150" gene 198956..199585 /locus_tag="CMS_0165" /old_locus_tag="CMS0165" /db_xref="GeneID:6156151" CDS 198956..199585 /locus_tag="CMS_0165" /old_locus_tag="CMS0165" /codon_start=1 /transl_table=11 /product="putatuve two-component response regulator" /protein_id="YP_001708951.1" /db_xref="GI:170780619" /db_xref="GeneID:6156151" /translation="MLMGHESALDEVCAILRRQAPEIAVVVGTTGWLQLVRSPRFPTD VVVVDYDLADAVSLEGRIRSCRAAGAAVVVLSRSGTEEVRRRVVDAGAAALLTGPVPA ADIVAAVRAVAAGARSAQQRADETNRAEDGHAARAFADPRLSQGEEQALRLYVTGRST LAVATAMNVQYETAKTYLRRVRAKYRLVGRIAGRRADLIDRATEDGYLR" misc_feature 198968..199306 /locus_tag="CMS_0165" /old_locus_tag="CMS0165" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 0.00059" gene 199586..200260 /locus_tag="CMS_0166" /old_locus_tag="CMS0166" /db_xref="GeneID:6156152" CDS 199586..200260 /locus_tag="CMS_0166" /old_locus_tag="CMS0166" /note="catalyzes the formation of thymidine 5'-phosphate from thymidine" /codon_start=1 /transl_table=11 /product="thymidine kinase" /protein_id="YP_001708952.1" /db_xref="GI:170780620" /db_xref="GeneID:6156152" /translation="MAKLYYRFGAMNSGKSTSMLQAAYNYEERGQHVLLTKPVIDTKG DRDIVSRLGVRRPVDFLLEPDADVWQEFGIHRERVLQDKGGPTACLLVDEAQFLRESQ VDDLLRIAILQDVPVIAYGIRTDFQTVAFPGSRRLLEIAHSLEEMKTICRCGRKAVFN ARQVGERFIFAGDQVAIDGEDVTYMSLCGACYLAESGGVLTSGRPVEASASAFGYPAG PDADFA" misc_feature 199616..200161 /locus_tag="CMS_0166" /old_locus_tag="CMS0166" /inference="protein motif:HMMPfam:PF00265" /note="HMMPfam hit to PF00265, Thymidine kinase, score 2.9e-25" gene 200637..202031 /locus_tag="CMS_0167" /old_locus_tag="CMS0167" /db_xref="GeneID:6156153" CDS 200637..202031 /locus_tag="CMS_0167" /old_locus_tag="CMS0167" /codon_start=1 /transl_table=11 /product="putative Wzz-related membrane protein" /protein_id="YP_001708953.1" /db_xref="GI:170780621" /db_xref="GeneID:6156153" /translation="MELREYIRILRRSWVLILLVLLLGVGAAAGYSLVQTPEYRASSK VFVSTQSAGTVQDLSQGNTFTQQAVKSYADVVATPAVLEPVIAQLGLDATAESLAPKI TATAAADTVIIQISVEDEQAESAATIANAVARSFTDFVAELTPLDVNGQPQVKITTLQ EARIPASPVSPQVPLNLALGGLIGLALGVAAAVLRATLDTRIRGERDLRLVTHVPILG GIAFDPKAKERPLIVQSDPRSPRAESFRSLRTNLQFLDFGGRARSFVITSAVESEGKS TTSANLAIALSDAGARVAVIDADLRRPKLASYLGLEGAVGLTDVLIGRAELKDVLQPW GNRNMFVLPAGQIPPNPSELLGSRTMVALLKELEADFDTVLIDAPPLLPVTDSAVLSK SAGGAILIVSSGRAHRGQVHAAIESLNSVGAEVLGVVLTMLPTKGPDAYGYGQYGYSY VRPESADTTSPAAS" misc_feature 200637..201041 /locus_tag="CMS_0167" /old_locus_tag="CMS0167" /inference="protein motif:HMMPfam:PF02706" /note="HMMPfam hit to PF02706, Lipopolysaccharide biosynthesis, score 5.4e-23" misc_feature 200676..200744 /locus_tag="CMS_0167" /old_locus_tag="CMS0167" /note="1 probable transmembrane helix predicted for CMS0167 by TMHMM2.0 at aa 62-84" misc_feature 201441..201464 /locus_tag="CMS_0167" /old_locus_tag="CMS0167" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 202394..203344 /locus_tag="CMS_0168" /old_locus_tag="CMS0168" /db_xref="GeneID:6156154" CDS 202394..203344 /locus_tag="CMS_0168" /old_locus_tag="CMS0168" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001708954.1" /db_xref="GI:170780622" /db_xref="GeneID:6156154" /translation="MAVTGRARRRRPSLGRLIPGVGVTAAVAFLVIDLILVSAAVTRT GGGSGGEGTAAPAPSASSTDAAATPTPAPSATASTTVAEPTVFLAAGNAEVAWRTTSG SCTGEPARIQTTIDEGRTWDTRSTGSFDARRILALQVESPDVGSVVADVTAACTRTTL QSFTGGEFWRDAPALTATTAYVDPATPGTVQLVQGPRDAPCDDAVQVVDSGQAAAVLC GSGALHVRSGSGDFRLIDAPGVLALALGTDGILTAGTAGSCAGTSVGRIVPASGAVSV LGCATAVPTSGSVALSAAGRDVWLLTGDSVSISSDGGATW" sig_peptide 202394..202510 /locus_tag="CMS_0168" /old_locus_tag="CMS0168" /note="Signal peptide predicted for CMS0168 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.418 between residues 39 and 40" misc_feature 202430..202498 /locus_tag="CMS_0168" /old_locus_tag="CMS0168" /note="1 probable transmembrane helix predicted for CMS0168 by TMHMM2.0 at aa 13-35" gene 203341..205161 /locus_tag="CMS_0169" /old_locus_tag="CMS0169" /db_xref="GeneID:6156155" CDS 203341..205161 /locus_tag="CMS_0169" /old_locus_tag="CMS0169" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001708955.1" /db_xref="GI:170780623" /db_xref="GeneID:6156155" /translation="MTSTAGVAPSPRRRRARRPWTRRRILTVAGAAIAVILVIWIVWI AARALLARGELEQAVPLASSVQRDLLAGDTAGASSGVTQLREHSSRAVSLTGDPVWAV TEHVPFVGPNLRAFREISSVVDRIGGDALQPVVGIAGTLDVSSLTPKDGRLDLAPIVA AQEPVRQADDALDAALGDVKAIDTGSTIRPVADAVARLEETVGKAAETLAVVRHVTDL APAMLGADGDRSYLLMFQNNAEVRSTGGIPGALALVRTGGGGFSLAGQDSARAFPRLA EPALPLDPQTAGLYGTITGRYMQDVTLTPEFPQAAPLAAEMWRLKHGEAVDGVISIDP VALSYLLEATGPITLATGDVLRSDDAVDLLLHDVYLRYPNPDIQDAVFASVADSVFAK VSSGDVDPAALVKALGHAAEERRILIWNSRADEQATLDGTTFQGSLPTDNDESTVFGV FLNDSTGAKMDYFLSLRTTLGMAMCRDDGRPDYRTEVILGSTAPADAASLPFVVTGGG VYGVAPGDVKTRVAVYGPPGTVPLRVRIDGQETQFQPEIVGGRAVAQVEVTLKPGQEV RISVDTLGDKRTDTPLSIVTTPVIDTIATEFRSLPCEASR" sig_peptide 203341..203490 /locus_tag="CMS_0169" /old_locus_tag="CMS0169" /note="Signal peptide predicted for CMS0169 by SignalP 2.0 HMM (Signal peptide probability 0.988) with cleavage site probability 0.335 between residues 50 and 51" misc_feature 203410..203478 /locus_tag="CMS_0169" /old_locus_tag="CMS0169" /note="1 probable transmembrane helix predicted for CMS0169 by TMHMM2.0 at aa 24-46" gene 205178..205834 /locus_tag="CMS_0170" /old_locus_tag="CMS0170" /db_xref="GeneID:6156156" CDS 205178..205834 /locus_tag="CMS_0170" /old_locus_tag="CMS0170" /codon_start=1 /transl_table=11 /product="putative sortase sorted surface protein" /protein_id="YP_001708956.1" /db_xref="GI:170780624" /db_xref="GeneID:6156156" /translation="MIDGGPESASGPCAPRKAHIWGNHLFKKIIAGAAIALAATFSVA TAANADPYTPEGGVTVSDPTVAPGQSTTLTFADGSFAPVVPVTITISGEDAANATLAS FRTAPMAVTRSSITKNSTSAGGLRVTVTLPAGTATGSYAIAGTDTLGNTVSTTISVVA AAGNGTATGGSTADGAAGLPVTGGQLPVVLIWTGGGLLLLGAALVAVFATVRRQRATA" sig_peptide 205178..205324 /locus_tag="CMS_0170" /old_locus_tag="CMS0170" /note="Signal peptide predicted for CMS0170 by SignalP 2.0 HMM (Signal peptide probability 0.902) with cleavage site probability 0.890 between residues 49 and 50" misc_feature 205742..205810 /locus_tag="CMS_0170" /old_locus_tag="CMS0170" /note="1 probable transmembrane helix predicted for CMS0170 by TMHMM2.0 at aa 189-211" gene 206154..206696 /locus_tag="CMS_0171" /old_locus_tag="CMS0171" /db_xref="GeneID:6156157" CDS 206154..206696 /locus_tag="CMS_0171" /old_locus_tag="CMS0171" /codon_start=1 /transl_table=11 /product="putative sortase sorted surface protein" /protein_id="YP_001708957.1" /db_xref="GI:170780625" /db_xref="GeneID:6156157" /translation="MLAKTLAGAFVALAITVSVPLAAQAENYVPKDSALACGGMSVTP AAVAPGGSVTITGAAGSFTAGETVAVRLAATAGASAAAGDPSASVTAAADGSVTGTLV VPTAATGTWRANETAASGDHWCGLVSVVPASAGTAAASGTLPITGGTLPTGLAITGGG LLLAGAAAAGIATARRRRAS" sig_peptide 206154..206228 /locus_tag="CMS_0171" /old_locus_tag="CMS0171" /note="Signal peptide predicted for CMS0171 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.963 between residues 25 and 26" misc_feature 206607..206675 /locus_tag="CMS_0171" /old_locus_tag="CMS0171" /note="1 probable transmembrane helix predicted for CMS0171 by TMHMM2.0 at aa 152-174" gene complement(206736..207212) /locus_tag="CMS_0172" /old_locus_tag="CMS0172" /db_xref="GeneID:6156158" CDS complement(206736..207212) /locus_tag="CMS_0172" /old_locus_tag="CMS0172" /note="May confer antibiotic resistance" /codon_start=1 /transl_table=11 /product="putative VanZ-like membrane protein" /protein_id="YP_001708958.1" /db_xref="GI:170780626" /db_xref="GeneID:6156158" /translation="MPGRSTWGARRDRERRRIRRRQAAVLLVAYVALIGLVTLTPDSV DRGVYPHLMRGVVFVQHHGILWFRYSMIEEVANVALFAPLGMLGVLASGAPRWWIVVL AGTALSASVELAQGAFLPARVASVTDVAANGAGALVGATTAALVAARTRRRGRIRS" sig_peptide complement(206736..206873) /locus_tag="CMS_0172" /old_locus_tag="CMS0172" /note="Signal peptide predicted for CMS0172 by SignalP 2.0 HMM (Signal peptide probability 0.988) with cleavage site probability 0.838 between residues 46 and 47" misc_feature complement(206754..207137) /locus_tag="CMS_0172" /old_locus_tag="CMS0172" /inference="protein motif:HMMPfam:PF04892" /note="HMMPfam hit to PF04892, VanZ like protein, score 0.00076" misc_feature complement(order(206769..206828,206856..206924, 206937..206990,207093..207146)) /locus_tag="CMS_0172" /old_locus_tag="CMS0172" /note="4 probable transmembrane helices predicted for CMS0172 by TMHMM2.0 at aa 23-40, 75-92, 97-119 and 129-148" gene 207332..208363 /locus_tag="CMS_0173" /old_locus_tag="CMS0173" /db_xref="GeneID:6156159" CDS 207332..208363 /locus_tag="CMS_0173" /old_locus_tag="CMS0173" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001708959.1" /db_xref="GI:170780627" /db_xref="GeneID:6156159" /translation="MTHLERVPLDVLDLAPRPFGGTNADAVAGSIRLAQAAETAGYSR FWVAEHHGMPGIASSAPAVLLAGIAGRTSTIRVGSGGVMLPNHTPLVVAEQFGTLRAL YGDRVDLGIGRAPGTDGATALALRRPEAGLGADDFPQQLLDLIGFFRGGMADDNPLRG ITAVPGLGDVPQMWLLGSSGYSAQVAAALGIRFAFAHHFAGDRTEQALATYRARFQPS EDLAAPHSAIAVSVIADEDPDVVEREARAGRITWLRMRQGGKPQPVDPAEAAAYEFSD LEREIIGARDRRQAIGSPDAVRIGLERLLTSTGADELIVAPSSTTLDHRIQTLRTVRD LAIGEARAA" misc_feature 207362..208354 /locus_tag="CMS_0173" /old_locus_tag="CMS0173" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 5.5e-14" gene 208489..210690 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /db_xref="GeneID:6156160" CDS 208489..210690 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /codon_start=1 /transl_table=11 /product="putative penicillin-binding protein/transpeptidase" /protein_id="YP_001708960.1" /db_xref="GI:170780628" /db_xref="GeneID:6156160" /translation="MGAFLGLVGMSTIAGVLVAAMVTPAIAVSGIAANSTIGVFEDIP DNLQIDNLAQKTVLYAKQGDNQVPFAEFFSQDREEVPWDAVSSFAKDAAIATEDPRYY EHGGVDVLSAARALAQNVLNKEVQSGASTITMQYVRNVLVQKAQNMVDSSDEATQAEG RKAFTEATQPDMPRKLKEMRMAIGVEKKYSKNEILLAYLNIANFGSRVYGIESAARYY FNVSAADLTLEQAASLIATVNAPEVFKIDNPDNLERNKERRDLLLRNMLKEQKITQEQ YDTASAAAITPTITPSTSGCIQANPISAAYFCDYVKNEILTNPEFGATPAERDAVLKR GGMQVYTTLDLDIQGNAAEQMRKQVPTTARFTKIGGSVVSREVKTGRIIAMAQNTDYG VAADQPGVTEINYSADKAHGGSAGFQVGSTYKIFTLVDWLKSGKSIYQTVNASKTTWS ASEFTRCGDNLAGSPDYKVTNDTNTGATSNQNVLAATVASVNSAFVAMASQLDLCDIS KTATEMGAYNADKRDLSSFPSDVVGSGGNTVAPLQMATAFSSVANQGNMCPPIAIDKV VLPDESELVTPKSECAQAMSPEVANTAAFTLKAVMGGTGAASNPRDGTEIMGKTGTTD RSKDTWFVGSSTEVTTAVWVGNVEGFASMRRNVLNGSAADSARHRIFKPLQTFIDDRY PAEGFPAPSSTLTKKPYVPPAPKPSQSAAPTAPEAPAAPAAPAEPAPPAEG" sig_peptide 208489..208584 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /note="Signal peptide predicted for CMS0174 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.385 between residues 32 and 33" misc_feature 208501..208569 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /note="1 probable transmembrane helix predicted for CMS0174 by TMHMM2.0 at aa 5-27" misc_feature 208654..209235 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /inference="protein motif:HMMPfam:PF00912" /note="HMMPfam hit to PF00912, Glycosyl transferase,family 51, score 3.2e-60" misc_feature 209596..210516 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /inference="protein motif:HMMPfam:PF00905" /note="HMMPfam hit to PF00905, Penicillin-binding protein,transpeptidase, score 9.7e-07" misc_feature 210325..210348 /locus_tag="CMS_0174" /old_locus_tag="CMS0174" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 210845..212080 /locus_tag="CMS_0175" /old_locus_tag="CMS0175" /db_xref="GeneID:6156161" CDS 210845..212080 /locus_tag="CMS_0175" /old_locus_tag="CMS0175" /codon_start=1 /transl_table=11 /product="putative acyltransferase" /protein_id="YP_001708961.1" /db_xref="GI:170780629" /db_xref="GeneID:6156161" /translation="MTGTPTSAPARVRTLLPGIEGLRGIAAVAVLLYHVQRQLARPTT DIPLVGEVAFFSHGVTLFFVLSGFLLFLPFARGLVDGVPMPRLSRYALNRALRVFPGY IVVLLLVSLVLRVAILPRETRDAGILVGTLGPLDTVLNALLLQGYAPRTLRSGIEVAW TLAVEVSFYVLLPIVALLAARLLRGRATWIRALTPAAVLLLIGVAGKVWSMIAQAPLG HRGRLASEWGVTWEAVANRSILVHADLFAYGMAAAMILLTLSADAGLRDRVAAWRVPA GIVAAALIVVASEAPVGAFEESIVAFSCATLLLLVALPRRGGSLGPVTRFLELRWIAW LGTISFSVYLWHLPVIRFLRRAGLVLPDTLAGFALNTLVVGAVTLVLSAATYYAIERP ALRLKDVDRRSRADARRRP" misc_feature order(210872..210940,211001..211069,211127..211195, 211220..211288,211316..211384,211403..211471, 211556..211624,211649..211708,211718..211786, 211823..211891,211934..212002) /locus_tag="CMS_0175" /old_locus_tag="CMS0175" /note="11 probable transmembrane helices predicted for CMS0175 by TMHMM2.0 at aa 10-32, 53-75, 95-117, 126-148,158-180, 187-209, 238-260, 269-288, 292-314, 327-349 and 364-386" misc_feature 210890..212032 /locus_tag="CMS_0175" /old_locus_tag="CMS0175" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 1.2e-22" gene 212151..212576 /locus_tag="CMS_0176" /old_locus_tag="CMS0176" /db_xref="GeneID:6156162" CDS 212151..212576 /locus_tag="CMS_0176" /old_locus_tag="CMS0176" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708962.1" /db_xref="GI:170780630" /db_xref="GeneID:6156162" /translation="MRRTGLALTSAGAWWCIGVALSFHEIIFISLASSPTEDERDATV IVVVPLGIAVIAAFSVSVLCFRHFGIVRSAWAFPVLVVAGALVAAAQFPLSAGPYGYW LSELPRPVLLVLWSGPALPAAVILVLLHVVLRVRERHVG" sig_peptide 212151..212243 /locus_tag="CMS_0176" /old_locus_tag="CMS0176" /note="Signal peptide predicted for CMS0176 by SignalP 2.0 HMM (Signal peptide probability 0.961) with cleavage site probability 0.279 between residues 31 and 32" misc_feature order(212169..212237,212280..212348,212367..212435, 212478..212546) /locus_tag="CMS_0176" /old_locus_tag="CMS0176" /note="4 probable transmembrane helices predicted for CMS0176 by TMHMM2.0 at aa 7-29, 44-66, 73-95 and 110-132" gene complement(212685..212758) /locus_tag="CMS_r046" /old_locus_tag="CMSr046" /db_xref="GeneID:6156163" tRNA complement(212685..212758) /locus_tag="CMS_r046" /old_locus_tag="CMSr046" /product="tRNA-Pro" /note="codon recognized: CCG; tRNA Pro anticodon CGG, Cove score 67.59" /anticodon=(pos:212722..212724,aa:Pro) /db_xref="GeneID:6156163" gene complement(212822..213766) /locus_tag="CMS_0177" /old_locus_tag="CMS0177" /db_xref="GeneID:6159058" CDS complement(212822..213766) /locus_tag="CMS_0177" /old_locus_tag="CMS0177" /codon_start=1 /transl_table=11 /product="putative secreted phosphoesterase protein" /protein_id="YP_001708963.1" /db_xref="GI:170780631" /db_xref="GeneID:6159058" /translation="MGVVGTIARTVGGVAAAGAAVFAYASFYERRRFTLREVTVPVLP VGADPIRVLHLSDMHMAPWQHKKQRWVRELAELKPDLVVDTGDNTGHEQGIVAVEETL EAFRGIPGVFVHGSNDYYGPMMKNPFKYFTANTHATQRPADLDLARLERLYASLGWVD LNNAAGAIEVNGTLLEFFGVNDPHRDFDHLEALPGALDALREDGDAYQGASDAPVVSM GVAHAPYRRVLDSFVTNGARMIFAGHTHGGQVCVPGYGALVTNCDIPRRQVKGLSVWP HAERAAFLHVSAGLGASIYAPVRFACYPEATLLTLTAV" sig_peptide complement(212822..212890) /locus_tag="CMS_0177" /old_locus_tag="CMS0177" /note="Signal peptide predicted for CMS0177 by SignalP 2.0 HMM (Signal peptide probability 0.656) with cleavage site probability 0.381 between residues 23 and 24" misc_feature complement(213023..213619) /locus_tag="CMS_0177" /old_locus_tag="CMS0177" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 1.5e-14" misc_feature complement(213686..213754) /locus_tag="CMS_0177" /old_locus_tag="CMS0177" /note="1 probable transmembrane helix predicted for CMS0177 by TMHMM2.0 at aa 5-27" gene complement(213766..216306) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /db_xref="GeneID:6156164" CDS complement(213766..216306) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /codon_start=1 /transl_table=11 /product="putative penicillin-binding protein/transpeptidase" /protein_id="YP_001708964.1" /db_xref="GI:170780632" /db_xref="GeneID:6156164" /translation="MSASKNTPGRVAAALTGVLGMSAVAGVLVAAMVTPAIAVTSLAA NNTIGLFEDLPDYLQIDNLAQKTELYATQGGQPVKFAEFYAQNRQEVSWDEVSDNAKA AAVDTEDPRFYEHGGVDVQSTFRALAQNVIGGGVESGASTITMQYVKNVLVQKAETLA ETDPDAGKKAYAEATQESTARKLKEMRLAIGLEKKFAKNDILLGYLNIANYGGSVYGI QSAAKYYYNVDAKDLSIAQAASLVATVNYPTALRIDEPGNVKANQERRDILIDNMLKH HSITQQQHDEAIATPVTPAITPSVSGCNAAQPASAAYFCDAVKYTVENSKEFGASPDE ARRNLNRNGYKIYTTLNLDLQAKATDDMRKQIPTTMNSIPELGSAMTSVEAKTGRVIA MVQNTDYGNNAGAGVQSVNFNTDQDMGGSRGFQVGSTYKLVTLLEWLKEGHSVNEVVN SSKGTWSGSDFRDSCTGGTLSSKPLVVTNDGAAPGANRTVMSGTANSTNTAFMAMASE LDMCGIVQTAKDIGIHQADKSKPLSGLVSDIIGSGGNNIAPLTMASAYATVANNGTTC TPILIDKVVLPDDTEVTPPSANCTETVSPDVAHTAAYALAGVMGATGAAANTNDGTPL IGKTGTTDRAKDTWFVGSSSEVTTAIWVGSYGGQDIRQRTTNLPNGQLMSTARFAVWK PFMQSVNAVYKGSAFPGPAADLTRTPTVQVPDVSGMSPADAQSAIEGAGLSFAQGGAR ASSVSAGQVAGSDPGAGANAARGSTVTVFISSGPGQSLQQGTPGTVPDVRGQDMTSAR QTLRAAGFDVTMAQEQVQDNSQIGKATRTDPAAGQQSGGPVTLYIGRS" misc_feature complement(213772..213963) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 1.7e-10" misc_feature complement(213991..214185) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 8.1e-11" misc_feature complement(214285..215175) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /inference="protein motif:HMMPfam:PF00905" /note="HMMPfam hit to PF00905, Penicillin-binding protein,transpeptidase, score 6.5e-07" misc_feature complement(214423..214446) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(214990..215037) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /note="PS00146 Beta-lactamase class-A active site." misc_feature complement(215545..216108) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /inference="protein motif:HMMPfam:PF00912" /note="HMMPfam hit to PF00912, Glycosyl transferase,family 51, score 5.7e-55" misc_feature complement(216208..216276) /locus_tag="CMS_0178" /old_locus_tag="CMS0178" /note="1 probable transmembrane helix predicted for CMS0178 by TMHMM2.0 at aa 104-126" gene 216412..216594 /locus_tag="CMS_0179" /old_locus_tag="CMS0179" /db_xref="GeneID:6156165" CDS 216412..216594 /locus_tag="CMS_0179" /old_locus_tag="CMS0179" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708965.1" /db_xref="GI:170780633" /db_xref="GeneID:6156165" /translation="MTATPAQWEYLTTPLMIHNTAAILNTWGSQGWELVQVVTGPEGG LVAYMKRPVAGAEHGA" gene 216594..217058 /locus_tag="CMS_0180" /old_locus_tag="CMS0180" /db_xref="GeneID:6156166" CDS 216594..217058 /locus_tag="CMS_0180" /old_locus_tag="CMS0180" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708966.1" /db_xref="GI:170780634" /db_xref="GeneID:6156166" /translation="MGAISERLAELGIELPAVAAPVAAYVPAVVHGGLVYTSGQLPFV DGALAATGKVGAEVSAEDAKAHARTCALNGLAAAAAAAGGIDRIARVIKVTGFVASAE GFTGQPGVINGASEVLGEILGRAGIHARSAVGVAELPLGSPVEVELVVALVE" misc_feature 216642..217049 /locus_tag="CMS_0180" /old_locus_tag="CMS0180" /inference="protein motif:HMMPfam:PF01042" /note="HMMPfam hit to PF01042, Endoribonuclease L-PSP,score 5.2e-21" gene complement(217143..219173) /locus_tag="CMS_0181" /old_locus_tag="CMS0181" /db_xref="GeneID:6156167" CDS complement(217143..219173) /locus_tag="CMS_0181" /old_locus_tag="CMS0181" /codon_start=1 /transl_table=11 /product="acetyl-coenzyme A synthetase" /protein_id="YP_001708967.1" /db_xref="GI:170780635" /db_xref="GeneID:6156167" /translation="MTMSTNPRSTEHGAPRPAAREQDEEGTTAPPPSPDPGPVHPPSE AFCATRVADESLAASAAADRLGFWADRARELVTWETPFETVLDWSDAPVARWFPEGRL NVAYNCLDRHVLAGHGDRVALHWEGEPGDTRDLTYAELTAEVKRAANALRDLGVVAGD RVAIYLPMIPEAVIAMLAVARIGAVHSVVFGGFSAESLRARIDDAAARIVITADGGWR KGKVFPLKSAVDAALVGSAGSVEHVLVVRRGENEVEWDDARDLWWHERVAAADPEHVA EAFEAEHPLFILYTSGTTGKPKGILHTSGGYLTQVAYTHRNVFDLHPETDVYWCTADV GWITGHSYVVYGPLANGATQVIYEGTPDSPAPGRWWDIVERHGVTILYAAPTAIRSFM KTGREIPDARDLSSIRLLGSVGEPINPEAWRWYRDVIGGGDVPVVDTWWQTETGGIMI SALPGVTATKPGSAQSPIPGIQVAVVDDQGEPVARGESGLLVVTEPWPGMLRGIWGDP ERYRETYWDRFGDRYFAGDGARLDEDGDIWLLGRVDDVMNVSGHRLSTAEIESSLVAH PYVAEAAVVGASDEATGQAVVAFVILRSAEASALGDEDPNEVLRKHVSDQIGAIAKPR RVFVVQELPKTRSGKIMRRLLRDVAEGRAIGDTTTLADTQVMQVISDRMSAG" misc_feature complement(217452..218768) /locus_tag="CMS_0181" /old_locus_tag="CMS0181" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 6e-136" misc_feature complement(218280..218315) /locus_tag="CMS_0181" /old_locus_tag="CMS0181" /note="PS00455 Putative AMP-binding domain signature." gene 219514..220782 /locus_tag="CMS_0182" /old_locus_tag="CMS0182" /db_xref="GeneID:6156168" CDS 219514..220782 /locus_tag="CMS_0182" /old_locus_tag="CMS0182" /codon_start=1 /transl_table=11 /product="putative secretory protein" /protein_id="YP_001708968.1" /db_xref="GI:170780636" /db_xref="GeneID:6156168" /translation="MVEWQASVVGRGVLPGEASRHRSAGGAGPGASARPLVAAAAFVP RARTPGGTVPGADPSIVGGSDAGVALRLPGGDRAAEAASTPPSRRVPSALGPLAPLAR DPRTTDVFVNGDGEVWVDRGSGPERRPDVDLGGEPSVRALAVRLAAEGGRHLDEAAPC VDVRLGDGMRIHAVLPPVSTRGTLLSIRLPSRARPTLDALDAAGAFPPGCRALLEEAV RRRTNLLITGAGGSGKTTLLGALLARADPRERIVIVEDVAELRVRHAHVVSLEARQAN IEGAGELSLPRLVREALRMRPDRLVVGECRGSEIRELLGALNTGHDGGAGTLHANGVA DVPARLEALGALAGMDAVTTARQAVSAIGLVIHLARTTQGRRVTAAGRLVTGVDGRLR VMPVRWDPATVPVARAAVAASATDAHGSRA" misc_feature 219754..220629 /locus_tag="CMS_0182" /old_locus_tag="CMS0182" /inference="protein motif:HMMPfam:PF00437" /note="HMMPfam hit to PF00437, Bacterial type II secretion system protein E, score 1.2e-65" misc_feature 220195..220218 /locus_tag="CMS_0182" /old_locus_tag="CMS0182" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 220779..221780 /locus_tag="CMS_0183" /old_locus_tag="CMS0183" /db_xref="GeneID:6156169" CDS 220779..221780 /locus_tag="CMS_0183" /old_locus_tag="CMS0183" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708969.1" /db_xref="GI:170780637" /db_xref="GeneID:6156169" /translation="MIRRAHALRSRLRGAGDEAVVEETEEIATFVRRLAVLLGAGLHL ERAWSQLAPPGGRARRGERAVPALVRRVASGAGSAPLAERVVAAATAVEPAGGATAGS WCALAAGLEVADRTGAPLARSLDRLAVSLVDIARVRRDAGTALAGPVATSRTVLLMPG AGLLLAAGLGFDPLRVLVTTLPGLACLGVGSSLVAIGWRWNRDLVRRATPHEPAPGLV LDLVAMAMSGGASVPRAVAVVRRACERAGLGEADDLDAVGPVVDAAARTGAPVAVLLA SEAERIRRDAATWAERAAARLAARLMLPLGVCVLPAFLAVGVVPMLLAVVSSTLGRG" misc_feature order(221223..221291,221304..221372,221685..221753) /locus_tag="CMS_0183" /old_locus_tag="CMS0183" /note="3 probable transmembrane helices predicted for CMS0183 by TMHMM2.0 at aa 149-171, 176-198 and 303-325" gene 221777..222343 /locus_tag="CMS_0184" /old_locus_tag="CMS0184" /db_xref="GeneID:6156170" CDS 221777..222343 /locus_tag="CMS_0184" /old_locus_tag="CMS0184" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708970.1" /db_xref="GI:170780638" /db_xref="GeneID:6156170" /translation="MTASTVAGPDAGRARRTGHGGVPVDGRRGQDGGHRPSEGEDEDM GRIEERTHAIDARGADAEAARGPASGMTGAAMAPEGRAVWPLAAARTAPTRSSGRATS CAGICGGEVVTASPGLVPSRSARVVRAARRALLCRAPGDAGAATAEYAIATMAAVAFA GLLVVILQSDEVRGMLLDLVRRALTYDR" misc_feature 222209..222277 /locus_tag="CMS_0184" /old_locus_tag="CMS0184" /note="1 probable transmembrane helix predicted for CMS0184 by TMHMM2.0 at aa 145-167" gene 222340..222741 /locus_tag="CMS_0185" /old_locus_tag="CMS0185" /db_xref="GeneID:6156171" CDS 222340..222741 /locus_tag="CMS_0185" /old_locus_tag="CMS0185" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708971.1" /db_xref="GI:170780639" /db_xref="GeneID:6156171" /translation="MIALTSAEGHPHRDPHPHPVADRGAAAAELAVVLPAVVLVLGLC LGAVQTVGQQVVLTSAAEEAARSIGRGEDAGTAAARIEGAAAGASMAVDRTGHAVCVR LTAPSRFAPAGAAGLRVQAKGCAWQEDPGAP" misc_feature 222415..222483 /locus_tag="CMS_0185" /old_locus_tag="CMS0185" /note="1 probable transmembrane helix predicted for CMS0185 by TMHMM2.0 at aa 26-48" gene 222731..223087 /locus_tag="CMS_0186" /old_locus_tag="CMS0186" /db_xref="GeneID:6156172" CDS 222731..223087 /locus_tag="CMS_0186" /old_locus_tag="CMS0186" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708972.1" /db_xref="GI:170780640" /db_xref="GeneID:6156172" /translation="MPRDGDTGSGTALAVGVLGAVTALALATVAVSSVLVERAAAAGA ADSGALAAADVAAGFAVGSPCAAAEEVVVAAGAALTGCEVSGTTAVVEAERGGPLGIQ VTARARAGQPPARAPG" sig_peptide 222731..222853 /locus_tag="CMS_0186" /old_locus_tag="CMS0186" /note="Signal peptide predicted for CMS0186 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.383 between residues 41 and 42" misc_feature 222758..222826 /locus_tag="CMS_0186" /old_locus_tag="CMS0186" /note="1 probable transmembrane helix predicted for CMS0186 by TMHMM2.0 at aa 10-32" gene 223301..226339 /locus_tag="CMS_0187" /old_locus_tag="CMS0187" /db_xref="GeneID:6156173" CDS 223301..226339 /locus_tag="CMS_0187" /old_locus_tag="CMS0187" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /protein_id="YP_001708973.1" /db_xref="GI:170780641" /db_xref="GeneID:6156173" /translation="MYGVPCRGPRRTSPRIGSDPSGHASRTPGRSSVPMNAYIRSHVP GTKKLVIVESPAKAKTIAQYLGSGYEVQASVGHIRDLIEPKNLPPELKKGTLGKFSVD VENGFEPYYVVSDQKKKTVADLKRALKDADELFLATDEDREGEAIAWHLLQVLKPKVP VKRMVFHEITKEAIERARDSTRDIDTALVDAQETRRILDRLYGYEVSPVLWRKVGPGL SAGRVQSAATRLVVDRERERLAFVTASYWDLTASLSPLEQELPFDARLVRIDGARIAT GRDFDDKGALKNDSRPLDASSAEALAEALRDPSVPLKVQSVESKPYTRRPAAPFTTST LQQEAARKLRFSARQTMSVAQSLYENGYITYMRTDSPSLSQQAINAARKQAAELYGPE TVPDKPRLYAGKSKNAQEAHEAVRPAGETFRTPQQLASTLRGNDHKLYDLIWKRTIAS QMADAKGSTASVVIAAGPTSAGEVAEFAASGTVITFRGFLAAYEESRDEERHGAAEPR EAKLPDLKKGQDLRLVDVDAKGHETSPPPRYTEASLVKTLEELGIGRPSTYAAIISTI VDRGYVTPRGTALVPNWIAFSVVRLLEEFFTELVQYDFTAGMEDDLDRIAEGAAERVD WLKGFYYGNDAHKGLRPTIDNLGEIDAKEINSLRIADDITLRIGKYGPYLEVHEEGAA ADATPRRVNLPEDLAPDELTAAKARELIDAPVVTDRVIGINPDNGKQVVAKDGRYGPY VTELDPEPEPEAAPAAAADGVDPATGEVLESASTTTTAAPAKKAPAKKPAAKKAAAVK PRTASIFKSMDLATVDLETALRLLDLPRVVGEDPETATPITAQNGKYGPYLKKGTDSR SLTSEEQIFEIDLPGALEVFAQPKYGARRPSSALKEFDADPVSGKGIKVKDGRFGPYV TDGETNATIPKSESVEDIDFDRAVELLADKRAKGPAKPKAKAKAPAKAKAKAPAKAKA PAKPGAAAKATGTTAAATKAAATRAANKAAAAAATASDAT" misc_feature 223439..223801 /locus_tag="CMS_0187" /old_locus_tag="CMS0187" /inference="protein motif:HMMPfam:PF01751" /note="HMMPfam hit to PF01751, TOPRIM, score 1.7e-38" misc_feature 223841..225145 /locus_tag="CMS_0187" /old_locus_tag="CMS0187" /inference="protein motif:HMMPfam:PF01131" /note="HMMPfam hit to PF01131, DNA topoisomerase I, score 3.3e-171" misc_feature 224363..224407 /locus_tag="CMS_0187" /old_locus_tag="CMS0187" /note="PS00396 Prokaryotic DNA topoisomerase I active site." gene 226336..226971 /locus_tag="CMS_0188" /old_locus_tag="CMS0188" /db_xref="GeneID:6156174" CDS 226336..226971 /locus_tag="CMS_0188" /old_locus_tag="CMS0188" /EC_number="2.7.4.9" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="YP_001708974.1" /db_xref="GI:170780642" /db_xref="GeneID:6156174" /translation="MTGVFITLEGGDGVGKSTQSALLREWLEEQGHEVVVTREPGGSD LGQEIREIVLHRRGHIAPRAEALLYAADRAHHVETVVRPALERGAVVLQDRYLDSSVA YQGAGRVLDAAEIRDLSLWAAQGLLPDLTVLLDLDQAAARIRLDAARTRFDRLEAERA DFHERVRQAFLGLAAAEPERFLVVDAGWPREVIAAEIRARAHVLIAAGASA" misc_feature 226357..226926 /locus_tag="CMS_0188" /old_locus_tag="CMS0188" /inference="protein motif:HMMPfam:PF02223" /note="HMMPfam hit to PF02223, Thymidylate kinase, score 7.1e-61" misc_feature 226363..226386 /locus_tag="CMS_0188" /old_locus_tag="CMS0188" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 226968..228227 /locus_tag="CMS_0189" /old_locus_tag="CMS0189" /db_xref="GeneID:6156175" CDS 226968..228227 /locus_tag="CMS_0189" /old_locus_tag="CMS0189" /note="catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="YP_001708975.1" /db_xref="GI:170780643" /db_xref="GeneID:6156175" /translation="MSDAETDRAAATQAAVARGDATPASPDGRAIWDELTGQSEAVAL LAAASSPRATARDAAGTALAHSWLITGPPGSGRSNLAYAFATALLSDGTPEGDAATSR QVAARSHPDLGVLATERVIIAIDEVRALVTSSQYSPSVGRYRVMVIEDADRMTERTSN LLLKALEEPPERTIWILCAPSEADLIPTIRSRVRSVRLRIPSVEDVAALIQRRDGVDE AVALRAAREAQSHIGMAHRLATDAEARERRSRTLELALGIRTVGDAVRAAAAMLELAG QDAKAFTVQRDADERERALRSLGVQEGGSIPPQLRSQIRQLEEDQKRRATRSLRDGID RILVDLMSLHRDVLLNQLGADLPQVNAAIAPRIAEAAEAGSAAASLAVLDAVGVARRR IDGNVSPALALEAMLVSITRTRTAGRA" gene 228224..229801 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /db_xref="GeneID:6156176" CDS 228224..229801 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /codon_start=1 /transl_table=11 /product="proteinase (putative secreted protein)" /protein_id="YP_001708976.1" /db_xref="GI:170780644" /db_xref="GeneID:6156176" /translation="MTRRRTPARALRRAGALGAVLLAAAVALSGCGLIPVPEPRSSTS SPTTEDVAPDLARYYEQALTWSPCEDGAQCATATAPLDWSAPDPATDIQLALVRHTAR GADGPRGSLFVNPGGPGASGVDFVKARVDYAVSRDLQDAYDIVGWDPRGVGASTAVDC VDDSQLDSFLYGETEAPPGTPAHDEELVQASKSFAESCAARSGPLQQFIDTQSTVHDL DMLRALVGDRQLNYLGYSYGTSIGAQYAQDFPGHVGRLVLDGATDPSASSFDVVLAQT TGFRTSFESYMAACLAGQGCPFHGSVEDGEQTVATLLDRLDQSPLRARDGRELDGQVM RSAIDSALYSEQRWPALTTAFTEALRGESATAFSLADSYFGRKPDGTYSGNFYEAFLA IQCIDYPVERDPAVLVTEAAELRAAAGELADDDTSRDGEPDPLCGNWPYPARDTPAPV SAEGAAPIVVVGTTGDPATPYSWAKALAGQLSSGVLLTYEGEGHIAYDERDPCIVSAV DGYLLGGDPPAAGTTCG" sig_peptide 228224..228349 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /note="Signal peptide predicted for CMS0190 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.274 between residues 42 and 43" misc_feature 228260..228328 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /note="1 probable transmembrane helix predicted for CMS0190 by TMHMM2.0 at aa 13-35" misc_feature 228647..229753 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 2.8e-11" misc_feature 228911..228940 /locus_tag="CMS_0190" /old_locus_tag="CMS0190" /note="PS00120 Lipases, serine active site." gene 229916..229988 /locus_tag="CMS_r031" /old_locus_tag="CMSr031" /db_xref="GeneID:6156177" tRNA 229916..229988 /locus_tag="CMS_r031" /old_locus_tag="CMSr031" /product="tRNA-Thr" /note="codon recognized: ACG; tRNA Thr anticodon CGT, Cove score 81.79" /anticodon=(pos:229949..229951,aa:Thr) /db_xref="GeneID:6156177" gene 230275..231636 /locus_tag="CMS_0191" /old_locus_tag="CMS0191" /db_xref="GeneID:6159063" CDS 230275..231636 /locus_tag="CMS_0191" /old_locus_tag="CMS0191" /codon_start=1 /transl_table=11 /product="putative secreted peptidase" /protein_id="YP_001708977.1" /db_xref="GI:170780645" /db_xref="GeneID:6159063" /translation="MVALLAAGAVGAGALTGRAGSASASVAATADPTPTPSPTPTQAP PRPAPADEAAARDLRMCSISSLAQDPRLATFEGQVRDAATGRVLFDRNGSTPERTASV MKVITSAAALAALGPDRRIATTVVRGSEPGTVVLVGGGDPTLSRLTSGSSVYPGAPRL SDLAQQVRTAWAADPSTAGTPITRIVLDTSLFSGDTWIPSWAASERKAGYSSFMTPLQ LDADRADPAAVVSARSEDPLARVGSTFRSMLGGSADVTQGAAPAGARVLGKVESQPVS SLIQTALINSDNVLAESLARLVSIQVGAGNTQQSLAAGIPKALQAYGLDTSTLTIVDG QGLSPDDRVPPSLLAQLMIQVDQRQQALGYLHDGLPVAGRTGTLAGRFTGDSAVARGH VVAKTGWIDTGYTLAGIVDAADGTKLTFAFYAIGNVTGDAKIALDALAAGTYRCGADL GDE" sig_peptide 230275..230424 /locus_tag="CMS_0191" /old_locus_tag="CMS0191" /note="Signal peptide predicted for CMS0191 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.498 between residues 50 and 51" misc_feature 230569..231549 /locus_tag="CMS_0191" /old_locus_tag="CMS0191" /inference="protein motif:HMMPfam:PF02113" /note="HMMPfam hit to PF02113, Peptidase S13, D-Ala-D-Ala carboxypeptidase C, score 9.7e-14" gene 231701..232291 /locus_tag="CMS_0192" /old_locus_tag="CMS0192" /db_xref="GeneID:6156178" CDS 231701..232291 /locus_tag="CMS_0192" /old_locus_tag="CMS0192" /codon_start=1 /transl_table=11 /product="putative nicotinamidase/pyrazinamidase" /protein_id="YP_001708978.1" /db_xref="GI:170780646" /db_xref="GeneID:6156178" /translation="MTRALFIIDVQNDFTEGGALGVEGGGDVARGITGLLAAEPYRYD HVIASRDWHEATGDNGGHFAAAGVVPDFSTTWPEHCVQGTHGAEYHPDLDVTAVDFHV RKGQGAPAYSIFEGTTEDGVPLADLLALHEITDIDVVGLATDYCVLASALDAVHQGKR VRILADLVAGVAPATSAAALDRLRDAGAEIVEGPAD" misc_feature 231704..232276 /locus_tag="CMS_0192" /old_locus_tag="CMS0192" /inference="protein motif:HMMPfam:PF00857" /note="HMMPfam hit to PF00857, Isochorismatase hydrolase,score 7.3e-08" gene 232371..233846 /locus_tag="CMS_0193" /old_locus_tag="CMS0193" /db_xref="GeneID:6156179" CDS 232371..233846 /locus_tag="CMS_0193" /old_locus_tag="CMS0193" /codon_start=1 /transl_table=11 /product="succinate-semialdehyde dehydrogenase" /protein_id="YP_001708979.1" /db_xref="GI:170780647" /db_xref="GeneID:6156179" /translation="MSASTETDLLSGTPTTLLIGGERIDAEGGATFEVRDPATDEVIA RVADASPADGARALDAAVDAQAAWAATAPRARGEILRRAFDLLQERKDEFALLMTLEM GKPLAESLGEVTYGGEFLRWFSEEAVRITGRYGVNPEGTGRMIVSQHPVGPVLLITPW NFPLAMATRKIAPALAAGCTVVIKPADLTPLTTLRFAELLAEAGLPAGVLNVIPTTSA ADVTGPLIADPRLRKLSFTGSTPVGRQLGAQAAQNVLRVSLELGGNAPFVIFADADID KAVEGAVTAKFRNVGQACTAANRFIVEASIADAFADRLQERIDGMRIGRGTEEGVTVG PLIDGRAVDKADRLVRDAVERGATVRAGGTPGDGTGHFYPPTLLTGVAEGSDILREEI FGPVVAIVPFDDEDDAVRLANDTEYGLVSYVFTRDLARGQRMIERLETGMTGLNMGVI SNAAAPFGGVKQSGLGREGGLEGIHEYLNTKYTLTPDPFAS" misc_feature 232440..233834 /locus_tag="CMS_0193" /old_locus_tag="CMS0193" /inference="protein motif:HMMPfam:PF00171" /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase,score 7.3e-190" misc_feature 233145..233168 /locus_tag="CMS_0193" /old_locus_tag="CMS0193" /note="PS00687 Aldehyde dehydrogenases glutamic acid active site." misc_feature 233229..233264 /locus_tag="CMS_0193" /old_locus_tag="CMS0193" /note="PS00070 Aldehyde dehydrogenases cysteine active site." gene 233846..234658 /locus_tag="CMS_0194" /old_locus_tag="CMS0194" /db_xref="GeneID:6156180" CDS 233846..234658 /locus_tag="CMS_0194" /old_locus_tag="CMS0194" /codon_start=1 /transl_table=11 /product="putative tRNA/rRNA methyltransferase" /protein_id="YP_001708980.1" /db_xref="GI:170780648" /db_xref="GeneID:6156180" /translation="MAHVVPIEDLADPRLADYSHRTDVALRKAEGAGHGIYLAESALV LERALKAGHAPRSVLALGGTVDEALALVGDRDVPVFTGPGELLAELTGYVLHRGVVAS LDRPALPSVASLLADARRVVVLEDVVDPTNVGAIFRSVGAIGADAVLVTPRCTDPFYR RAIRVSMGTVLQVPWTRTGEWPETRAALADAGFHVAALALTPDAVSIRDFPAEDHEKL VIVLGSEGPGLSAEAIRSADTVVQIPMAHGIDSLNVAAASAVALYALAAPTR" misc_feature 234200..234634 /locus_tag="CMS_0194" /old_locus_tag="CMS0194" /inference="protein motif:HMMPfam:PF00588" /note="HMMPfam hit to PF00588, tRNA/rRNA methyltransferase (SpoU), score 2.4e-35" gene 234778..235146 /locus_tag="CMS_0195" /old_locus_tag="CMS0195" /db_xref="GeneID:6156181" CDS 234778..235146 /locus_tag="CMS_0195" /old_locus_tag="CMS0195" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708981.1" /db_xref="GI:170780649" /db_xref="GeneID:6156181" /translation="MSTRPARRRPTRLAVVYLVLAAAGLVLTWSANIRVVTEGRDFLA DLSAGGASVSSLSWDLLIAAVASVVFIVVEGRRLRMRRVWVYVLLAPLVAFAFALPLF LAAREMHLSAPERTEPTPGA" sig_peptide 234778..234867 /locus_tag="CMS_0195" /old_locus_tag="CMS0195" /note="Signal peptide predicted for CMS0195 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.292 between residues 30 and 31" misc_feature order(234814..234876,234919..234987,235024..235092) /locus_tag="CMS_0195" /old_locus_tag="CMS0195" /note="3 probable transmembrane helices predicted for CMS0195 by TMHMM2.0 at aa 13-33, 48-70 and 83-105" gene complement(235163..237094) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /db_xref="GeneID:6156182" CDS complement(235163..237094) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /codon_start=1 /transl_table=11 /product="putative ABC transporter" /protein_id="YP_001708982.1" /db_xref="GI:170780650" /db_xref="GeneID:6156182" /translation="MSTARPETAAAPRARSRNPFARRDSADDGPRARFSELLPYILEQ RGLMAFVVVLSVLGAAASLGQPLLVQRVVGVVQEGGQLGVLVWALVGLVVVSGVLSGY QHYLLQRMGEGIVLSSRRTLVRRILRLPISEFDTRRTGDLVSRVGSDTTLLRAVLTQG LVEAIGGAVTFLGAIIAMLIIDPVLLSLTVLVVAVSVVAVVGLSGRIRVASQRAQRKV GDLAASVERAIGAIRTVRASNPTDREIRAIEADAEGAWEMGIKVAKASAVVVPIAGIA LQASFLVVVGVGGYRVAAGAITVGDLVAFILFLFLMIMPLGQAFGAVTAVNQALGALG RIQEIVKLPVETDGDADLAARLRDDAPAGDDRTDAPAVELVDVRFAYPVAADADATAD GAATTEAPASPADSADASPGADRTGGGVLQGISFRAERGTRIALVGPSGAGKSTILAL IERFYDPTSGVVRVGGRDIRTLDREDLRRQIGYVEQDAPVLAGTLRENLTLTAFDATD EDCVQVLHAVNLTEVLARNELGLDAPVGEDGIMLSGGERQRLAIARTLLSAPPILLLD ESTSSLDGLNEQLLRKAIDAVAEHRTLIVIAHRLSTVVDSDLIVVVEKGRVVGTGTHA ELVVSTPLYRDLAKHQLLV" misc_feature complement(235250..235804) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.7e-52" misc_feature complement(235427..235471) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /note="PS00211 ABC transporters family signature." misc_feature complement(235760..235783) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(order(236117..236185,236228..236296, 236474..236542,236552..236620,236792..236860, 236888..236956)) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /note="6 probable transmembrane helices predicted for CMS0196 by TMHMM2.0 at aa 47-69, 79-101, 159-181, 185-207,267-289 and 304-326" misc_feature complement(236147..236953) /locus_tag="CMS_0196" /old_locus_tag="CMS0196" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 2.1e-39" gene 237329..238222 /locus_tag="CMS_0197" /old_locus_tag="CMS0197" /db_xref="GeneID:6156183" CDS 237329..238222 /locus_tag="CMS_0197" /old_locus_tag="CMS0197" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding component" /protein_id="YP_001708983.1" /db_xref="GI:170780651" /db_xref="GeneID:6156183" /translation="MKKYGDHVAVDGLSFEVAPGESFGLLGPNGAGKSTTMRMIGAVS SRTGGSLDILGLDPDTHGPEIRSQLGVVPQADNLDLELKARDNLIVYGRYFGLPRKQV AARADELLEFAQLSDRANAKVDDLSGGMKRRLTIARALISDPRILLLDEPTTGLDPQA RHILWDRLFRLKEQGTTLVLTTHYMDEAEQLCDRIVVVDEGRIMAEGSPASLIRDHSS REVLEVRFGSDRNESASREIAGYGDRVEVLPDRVLVYASDGEAVLSRILEQGLKPITT LVRRSSLEDVFLRLTGRSLVE" misc_feature 237386..237931 /locus_tag="CMS_0197" /old_locus_tag="CMS0197" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.5e-60" misc_feature 237407..237430 /locus_tag="CMS_0197" /old_locus_tag="CMS0197" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 237704..237748 /locus_tag="CMS_0197" /old_locus_tag="CMS0197" /note="PS00211 ABC transporters family signature." gene 238219..239049 /locus_tag="CMS_0198" /old_locus_tag="CMS0198" /db_xref="GeneID:6156184" CDS 238219..239049 /locus_tag="CMS_0198" /old_locus_tag="CMS0198" /codon_start=1 /transl_table=11 /product="putative ABC transporter integral membrane subunit" /protein_id="YP_001708984.1" /db_xref="GI:170780652" /db_xref="GeneID:6156184" /translation="MSAVDTREAVAAGVRPRRYGAWYAAEHRLLGIRAYLGTALATGI ASPYAYLYALGVGLATVVDRGTDANQALGVSFLVFVAPALLATSAMTVASEEFSYPIF GGFKWNPVFQAMNASPLTPAQIMDGQVIGVAIRMAPTCIAYFAFMLLFGAVPLGTGFL AIGAAVLTGMAIGVMLMAYVATLTQDTGQIAMVMRFVITPLSLFSGTFFPLTQFPVWL QWIGWISPLWHGTELGRVATYGMQEPLWLTAVHVAYLLLWLAVGWTLARRVATRRLRA" misc_feature order(238303..238371,238429..238497,238603..238671, 238699..238767,238804..238872,238948..239016) /locus_tag="CMS_0198" /old_locus_tag="CMS0198" /note="6 probable transmembrane helices predicted for CMS0198 by TMHMM2.0 at aa 29-51, 71-93, 129-151, 161-183,196-218 and 244-266" misc_feature 238540..238950 /locus_tag="CMS_0198" /old_locus_tag="CMS0198" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 1.7e-08" gene 239046..239894 /locus_tag="CMS_0199" /old_locus_tag="CMS0199" /db_xref="GeneID:6156185" CDS 239046..239894 /locus_tag="CMS_0199" /old_locus_tag="CMS0199" /codon_start=1 /transl_table=11 /product="putative ABC transporter integral membrane subunit" /protein_id="YP_001708985.1" /db_xref="GI:170780653" /db_xref="GeneID:6156185" /translation="MTGSTMPANAPAPAPAARRSRGGPRSLYAGNARSVLSRGLLATR STNWTVVLSGFFEPVFYLLAMGIGLGSLVGDVTTSTGQPVPYAAYIAPALLAVSAMNG AVYDSTWNVFFKMNHSKLYQGMLATSLGPLDVAFGEISLALLRGVVYSSGFLVVMQVL GLNLSWWAILALPSVVLVALAFASFGMAVTSYMKTFQQMDWINFILLPMFLFSATFYP LSVYPAWIQTVIQALPLWHAVELVRGFTTGALSFAVVGHVLYFAVMTAIGLVSTTRRL RVLFLD" misc_feature order(239196..239264,239292..239360,239418..239486, 239544..239612,239649..239717,239787..239855) /locus_tag="CMS_0199" /old_locus_tag="CMS0199" /note="6 probable transmembrane helices predicted for CMS0199 by TMHMM2.0 at aa 51-73, 83-105, 125-147, 167-189,202-224 and 248-270" misc_feature 239397..239801 /locus_tag="CMS_0199" /old_locus_tag="CMS0199" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 5.1e-16" gene complement(239779..241200) /locus_tag="CMS_0200" /old_locus_tag="CMS0200" /db_xref="GeneID:6156186" CDS complement(239779..241200) /locus_tag="CMS_0200" /old_locus_tag="CMS0200" /note="Overlap with downstream CDS possibly due to mutation leading to late stop." /codon_start=1 /transl_table=11 /product="MFS family transporter" /protein_id="YP_001708986.1" /db_xref="GI:170780654" /db_xref="GeneID:6156186" /translation="MPGAAGDARPPRPPLLISRSFALIWLAQALSAFGEYVLAATVTV WLAMGLAPGDPALPLYIGAVIGATSLPRLVLAPVAGVLVDRWPAGRVMVAADVARAGL LVPLMVIAVTGPTPLVIAAVITTQLLIGSVSQLFDPARAALVQVVVPADRRAAAAGRS LLASTGVGILSAMTGPAVYAALGPQPALAMDAVSFLASAALVLAVRERGATAAGAGAL GTDADADAHGSVASARARFRAELAAGIRIVRASPRLRILVAGLAAYGVTLGVNNATLA LVALTTMGLTAAEYGVVTAMFAVGGLVGSFTAPALVARIRPERALPASLVALGATYAA YSTVRAFLPAAILMGLAGLVFAVFLVSQGPILQAEAPVGTMGRVSSLTSTVLAGSSFL ATVVTAQVLALVPASAQPAAYPAAIATAAVVMGSAGVALVAGGLSRGRGPAAAASWRP GRWPSSPRSRARGRRPRTRARPS" misc_feature complement(order(239896..239964,239992..240060, 240097..240165,240175..240243,240262..240330, 240367..240435,240586..240642,240655..240723, 240832..240900,240958..241026,241063..241131)) /locus_tag="CMS_0200" /old_locus_tag="CMS0200" /note="11 probable transmembrane helices predicted for tmhmm2embl_unknown_000000_239779_241200 by TMHMM2.0 at aa 24-46, 59-81, 101-123, 160-182, 187-205, 256-278, 291-313,320-342, 346-368, 381-403 and 413-435" misc_feature complement(239995..241131) /locus_tag="CMS_0200" /old_locus_tag="CMS0200" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 241359..242171 /locus_tag="CMS_0201" /old_locus_tag="CMS0201" /db_xref="GeneID:6156187" CDS 241359..242171 /locus_tag="CMS_0201" /old_locus_tag="CMS0201" /codon_start=1 /transl_table=11 /product="carbohydrate kinase" /protein_id="YP_001708987.1" /db_xref="GI:170780655" /db_xref="GeneID:6156187" /translation="MVLGSLNVDQVVRVPRHPQPGETLMGSDPERLWGGKGANQAVAA ADAGGEVAMVGAVGDDADGSAYRARLTARGIDVTGLATVDGATTGLAIIAVDDDGENT IIVAPGANGRVTSTHLDPLDALAAGDVLLASLELPLDTISEGVRRAHAAGARVVLNLA PFAALPADVLALADPVVVNEHEAGLLRGSGTPAPASLLVTLGAEGAMWGDVEVPASKV SRVVDTTGAGDAFCGALASALAAGADRGAALVVAADAAAVVVQRQGAQPADD" misc_feature 241359..242165 /locus_tag="CMS_0201" /old_locus_tag="CMS0201" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 4.3e-44" misc_feature 241458..241532 /locus_tag="CMS_0201" /old_locus_tag="CMS0201" /note="PS00583 pfkB family of carbohydrate kinases signature 1." misc_feature 242025..242066 /locus_tag="CMS_0201" /old_locus_tag="CMS0201" /note="PS00584 pfkB family of carbohydrate kinases signature 2." gene 242177..242737 /locus_tag="CMS_0202" /old_locus_tag="CMS0202" /db_xref="GeneID:6156188" CDS 242177..242737 /locus_tag="CMS_0202" /old_locus_tag="CMS0202" /note="Has hydrophobis regions but no predicted membrane spans." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708988.1" /db_xref="GI:170780656" /db_xref="GeneID:6156188" /translation="MGDAGPDPHGAAASVVAFVRALATPPWPRHVADAERMLAALGVR PTCDVDAYDPDSDPDPDSELRSLTGSPDAVDHLSLGTHAGGVTIIGFFLARHGRPRDP LVRRDHDALVAALAAAFGVFCPAFDDQPSPVLWDVGELEVGVQLFDRVDSSVMVWVDH RERSVRAEAAAGDGSTAVSADAADPA" gene complement(242709..243230) /locus_tag="CMS_0203" /old_locus_tag="CMS0203" /db_xref="GeneID:6156189" CDS complement(242709..243230) /locus_tag="CMS_0203" /old_locus_tag="CMS0203" /codon_start=1 /transl_table=11 /product="putative DNA-binding membrane protein" /protein_id="YP_001708989.1" /db_xref="GI:170780657" /db_xref="GeneID:6156189" /translation="MNETRIVELRRERGWTQDRLAEASGITVRTVQRLEAGNDASLET LSLVAKALEVPVRDLFAVVGEGDFGRTVSALDDRAERQQERRDAVTDGFRSLYHGVGV VWTLLVVAGIATRVLPGVGALLIAAYWAGGALLSGFLLRVVVGPRLDRAYPLSRDRSS DEQAVTRGRRRPR" misc_feature complement(order(242799..242867,242880..242948)) /locus_tag="CMS_0203" /old_locus_tag="CMS0203" /note="2 probable transmembrane helices predicted for CMS0203 by TMHMM2.0 at aa 116-138 and 143-165" misc_feature complement(243054..243215) /locus_tag="CMS_0203" /old_locus_tag="CMS0203" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 4.6e-15" misc_feature complement(243123..243188) /locus_tag="CMS_0203" /old_locus_tag="CMS0203" /note="Predicted helix-turn-helix motif with score 1720.000, SD 5.05 at aa 36-57, sequence WTQDRLAEASGITVRTVQRLEA" gene 243373..243663 /locus_tag="CMS_0204" /old_locus_tag="CMS0204" /db_xref="GeneID:6156190" CDS 243373..243663 /locus_tag="CMS_0204" /old_locus_tag="CMS0204" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708990.1" /db_xref="GI:170780658" /db_xref="GeneID:6156190" /translation="MPSETRSRFREQAEGALATFAGIATYLLLQVARRTEVRTEGDRV LVVVCTIVAIATAAVVVVIAVRSAVRRRRERVAAEARAVEPLVGDPDGGSGS" misc_feature order(243409..243468,243499..243567) /locus_tag="CMS_0204" /old_locus_tag="CMS0204" /note="2 probable transmembrane helices predicted for CMS0204 by TMHMM2.0 at aa 13-32 and 43-65" gene complement(243660..243869) /locus_tag="CMS_0205" /old_locus_tag="CMS0205" /db_xref="GeneID:6156191" CDS complement(243660..243869) /locus_tag="CMS_0205" /old_locus_tag="CMS0205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708991.1" /db_xref="GI:170780659" /db_xref="GeneID:6156191" /translation="MVADMRILAATLAGSGALVLAVALGAVMGGIAGEEPGGIAVAWW FVAAGAALVLVALVVEVARHRGLRR" sig_peptide complement(243660..243758) /locus_tag="CMS_0205" /old_locus_tag="CMS0205" /note="Signal peptide predicted for CMS0205 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.466 between residues 33 and 34" misc_feature complement(order(243687..243755,243783..243851)) /locus_tag="CMS_0205" /old_locus_tag="CMS0205" /note="2 probable transmembrane helices predicted for CMS0205 by TMHMM2.0 at aa 7-29 and 39-61" misc_feature complement(243753..243845) /locus_tag="CMS_0205" /old_locus_tag="CMS0205" /note="PS00044 Bacterial regulatory proteins, lysR family signature." gene complement(243869..244423) /locus_tag="CMS_0206" /old_locus_tag="CMS0206" /db_xref="GeneID:6156192" CDS complement(243869..244423) /locus_tag="CMS_0206" /old_locus_tag="CMS0206" /codon_start=1 /transl_table=11 /product="putative sulphur-binding protein" /protein_id="YP_001708992.1" /db_xref="GI:170780660" /db_xref="GeneID:6156192" /translation="MQPSASPRVLAVARDDAHRFSKPVRPSITLLAGLGVEGDAHLGT TVQHLSRKRRDPDAPNLRQVHLVHAELHAELAGKGFTVGPGDLGENVTTAGIPLLDLP TGTRLHLGDEAVVELTGLRNPCIQIDKLGSGAMKAVLDRDADGNVVRKSGVMGVVITG GEVRPDDAVRVELPAGEQRALQPV" misc_feature complement(243911..244324) /locus_tag="CMS_0206" /old_locus_tag="CMS0206" /inference="protein motif:HMMPfam:PF03473" /note="HMMPfam hit to PF03473, MOSC, score 3.7e-09" gene 244544..245233 /locus_tag="CMS_0207" /old_locus_tag="CMS0207" /db_xref="GeneID:6156193" CDS 244544..245233 /locus_tag="CMS_0207" /old_locus_tag="CMS0207" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001708993.1" /db_xref="GI:170780661" /db_xref="GeneID:6156193" /translation="MRATAMSGSRRTTLVAGLASAGALLLQPVLLGGFRIQPTPDMAS TIVLQGPVVDVLGVVLTVVAAVVLARGVRGEPGLMRASRAAAIAVLVAAGGLVVLAVA DVIVGLSLADPREPVLPAGVVIVTQVAGAIHEAALAVLAVMVVRGLLLEPLARVSLLV LALATAVSWLLYAGLGSFLPGGAWSPLMLLLVALPTVTLLASVGLAVGLVVHGRSAAM RERAEAIHRAW" sig_peptide 244544..244648 /locus_tag="CMS_0207" /old_locus_tag="CMS0207" /note="Signal peptide predicted for CMS0207 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.422 between residues 35 and 36" misc_feature order(244580..244648,244691..244759,244796..244864, 244907..244975,245012..245080,245108..245176) /locus_tag="CMS_0207" /old_locus_tag="CMS0207" /note="6 probable transmembrane helices predicted for CMS0207 by TMHMM2.0 at aa 13-35, 50-72, 85-107, 122-144,157-179 and 189-211" gene complement(245300..246652) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /db_xref="GeneID:6156194" CDS complement(245300..246652) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001708994.1" /db_xref="GI:170780662" /db_xref="GeneID:6156194" /translation="MVIASLIGTSIEFFDFYVYATAAVLVFPALFFANDDPAVAQLQS LAVFGVAFFARPIGSVLFGHFGDRFGRTHTLVASLLTMGIATVLIGSLPSGLTPGWEI AAPATLAVLRFIQGLGLGGEWGGAALLATENAPEGKRAVYGTFPQLGAPIGFFLSTGL FLVLSLTLSPADLQSWGWRVPFLASAVLVLVGLYVRVKLVEAPEFQAVLDRGETSRLP LGRTIRTGWRGLVLGALALLAIFTLFYLMTTFTVTYGTSPRTAEAAEAAATKAGKPFD ASSFHAGLGYARTDFLLMLLVGVVFFAIAIVVSGVLAERRGARPVVAVSAAGMVVFGL LMDPLLATGVPGALLFVILGFALIGIGYGAVGSLLPGLFATDVRYTGASLAFSLAGII GGAVAPFIATWLWDIGGGGVALVGVYLSVASAISLVALLVVREHGQAKAAPAEAVAAR" misc_feature complement(245330..246652) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.1e-43" misc_feature complement(order(245360..245428,245441..245509, 245546..245614,245627..245695,245714..245782, 245897..245965,246062..246130,246158..246226, 246263..246331,246359..246427,246461..246529, 246557..246616)) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /note="12 probable transmembrane helices predicted for CMS0208 by TMHMM2.0 at aa 13-32, 42-64, 76-98, 108-130,143-165, 175-197, 230-252, 291-313, 320-342, 347-369,382-404 and 409-431" misc_feature complement(245435..246640) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature complement(246236..246313) /locus_tag="CMS_0208" /old_locus_tag="CMS0208" /note="PS00217 Sugar transport proteins signature 2." gene complement(246817..248157) /locus_tag="CMS_0209" /old_locus_tag="CMS0209" /db_xref="GeneID:6156195" CDS complement(246817..248157) /locus_tag="CMS_0209" /old_locus_tag="CMS0209" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001708995.1" /db_xref="GI:170780663" /db_xref="GeneID:6156195" /translation="MIIASLIGTSIEFYDFYVYATAAVLVFPALFFANDDPTVAQLAS FAVFGVAFIARPIGSILFGHFGDRVGRKGTLVASLLTMGIATVLIGCLPTALTPGWEV AAPALLVIMRFGQGLGLGGEWSGAALLATENAPAGKRAIYGTFPQLGAPIGFIVANGV FLALSLGLSPEQFQAWGWRVPFLASAVLVIVGLYVRLKLIETPAFQKVVDSGEVAKLP VARVFVTSWRPLILGTFIMLATYTLFYLMTTFTLTYGTTARDAATAEAAATAAGKPFN ADTFAAGLGYARNDFLLMLIVGVVFFGIFTMVSGPLAEKHGRRKMLIATTVGILVFGL LFVPLFSAGFVGTMALLILGFTLMGLTFGPMGAVLPELFPTNVRYTGSAISYNVASIL GAAVAPFIAVALWQLLDGNVLLVGVYLSAMAAITLVALVISRETRDADYAGNVS" misc_feature complement(246829..248157) /locus_tag="CMS_0209" /old_locus_tag="CMS0209" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.9e-58" misc_feature complement(order(246862..246930,246943..247011, 247048..247116,247126..247194,247219..247287, 247402..247470,247567..247635,247663..247731, 247768..247836,247864..247932,247966..248034, 248062..248130)) /locus_tag="CMS_0209" /old_locus_tag="CMS0209" /note="12 probable transmembrane helices predicted for CMS0209 by TMHMM2.0 at aa 71-93, 103-125, 137-159,169-191, 204-226, 236-258, 291-313, 352-374, 383-405,409-431, 444-466 and 471-493" misc_feature complement(246940..248145) /locus_tag="CMS_0209" /old_locus_tag="CMS0209" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 248449..248745 /locus_tag="CMS_0210" /old_locus_tag="CMS0210" /db_xref="GeneID:6156196" CDS 248449..248745 /locus_tag="CMS_0210" /old_locus_tag="CMS0210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708996.1" /db_xref="GI:170780664" /db_xref="GeneID:6156196" /translation="MEHETGRQVLPGLAKLCGVGAFAAVATGYWYLAIPCVAVVVLCV LQLRRWTHQELEERARLAESPTEEDHAEALRWDEDGGVALDPLPSDEPGPDDRR" misc_feature 248515..248583 /locus_tag="CMS_0210" /old_locus_tag="CMS0210" /note="1 probable transmembrane helix predicted for CMS0210 by TMHMM2.0 at aa 47-69" gene complement(248756..249718) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /db_xref="GeneID:6156197" CDS complement(248756..249718) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001708997.1" /db_xref="GI:170780665" /db_xref="GeneID:6156197" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(248768..249310) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.7e-38" misc_feature complement(249395..249460) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(249460..249581) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(249581..249646) /locus_tag="CMS_0211" /old_locus_tag="CMS0211" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(249846..250004) /locus_tag="CMS_0212" /old_locus_tag="CMS0212" /db_xref="GeneID:6156198" CDS complement(249846..250004) /locus_tag="CMS_0212" /old_locus_tag="CMS0212" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001708998.1" /db_xref="GI:170780666" /db_xref="GeneID:6156198" /translation="MPLIRFLFVAVPVIRKFLRSRQGKAALAKGKAQMAKRSQKRAAQ RTTPTSRR" gene complement(250146..250670) /locus_tag="CMS_0213" /old_locus_tag="CMS0213" /db_xref="GeneID:6156199" CDS complement(250146..250670) /locus_tag="CMS_0213" /old_locus_tag="CMS0213" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001708999.1" /db_xref="GI:170780667" /db_xref="GeneID:6156199" /translation="MDSPVAGDPVPATMRCMPFVTVRPMTPSEFAEMMAAADEDYAAR QVEAGLWPAEGARERSAAETAKWLPDGMRTPRTLLLRGIDEDGVGVGSAWVALDDPNG RPDTAFLFELLVDPSRRGSGYGRAVLAAVEEATRAAGSPALALNVFGANRVAIALYAS AGYDVTAQQMRKAL" misc_feature complement(250179..250430) /locus_tag="CMS_0213" /old_locus_tag="CMS0213" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.2e-13" gene complement(250679..251647) /locus_tag="CMS_0214" /old_locus_tag="CMS0214" /db_xref="GeneID:6156200" CDS complement(250679..251647) /locus_tag="CMS_0214" /old_locus_tag="CMS0214" /codon_start=1 /transl_table=11 /product="putative reductase" /protein_id="YP_001709000.1" /db_xref="GI:170780668" /db_xref="GeneID:6156200" /translation="MHSSPSSSSRRALVLGGTGAIGGATAERLARDGWSVDVTGRDQV AMPAELTDLGVRFHALDRADARGIEGLVGDGVDLLVDLVAFTAADVDALLPAMRASGS VVVASSRAVYVDDAGRHINGDEPPRFPVPIPEANATLAPAATGTDPFSREGYAPSKVA VERAALDSGLRVTVIRPSKVHGRWARNARTRAITERMLAGAETIELADRGASVDHLTA AGNAAALIARIADAPGSRVLNAADPDRLTAAEIVAVIADELGWRGRIVPLEPGVDGGA HPWAAAHPIVLDTRASLALGYAPVGPGAELLHAEVAWIRDGERPRA" gene 251685..252221 /locus_tag="CMS_0215" /old_locus_tag="CMS0215" /db_xref="GeneID:6156201" CDS 251685..252221 /locus_tag="CMS_0215" /old_locus_tag="CMS0215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709001.1" /db_xref="GI:170780669" /db_xref="GeneID:6156201" /translation="MAAMIRLEEHRSGWADAFHAEAARILAAAGPALLTVEHIGSTAV PGIRAKPVIDLAARAAPGIDPLGLDAVLAPLDYAQHRTGPRNHGVHVRSADGARTHIL HVFAADAWDACPQRLFRDRLLRDPDARRRYDALKTALAATAADGRAYTAAKQGLVEEL VNAERADRGLPPVRVWDK" misc_feature 251694..252182 /locus_tag="CMS_0215" /old_locus_tag="CMS0215" /inference="protein motif:HMMPfam:PF04229" /note="HMMPfam hit to PF04229, Protein of unknown function UPF0157, score 1.3e-18" gene 252209..252652 /locus_tag="CMS_0216" /old_locus_tag="CMS0216" /db_xref="GeneID:6156202" CDS 252209..252652 /locus_tag="CMS_0216" /old_locus_tag="CMS0216" /codon_start=1 /transl_table=11 /product="putative cytidine deaminase" /protein_id="YP_001709002.1" /db_xref="GI:170780670" /db_xref="GeneID:6156202" /translation="MGQVTGGGRRAVRQDFRMPLHESEVRLIDAAEALARTLGADPNH TMAAAALDADGRIHTGVNVLHFTGGPCAELVALGAAVAANAGRLVAMAAVGDGGRGIA PPCGRCRQVMLDLHPDVRVAVPGAGGPEFVPIRELLPVSYALPDA" misc_feature 252272..252583 /locus_tag="CMS_0216" /old_locus_tag="CMS0216" /inference="protein motif:HMMPfam:PF00383" /note="HMMPfam hit to PF00383, Cytidine/deoxycytidylate deaminase, zinc-binding region, score 1.8e-05" misc_feature 252419..252544 /locus_tag="CMS_0216" /old_locus_tag="CMS0216" /note="PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature." gene complement(252848..253279) /locus_tag="CMS_0217" /old_locus_tag="CMS0217" /db_xref="GeneID:6156203" CDS complement(252848..253279) /locus_tag="CMS_0217" /old_locus_tag="CMS0217" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709003.1" /db_xref="GI:170780671" /db_xref="GeneID:6156203" /translation="MIAAVAAAGGTAWWLGDERGTVAMLELEPPPVPDNATYLSVDTG SIAPGSLFAPFDGIAVGRVPRVEAATGDAVTCLVAGPPKQDGSVSGHEGCATGTVPAR TALVVTADQPQELRDAFPLGTTLTFELEDDGETVRVRTVGG" gene complement(253622..254503) /locus_tag="CMS_0218" /old_locus_tag="CMS0218" /db_xref="GeneID:6156204" CDS complement(253622..254503) /locus_tag="CMS_0218" /old_locus_tag="CMS0218" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709004.1" /db_xref="GI:170780672" /db_xref="GeneID:6156204" /translation="MRPLRSAVLVSAALLALSGCAAADPGPGSASTGASASADTAGVL AADTTAAAAVTLPPTGTGFDYQLGGASPVPAGAGIVVRDSTDEPAEGAYGICYVNGFQ TQPGATWPDGLLVQGDDGPLVDPGWPDEYILDTSTAAKRTAIAARQANTVDLCADAGF RAVEFDNLDSWNRSQGALDADDALALATLLVDHAHSRGLAVAQKNTTDIGSRGRDEAG FDFAIAEECDRWDECAAFTDVYGPHVLDVEYTDDLRGTAGQVCGRIRALDPAPRAIVR DRDLVPAVEDGYAYAAG" sig_peptide complement(253622..253735) /locus_tag="CMS_0218" /old_locus_tag="CMS0218" /note="Signal peptide predicted for CMS0218 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.379 between residues 31 and 32" gene complement(254527..255489) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /db_xref="GeneID:6156205" CDS complement(254527..255489) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709005.1" /db_xref="GI:170780673" /db_xref="GeneID:6156205" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLARAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(254539..255081) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 9.5e-39" misc_feature complement(255166..255231) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(255231..255352) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(255352..255417) /locus_tag="CMS_0219" /old_locus_tag="CMS0219" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(255587..256060) /locus_tag="CMS_0220" /old_locus_tag="CMS0220" /db_xref="GeneID:6156206" CDS complement(255587..256060) /locus_tag="CMS_0220" /old_locus_tag="CMS0220" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709006.1" /db_xref="GI:170780674" /db_xref="GeneID:6156206" /translation="MRAACSHARRSYDRHMTTTPEPDLPPVEFAFPGPLRDQLVAAIA SGEKTSTSSLLIQYDADDEELPVVGSRGSVIDSDGRPVLVVETTYVEVARLADVPLAH AVDEGEGFTTVAEWRAGHEGFWGSAEVLAELPDGFALDDDTEIVLERFRVVDGRA" misc_feature complement(255599..255979) /locus_tag="CMS_0220" /old_locus_tag="CMS0220" /inference="protein motif:HMMPfam:PF06171" /note="HMMPfam hit to PF06171, Protein of unknown function DUF984, score 2e-42" gene 256080..257060 /locus_tag="CMS_0221" /old_locus_tag="CMS0221" /db_xref="GeneID:6156207" CDS 256080..257060 /locus_tag="CMS_0221" /old_locus_tag="CMS0221" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709007.1" /db_xref="GI:170780675" /db_xref="GeneID:6156207" /translation="MLPGRALPLGPGWRRPHSTRKAHPMSEIRNGGNQYEIQDPIAQY PSPPFPQQEQTGPGDEMKFEPTPDHGQDSYVGFGRLAGRKVLITGADSGIGKAVAIAF AREGADIALNFLDEELEDARDTASTIEQDGRTAALVPGDISDETTCGDIVQASVDALG GLDCLVMVAGYQRNEDDILDLDSEQLDRTMKTNVYSLFWLSKAVIPHLPKGGSIITTS SSQAYQPSADKIDYAVSKGAIRNFTQGLAQQLAPKGVRVNSVAPGPFWTVLQPVGQSA SDVEEFGSQSVYGRPGQPAEIAATYVFLASQESSFTSGETIAVTGGTPVH" misc_feature 256332..257048 /locus_tag="CMS_0221" /old_locus_tag="CMS0221" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.5e-58" misc_feature 256734..256820 /locus_tag="CMS_0221" /old_locus_tag="CMS0221" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene complement(257100..257672) /locus_tag="CMS_0222" /old_locus_tag="CMS0222" /db_xref="GeneID:6156208" CDS complement(257100..257672) /locus_tag="CMS_0222" /old_locus_tag="CMS0222" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709008.1" /db_xref="GI:170780676" /db_xref="GeneID:6156208" /translation="MADLPFEHRVEVAFLVASPVHRLEGRPSDGPRDEPGEPPSRPSV RVRAGLGIVGDRYFGQRAHRTAAVTVMAVEQVERVARELGVDAGLDPVDTRRNVLLRG ADVDRLRGMRFSIDSGHGPVEFQGHRPANPCAWMDVMLAPGAFRALRGHGGVRCELLG DGILTVGPAVLRTERPLDDGDGDDAGARLF" gene 257781..259481 /locus_tag="CMS_0223" /old_locus_tag="CMS0223" /db_xref="GeneID:6156209" CDS 257781..259481 /locus_tag="CMS_0223" /old_locus_tag="CMS0223" /codon_start=1 /transl_table=11 /product="putative membrane-embedded two-component sensor kinase" /protein_id="YP_001709009.1" /db_xref="GI:170780677" /db_xref="GeneID:6156209" /translation="MGELAPSDVPRGQRSRAQAVFRSMTFSKPLHAQLPFILSLAVVG VVAGTGDLASVADPVFVAGAVIAAIVTIVAAAVPWDRIDSDWVAVLPMLDFVALALCR DAIADQVPSTTFLLVFPVIWLAYAFPLHVLWLGAIGTASVLALPYVRAGTLPDGTTGW SHLVVLPLVMLLVAVAVNLLAQQLIRQHARLEEMQLELTGTLVDLQERNSIIDGVLDA IDDTVTVLDAEGRVMLRNRAAHDLMALADPLDPDDPMLGRLVYEEDRTTVVPPERQPV ARARAGEVVGREVYWVGDGGAQKAVLASISPLVDGAGRTFGTVVVSTDVTALALAVTE REEFVASVSHELKTPLTSILGYVELIADDLEEDDLDDRITAARLAIVERNAQRLLGLI GDLLTAAQHRLAVNRNLVDVGEIVENALDVIRPHAQASGVTLVEPEYEELVAEVDAVR IGQVLDNLLSNAVKYTPEGGTVTTAVGVEGEHLSLCVTDDGVGMSAEDTAQLFTRFFR TNSARASTVAGVGLGLSITRSIVEAHDGSIEVESTLGTGTTMRVRLPLRVARAAPRPT" misc_feature order(257868..257936,257955..258014,258090..258158, 258171..258239,258252..258320) /locus_tag="CMS_0223" /old_locus_tag="CMS0223" /note="5 probable transmembrane helices predicted for CMS0223 by TMHMM2.0 at aa 30-52, 59-78, 104-126, 131-153 and 158-180" misc_feature 258780..258992 /locus_tag="CMS_0223" /old_locus_tag="CMS0223" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 5.4e-18" misc_feature 259116..259451 /locus_tag="CMS_0223" /old_locus_tag="CMS0223" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 3.7e-42" gene 259631..260398 /locus_tag="CMS_0224" /old_locus_tag="CMS0224" /db_xref="GeneID:6156210" CDS 259631..260398 /locus_tag="CMS_0224" /old_locus_tag="CMS0224" /codon_start=1 /transl_table=11 /product="putative two-component system phosphotransfer protein" /protein_id="YP_001709010.1" /db_xref="GI:170780678" /db_xref="GeneID:6156210" /translation="MPYRVDGCAAGTRRRPPRSFGSSRRRPGVSAHAARVPQLPPLLD VRVLEQLLAELSDVPGPVRLSVVPATDAPAPPPGVPAPGGVTPPRGHPEPRRGTPSSG SPRPDDRLATPGAPAPGCGQAPAGSPRPVGAPTSAPAASEPTCPGALTDGQHACIDFL RFFVDLWPSRWERLDAAVRAGDRAAALDACLSVKSSAAMVGALLLSDAAGQLERAIRA ADHGRATAMLPELGEAGVRSMDAMRSWVRAEAGHPPD" misc_feature 260102..260332 /locus_tag="CMS_0224" /old_locus_tag="CMS0224" /inference="protein motif:HMMPfam:PF01627" /note="HMMPfam hit to PF01627, Hpt, score 1.9e-05" gene complement(260591..261394) /locus_tag="CMS_0225" /old_locus_tag="CMS0225" /db_xref="GeneID:6156211" CDS complement(260591..261394) /locus_tag="CMS_0225" /old_locus_tag="CMS0225" /codon_start=1 /transl_table=11 /product="putative two component response regulator" /protein_id="YP_001709011.1" /db_xref="GI:170780679" /db_xref="GeneID:6156211" /translation="MVLRQGGFEVHAAGTATEGVRLAEEVSPDVITLDVGLPDFDGFE AARRIRLVSDAYIVMLTAQGEEVDTLLGLEAGADDYIVKPFRPRELRARISAMMRRPR GGGGDTTTTPAAGIPAAPDVPEAAVDADEPVQPVQPAAVATTTVVPPAPTTEATPDDE VLRHNGLELDEGTRHVTVDGEPVDLTRTEFDLLASILASGGRVRTKGDLVRDIRSGSY AVASSTEPEERAVEVHLGNLRRKLHDDPREARWIQTVRGVGYRLAPPRG" misc_feature complement(260609..260857) /locus_tag="CMS_0225" /old_locus_tag="CMS0225" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 3.1e-15" misc_feature complement(261089..261391) /locus_tag="CMS_0225" /old_locus_tag="CMS0225" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 6.8e-20" gene complement(261591..261959) /locus_tag="CMS_0226" /old_locus_tag="CMS0226" /db_xref="GeneID:6156212" CDS complement(261591..261959) /locus_tag="CMS_0226" /old_locus_tag="CMS0226" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709012.1" /db_xref="GI:170780680" /db_xref="GeneID:6156212" /translation="MPRWILRIDRRILVTTLVSMLVAAVVGGSIAALGLGLIFVTDSC DVDAYVCRDSLFTIGYGIAVAGPLMLTGIAVIVALVGMIRGRTRPWLVLLIGVGASLA AYILGAVLVLVSVPGSSPIT" sig_peptide complement(261591..261686) /locus_tag="CMS_0226" /old_locus_tag="CMS0226" /note="Signal peptide predicted for CMS0226 by SignalP 2.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.330 between residues 32 and 33" misc_feature complement(order(261624..261692,261729..261797, 261855..261923)) /locus_tag="CMS_0226" /old_locus_tag="CMS0226" /note="3 probable transmembrane helices predicted for CMS0226 by TMHMM2.0 at aa 13-35, 55-77 and 90-112" gene complement(262217..263053) /locus_tag="CMS_0227" /old_locus_tag="CMS0227" /db_xref="GeneID:6156213" CDS complement(262217..263053) /locus_tag="CMS_0227" /old_locus_tag="CMS0227" /codon_start=1 /transl_table=11 /product="putative exonuclease" /protein_id="YP_001709013.1" /db_xref="GI:170780681" /db_xref="GeneID:6156213" /translation="MRVATWNVNSIRTRVGRVVDWLVREDVDVLAMQEIKCKPEQFPM AAFEEADYEVAVHGLSQWNGVAIASRLPLEDVVTTFEGMPRFGKPDATGQPPLEARAM GATVAGVRLWSLYVPNGRALDDPHYSYKLEWLQALAADTRAWLAADPATPLALMGDWN VAPLDTDVWDPALFEGKTHTSEPERAAFAAFLDAGLADVVRPSIPEGYTYWDYQQLRF PRNEGMRIDFILGNDRFSELVGAPRIHRDERKGDGPSDHVPVAVDLDVETELDDDRPM IF" misc_feature complement(262262..263053) /locus_tag="CMS_0227" /old_locus_tag="CMS0227" /inference="protein motif:HMMPfam:PF03372" /note="HMMPfam hit to PF03372,Endonuclease/exonuclease/phosphatase, score 1.8e-45" gene complement(263122..263520) /locus_tag="CMS_0228" /old_locus_tag="CMS0228" /db_xref="GeneID:6156214" CDS complement(263122..263520) /locus_tag="CMS_0228" /old_locus_tag="CMS0228" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709014.1" /db_xref="GI:170780682" /db_xref="GeneID:6156214" /translation="MTLDDDASAASPAPVPVPLPSAADLSRDLTAVLRGVAGVADVYA PRSPILLAAQQVVEGVVAGSSTATEQLVTVETGEGTVLVEASIAVDASSRASDTARAA VDAIRARLSDAIGTDAAARAAVTVRVGSIG" gene complement(263517..264158) /locus_tag="CMS_0229" /old_locus_tag="CMS0229" /db_xref="GeneID:6156215" CDS complement(263517..264158) /locus_tag="CMS_0229" /old_locus_tag="CMS0229" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709015.1" /db_xref="GI:170780683" /db_xref="GeneID:6156215" /translation="MSGTGPGDPGERLPGDPATAPALDADGTPLDMAALADYLDRGRT PRIAAYEDDPETRNALRALEHMRDLGRELVQVEAEEQEAPGDDFFRGVLAHISRESRA GRDIPLSHPDPAVSLALTEGAVRALVRQAGDEVPGVLVGRCTLDGDVTVAGEPVRVGL TVSVVWGDPLPELAQRVRERVHAALLRHTELRVEGIDVTVVDVQARPVPEEAG" gene complement(264155..264709) /locus_tag="CMS_0230" /old_locus_tag="CMS0230" /db_xref="GeneID:6156216" CDS complement(264155..264709) /locus_tag="CMS_0230" /old_locus_tag="CMS0230" /codon_start=1 /transl_table=11 /product="putative RNA polymerase sigma factor" /protein_id="YP_001709016.1" /db_xref="GI:170780684" /db_xref="GeneID:6156216" /translation="MALSSSLQDAGDSILAERAADGDARAFEVLVRRHAPYMRAFAIR LTGSRADADDAVQEALITAWDRLPTLEKPDRVKSWLLQIVSRKSIDRIRARRPADDID DHEIADRLTSPERDAETSSQMRALAGVLDALPREQREVWMLREVGGFSYEEIAEKLGA TPSTVRGRLSRARTTVMTSMEAWR" misc_feature complement(264200..264265) /locus_tag="CMS_0230" /old_locus_tag="CMS0230" /note="Predicted helix-turn-helix motif with score 1735.000, SD 5.10 at aa 149-170, sequence FSYEEIAEKLGATPSTVRGRLS" misc_feature complement(264416..264622) /locus_tag="CMS_0230" /old_locus_tag="CMS0230" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 2.2e-18" gene 264831..265295 /locus_tag="CMS_0231" /old_locus_tag="CMS0231" /db_xref="GeneID:6156217" CDS 264831..265295 /locus_tag="CMS_0231" /old_locus_tag="CMS0231" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709017.1" /db_xref="GI:170780685" /db_xref="GeneID:6156217" /translation="MSDQNTSTPADVTCVAPATTGIATGSVLAEGDTTVTDGVIAKVA GLAVRDIPGVHALGGGAARVIGQLRDRIGQTDLTQGIAVDAQEAGVSFEVTLVAEYGV PLQDVAADVRAAISDAVTELVGRPVTRVDVTVADIVMPGEGSDDAAVEAPAV" misc_feature 264915..265244 /locus_tag="CMS_0231" /old_locus_tag="CMS0231" /inference="protein motif:HMMPfam:PF03780" /note="HMMPfam hit to PF03780, Protein of unknown function DUF322, score 7.5e-13" gene 265467..266342 /locus_tag="CMS_0232" /old_locus_tag="CMS0232" /db_xref="GeneID:6156218" CDS 265467..266342 /locus_tag="CMS_0232" /old_locus_tag="CMS0232" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_001709018.1" /db_xref="GI:170780686" /db_xref="GeneID:6156218" /translation="MALLGTGVMGAGMSRSILRAGLPLRVWNRSAGKAAPLADAGATV ADSAADAVRDADVVVVMLFDADAVLEVLAEVAPALRPDAVVLQSSTVGVEGTQRIAAL AAEHGVRLVDAPVLGTRGPAEQGLLVHLVSGSEDDIAVARPVLEATGSRTVVAGSTAG PGSALKLACNAWIASITAATGQSLGLARLLGVEPRLFLDAIAGGAADTPYAHLKGGAM LSGELAPSFALDGLLKDVTLMLAALDGADAHDFDTAMLEALRETYAEASAAGHGGDDV AAVGTVFGLPASSDS" gene 266409..266963 /gene="pyrE" /locus_tag="CMS_0233" /old_locus_tag="CMS0233" /db_xref="GeneID:6156219" CDS 266409..266963 /gene="pyrE" /locus_tag="CMS_0233" /old_locus_tag="CMS0233" /EC_number="2.4.2.10" /note="involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; putative uridine 5'-monophosphate synthase" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="YP_001709019.1" /db_xref="GI:170780687" /db_xref="GeneID:6156219" /translation="MTTSDARQQLIDHIKRDAVFHGDFTLTSGKKASYYVDLRRVSLD HRVAPLIGQVMLDLIADVPDVAAVGGLTMGADPIAAAILHQGAAVGRGYDAFVVRKEP KDHGRGRQVEGPDLAGKRVIVVEDTSTTGGSPLKAIEALEKVGAEIAAVAVVVDRSTD AREVIEAAGHRYLYAIGLEDLGLA" misc_feature 266517..266900 /gene="pyrE" /locus_tag="CMS_0233" /old_locus_tag="CMS0233" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 1.1e-22" gene 266963..269104 /locus_tag="CMS_0234" /old_locus_tag="CMS0234" /db_xref="GeneID:6158910" CDS 266963..269104 /locus_tag="CMS_0234" /old_locus_tag="CMS0234" /codon_start=1 /transl_table=11 /product="putative large membrane associated protein" /protein_id="YP_001709020.1" /db_xref="GI:170780688" /db_xref="GeneID:6158910" /translation="MDAAPGGSGGSGSGRDDDDPFAIRPATDADRERPAQPLAPIGWG RSAAREPVPADRDAPNARDAADSDAGVDPAPDDASPPAVGDILAGIVPLDPTEDDERI APLDRVDPDPSTVDPASEPDAPAPEPGIAAAPVDAGDVEFPGEPDPGYVPAPAADGAD AMPTGEVLSGEVEADPAPADDAPAELVLEPVDDGPDDVALPAMPSDATVVDAELVEDP ADQAEADGGDPDGSVQLTPLRDERTDEDADVVDDPAGPAAHEVVPERFDAGDVDGNAS ADADADAERDDEDAAPAPLAPAAAAARAAAMAWASGSAPAAAAPAPAPTAPASAAPAA AAEVPETAPTAERPETASGSGTPSEPQAEGENAAETETAVLSSVVAASDADRVPEEDA EPRDDAVPSDADAHPATARITSPSPSPSDEPEPEDAIALLFGDPAADSADSAAAPHAD RDAPTVAVPAAASSRSEPDPEPRPDPVPRPLPVPPPYAAPLAPRAPAPRAPVLDTARV AAPPAAAPPRAPRGPRRTGLWVGGAILLVLLLVGLFYLGQRLGSGAAPDPAPVATTTP EASPTPSPTPTDPVQGPAAAGTQAWDALLGGECIDPYSTPWEEEFTVVDCGSEHHAQM VARVALPQTGDAFPGEEAVRDSADQLCIADTVIDYAAARAYSDVQYQSAYPITQEEWA AGDRDAYCFVTRAGGGTFTGSIGVPQPPVVP" misc_feature 268544..268603 /locus_tag="CMS_0234" /old_locus_tag="CMS0234" /note="1 probable transmembrane helix predicted for CMS0234 by TMHMM2.0 at aa 528-547" gene 269229..270539 /locus_tag="CMS_0235" /old_locus_tag="CMS0235" /db_xref="GeneID:6156220" CDS 269229..270539 /locus_tag="CMS_0235" /old_locus_tag="CMS0235" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001709021.1" /db_xref="GI:170780689" /db_xref="GeneID:6156220" /translation="MPADPGDGERMASRVRPGDRAFLLLWGAQAVSSLGASAASFALT LQVFAETGSALALSALTVVATVASIYCAPLTGWAADRIGHRRAALASNAVLATASVGM AAVSAAGPGRLLAIVYPLTFLSALASSTLALTLTASVRRMRQEADLTRINGITSLLQD GPTLLAPVLGAALSATVAPSAVFLVDAATSLGCVAALLVVRWDAPPDRRIRNPFRGAR DGIAWILRHPGPRRLQLGFGALNLANGIAASATTAYVLLLGAGGIGSGASLAAFSIAG SAGLLAGAALVAARGDRIPRLAAIAGAALVLGLVGRVALASTALLGVWIAAAVVRNVV LQVQGAPLTAVWQERTPPERQGAILGAKKLLGQGFYPPAVLLGGALTVALHPLGQETA LRVVVIAGGLGEALVGLAMLRSHGIRALLARPTAPAADPASAGG" misc_feature order(269289..269357,269385..269453,269487..269555, 269565..269633,269931..269999,270027..270095, 270132..270200,270333..270392,270411..270479) /locus_tag="CMS_0235" /old_locus_tag="CMS0235" /note="9 probable transmembrane helices predicted for CMS0235 by TMHMM2.0 at aa 21-43, 53-75, 87-109, 113-135,235-257, 267-289, 302-324, 369-388 and 395-417" misc_feature 269301..270374 /locus_tag="CMS_0235" /old_locus_tag="CMS0235" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 270536..271753 /locus_tag="CMS_0236" /old_locus_tag="CMS0236" /db_xref="GeneID:6156221" CDS 270536..271753 /locus_tag="CMS_0236" /old_locus_tag="CMS0236" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001709022.1" /db_xref="GI:170780690" /db_xref="GeneID:6156221" /translation="MSRAGSDPLGRRFRALQAARTISAAGNGFGRVALAFAVLGIPGA GPAEVSLVLACQTLPQLLLILVGGVVADRVSRSRLMVAAEVAATAAWVGLALVSGLGV PSIPALAVLAAVAGIATAMFTPAMSGVVPQLVRPDQLQRANATFRVGQNAALLLGLGL SGVVVAELGATAALVVNAASFGVSGLLIAGIRVPDPDRPPSRVLADLRRGVREFAARQ WLWVTTARFSVVVAALNATVGVLGPLVAIRSYGGPAAWSVIVASQAVGTIGGATLAAR IRVARPIRTAVLATLALAVPMLLLACAAPVWLRCAGMIVAGVAIDVFGVLWSTTLQQR VPEDVLSRVSAFDSFGSLSLALLGLLVAGPIAAATGTGAALLACAGLVVAATLAALIS PEVRRLRSGPRAT" misc_feature 270593..271636 /locus_tag="CMS_0236" /old_locus_tag="CMS0236" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature order(270596..270664,270674..270742,270776..270844, 270857..270925,270962..271030,271040..271108, 271208..271276,271289..271357,271391..271459, 271469..271528,271562..271630,271640..271708) /locus_tag="CMS_0236" /old_locus_tag="CMS0236" /note="12 probable transmembrane helices predicted for CMS0236 by TMHMM2.0 at aa 21-43, 47-69, 81-103, 108-130,143-165, 169-191, 225-247, 252-274, 286-308, 312-331,343-365 and 369-391" gene 271826..272323 /locus_tag="CMS_0237" /old_locus_tag="CMS0237" /db_xref="GeneID:6156222" CDS 271826..272323 /locus_tag="CMS_0237" /old_locus_tag="CMS0237" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709023.1" /db_xref="GI:170780691" /db_xref="GeneID:6156222" /translation="MHRLGRPSVSGEMLAPSACRLRGKKVMSRKEITRWVLLTAIVGP ACVFASLLFPPFLVLGVAVSAAGGLGLAIGYSRLTGRWSWAVSVSAAVVVFVASAAVC FAFWGQAFNLTDQNAPVPVALEAGIAASGALIVLSFVAFAVIVASVASRANRRVGQNV GSARA" sig_peptide 271826..272017 /locus_tag="CMS_0237" /old_locus_tag="CMS0237" /note="Signal peptide predicted for CMS0237 by SignalP 2.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.806 between residues 64 and 65" misc_feature order(271928..271981,271991..272059,272078..272146, 272204..272272) /locus_tag="CMS_0237" /old_locus_tag="CMS0237" /note="4 probable transmembrane helices predicted for CMS0237 by TMHMM2.0 at aa 35-52, 56-78, 85-107 and 127-149" gene 272381..273418 /locus_tag="CMS_0238" /old_locus_tag="CMS0238" /db_xref="GeneID:6156223" CDS 272381..273418 /locus_tag="CMS_0238" /old_locus_tag="CMS0238" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709024.1" /db_xref="GI:170780692" /db_xref="GeneID:6156223" /translation="MVRIYSEVEHHLYASRPLAAVGALGLVALVMINPAGASASDRGT VANVIRSASPEFMTTVADRSNEAPGETNFALNAWGVTARVPQDANKEVRIGAPGKAAI GVSLPSASSARLVASGSSAVTAFDNGDGSTSAVLPQEDGAVQFATIISDSQAPDEYTY SLDIPAKSHLAFNGESGSVSILDSHGLWIAGVAAPWAKDATGASVPTHFKISGDQLTQ VVQHEGEGVKYPVVADPWLGVSLIDSVVWTAGDEWGPTAQIYPTSAGRDTIFAPKIAN EAAWGEALEKTDRSRLDHNNLHDQFTCHWQVVRYDDPGKSSWNLDSARPDVGLAETIA ARCNPGGGSED" sig_peptide 272381..272491 /locus_tag="CMS_0238" /old_locus_tag="CMS0238" /note="Signal peptide predicted for CMS0238 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.726 between residues 37 and 38" misc_feature 272414..272482 /locus_tag="CMS_0238" /old_locus_tag="CMS0238" /note="1 probable transmembrane helix predicted for CMS0238 by TMHMM2.0 at aa 12-34" gene complement(273490..274287) /locus_tag="CMS_0239" /old_locus_tag="CMS0239" /db_xref="GeneID:6156224" CDS complement(273490..274287) /locus_tag="CMS_0239" /old_locus_tag="CMS0239" /codon_start=1 /transl_table=11 /product="putative N-acetylglucosamine-6-phosphate deacetylase" /protein_id="YP_001709025.1" /db_xref="GI:170780693" /db_xref="GeneID:6156224" /translation="MARRDEMDCWLTDMDGVLVHENQALPGAAALIQQWQDQGKPFLV LTNNSIFTPRDLSARLRASGLHVPESAIWTSALATAAFLEQQMPGGSAFVIGEAGLTT ALHEAGFIMTDTKPDYVVIGETRNYSFEAITRAIRLINGGARYIATNPDATGPSAEGV LPATGAVLALISKATGKEPYIVGKPNPMMFRSALNKIGAHSESTGMIGDRMDTDIIAG IEAGLHTVLVLTGISDRAEIERYPFRPDEVLSGVMELLDPEPVESEL" misc_feature complement(273595..274269) /locus_tag="CMS_0239" /old_locus_tag="CMS0239" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 4.6e-09" gene 274417..275322 /locus_tag="CMS_0240" /old_locus_tag="CMS0240" /db_xref="GeneID:6156225" CDS 274417..275322 /locus_tag="CMS_0240" /old_locus_tag="CMS0240" /codon_start=1 /transl_table=11 /product="putative phosphoesterase" /protein_id="YP_001709026.1" /db_xref="GI:170780694" /db_xref="GeneID:6156225" /translation="MHALAPGSLRLVHLSDTHLLRDGGLHQGVVDTGAALDRVLVEAD RVPHVRLLVGSGDLSEDGTPESYALLREQLVPWTSSRGAALVLTPGNHDVRSGFRLVL GDGHGGPGTDDGQDPAVVPPIDGVTIVDGWRIATLDTSVPGKGYGALREQQLDGLREL LATPAERGTVLVLHHPPVPAPTVLHESLALQDPERLAEIVRGSDVRVILSGHYHHHIV GSLAGVPVLVAPGVANETDVAADPGTERIVRGSGFLVVDVDPAGVVTSVVVRAHAEDD GDEVALLDAELVQRIMAESGAPAAP" misc_feature 274441..275064 /locus_tag="CMS_0240" /old_locus_tag="CMS0240" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 1.2e-15" gene complement(275386..275556) /locus_tag="CMS_0241" /old_locus_tag="CMS0241" /db_xref="GeneID:6156226" CDS complement(275386..275556) /locus_tag="CMS_0241" /old_locus_tag="CMS0241" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709027.1" /db_xref="GI:170780695" /db_xref="GeneID:6156226" /translation="MGLDDKIKNAAQDIAGKAKEALGEHKGDERLKAEGQKDQTAASA KKAGEDVKDVFK" misc_feature complement(275389..275544) /locus_tag="CMS_0241" /old_locus_tag="CMS0241" /inference="protein motif:HMMPfam:PF05532" /note="HMMPfam hit to PF05532, CsbD-like, score 3.5e-06" gene 275741..276160 /locus_tag="CMS_0242" /old_locus_tag="CMS0242" /db_xref="GeneID:6156227" CDS 275741..276160 /locus_tag="CMS_0242" /old_locus_tag="CMS0242" /note="Contains possible coiled-coil region." /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709028.1" /db_xref="GI:170780696" /db_xref="GeneID:6156227" /translation="MILFGLLPLLVAVCALVDLITRPDDRVKHLPKLVWILLIVFLPL IGSIVWFCVGHDWDARREPVGPPDRSAAYERAAAAVDRRVRSTEQQLADLEEEERHYA ALARMKQLQAEQAVQAARAAGPARAPRAIEPGSTPER" misc_feature order(275744..275803,275831..275899) /locus_tag="CMS_0242" /old_locus_tag="CMS0242" /note="2 probable transmembrane helices predicted for CMS0242 by TMHMM2.0 at aa 2-21 and 31-53" gene 276249..278438 /locus_tag="CMS_0243" /old_locus_tag="CMS0243" /db_xref="GeneID:6156228" CDS 276249..278438 /locus_tag="CMS_0243" /old_locus_tag="CMS0243" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase" /protein_id="YP_001709029.1" /db_xref="GI:170780697" /db_xref="GeneID:6156228" /translation="MPDTATPPSSAATSSAPTSDLRSAAREHLSRLVGVAGADFHDGQ FEAFEALVQDRSRALVVQRTGWGKSAVYFVATLLLRQQGLGPTLLVSPLLALMRDQVA AGRRVGVRAVAMNSSNAHEWDDLLRALDADEVDLLLVSPERLNNPRFRDEQLPALRAR LGLLVVDEAHCISDWGHDFRPDYRRLRDLISSVDERVPVLATTATANSRVVADVEEQL SVGSAGAGVVETERVPVVTIRGPLARRSLRLGVLRLENSRDRLGWLLSHLDELPGSGI IYALTVSAAQDTARLLRDAGHAVKAYTGRDDPADREQAEGELQRNEVKALVATSALGM GFDKPDLGFVVHLGAPSSPVSYYQQVGRAGRGSADADVLLLPGREDPDIWQYFATASM PDEQQAAAVIQALGESDRPLSVPALESRVSLSRSRLDLLLKVLDVDGAVRRDTSGWSA TGVPWVYDRARCEQVAAARVREQQAMLDYETTLGCRMEFLQRQLDDDTAAPCGRCDRC AGAWYPASLDQQASATASQALDRVGLPIEPRLRWPTGASSVGVPLSGAIAAGEQVDEG RALARLTDLGWGGRLRTVFASGAEDAPVDDALVAACVRVLAEWGWAERPRAVVHVPSA GRPQLVASLAQRIAEVGRLPFLGSLELVDPGAPGAARGNSVYRLGRVHPRFAVPAHLA DDLAADPRPVLLVDDLVDTRWTLTVAGRLLRKAGATRVLPFALAQQG" misc_feature 276366..276890 /locus_tag="CMS_0243" /old_locus_tag="CMS0243" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 3.5e-25" misc_feature 276732..276761 /locus_tag="CMS_0243" /old_locus_tag="CMS0243" /note="PS00690 DEAH-box subfamily ATP-dependent helicases signature." misc_feature 277119..277349 /locus_tag="CMS_0243" /old_locus_tag="CMS0243" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 3.8e-20" gene complement(278454..279458) /locus_tag="CMS_0244" /old_locus_tag="CMS0244" /db_xref="GeneID:6156229" CDS complement(278454..279458) /locus_tag="CMS_0244" /old_locus_tag="CMS0244" /codon_start=1 /transl_table=11 /product="putative DNA methylase" /protein_id="YP_001709030.1" /db_xref="GI:170780698" /db_xref="GeneID:6156229" /translation="MIHAENLQAVRALPDGAFQLIYLDPPFNTGRTQERQNLTVTRTP DPDPAADADPAADPAADADPNTDPAVDADPDAAPDTAPPALAPASTATPEPARPPGAR LGFHGRSYNSVKGMLYGFDDSFADYWDFLEPRLIEAWRLLDPTGTLYLHLDYREVHYA KVVLDALFGRRSFLNEIVWAYDYGAKSRRRWPAKHDTILVYVKDPLRYRFDSEGVDRE PYMAPGLVTPEKRERGKLPTDVWWHTIVSPTGREKTGYATQKPLGVLRRIVQASSRPG DWVLDFFAGSGTTGAAARELGRRFVLVDENPQAVEVMRARLTGGGTVFVGQDEDPPVG" misc_feature complement(278508..279047) /locus_tag="CMS_0244" /old_locus_tag="CMS0244" /inference="protein motif:HMMPfam:PF01555" /note="HMMPfam hit to PF01555, DNA methylase N-4/N-6,score 3.2e-34" misc_feature complement(279378..279398) /locus_tag="CMS_0244" /old_locus_tag="CMS0244" /note="PS00092 N-6 Adenine-specific DNA methylases signature." gene 279634..280878 /locus_tag="CMS_0245" /old_locus_tag="CMS0245" /db_xref="GeneID:6156230" CDS 279634..280878 /locus_tag="CMS_0245" /old_locus_tag="CMS0245" /note="Includes proline-rich N-terminal region which may not be real" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709031.1" /db_xref="GI:170780699" /db_xref="GeneID:6156230" /translation="MSDDRDPDRTDGPHPDEPRGEGPGHGEAGEAGSAAADPVSPYGP AAPAGAPASAPATPTPTDGTDARTTADAPPMPAAHPAPPAPPAGRSASGDAAAAYDPA DPTGAGAAAGAAAPGPGYAPSGPGPGSAPSGPGYAPPAAPPYVSGQPPRPRGGKGLAI AALVVGIAGFVGAFIPVLNYVTAVPALVAVVLAIVSLARRTDGKPLALAGLILGVVGF VLSIVLALVYTFAFVSSVSDAIETADPGSGFASPEPTSGDDDATALPGTSPDDPLPIG TPVTGDGIDGPEWQVTLGTPILDATAAVLAAEEGNPPPADGMQYAVVPVTATYLGTTE GDPLSELAVGFLAADGSQYSAADSFALAPAPAFTDNEELLEPQGTATGNVVIEIPIDG AADGLWATAPGMIADAYYFRAG" misc_feature order(280105..280164,280174..280227,280264..280332) /locus_tag="CMS_0245" /old_locus_tag="CMS0245" /note="3 probable transmembrane helices predicted for CMS0245 by TMHMM2.0 at aa 158-177, 181-198 and 211-233" gene 281031..281936 /locus_tag="CMS_0246" /old_locus_tag="CMS0246" /db_xref="GeneID:6156231" CDS 281031..281936 /locus_tag="CMS_0246" /old_locus_tag="CMS0246" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709032.1" /db_xref="GI:170780700" /db_xref="GeneID:6156231" /translation="MPMTDARDPNSTPEQHSYPAPPPAPEGGYATPYAPAAPAGPSGG KGLAIASLIVSIVAFLGAFIPFLNYVVFIPAIVAIVLAIVALARHKAGKPLALAGLIV GVLALVLSVILAVVYTVGFAAAVSESLPRSEGGSRSSAAPLDETEEEAGPAVGTRENP APIGTVVTGLSGGSPEWEVTLGAPVLDANAAVTSENMFNDPAPAGTQYAMVPVTVKYV GTESASPMFEIGVEYVSAAGTTHTTSDSFAVAPEPQFDSINELFPGASGTGNVVIAIP TADAAAGTWAVRPGILADPYYFAAQ" misc_feature order(281169..281222,281226..281285,281313..281381) /locus_tag="CMS_0246" /old_locus_tag="CMS0246" /note="3 probable transmembrane helices predicted for CMS0246 by TMHMM2.0 at aa 47-64, 66-85 and 95-117" gene 282015..283247 /locus_tag="CMS_0247" /old_locus_tag="CMS0247" /db_xref="GeneID:6156232" CDS 282015..283247 /locus_tag="CMS_0247" /old_locus_tag="CMS0247" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709033.1" /db_xref="GI:170780701" /db_xref="GeneID:6156232" /translation="MTPDAPATRPIPPAAELDARDPLARFRDLFVEADDVVAYLDGNS LGRPTRASVDRVASFVRDQWGGRLIRGWDEDWLAMPTRIGDDLGRVTLGAAAGQTFIG DSTTVILYKLVRAAVRARPGRDELVIDTDNFPTDRFVLEGVAEECGMTIRWIEVAPDA GVTPDLVAEAVGERTALVVLSQVAYRSGFLADVPGITHIVHDAGALVLWDTCHSVGVV PTELDAWGVDLAVGCSYKYLDGGPGAPAHGYVRRDLQQELRQPIQGWMGARDVFAMGP VYEPADGIRRFLSGTPPIVGMLAMQDMIALIEEAGMPAIRAKSLALTGFALDLVERDL VPLGARVASPRDEDRRGSHVSVDHPRFRDIVGALWEEGVIPDFRAPSGLRLGLSPLTT SFREVEVGVEAIRRHLAG" gene complement(283284..284378) /locus_tag="CMS_0248" /old_locus_tag="CMS0248" /db_xref="GeneID:6156233" CDS complement(283284..284378) /locus_tag="CMS_0248" /old_locus_tag="CMS0248" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709034.1" /db_xref="GI:170780702" /db_xref="GeneID:6156233" /translation="MPRPATTPPQIRFGIVGSGWRSAFFLRIARALPERFAVSGLVTR SADTGRALEEEWGIRTFRTAAELLAAEAPSFVVVSVPRTAAPDVIADLVDRGVAVLTE TPPGETVADLERLDALVKQGARIEVAEQYPLSPLLAAQLAIAAGGRLGRISQATVAQC HDYHGVRVMRRALGIGFEDATITAQRFSSPLVAGPDRDGDPVREEVVTAVQTTARFDF GDRLGVYDFADRQYFSWIRRNRLLVRGERGEIVDEHVSWLLDATTPTWADITRIETGQ GGNLEGHHLRGLLLGSEWVYENPFAPGRLADDEIAVAQCLVEMHAHAAGGPSTNSLAE ASQDHHLALLMHEAATTGQPVRSTRRAWAD" misc_feature complement(283986..284348) /locus_tag="CMS_0248" /old_locus_tag="CMS0248" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 4.3e-13" gene 284562..286817 /locus_tag="CMS_0249" /old_locus_tag="CMS0249" /db_xref="GeneID:6156234" CDS 284562..286817 /locus_tag="CMS_0249" /old_locus_tag="CMS0249" /note="C-terminal region similar to sugar synthases eg. UniProt:SUSY_BETVU (EMBL:BVSSMRNA) Beta vulgaris (Sugar beet) Sucrose synthase" /codon_start=1 /transl_table=11 /product="glycerol transferase" /protein_id="YP_001709035.1" /db_xref="GI:170780703" /db_xref="GeneID:6156234" /translation="MGIQTSLDQVAQAARILDVMQEADELTVAASRDGGGRAVRLLAR AAADPADQLTAVAAIHALAQVFDEAADHALVALLDHDTRWIREHAAWAFGTRLPRFDA VSGLVAMVVEGGFPGMLAQRTLQQWAASTPEHVALALENALLGVQGDDARSRLVETVG LVPGRIPERVLLRIAPAVAEGPLTRSAAVAALGDRPAGEAIAALVADIARGDDEVAAV ARLAVLDIARRDGDRGSRVAPPARPGLTVVQLFLHADIDAGLTHVGAGDNGGIATLLV RLGDALVDPAAAAGAHPDAARIAASGDPLAAADRPVDRVITLSRGTPDQALGSLARVA AGDDGHVFAHIPMLGGPRSLPEAWPHRVEAERGIRRVLRAAGRVDAVHLRMADVGTLA ASTVARELGIPVVFTVAPDPYGVVDALDRSGALTRDRFGGVDEREHYWFRVRLVQRLA ADAAHTVLFPRPELKRDMRRLVGIDVDAHPERHSVVAEGIDVAAIERSRDDAMLGADA DGAPARAFVELDDLLRDLPEERRGLPLVISVGRLARVKGMAQLAHVWAADPPLRSRAN LLIVGGDLDEPTQEEREQLARILDAVPGADGPADAARHGLLLAGHRGNDTVTRWLAAV RYGRPGLTAPGGAYACASIKEEFGVALLEAMSMGLPVVAPASGGPATYVEDGVTGLLV DTTDAAALGTGIARALDIAAGPGAVAAADRARDMVARTFTIQAMAGTLSRVYRDVAAA DDRTLWELSAS" misc_feature 286119..286709 /locus_tag="CMS_0249" /old_locus_tag="CMS0249" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 2.1e-11" gene 286814..288139 /locus_tag="CMS_0250" /old_locus_tag="CMS0250" /db_xref="GeneID:6156235" CDS 286814..288139 /locus_tag="CMS_0250" /old_locus_tag="CMS0250" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709036.1" /db_xref="GI:170780704" /db_xref="GeneID:6156235" /translation="MTLLVISPDYASHLFPLITLASAWQQAGERVVVATGSATAGIVE ASGFERIDLCLGRGSNPGTIKAEEQPTGEDDTLRGFFAATRRGMVETLRFQAEARSDD LLWEPVETARAVQRILDEVRPDQVIVDHLAFSARLALLASGTRHADVVLGHPSALPVG DEVYGFPPAWPAAFEPEEEDLEELHALCVRVRDRFTAQWNDALAILAPSMRPSRDAFA EAGDVLLLNYPEELHDLDRSELLPPHAFIGSAVRREAPEAEVQGWIDAGGDPIVYVSL GSFLSVRGDVLARIAAALRDLDVRVALATGSTDPAELGDIPSDWLVRPFLPQVTLLGH ADLAVTHGGNNSVTEAATAGVPMLVLPLSTDQFAGAAALEDAGLGIALAPNVATVTEL RQAAKALLNPSGMQRAGLDAIAASLTRSPGPQRAYQALAGGIRPEQAAR" misc_feature 286814..288127 /locus_tag="CMS_0250" /old_locus_tag="CMS0250" /inference="protein motif:HMMPfam:PF00201" /note="HMMPfam hit to PF00201,UDP-glucuronosyl/UDP-glucosyltransferase, score 1.4e-07" misc_feature 287786..287911 /locus_tag="CMS_0250" /old_locus_tag="CMS0250" /note="PS00375 UDP-glycosyltransferases signature." gene 288281..288454 /locus_tag="CMS_0251" /old_locus_tag="CMS0251" /db_xref="GeneID:6156236" CDS 288281..288454 /locus_tag="CMS_0251" /old_locus_tag="CMS0251" /codon_start=1 /transl_table=11 /product="putative small membrane protein" /protein_id="YP_001709037.1" /db_xref="GI:170780705" /db_xref="GeneID:6156236" /translation="MNIVAFIIAFALFLGGMALFAFAFYIEGFELLSFFAGILLVSAS IAIPAHILKRTDA" sig_peptide 288281..288418 /locus_tag="CMS_0251" /old_locus_tag="CMS0251" /note="Signal peptide predicted for CMS0251 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.410 between residues 46 and 47" misc_feature order(288290..288358,288371..288436) /locus_tag="CMS_0251" /old_locus_tag="CMS0251" /note="2 probable transmembrane helices predicted for CMS0251 by TMHMM2.0 at aa 4-26 and 31-52" gene 288525..290225 /locus_tag="CMS_0252" /old_locus_tag="CMS0252" /db_xref="GeneID:6156237" CDS 288525..290225 /locus_tag="CMS_0252" /old_locus_tag="CMS0252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709038.1" /db_xref="GI:170780706" /db_xref="GeneID:6156237" /translation="MGDLFEGYGTLAAARRASGGAMPFDEMFRDPPVAGEPAVARAAY REIHAALSRMTKEELKDRTDALATSYLAQGVTFDFAGEERPFPLDAVPRVIEQAEWSR LEKGVAQRVRALEAFLADVYGPQRAIRDGVIPARLISSSSHFHRQAAGIDPANGVRIQ VSGIDLVRDEAGEMRVLEDNVRVPSGVSYVISNRRVMAQTLPELFVSMRVRPVGDYPN KLLQALRASAPDGVEDPNVVVLTPGVYNSAYFEHTLLARLMGVELVEGRDLFCSGGRV WMRTTGGPMRVDVIYRRVDDEFLDPLQFRADSMLGSPGLMLAARLGNVTIANAVGNGV ADDKLVYTYLPDLIRYYLAEDAIIPNVDTWRLEEPDSLEEVLDRLPELVVKPVDGSGG KGLVVGPAASAGELAELRARLLKDPRGWIAQPVVQLSTIPTLVEDGMRPRHADLRPFA VNDGRDIWVLPGGLTRVALPEGQLVVNSSQGGGSKDTWVVGGSGFPAATRERSVQTLV ADQAAVTTSIPIVSGEKAPDQSPHDRPRNRDQHEQQQQAAAPAAASTADDADTTEGDR" misc_feature 288579..289490 /locus_tag="CMS_0252" /old_locus_tag="CMS0252" /inference="protein motif:HMMPfam:PF04169" /note="HMMPfam hit to PF04169, Protein of unknown function DUF404, score 2.5e-159" misc_feature 289563..289997 /locus_tag="CMS_0252" /old_locus_tag="CMS0252" /inference="protein motif:HMMPfam:PF04174" /note="HMMPfam hit to PF04174, Protein of unknown function DUF407, score 2.3e-80" gene 290225..291160 /locus_tag="CMS_0253" /old_locus_tag="CMS0253" /db_xref="GeneID:6156238" CDS 290225..291160 /locus_tag="CMS_0253" /old_locus_tag="CMS0253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709039.1" /db_xref="GI:170780707" /db_xref="GeneID:6156238" /translation="MPMLSRIAESLFWIGRYIERSDGTARILDVHLQLLLEDPWIDED TACRSLLSVMGSDVPSEDVLGRDDVLALLAVDRTQPASIAYSLGAARENARRAREIVS SELWECLNTTRARMPRKIANDRVHEFFGWVRERSALAVGLVESGTSRDEAWQFFTLGR SIERADMTARLLATRALTEASGPSWTTILRSCGAYEAYLRTYRGVPSARNAAEFLLLD RLFPRSITHSIRRAEQCLHDIEPRTDRLGVSDQAQRLLGQIRSELEYRPIQEILDDLP RFMDAVQEATSATSEAVRQRYFPTNAAPSWVGENS" misc_feature 290231..291124 /locus_tag="CMS_0253" /old_locus_tag="CMS0253" /inference="protein motif:HMMPfam:PF04168" /note="HMMPfam hit to PF04168, Bacterial protein of unknown function DUF403, score 2.2e-91" gene 291157..292002 /locus_tag="CMS_0254" /old_locus_tag="CMS0254" /db_xref="GeneID:6156239" CDS 291157..292002 /locus_tag="CMS_0254" /old_locus_tag="CMS0254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709040.1" /db_xref="GI:170780708" /db_xref="GeneID:6156239" /translation="MNRLRITHRTGFHYEGEVTASYNEARMLPVSSENQFVLYSNLDI QPKPGHHTYVDYFGTRVSSFEILSPHRSLELTATSLVEVRPRTHEPHQLGWDDLAVDV QRATEHVEQVAQTVRTEPHEEVRALAEEIAGGAGTPCEAAAEIARAIGERVEYMAGVT SVQSTAREAWEQGRGVCQDITHIVIGALRHVGIPARYVSGYLHPKPNAAVGETVTGES HAWVEWFCGEWRGWDPTNLIDIGDRHVLVGRGRDYRDVAPLRGIYAGPFRSKLFVRVE ITRES" misc_feature 291670..291861 /locus_tag="CMS_0254" /old_locus_tag="CMS0254" /inference="protein motif:HMMPfam:PF01841" /note="HMMPfam hit to PF01841, Transglutaminase-like,score 2.6e-13" gene 292047..292859 /locus_tag="CMS_0255" /old_locus_tag="CMS0255" /pseudo /db_xref="GeneID:6156240" gene 292856..293359 /locus_tag="CMS_0256" /old_locus_tag="CMS0256" /db_xref="GeneID:6156241" CDS 292856..293359 /locus_tag="CMS_0256" /old_locus_tag="CMS0256" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001709041.1" /db_xref="GI:170780709" /db_xref="GeneID:6156241" /translation="MTGAGSGGVALRPARADDLPFLEDMLLASMDWRDDGSMTRERML ATPELAHYVSGWPRAGDVGVVAEADGRPVGAAWARLYADDDRGYGFVATDIPELGMAL VPSARGRGVGRAILVALVEAIRASGAPGVSLSVEDGNDRARALYESLGFVPVGREGGS DVLLLRW" misc_feature 293045..293311 /locus_tag="CMS_0256" /old_locus_tag="CMS0256" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 9e-18" gene complement(293432..294187) /locus_tag="CMS_0257" /old_locus_tag="CMS0257" /db_xref="GeneID:6156242" CDS complement(293432..294187) /locus_tag="CMS_0257" /old_locus_tag="CMS0257" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709042.1" /db_xref="GI:170780710" /db_xref="GeneID:6156242" /translation="MMPIHSITRSTSRTAYRASRSPVRWRSAPFLLTLVAIIAVGLTT TGVTPAHAATHQTAPAAAAISPALAASVRAGTTEADIRSGRITVDQLADAAEVTSGAA RGLSSEARAAEHAQLVRETASEVAELRLARPGQASTSIPVDADAFGHLVAGTTSSIAS DPLVASDSWKSFWHHITHPSITLSISPAAMRLLVAGAGSFDIGALCALTGAVACAFIG AAGSMLITYLMNTPCVYSGMYFVLPYWWNSRCK" sig_peptide complement(293432..293617) /locus_tag="CMS_0257" /old_locus_tag="CMS0257" /note="Signal peptide predicted for CMS0257 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.383 between residues 62 and 63" misc_feature complement(order(293450..293518,293528..293596, 293960..294019,294047..294115)) /locus_tag="CMS_0257" /old_locus_tag="CMS0257" /note="4 probable transmembrane helices predicted for CMS0257 by TMHMM2.0 at aa 25-47, 57-76, 198-220 and 224-246" gene complement(294433..297202) /locus_tag="CMS_0258" /old_locus_tag="CMS0258" /pseudo /db_xref="GeneID:6156243" misc_feature complement(294469..294588) /locus_tag="CMS_0258" /old_locus_tag="CMS0258" /inference="protein motif:HMMPfam:PF00746" /note="HMMPfam hit to PF00746, Surface protein from Gram-positive cocci, anchor region, score 0.0056" /pseudo misc_feature complement(294478..294546) /locus_tag="CMS_0258" /old_locus_tag="CMS0258" /note="1 probable transmembrane helix predicted for CMS0258 by TMHMM2.0 at aa 165-187" /pseudo misc_feature complement(294547..294564) /locus_tag="CMS_0258" /old_locus_tag="CMS0258" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." /pseudo misc_feature complement(297110..297142) /locus_tag="CMS_0258" /old_locus_tag="CMS0258" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." /pseudo gene complement(297199..299115) /locus_tag="CMS_0261" /old_locus_tag="CMS0261" /db_xref="GeneID:6156244" CDS complement(297199..299115) /locus_tag="CMS_0261" /old_locus_tag="CMS0261" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="YP_001709043.1" /db_xref="GI:170780711" /db_xref="GeneID:6156244" /translation="MPPRARRVALGTGAVALMAAAALAASTLAGTGSASAVADPAVAR AASGLRTLNGSAPSWPGGSATRLGDAPADATAAFTVLLDPTRADAAPAVAAWLRDRGL DVGDVRGDVAALPVSGTLARASRAFDTGFARFRVGGREVVAPERTLAVPAALDAVRGV AGTAQGDVLMPSDAEADDAQAAGTQAPDAATPDAATPVPAPIPGQASGGSPASSADDG TCASWWGQRLTDAWPASVDVAHRSDSLCGYGPAQLRRVDDVPAEDRGAGATVAIVAAY DDPDTAADTDTYSRAVGEPAFSAGQYLDHPSASPRTGICGGPTAWTEEQHLDVQAVHA MAPDATVSYWGADDCTSTSLYTRILDAAEEGPDVISLSFGGMEGLDTADDRELLNRVL VEAASRDVSVFASTGNDGDYSGFGDHGGNATVASPASSPYVTAVGATSTGLAEDGSIA VEAGWETETRFARNGALIPPGFAFGAGGGQSAEYARPSWQADRLSVHGTGRLLPDVAS LGDPNTGFVTYGPHKGRTEYATHGGTSLATPMVASMVAISKAVTGRRFGLASPAIYAL MGTGALRDVQPASAATWSPTGPSAGALWPETLFLWDTGRQSLRSGPGWDDVTGAGVPA GRAFVEGLGAEAGR" sig_peptide complement(297199..297306) /locus_tag="CMS_0261" /old_locus_tag="CMS0261" /note="Signal peptide predicted for CMS0261 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.388 between residues 36 and 37" misc_feature complement(297364..298356) /locus_tag="CMS_0261" /old_locus_tag="CMS0261" /inference="protein motif:HMMPfam:PF00082" /note="HMMPfam hit to PF00082, Peptidase S8 and S53,subtilisin, kexin, sedolisin, score 3.5e-05" misc_feature complement(299029..299097) /locus_tag="CMS_0261" /old_locus_tag="CMS0261" /note="1 probable transmembrane helix predicted for CMS0261 by TMHMM2.0 at aa 7-29" gene complement(299400..300089) /locus_tag="CMS_0262" /old_locus_tag="CMS0262" /db_xref="GeneID:6156245" CDS complement(299400..300089) /locus_tag="CMS_0262" /old_locus_tag="CMS0262" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709044.1" /db_xref="GI:170780712" /db_xref="GeneID:6156245" /translation="MSLASPTAPAHFRPSVRLLAAAVTVTAVALFGLGSGDAAQAAPA HLEQSAVASSLLNGTFEHDVKSGKITADQLASVATEGVVVGGQHIQPWVAKGESHAQV ATEIRAELADSAPSHANAVENASIRQALQVQDGHTVTPQKDVPAGITESKWAWSNHEW HIPGYVVKTIITLGVAAYIGTVCITLDLSRLSCIALGVVVGGLGEFIKSWTCGLGYYF DFPKVWKSHCG" sig_peptide complement(299400..299522) /locus_tag="CMS_0262" /old_locus_tag="CMS0262" /note="Signal peptide predicted for CMS0262 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.978 between residues 51 and 52" gene 300329..301054 /locus_tag="CMS_0263" /old_locus_tag="CMS0263" /db_xref="GeneID:6156246" CDS 300329..301054 /locus_tag="CMS_0263" /old_locus_tag="CMS0263" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709045.1" /db_xref="GI:170780713" /db_xref="GeneID:6156246" /translation="MNQRQAAVSRARREIVEAAGAQFATHGYEGTSFSRVAEAMGKPK SAIGYHLFASKERLAGAVVEDQEDRWLRIEAALDRKGVLHELVVFLLTGASTVEVCPV AAGAIRLLQDMPRLGLAVERRFDVWRFTREHLEAELAAQGVRAADLDAVVDVLLSATF GVLSYRSPSAPEGDRLERLRSLWIPLLTHLGLADVDAVVRAAQPLDLALVEEGRADAS EAHVWTGRGDADDASSDRDRARA" misc_feature 300371..300514 /locus_tag="CMS_0263" /old_locus_tag="CMS0263" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2.4e-08" misc_feature 300419..300484 /locus_tag="CMS_0263" /old_locus_tag="CMS0263" /note="Predicted helix-turn-helix motif with score 1308.000, SD 3.64 at aa 31-52, sequence TSFSRVAEAMGKPKSAIGYHLF" gene complement(301122..303383) /locus_tag="CMS_0264" /old_locus_tag="CMS0264" /db_xref="GeneID:6156247" CDS complement(301122..303383) /locus_tag="CMS_0264" /old_locus_tag="CMS0264" /codon_start=1 /transl_table=11 /product="putative phospholipase C" /protein_id="YP_001709046.1" /db_xref="GI:170780714" /db_xref="GeneID:6156247" /translation="MSPHRGIPRPRAAARSRKKDRPVSASKPEEHAPDVDLAAGVDAA PPLDSSRPYRTGIRPGVSRRTVLLGGAAAIMAGVAAGSVVGAPGAATAATAATRRNLT RSIEDVQHVVILMQENRSFDHYFGTLPGVRGFGDKQAVELPGGGTVFAQPDASRPDGG RMLPFPLDSSRFNAQGAGGLDHSWKGGHQAWNKGAWDNWVVAKSEQTMGYFTKDDLPF HHALASAFTIADHYHCSLIGPTTPNRLFQWTGTVDPRGTAGGPAIDNPDDYAPVFSWT TYPERLRQAGVTWKTYANDEVGDEGTHPYVGDYGDNPLWLFHQYHDALASEDPATQQL ALDGGLHDGWKPDSGKGLDVTHLLEEFGKDAAANTLPQVSYVVAPYGWSEHPKASPDY GAHYTNAVIQALMSNPDTWASTVLLINYDENDGYFDHLLPPLAEPGTADEYVDGLPIG YGTRVPLTVVSPWSRGGWVDSQVFDHTSVIRFLETWTGVHEPNISEWRRTISGDLTSC FDFAHPDFSIPSATEVLPMSATQALVAAADADMAKPPVQEPAVGAQRMPEQEVGTVRH RPLPYRQDADVAVDRATGRVTLTMHNSGRQGVSHQVFPDIALPFASTPFTVAPRGKAA CTWDSTAHTGAYDFSPYGPDRFLRRFAGTVVAAGKADVPVPRVSGLGSRVSAETIPGG KPVLRLTLANDGTPSVHCTLTADDFITRERHETVKPGRSTTVNWPVDEWGYYDVVVTD GNGFRYRYAGRVE" misc_feature complement(301425..301691) /locus_tag="CMS_0264" /old_locus_tag="CMS0264" /inference="protein motif:HMMPfam:PF05506" /note="HMMPfam hit to PF05506, Protein of unknown function DUF756, score 2.6e-13" misc_feature complement(301860..303062) /locus_tag="CMS_0264" /old_locus_tag="CMS0264" /inference="protein motif:HMMPfam:PF04185" /note="HMMPfam hit to PF04185, Phosphoesterase, score 4.4e-117" gene complement(303592..304149) /locus_tag="CMS_0265" /old_locus_tag="CMS0265" /db_xref="GeneID:6156248" CDS complement(303592..304149) /locus_tag="CMS_0265" /old_locus_tag="CMS0265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709047.1" /db_xref="GI:170780715" /db_xref="GeneID:6156248" /translation="MQRLDLGQGAWLDIRPGWVSDSDALFERLVEDVEWTADTRLMHG RTVEVPRLLSWYGPGARLPAPVLVEARDALNDHYGRPPGQVLETAGLCFYRTGEDSVA GHGDRVGRTIDRDTMVAIVSVGAARTLSLRPKGGGEVRRFPLGHGDLVVMGGSAQRTH EHAILKTAKAVGPRISIQFRPVWPV" gene complement(304289..304984) /locus_tag="CMS_0266" /old_locus_tag="CMS0266" /db_xref="GeneID:6156249" CDS complement(304289..304969) /locus_tag="CMS_0266" /old_locus_tag="CMS0266" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709048.1" /db_xref="GI:170780716" /db_xref="GeneID:6156249" /translation="MRITWAVVRLLTALTVLVAVTSQYVVSSTYWRSIGVEGIWGKTV DFLMYFTIESNLLAAVVMAVGAVRLLRRTPAPGRGWTTLRLAATTYMVTTGIVYNLLL RGLPTIPGGNLPWSNEVLHVVVPLLVLADWLLASDRRALGYGAVGRVVVFPLVWVAVT LARGPITGNEVTGAATYYPYPFLDPATGGGGYGTVAVWVAVIAAMICALTLLLTWAGR RASRARAA" misc_feature complement(order(304322..304390,304484..304552, 304565..304621,304664..304732,304766..304834, 304892..304951)) /locus_tag="CMS_0266" /old_locus_tag="CMS0266" /note="6 probable transmembrane helices predicted for CMS0266 by TMHMM2.0 at aa 12-31, 51-73, 85-107, 122-140,145-167 and 199-221" gene complement(305035..305997) /locus_tag="CMS_0267" /old_locus_tag="CMS0267" /db_xref="GeneID:6156250" CDS complement(305035..305997) /locus_tag="CMS_0267" /old_locus_tag="CMS0267" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709049.1" /db_xref="GI:170780717" /db_xref="GeneID:6156250" /translation="MTHANAPFTPVGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature complement(305059..305601) /locus_tag="CMS_0267" /old_locus_tag="CMS0267" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2e-41" misc_feature complement(305860..305925) /locus_tag="CMS_0267" /old_locus_tag="CMS0267" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(306138..306788) /locus_tag="CMS_0268" /old_locus_tag="CMS0268" /db_xref="GeneID:6156251" CDS complement(306138..306788) /locus_tag="CMS_0268" /old_locus_tag="CMS0268" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709050.1" /db_xref="GI:170780718" /db_xref="GeneID:6156251" /translation="MSPGGPSHVHVAGDVEIRKASVGSMDNDAYLLTDLDSGERLLVD AASDVDRLLALVAEPDPVGRLAVVVTTHGHADHHGALAAVLDATDAASAVGDADAGDL PVDADRRLAHGDQVAFGSVALEVVALRGHTPGSVALVLQPGDGSTHLFTGDSLFPGGV GNTQGDAGRFRQLMDDVEERLFARFPDDAHVHPGHGDSTTLGAERASLADWRSRGW" misc_feature complement(306204..306713) /locus_tag="CMS_0268" /old_locus_tag="CMS0268" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 6.9e-18" gene 307113..310601 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /db_xref="GeneID:6156252" CDS 307113..310601 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /note="DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta" /protein_id="YP_001709051.1" /db_xref="GI:170780719" /db_xref="GeneID:6156252" /translation="MAAARNATPTPQNGRDASRLSFAKITDTLTVPDLLALQTESFDW LVGSDAWKRRVEEGTKQGRTDLALNSGLEEIFEEISPIEDLGETMQLGFTNPYLEEQK YSIDECKERGKTYSAPLYVEAEFMNHLTGEIKTQTVFMGDFPLMTEKGTFIINGTERV VVSQLVRSPGVYFERQQEKTSDKDIYSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQ SVTVFLKALGLTSEQILEEFKGVASIELTLEKDSILTKEEALKDIYRKLRPGEQVAAE AARALLDNFYFNPKRYDLAKVGRYKINRKLGIDKQLTDSVLTVEDILATIKYLVSLHA NETKMNGTRDGKPVELRLDVDDIDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMT TQDIEAITPQTLINVRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGL SRERAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASFARINSFGFIETPYRRVVD GVVTDQIDYLTASEEDEFLVAQANAPLTKDFRFAEDRVLVRPKGGEVELVAKENVHYM DVSPRQMVSVATSLIPFLEHDDANRALMGANMQRQAVPLLRSESPLVGTGMEGYAAID AGDVLTADASGVVAEVSAEVVTIQLDEGGTQTYYLRKFDRSNQGTSYNHRVLVSAGDR IEAGEVIADGPATENGELALGKNLLVAFMPWEGHNFEDAIILSQNLVKDDTLSSIHIE EYEVDARDTKLGKEEITRDLPNVSPELLADLDERGIIRIGAEVRPGDILVGKVTPKGE TELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIGVKVFDSQDGDDELGSGVNQR VVVFIAQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLADGTPVDVILNPLGIPGRM NFGQVLETHLGWSAKQGWEVEGKPKWAERLPDHARQAPAGTKVATPVFDGALEEEIAG LLDSTTVTRDGDRLIGSSGKTRLFDGRSGEPFPEPVSVGYMYILKLHHLVDDKIHARS TGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDILGRVKVY EAIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGQAVSLRDTDDEVFRAAEEL GINISTRFESSSIDDI" misc_feature 307209..308375 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /inference="protein motif:HMMPfam:PF04563" /note="HMMPfam hit to PF04563, RNA polymerase beta subunit, score 1.2e-10" misc_feature 307611..308165 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /inference="protein motif:HMMPfam:PF04561" /note="HMMPfam hit to PF04561, RNA polymerase Rpb2, domain 2, score 7.9e-26" misc_feature 308376..308594 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /inference="protein motif:HMMPfam:PF04565" /note="HMMPfam hit to PF04565, RNA polymerase Rpb2, domain 3, score 2.5e-42" misc_feature 308994..310253 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /inference="protein motif:HMMPfam:PF00562" /note="HMMPfam hit to PF00562, RNA polymerase Rpb2, domain 6, score 9.1e-218" misc_feature 309720..309758 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /note="PS01166 RNA polymerases beta chain signature." misc_feature 310257..310487 /gene="rpoB" /locus_tag="CMS_0269" /old_locus_tag="CMS0269" /inference="protein motif:HMMPfam:PF04560" /note="HMMPfam hit to PF04560, RNA polymerase Rpb2, domain 7, score 6.7e-49" gene 310650..314549 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /db_xref="GeneID:6158961" CDS 310650..314549 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /note="DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta'" /protein_id="YP_001709052.1" /db_xref="GI:170780720" /db_xref="GeneID:6158961" /translation="MLDVTTFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKD GLFGEQIFGPSRDWECSCGKYKRVRFKGIVCERCGVEVTKSAVRRERMGHIELAAPVT HIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEDARHEDMPGLENELRLEIK TLQDQRDSQIAERLGRLETDLAALEAEGAKSDQKRRAKDGAEKEMGQTRKAFDEDISR LERVWEEFRSLKVGELKPEDAVFHELQDRFGIYFEAHMGAEAIQKRLEAFDLEAEGEL LREQIATGKGQKKIRAIKRLRVVSSFLATGNSPAAMVLQVVPVIPPELRPMVQLDGGR FATSDLNDLYRRVINRNNRLRRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVT GTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALE LFKPFVIKRLIDLSHAQNIKAAKRMVERSRGQVWDVLEEIIRERPVLLNRAPTLHRLG IQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARILMLASNNIL KPSDGRPVTLPTQDMIIGLHHLTTLKEGVAGEGRAFSSVAEAILAKDQLSLDLNAKVR IRLHDIYFGEGEAPEGVELDEKGKTVGPVLLETTLGRALFNETLPVDYPYIEAVADKG KLSEIVNDLAERYPKVEVAAALDRIKDAGFYWATRSGVTVALSDVLTPPTKAAILSGY EKQAAKVQGQFEKGLTTNAERRQELIEIWNKATAEVAKAMEDNLPADNNINRMVSSGA RGNWMQVRQIAGMRGLVSNPKGEIIPRPIVHSYREGLTVAEYFISTHGARKGLADTAL RTADSGYLTRRLVDVSQDVIIREDDCGTSRGLDLPIATKGADGSSVRDSNVENSVYAR SLAADAVNEAGEVVAPAGSDVGDVMIDHLIAAGVHEIKVRSVLTCESAVGVCAACYGR SLATGKLVDIGEVVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQELFEA RTPKGASPIAEAAGRITIEDTDRSRKVILTPDNGDEPHIYPVLKRATLLVEDGQHVEL GQQLHVGAIDPKEVLRVKGVREVQKHLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKV TVVEHGDTDLLPGELVDRARYNEVNRATLTEGKKTASARQEVMGITKASLATESWLSA ASFQETTRVLTQAAMEGKSDPLMGLKENVIIGKLIPAGTGLAKYRDVTVTATEEAKAE RYPNRIFTDESVFNESDLSFVDFDSFSSDDYTPGTYN" misc_feature 310659..311900 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /inference="protein motif:HMMPfam:PF04997" /note="HMMPfam hit to PF04997, RNA polymerase Rpb1, domain 1, score 1.3e-119" misc_feature 311904..312332 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /inference="protein motif:HMMPfam:PF00623" /note="HMMPfam hit to PF00623, RNA polymerase, alpha subunit, score 8.9e-82" misc_feature 312339..312830 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /inference="protein motif:HMMPfam:PF04983" /note="HMMPfam hit to PF04983, RNA polymerase Rpb1, domain 3, score 1.8e-26" misc_feature 312903..313145 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /inference="protein motif:HMMPfam:PF05000" /note="HMMPfam hit to PF05000, RNA polymerase Rpb1, domain 4, score 5.1e-19" misc_feature 313149..314261 /gene="rpoC" /locus_tag="CMS_0270" /old_locus_tag="CMS0270" /inference="protein motif:HMMPfam:PF04998" /note="HMMPfam hit to PF04998, RNA polymerase Rpb1, domain 5, score 5.5e-69" gene 314619..315221 /locus_tag="CMS_0271" /old_locus_tag="CMS0271" /db_xref="GeneID:6158962" CDS 314619..315221 /locus_tag="CMS_0271" /old_locus_tag="CMS0271" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709053.1" /db_xref="GI:170780721" /db_xref="GeneID:6158962" /translation="MHRAPPSRRPRAPGPGDAAAIQWADPAAPTPGTRGGVVRMLEDV VLAWRAHALRYATEAASPTGGASGSGSCPDCDASPFTDQEAIPRDAPHTAIHPLIAAL EVARAEAARDARERLYRETRGPVYRDHPFGMPAFVDYGEREEEIQQVVDQAMERELAP LAPVIRRALDRFVNLRLVALEGEIGPVPDGRDGSDPEPLF" gene 315292..316275 /locus_tag="CMS_0272" /old_locus_tag="CMS0272" /db_xref="GeneID:6156253" CDS 315292..316275 /locus_tag="CMS_0272" /old_locus_tag="CMS0272" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding transport protein" /protein_id="YP_001709054.1" /db_xref="GI:170780722" /db_xref="GeneID:6156253" /translation="MRPWRSAHPDGFRTPRAPHRARSTRTQHPHEAIPLRRSAVTART PMTLRPRLRPSLALTGLLAAAALGLAGCASGDAGTGSANGTSGTPAAATSLSDVKAKG ELVIGTEGTYSPFSFHEGSGSGALTGYDVEVATAVADKLGVKPVFEETQFDGIFAGLE AGRWDVIANQISITDERKTVYDFSEPYTVSPGVIIVKGSDSGISSFADLEGKTTAQSL TSNWNELATQSGAKVEAVEGFAQAVTLLQQGRVDATINDRLTLLDYQKQQGDSDLKVA AETDDPSLSALVFRKGSDDLVAAVDQALADLRADGTLAGISDKYFGADVSQ" misc_feature 315601..316260 /locus_tag="CMS_0272" /old_locus_tag="CMS0272" /inference="protein motif:HMMPfam:PF00497" /note="HMMPfam hit to PF00497, Bacterial extracellular solute-binding protein, family 3, score 8e-90" misc_feature 315673..315714 /locus_tag="CMS_0272" /old_locus_tag="CMS0272" /note="PS01039 Bacterial extracellular solute-binding proteins, family 3 signature." misc_feature 315745..315822 /locus_tag="CMS_0272" /old_locus_tag="CMS0272" /note="PS00217 Sugar transport proteins signature 2." gene 316320..316985 /locus_tag="CMS_0273" /old_locus_tag="CMS0273" /db_xref="GeneID:6156254" CDS 316320..316985 /locus_tag="CMS_0273" /old_locus_tag="CMS0273" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709055.1" /db_xref="GI:170780723" /db_xref="GeneID:6156254" /translation="MSREWDLFWSSFGPLALETIRGTIPLALVTFALGLAIALGLALM RLYGNRLVSGIARFYISVVRGTPLLVQLFVIFYGLPSIGVVLPPWPSAVIALSLNVGG YAAEIIRASILSVPRGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKD TSLASVILVTELFKQAQLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRY VAH" misc_feature 316365..316970 /locus_tag="CMS_0273" /old_locus_tag="CMS0273" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3e-31" misc_feature order(316389..316457,316518..316586,316881..316940) /locus_tag="CMS_0273" /old_locus_tag="CMS0273" /note="3 probable transmembrane helices predicted for CMS0273 by TMHMM2.0 at aa 24-46, 67-89 and 188-207" misc_feature 316653..316739 /locus_tag="CMS_0273" /old_locus_tag="CMS0273" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 317116..317811 /locus_tag="CMS_0274" /old_locus_tag="CMS0274" /db_xref="GeneID:6156255" CDS 317116..317811 /locus_tag="CMS_0274" /old_locus_tag="CMS0274" /codon_start=1 /transl_table=11 /product="putative ATP-binding ABC transport protein" /protein_id="YP_001709056.1" /db_xref="GI:170780724" /db_xref="GeneID:6156255" /translation="MTALIGPSGSGKTTVLRSLNGLEVPEEGVVEVAAADADSRSRTS GPLRVDFAAKPRHRELLALRDRSAMVFQQYNLFPHKTVLENVIEGPVQVQRRPVAEAT REAEELLARVGLSDKRDQHPFQLSGGQQQRVGIVRALALRPQILLFDEPTSALDPELV GEVLSVIKELADEAWTMVIVTHELAFARQVADEVVFMDGGVVVERGHPSQVLQHPTEE RTRRFLQRLLEPF" misc_feature 317116..317715 /locus_tag="CMS_0274" /old_locus_tag="CMS0274" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 8e-56" misc_feature 317131..317154 /locus_tag="CMS_0274" /old_locus_tag="CMS0274" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 317488..317532 /locus_tag="CMS_0274" /old_locus_tag="CMS0274" /note="PS00211 ABC transporters family signature." gene 317885..318787 /locus_tag="CMS_0275" /old_locus_tag="CMS0275" /db_xref="GeneID:6156256" CDS 317885..318787 /locus_tag="CMS_0275" /old_locus_tag="CMS0275" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709057.1" /db_xref="GI:170780725" /db_xref="GeneID:6156256" /translation="MTDDRPAPHRQPDEADQPLDPRTPDERAAAAFDDGPADRGADSA HSDTSTFDQTAFAAPVDEDHENRERERRESEARVAEARARDDREREAREADARERDER DRRARDEEAARQSQSQPIYVQAPVPPEKRGNRGFGVLIAVVAAILFALLYSLGTALLA SVRNPDAFGDVFGRYLLSPVFYVPTIAFLVFFVLLALLVNRGKWWAFVLGGLPVAILV YAAYVGTRLLQGGVMDLAPSEQALLLQRTVTFPDGILAGFLARELVTWLGAGISARGR RVKAKNVEARAEYDRKLAEQPDHR" misc_feature order(318296..318364,318407..318475,318494..318553) /locus_tag="CMS_0275" /old_locus_tag="CMS0275" /note="3 probable transmembrane helices predicted for CMS0275 by TMHMM2.0 at aa 138-160, 175-197 and 204-223" gene 318831..319232 /locus_tag="CMS_0276" /old_locus_tag="CMS0276" /db_xref="GeneID:6156257" CDS 318831..319232 /locus_tag="CMS_0276" /old_locus_tag="CMS0276" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709058.1" /db_xref="GI:170780726" /db_xref="GeneID:6156257" /translation="MHVALVVCVFGFAALFGGDDVIPERDAGVLLGPVMVVSATLVFA VGLIRTTRAADRERRIPVLPVLGWGAGAWLAYGIVGAVLYLLGGADVFASLAFAVRHL VDPFGIAVLGISALLGLGAVALAARGPSSTV" misc_feature order(318843..318896,318909..318977,319014..319082, 319140..319208) /locus_tag="CMS_0276" /old_locus_tag="CMS0276" /note="4 probable transmembrane helices predicted for CMS0276 by TMHMM2.0 at aa 5-22, 27-49, 62-84 and 104-126" gene 319497..319871 /gene="rpsL" /locus_tag="CMS_0277" /old_locus_tag="CMS0277" /db_xref="GeneID:6156258" CDS 319497..319871 /gene="rpsL" /locus_tag="CMS_0277" /old_locus_tag="CMS0277" /note="interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12" /protein_id="YP_001709059.1" /db_xref="GI:170780727" /db_xref="GeneID:6156258" /translation="MPTIQQLVRKGRTPKVVKTKAPALKANPQQRGVCTRVYTTTPKK PNSALRKVARVKLSNGQEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIVRGAL DTQAVKNRKQARSRYGAKMEKK" misc_feature 319503..319865 /gene="rpsL" /locus_tag="CMS_0277" /old_locus_tag="CMS0277" /inference="protein motif:HMMPfam:PF00164" /note="HMMPfam hit to PF00164, Ribosomal protein S12/S23,score 2e-74" misc_feature 319623..319646 /gene="rpsL" /locus_tag="CMS_0277" /old_locus_tag="CMS0277" /note="PS00055 Ribosomal protein S12 signature." gene 319871..320341 /locus_tag="CMS_0278" /old_locus_tag="CMS0278" /db_xref="GeneID:6156259" CDS 319871..320341 /locus_tag="CMS_0278" /old_locus_tag="CMS0278" /note="binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S7" /protein_id="YP_001709060.1" /db_xref="GI:170780728" /db_xref="GeneID:6156259" /translation="MPRKGPAPKRPVVADPVYGAPIVSQLVNKILLDGKKGLAERIVY DALAGVAAKNGQDAVVTLKKALDNVRPALEVRSRRVGGSTYQVPIEVKPHRANTLALR WLTTYAKSRREKTMTERLTNEILDASNGLGAAVKRREDTHKMAESNKAFAHYRW" misc_feature 319871..320317 /locus_tag="CMS_0278" /old_locus_tag="CMS0278" /inference="protein motif:HMMPfam:PF00177" /note="HMMPfam hit to PF00177, Ribosomal protein S7, score 2.7e-79" gene 320389..322503 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /db_xref="GeneID:6156260" CDS 320389..322503 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /note="EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene" /codon_start=1 /transl_table=11 /product="elongation factor G" /protein_id="YP_001709061.1" /db_xref="GI:170780729" /db_xref="GeneID:6156260" /translation="MAQDVLTDLNKVRNIGIMAHIDAGKTTTTERILYYTGITHKIGE VHDGAATMDWMAQEQERGITITSAATTCFWNKNQINIIDTPGHVDFTVEVERSLRVLD GAVAVFDGKEGVEPQSETVWRQADKYDVPRICFVNKMDKLGADFYFTVDTIVNRLGAK PLVIQLPIGAEGGFEGVIDLVEMRALTWRGDSKGDVELGAKYDIEEIPADLKDKADEY RAKLLETVAETDDALLEKYFGGEELTVAEIKAAIRKLTVNSEIYPVLCGSAFKNRGVQ PMLDAVIDYLPSPLDVPPMEGHDVRDEEKIIIRKPDSTEPFSALAFKVAVHPFFGRLT YVRVYSGHIASGSQVINSTKGKKERIGKIFQMHSNKENPVDSVTAGHIYAVIGLKDTT TGDTLCDPQDQIVLESMTFPEPVIEVAIEPKTKADQEKLGVAIQKLAEEDPTFRTEQN QETGQTVIKGMGELHLDILVDRMKREFNVEANVGKPQVAYRETIRGTVDKHDFTHKKQ TGGSGQFAKIQIKIEPMEVTAEKTYEFDNKVTGGRVPREYIPSVDAGIQDALQVGILA GYPMVGVKATLLDGAAHDVDSSEMAFKIAGSMAFKEAARKAKPVLLEPLMAVEVRTPE EYMGDVIGDLNSRRGQIQAMEDASGVKVITANVPLSEMFGYVGDLRSKTSGRAVYSMS FGSYAEVPKAVADEIVQKNKGE" misc_feature 320416..321258 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 6.7e-118" misc_feature 320443..320466 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 320545..320592 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /note="PS00301 GTP-binding elongation factors signature." misc_feature 321379..321582 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 1.9e-17" misc_feature 321844..322212 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /inference="protein motif:HMMPfam:PF03764" /note="HMMPfam hit to PF03764, Elongation factor G, domain IV, score 2.9e-65" misc_feature 322216..322479 /locus_tag="CMS_0279" /old_locus_tag="CMS0279" /inference="protein motif:HMMPfam:PF00679" /note="HMMPfam hit to PF00679, Elongation factor G,C-terminal, score 2.7e-45" gene 322618..323811 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /db_xref="GeneID:6156261" CDS 322618..323811 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /note="EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="YP_001709062.1" /db_xref="GI:170780730" /db_xref="GeneID:6156261" /translation="MGKAKFERTKPHVNIGTIGHVDHGKTTLTAAISKVLADKYPSAT NVQRDFASIDSAPEERQRGITINISHVEYETPKRHYAHVDAPGHADYIKNMITGAAQM DGAILVVAATDGPMAQTREHVLLAKQVGVPYLLVALNKSDMVDDEEILELVELEVREL LSSQDFDGDNAPVVQVSGLKALEGDEKWVEQIVKLMEAVDESIPEPVRDKDKPFLMPV EDVFTITGRGTVVTGRAERGTLAINSDVEIVGIRPTVKTTVTGIEMFHKQLDEAWAGE NCGLLLRGTKREDVERGQVIVKPGSVTPHTKFEGTAYILSKEEGGRHNPFYGNYRPQF YFRTTDVTGVITLPEGAEMVMPGDTTDMKVELIQPIAMEEGLGFAIREGGRTVGAGTV TKIVK" misc_feature 322645..323238 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 1.9e-95" misc_feature 322672..322695 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 322777..322824 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /note="PS00301 GTP-binding elongation factors signature." misc_feature 323299..323508 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 1.9e-24" misc_feature 323521..323805 /locus_tag="CMS_0280" /old_locus_tag="CMS0280" /inference="protein motif:HMMPfam:PF03143" /note="HMMPfam hit to PF03143, Elongation factor Tu,C-terminal, score 7.8e-53" gene 323961..324929 /locus_tag="CMS_0281" /old_locus_tag="CMS0281" /db_xref="GeneID:6156262" CDS 323961..324929 /locus_tag="CMS_0281" /old_locus_tag="CMS0281" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709063.1" /db_xref="GI:170780731" /db_xref="GeneID:6156262" /translation="MVRLRRSDATGKGYTRKRAGRGWTYLDAQGNRVTDRVLRARMEK LGIPPAWTDVWIAPYENGHVQATGMDSAGRRQYIYHPTWREQKDRIKFDRALQLAESL PAARRQVTIHLRQDGFTRDRALAAGFRMLDTGSLRVGSERYTESNGSHGLSTLLCSHV AIHGETVHLEFPAKSGQEWSSDIKDADLVKVIRGLKRRGPNARLLAYRDGDVWHPLGA ADINAYVQERTGGEFTAKDFRTLHGTVAAAISLAKHGPEDAKGKRQRALAQAYRDAAE VLSNTPTIAKNSYVNPRLVDEYGHGRTIDPQRLASGETELRNLLFR" gene 325369..325677 /gene="rpsJ" /locus_tag="CMS_0282" /old_locus_tag="CMS0282" /db_xref="GeneID:6156263" CDS 325369..325677 /gene="rpsJ" /locus_tag="CMS_0282" /old_locus_tag="CMS0282" /note="NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10" /protein_id="YP_001709064.1" /db_xref="GI:170780732" /db_xref="GeneID:6156263" /translation="MAGQKIRIRLKSYDHSVIDSSARKIVDTVTRAGATVVGPVPLPT EKNVICVIRSPHKYKDSREHFEMRTHKRLIDIVDPTPKAVDSLMRLDLPADVNIEIKL" misc_feature 325381..325668 /gene="rpsJ" /locus_tag="CMS_0282" /old_locus_tag="CMS0282" /inference="protein motif:HMMPfam:PF00338" /note="HMMPfam hit to PF00338, Ribosomal protein S10,score 3.9e-60" misc_feature 325453..325500 /gene="rpsJ" /locus_tag="CMS_0282" /old_locus_tag="CMS0282" /note="PS00361 Ribosomal protein S10 signature." gene 325686..326339 /gene="rplC" /locus_tag="CMS_0283" /old_locus_tag="CMS0283" /db_xref="GeneID:6156264" CDS 325686..326339 /gene="rplC" /locus_tag="CMS_0283" /old_locus_tag="CMS0283" /note="binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="YP_001709065.1" /db_xref="GI:170780733" /db_xref="GeneID:6156264" /translation="MSTANRTFTGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQV RTPEVDGYGAIQIAYGQIDPRKADKPSTGHFDKAGVTPRRHLTEVRTADFAEYTLGQE ITVGAFEPGTKVDVVGTSKGKGFAGVMKRHNFKGVSASHGSHRNHRKPGSIGASSTPS RVFKGMRMAGRMGGERVTVLNLVVHSVDAEKGLLLVKGAVPGARGRIVFVRNAVKGK" misc_feature 325728..326318 /gene="rplC" /locus_tag="CMS_0283" /old_locus_tag="CMS0283" /inference="protein motif:HMMPfam:PF00297" /note="HMMPfam hit to PF00297, Ribosomal protein L3, score 4e-78" misc_feature 326007..326078 /gene="rplC" /locus_tag="CMS_0283" /old_locus_tag="CMS0283" /note="PS00474 Ribosomal protein L3 signature." gene 326342..326998 /gene="rplD" /locus_tag="CMS_0284" /old_locus_tag="CMS0284" /db_xref="GeneID:6156265" CDS 326342..326998 /gene="rplD" /locus_tag="CMS_0284" /old_locus_tag="CMS0284" /note="L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="YP_001709066.1" /db_xref="GI:170780734" /db_xref="GeneID:6156265" /translation="MATDTQLDVLDATGAVTGSVDLPASIFDVQTNVPLIHQVVVAQL AAARQGTHKTKGRGEVSGAGRKPFKQKGTGRARQGSIRAPQMTGGGIVHGPTPRNYSQ RTPKKMIAAALLGALSDRARGARLHVIESLSAGDVPSTKTVVALLEGIATSKHVLIVL ERTDEVSLRSVRNIPTVHVLSYDQLNAYDVLVSDDIVFTKGAFDAFVESKTAKEEVAA" misc_feature 326396..326968 /gene="rplD" /locus_tag="CMS_0284" /old_locus_tag="CMS0284" /inference="protein motif:HMMPfam:PF00573" /note="HMMPfam hit to PF00573, Ribosomal protein L4/L1e,score 2.8e-65" gene 326995..327294 /gene="rplW" /locus_tag="CMS_0285" /old_locus_tag="CMS0285" /db_xref="GeneID:6156266" CDS 326995..327294 /gene="rplW" /locus_tag="CMS_0285" /old_locus_tag="CMS0285" /note="binds third domain of 23S rRNA and protein L29; part of exit tunnel" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L23" /protein_id="YP_001709067.1" /db_xref="GI:170780735" /db_xref="GeneID:6156266" /translation="MSATQKDPRDIIIAPVVSEKSYGLIDQGKYTFIVDPRSNKTEIK LAIEKIFGVQVASVNTLNKQGKTRRTKFGMGKRKDTKRAIVSLKSGSIDIFTTVG" misc_feature 327019..327288 /gene="rplW" /locus_tag="CMS_0285" /old_locus_tag="CMS0285" /inference="protein motif:HMMPfam:PF00276" /note="HMMPfam hit to PF00276, Ribosomal L23 protein,score 2.2e-30" gene 327317..328156 /gene="rplB" /locus_tag="CMS_0286" /old_locus_tag="CMS0286" /db_xref="GeneID:6158952" CDS 327317..328156 /gene="rplB" /locus_tag="CMS_0286" /old_locus_tag="CMS0286" /note="one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L2" /protein_id="YP_001709068.1" /db_xref="GI:170780736" /db_xref="GeneID:6158952" /translation="MAIRKYKPTTPGRRGSSVADFAEITRSTPEKSLLRPLPKHGGRN NAGRITTRHIGGGHKRQYRVIDFKRNDKDGVLATVAHIEYDPNRTARIALLHFIDGTK RYIIAPNKLKQGDKIESGAQADIKPGNNLPLRNIPTGTVIHAIELRPGGGAKMGRSAG ASVRLVAKDGPYAQLRLPSGEIRNVDARCRATIGEVGNAEQSNINWGKAGRMRWKGVR PTVRGVAMNPVDHPHGGGEGKTSGGRHPVSPWGQKEGRTRHINKPSDKLIVRRRNAGK KRK" misc_feature 327440..327673 /gene="rplB" /locus_tag="CMS_0286" /old_locus_tag="CMS0286" /inference="protein motif:HMMPfam:PF00181" /note="HMMPfam hit to PF00181, Ribosomal protein L2, score 1.3e-44" misc_feature 327689..328075 /gene="rplB" /locus_tag="CMS_0286" /old_locus_tag="CMS0286" /inference="protein motif:HMMPfam:PF03947" /note="HMMPfam hit to PF03947, Ribosomal protein L2, score 9.5e-84" misc_feature 327971..328006 /gene="rplB" /locus_tag="CMS_0286" /old_locus_tag="CMS0286" /note="PS00467 Ribosomal protein L2 signature." gene 328169..328450 /gene="rpsS" /locus_tag="CMS_0287" /old_locus_tag="CMS0287" /db_xref="GeneID:6156267" CDS 328169..328450 /gene="rpsS" /locus_tag="CMS_0287" /old_locus_tag="CMS0287" /note="protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S19" /protein_id="YP_001709069.1" /db_xref="GI:170780737" /db_xref="GeneID:6156267" /translation="MPRSLKKGPFVDDHLLRKVISANEASSKNVIKTWSRRSMIIPAM LGHTIAVHDGRKHVPVFVTESMVGHKLGEFALTRTFRGHVKDDKKGRRR" misc_feature 328175..328417 /gene="rpsS" /locus_tag="CMS_0287" /old_locus_tag="CMS0287" /inference="protein motif:HMMPfam:PF00203" /note="HMMPfam hit to PF00203, Ribosomal protein S19/S15,score 7.8e-50" misc_feature 328325..328399 /gene="rpsS" /locus_tag="CMS_0287" /old_locus_tag="CMS0287" /note="PS00323 Ribosomal protein S19 signature." gene 328476..328868 /gene="rplV" /locus_tag="CMS_0288" /old_locus_tag="CMS0288" /db_xref="GeneID:6156268" CDS 328476..328868 /gene="rplV" /locus_tag="CMS_0288" /old_locus_tag="CMS0288" /note="binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="YP_001709070.1" /db_xref="GI:170780738" /db_xref="GeneID:6156268" /translation="MVESIARVRHIRVTPQKARRVVDMIRGKQAEEALAILKFAPQGA SEPIYKLVASAMANARVKADASNSFLAEQDLYIAKAFVDEGTTLKRFQPRAQGRAFRI NKRTSHITVVLATPDEADVATTAKKASK" misc_feature 328491..328820 /gene="rplV" /locus_tag="CMS_0288" /old_locus_tag="CMS0288" /inference="protein motif:HMMPfam:PF00237" /note="HMMPfam hit to PF00237, Ribosomal protein L22/L17,score 9.1e-49" misc_feature 328740..328814 /gene="rplV" /locus_tag="CMS_0288" /old_locus_tag="CMS0288" /note="PS00464 Ribosomal protein L22 signature." gene 328868..329665 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /db_xref="GeneID:6156269" CDS 328868..329665 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /note="forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="YP_001709071.1" /db_xref="GI:170780739" /db_xref="GeneID:6156269" /translation="MGQKVNPYGFRLGITTDHVSRWFSDSTKKGQRYSDYVAEDVRIR TMLKTSLDRAGVARIEIERTRDRVRVDIYTARPGIVIGRRGVEAERIRADLEKLTGKQ IQLNILEVKNPEAEAQLVAQGIAEQLAGRVAFRRAMRKGLQGAQRAGAKGVRIQVSGR LGGAEMSRSEFYREGRVPLHTLRANIDYGFYEARTSFGRIGVKVWVYKGDITNKDLAR EQANQKSSRPERRNDRSDGRTGDRRTNAPRTAPAAEAAPVAAAGVEA" misc_feature 328868..329065 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /inference="protein motif:HMMPfam:PF00417" /note="HMMPfam hit to PF00417, Ribosomal protein S3,N-terminal, score 7.5e-24" misc_feature 329066..329230 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /inference="protein motif:HMMPfam:PF07650" /note="HMMPfam hit to PF07650, KH, type 2, score 7.4e-22" misc_feature 329234..329485 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /inference="protein motif:HMMPfam:PF00189" /note="HMMPfam hit to PF00189, Ribosomal protein S3,C-terminal, score 1.4e-42" misc_feature 329366..329470 /gene="rpsC" /locus_tag="CMS_0289" /old_locus_tag="CMS0289" /note="PS00548 Ribosomal protein S3 signature." gene 329668..330087 /gene="rplP" /locus_tag="CMS_0290" /old_locus_tag="CMS0290" /db_xref="GeneID:6156270" CDS 329668..330087 /gene="rplP" /locus_tag="CMS_0290" /old_locus_tag="CMS0290" /note="located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="YP_001709072.1" /db_xref="GI:170780740" /db_xref="GeneID:6156270" /translation="MLIPRKVKHRKQHHPGRTGHATGGTVVSFGEYGIQALTPAYVTN RQIESARIAMTRHVKRGGNVYINIFPDRPLTKKPAETRMGSGKGSVEWWVANVKPGRV LFELSGVDEATAREALTRAIHKLPLKARIIKREEGDA" misc_feature 329668..330063 /gene="rplP" /locus_tag="CMS_0290" /old_locus_tag="CMS0290" /inference="protein motif:HMMPfam:PF00252" /note="HMMPfam hit to PF00252, Ribosomal protein L16,score 3.2e-68" misc_feature 329911..329946 /gene="rplP" /locus_tag="CMS_0290" /old_locus_tag="CMS0290" /note="PS00701 Ribosomal protein L16 signature 2." gene 330087..330413 /gene="rpmC" /locus_tag="CMS_0291" /old_locus_tag="CMS0291" /db_xref="GeneID:6156271" CDS 330087..330413 /gene="rpmC" /locus_tag="CMS_0291" /old_locus_tag="CMS0291" /codon_start=1 /transl_table=11 /product="50s ribosomal protein l29" /protein_id="YP_001709073.1" /db_xref="GI:170780741" /db_xref="GeneID:6156271" /translation="MAIGSKELAPVELDTFEDERLVEELKKAKEELFNLRFQSATGQL DSHGRLRAVKRDIARIYTVIRERELGIRATPAPVEVPEKPEKKKATKKAAKADDAAVT EKAEEA" misc_feature 330114..330287 /gene="rpmC" /locus_tag="CMS_0291" /old_locus_tag="CMS0291" /inference="protein motif:HMMPfam:PF00831" /note="HMMPfam hit to PF00831, Ribosomal protein L29,score 9.4e-24" gene 330410..330712 /gene="rpsQ" /locus_tag="CMS_0292" /old_locus_tag="CMS0292" /db_xref="GeneID:6158956" CDS 330410..330712 /gene="rpsQ" /locus_tag="CMS_0292" /old_locus_tag="CMS0292" /note="primary binding protein; helps mediate assembly; involved in translation fidelity" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="YP_001709074.1" /db_xref="GI:170780742" /db_xref="GeneID:6158956" /translation="MIMANAEEKNTADTATADRGYRKSRRGYVTSDKMDKTIVVEVED RVKHPLYGKVIRRTSKVKAHDEANTAGIGDLVLINETRPLSASKRWRLVEILEKAK" misc_feature 330488..330694 /gene="rpsQ" /locus_tag="CMS_0292" /old_locus_tag="CMS0292" /inference="protein motif:HMMPfam:PF00366" /note="HMMPfam hit to PF00366, Ribosomal protein S17,score 5.6e-35" misc_feature 330626..330664 /gene="rpsQ" /locus_tag="CMS_0292" /old_locus_tag="CMS0292" /note="PS00056 Ribosomal protein S17 signature." gene 330723..331109 /gene="rplN" /locus_tag="CMS_0293" /old_locus_tag="CMS0293" /db_xref="GeneID:6156272" CDS 330723..331109 /gene="rplN" /locus_tag="CMS_0293" /old_locus_tag="CMS0293" /note="binds to the 23S rRNA between the centers for peptidyl transferase and GTPase" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="YP_001709075.1" /db_xref="GI:170780743" /db_xref="GeneID:6156272" /translation="MDEGATVIQQESRLKIADNTGAKEILTIRVLGGSGRRYAGLGDV IVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGT RIFGPVGRELRDKKFMKIISLAPEVI" misc_feature 330741..331106 /gene="rplN" /locus_tag="CMS_0293" /old_locus_tag="CMS0293" /inference="protein motif:HMMPfam:PF00238" /note="HMMPfam hit to PF00238, Ribosomal protein L14b/L23e, score 3.2e-77" misc_feature 330918..330998 /gene="rplN" /locus_tag="CMS_0293" /old_locus_tag="CMS0293" /note="PS00049 Ribosomal protein L14 signature." gene 331112..331471 /gene="rplX" /locus_tag="CMS_0294" /old_locus_tag="CMS0294" /db_xref="GeneID:6156273" CDS 331112..331471 /gene="rplX" /locus_tag="CMS_0294" /old_locus_tag="CMS0294" /note="assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L24" /protein_id="YP_001709076.1" /db_xref="GI:170780744" /db_xref="GeneID:6156273" /translation="MANIKKGDLVQVITGRTQAKGGDRGKQGRVLSVLVERNRVVVEG VNFVTKHVRVGQTQRGSKTGGIETVEAPIHISNVALVDPESKKPTRVGFRTETVEKDG VSKTVRVRYAKKSGKDL" misc_feature 331121..331240 /gene="rplX" /locus_tag="CMS_0294" /old_locus_tag="CMS0294" /inference="protein motif:HMMPfam:PF00467" /note="HMMPfam hit to PF00467, KOW, score 1.2e-05" gene 331474..332070 /gene="rplE" /locus_tag="CMS_0295" /old_locus_tag="CMS0295" /db_xref="GeneID:6156274" CDS 331474..332070 /gene="rplE" /locus_tag="CMS_0295" /old_locus_tag="CMS0295" /note="part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="YP_001709077.1" /db_xref="GI:170780745" /db_xref="GeneID:6156274" /translation="MTDTATAGTAEGTTLPRLKQKYRTEIVSQLTADLGFTNVHQVPG LTKIVVNMGVGDAARDGKIIDGAVADLTKITGQKPQVTKARKSIAQFKLREGQAIGTH VTLRGDRMWEFLDRLLSLALPRIRDFRGLSPKQFDGNGNYTFGLNEQSMFHEIDQDRI DRVRGMDITVVTTARTDDEGRALLKALGFPFQTPENTP" misc_feature 331585..331755 /gene="rplE" /locus_tag="CMS_0295" /old_locus_tag="CMS0295" /inference="protein motif:HMMPfam:PF00281" /note="HMMPfam hit to PF00281, Ribosomal protein L5, score 3.9e-31" misc_feature 331765..332049 /gene="rplE" /locus_tag="CMS_0295" /old_locus_tag="CMS0295" /inference="protein motif:HMMPfam:PF00673" /note="HMMPfam hit to PF00673, Ribosomal protein L5, score 2.5e-56" gene 332236..332607 /locus_tag="CMS_0296" /old_locus_tag="CMS0296" /db_xref="GeneID:6156275" CDS 332236..332607 /locus_tag="CMS_0296" /old_locus_tag="CMS0296" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="YP_001709078.1" /db_xref="GI:170780746" /db_xref="GeneID:6156275" /translation="MLTRLRNANSAHHDTVSMPHSKLKSHIADILKSEGFIAGWDVAD ARVGQTLTLSLKFGSDRERSIRGIKRVSKPGLRVYAKSAEIPQVLGGLGVAILSTSSG LLTDRQAAKKGVGGEVLAYVW" misc_feature 332236..332604 /locus_tag="CMS_0296" /old_locus_tag="CMS0296" /inference="protein motif:HMMPfam:PF00410" /note="HMMPfam hit to PF00410, Ribosomal protein S8, score 3.1e-59" misc_feature 332512..332565 /locus_tag="CMS_0296" /old_locus_tag="CMS0296" /note="PS00053 Ribosomal protein S8 signature." gene 332612..333148 /gene="rplF" /locus_tag="CMS_0297" /old_locus_tag="CMS0297" /db_xref="GeneID:6156276" CDS 332612..333148 /gene="rplF" /locus_tag="CMS_0297" /old_locus_tag="CMS0297" /note="ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="YP_001709079.1" /db_xref="GI:170780747" /db_xref="GeneID:6156276" /translation="MSRIGRLPIDVPAGVDVSVDGQHVTVKGPKGELSLTIAQPIRAE VQDGQVLVTRPDDERESRSLHGLTRSLIANNIVGVTTGYTKGLEIVGTGYRVALKDKG VEFALGFSHPVYVEAPAGISFTVEGVNKMTVVGIDKQLVGETAANIRKIRKPEPYKGK GVRYAGENVRRKAGKSGK" misc_feature 332642..332857 /gene="rplF" /locus_tag="CMS_0297" /old_locus_tag="CMS0297" /inference="protein motif:HMMPfam:PF00347" /note="HMMPfam hit to PF00347, Ribosomal protein L6, score 2.2e-22" misc_feature 332879..333106 /gene="rplF" /locus_tag="CMS_0297" /old_locus_tag="CMS0297" /inference="protein motif:HMMPfam:PF00347" /note="HMMPfam hit to PF00347, Ribosomal protein L6, score 4.2e-25" misc_feature 333071..333097 /gene="rplF" /locus_tag="CMS_0297" /old_locus_tag="CMS0297" /note="PS00525 Ribosomal protein L6 signature 1." gene 333145..333522 /gene="rplR" /locus_tag="CMS_0298" /old_locus_tag="CMS0298" /db_xref="GeneID:6156277" CDS 333145..333522 /gene="rplR" /locus_tag="CMS_0298" /old_locus_tag="CMS0298" /note="binds 5S rRNA along with protein L5 and L25" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="YP_001709080.1" /db_xref="GI:170780748" /db_xref="GeneID:6156277" /translation="MIMALGVRGKSKSAARGRRHARLRKKVEGTELRPRLVVTRSARH VFVQVVDDSRGHTVASASTLEADMRTFDGDKTAKSRKVGELVAERAKAAGVESVVFDR GGNRYAGRVAAIAEGAREGGLSL" misc_feature 333154..333177 /gene="rplR" /locus_tag="CMS_0298" /old_locus_tag="CMS0298" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 333175..333519 /gene="rplR" /locus_tag="CMS_0298" /old_locus_tag="CMS0298" /inference="protein motif:HMMPfam:PF00861" /note="HMMPfam hit to PF00861, Ribosomal protein L18P/L5E,score 2.3e-48" gene 333564..334223 /gene="rpsE" /locus_tag="CMS_0299" /old_locus_tag="CMS0299" /db_xref="GeneID:6156278" CDS 333564..334223 /gene="rpsE" /locus_tag="CMS_0299" /old_locus_tag="CMS0299" /note="located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="YP_001709081.1" /db_xref="GI:170780749" /db_xref="GeneID:6156278" /translation="MAETPVETAASTAPAQNEGREGRRGGRDRNQGGRDSRGGRDADK SQFLERVVTINRVSKVVKGGRRFSFTALVIVGDGNGLVGVGYGKAREVPTAISKGVEE AKKNFFRVPRIGLTIPHAVQGEASAGVVLLRPASAGTGVIAGGPVRAVLECAGIHDVL SKSLGSSNTINIVHATVEALKQLEEPRAVAARRGLELEQVVPARILRAQRAEADAKAG V" misc_feature 333699..333899 /gene="rpsE" /locus_tag="CMS_0299" /old_locus_tag="CMS0299" /inference="protein motif:HMMPfam:PF00333" /note="HMMPfam hit to PF00333, Ribosomal protein S5, score 9.4e-41" misc_feature 333753..333851 /gene="rpsE" /locus_tag="CMS_0299" /old_locus_tag="CMS0299" /note="PS00585 Ribosomal protein S5 signature." misc_feature 333924..334145 /gene="rpsE" /locus_tag="CMS_0299" /old_locus_tag="CMS0299" /inference="protein motif:HMMPfam:PF03719" /note="HMMPfam hit to PF03719, Ribosomal protein S5,C-terminal, score 1.1e-38" gene 334223..334405 /gene="rpmD" /locus_tag="CMS_0300" /old_locus_tag="CMS0300" /db_xref="GeneID:6156279" CDS 334223..334405 /gene="rpmD" /locus_tag="CMS_0300" /old_locus_tag="CMS0300" /note="L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L30" /protein_id="YP_001709082.1" /db_xref="GI:170780750" /db_xref="GeneID:6156279" /translation="MAQLRVTQIKSKISEKQNQRDTLRSLGLRRIGAVVVREDNAQNR GYVNTVAHLVKVEEID" misc_feature 334226..334384 /gene="rpmD" /locus_tag="CMS_0300" /old_locus_tag="CMS0300" /inference="protein motif:HMMPfam:PF00327" /note="HMMPfam hit to PF00327, Ribosomal protein L30,score 9.1e-15" gene 334438..334983 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /db_xref="GeneID:6156280" CDS 334438..334983 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /note="late assembly protein" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L15" /protein_id="YP_001709083.1" /db_xref="GI:170780751" /db_xref="GeneID:6156280" /translation="MKAPKAAPKKTAKVPAAAAAASAEATTVGSTETVKREQVLKVHH LRPAAGAKKARQRVGRGEGSKGKTAGRGTKGTKARYTVRVGFEGGQMPLHMRTPKLRG FKNPFRVEYQVVNLEKLAALYPDGGDVTTSDLVAKGAVRKNEKVKVLGDGDISVKLTV AVDKVSGSAAEKIVAAGGSVK" misc_feature 334555..334857 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /inference="protein motif:HMMPfam:PF01305" /note="HMMPfam hit to PF01305, Ribosomal protein L15,score 5.2e-46" misc_feature 334618..334641 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 334876..334971 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /inference="protein motif:HMMPfam:PF00256" /note="HMMPfam hit to PF00256, Ribosomal protein L15,score 3.1e-10" misc_feature 334876..334968 /gene="rplO" /locus_tag="CMS_0301" /old_locus_tag="CMS0301" /note="PS00475 Ribosomal protein L15 signature." gene 335109..336431 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /db_xref="GeneID:6158948" CDS 335109..336431 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /note="forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecY" /protein_id="YP_001709084.1" /db_xref="GI:170780752" /db_xref="GeneID:6158948" /translation="MLSAVVRIFRTPDLRRKIGFTLGIIALFRLGSFIPAPFVDFANV QSCLAANQGTSGLYELVNLFSGGALLKLSIFALGIMPYITASIIVQLLRVVIPHFDTL YKEGQSGQAKLTQYTRYLTIALAVLQSTTLITVARSGALFGQTNVSACTQLVTNDAWY AIMLMVITMTAGTGLIMWMGELITERGIGNGMSLLIFTSVAAAFPTSLIAIQQSRGWE VFLLVIAVGLLVVAAVVYVEQSQRRIPVQYAKRMVGRRTYGGNNTYIPIKVNMAGVVP VIFASSLLYLPALVAQFNQPPVGQPPAPWVQWITDNLTTGDHPLYMVMYFLLIVGFTY FYVAITFNPEEVADNMKKYGGFIPGIRAGRPTAEYLDYVLTRITLPGSLYLGLIALLP LIALSLVGANQNFPFGGASILIVVGVGLETVKQIDSQLQQRHYEGLLK" sig_peptide 335109..335240 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /note="Signal peptide predicted for CMS0302 by SignalP 2.0 HMM (Signal peptide probability 0.913) with cleavage site probability 0.505 between residues 44 and 45" misc_feature order(335166..335225,335328..335396,335454..335522, 335580..335648,335667..335735,335763..335819, 335880..335948,336066..336134,336243..336311, 336321..336377) /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /note="10 probable transmembrane helices predicted for CMS0302 by TMHMM2.0 at aa 20-39, 74-96, 116-138, 158-180,187-209, 219-237, 258-280, 320-342, 379-401 and 405-423" misc_feature 335325..336383 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /inference="protein motif:HMMPfam:PF00344" /note="HMMPfam hit to PF00344, SecY protein, score 1.6e-182" misc_feature 335325..335384 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /note="PS00755 Protein secY signature 1." misc_feature 335640..335696 /gene="secY" /locus_tag="CMS_0302" /old_locus_tag="CMS0302" /note="PS00756 Protein secY signature 2." gene 336428..337030 /gene="adk" /locus_tag="CMS_0303" /old_locus_tag="CMS0303" /db_xref="GeneID:6156281" CDS 336428..337030 /gene="adk" /locus_tag="CMS_0303" /old_locus_tag="CMS0303" /EC_number="2.7.4.3" /note="essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="YP_001709085.1" /db_xref="GI:170780753" /db_xref="GeneID:6156281" /translation="MTRLLIVGPPGAGKGTQAKRIAADRGIPDVSTGDIFRQNIKDRT ELGQQVQALVDAGNYVPDELTNRLVTVRLQEEDAQAGFLLDGYPRTLAQVAYLEELLQ GWGQELDAVIQLVADEDEVVARLTRRAAEQGRADDGEDEIRHRQEVYVRETSPLIDVY REHGLLVEVDGLGEVDEVAERIRTALAARGVRPSSDAGRA" misc_feature 336443..336922 /gene="adk" /locus_tag="CMS_0303" /old_locus_tag="CMS0303" /inference="protein motif:HMMPfam:PF00406" /note="HMMPfam hit to PF00406, Adenylate kinase, score 7.4e-65" misc_feature 336671..336706 /gene="adk" /locus_tag="CMS_0303" /old_locus_tag="CMS0303" /note="PS00113 Adenylate kinase signature." gene 337035..337871 /locus_tag="CMS_0304" /old_locus_tag="CMS0304" /db_xref="GeneID:6156282" CDS 337035..337871 /locus_tag="CMS_0304" /old_locus_tag="CMS0304" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="YP_001709086.1" /db_xref="GI:170780754" /db_xref="GeneID:6156282" /translation="MGALRRTPGIYKTPDEIRRMVAPGLATAASLDAVRELIAPGITT GELDAAADAAIRALGGHSNFQLVPGYRHTVCVSVNDEVVHGIPGDRVLQPGDIVSVDS GAEIDGWNGDSAMTVVVPDPARPDVVEARERLSRVTEDSLWAGIARLATASYLNEVGE AVEESVEAAGAFSIVMDYTGHGIGRSMHEDPPIFNYRVRGKGPAVKPGLVVAIEPMIT DGEAETRVLDDDWTVATVDGSMASHWEHSVAVHARGIWVLTLADGGASRLVPLGITPV AP" misc_feature 337077..337814 /locus_tag="CMS_0304" /old_locus_tag="CMS0304" /inference="protein motif:HMMPfam:PF00557" /note="HMMPfam hit to PF00557, Peptidase M24, score 2.8e-46" misc_feature 337566..337622 /locus_tag="CMS_0304" /old_locus_tag="CMS0304" /note="PS00680 Methionine aminopeptidase subfamily 1 signature." gene complement(337920..339899) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /db_xref="GeneID:6156283" CDS complement(337920..339899) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /codon_start=1 /transl_table=11 /product="putative PTS system antitermination regulator" /protein_id="YP_001709087.1" /db_xref="GI:170780755" /db_xref="GeneID:6156283" /translation="MLSENQERLLDYLSTADRWVEAGELADRLGVTTRSVRNYVTAVR ERSTVAIASSPDGYRIDAGSYARHLGTRSGADQQGTPRDRLHALVRRLGDAPDGLDVF ALADELHVSESTVEADLRKVRALVEDAGLALRRTGSIAVLEGSERDFRRLLSRMFRDE SAQGFLPLETVQREFASDSLRAFKTDLVRELTEGGFFVNEYGVDNVLLHVAIAVDRLA RSPRRTDAGADPSAGADLDPAPAADDAAEGPAAADPTALAIRAVLARLLAAHFDVPVP AGDVAYLALLVRTRVVTPGNEQSLATVMREHVVESDLDVVRAIVRRVKQEYLVDLEDE DFTVRFSLHLGNLVARAADRSFSRNPLARSIKTSYPMTYEIAVFIASEVQRRRGIAIN DDEIAYIALHVGSHRERIARRDDRVACALVCPNYYDLHQIMRQRIEQALGADISVDAV VTRTDVDADALGVQLVINATGTRPPGDDVVVVQPLPTPDDIESIRQAVARVRRHARRS SMKHDLLRFLDESLFFRDLHAPDEEAMIRLLGGKMVEQGIIEPEYIDGAIERERLSST AFTDTLAVPHSLAMTAHRTAIAIVVNDEAMQWGGNRVHVVALVAFSASGRTSFQHVFD QFVEVFSDHRDVQAIMRASGSHGSFIEELVHVMDT" misc_feature complement(337932..338354) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /inference="protein motif:HMMPfam:PF00359" /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, score 1.1e-05" misc_feature complement(338682..338951) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /inference="protein motif:HMMPfam:PF00874" /note="HMMPfam hit to PF00874, Transcriptional antiterminator bglG, score 1.8e-11" misc_feature complement(339540..339605) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /note="Predicted helix-turn-helix motif with score 1547.000, SD 4.46 at aa 99-120, sequence LDVFALADELHVSESTVEADLR" misc_feature complement(339605..339777) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /note="Predicted helix-turn-helix motif with score 1547.000, SD 4.46 at aa 99-41, sequence TAVRERSTVAIASSPDGYRIDAGSYARHLGTRSGADQQGTPRDRLHALVRRLGDAPD GL" misc_feature complement(339777..339842) /gene="licR" /locus_tag="CMS_0305" /old_locus_tag="CMS0305" /note="Predicted helix-turn-helix motif with score 1547.000, SD 4.46 at aa 20-41, sequence VEAGELADRLGVTTRSVRNYVT" gene 340111..340491 /locus_tag="CMS_0306" /old_locus_tag="CMS0306" /db_xref="GeneID:6158791" CDS 340111..340491 /locus_tag="CMS_0306" /old_locus_tag="CMS0306" /codon_start=1 /transl_table=11 /product="putative PTS system sugar-binding IIB component" /protein_id="YP_001709088.1" /db_xref="GI:170780756" /db_xref="GeneID:6158791" /translation="MTGRILVVCGSGASSTFLAQRLRALAEADGLEIEAVAGSIAQVR VDAAGMDVVLLGAHLADRLDAVREAAADEGATAVLLDADAARPEGARAALDRAVAAMR QGARSLRLAPGLHGRPVGGSPPGA" misc_feature 340120..340407 /locus_tag="CMS_0306" /old_locus_tag="CMS0306" /inference="protein motif:HMMPfam:PF02302" /note="HMMPfam hit to PF02302, Phosphotransferase system,lactose/cellobiose-specific IIB subunit, score 6.9e-09" gene 340603..340869 /gene="ptsH" /locus_tag="CMS_0307" /old_locus_tag="CMS0307" /db_xref="GeneID:6156284" CDS 340603..340869 /gene="ptsH" /locus_tag="CMS_0307" /old_locus_tag="CMS0307" /codon_start=1 /transl_table=11 /product="putative phosphocarrier protein HPr component (histidine-containing protein)" /protein_id="YP_001709089.1" /db_xref="GI:170780757" /db_xref="GeneID:6156284" /translation="MAERTVTIASSHGLHARPASLFTQAAAKAGIPVQLAKGDRSVNA ASILGVISLGVDTGDEVVVSAEGENAEQVVTDLATLLESDLDAA" misc_feature 340603..340854 /gene="ptsH" /locus_tag="CMS_0307" /old_locus_tag="CMS0307" /inference="protein motif:HMMPfam:PF00381" /note="HMMPfam hit to PF00381, Phosphocarrier HPr protein,score 3e-19" misc_feature 340639..340662 /gene="ptsH" /locus_tag="CMS_0307" /old_locus_tag="CMS0307" /note="PS00369 PTS HPR component histidine phosphorylation site signature." gene 340932..342536 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /db_xref="GeneID:6158890" CDS 340932..342536 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /EC_number="2.7.3.9" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase" /protein_id="YP_001709090.1" /db_xref="GI:170780758" /db_xref="GeneID:6158890" /translation="MPDPLPEPADTPSTLTADEERIRVSASLAATAADIRIRGEKAGG AAKDVLEAQAFMAEDPTLVDDITARLATGRTAERAVHEAFAGFRDLLLSMGGYMGERA TDLDDVSQRVVAHLQGVAAPGVPDPDHAFVLVARDLAPADTALLDLDKVLALITTDGG PTSHTAILAREKAIVAVVGVAEAKDLADGETVVVDALTGAVTVAPTPAEESAARDAIA ARKARVDVPTGPGALSDGTTIPLLANLGSADGAADAVEKGAEGVGLFRTEFLFLDATS APTVDEQREHYTRLLEAFPGKKVVVRALDAGADKPLSFLNDADEENPALGLRGLRALR ANEQILRDQLTALAQADAATDADLWVMAPMVSTVEEARYFTALGRELGLTTVGVMVEV PSSALLADRILANADFASIGTNDLTQYTLAADRLLGSVAAFQDPWHPAVLRLVQEVGT AGRELGKPVGICGEAAADPLLAVVLVGLGATSLSMSPAALADVRAELALHTREEAEAL AAVALAADSAVEARAAVTAASAPATV" misc_feature 340935..341237 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /inference="protein motif:HMMPfam:PF05524" /note="HMMPfam hit to PF05524, PEP-utilising enzyme,N-terminal, score 9.5e-08" misc_feature 341286..341528 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /inference="protein motif:HMMPfam:PF00391" /note="HMMPfam hit to PF00391, PEP-utilising enzyme,mobile region, score 1.9e-22" misc_feature 341406..341441 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /note="PS00370 PEP-utilizing enzymes phosphorylation site signature." misc_feature 341589..342437 /gene="ptsI" /locus_tag="CMS_0308" /old_locus_tag="CMS0308" /inference="protein motif:HMMPfam:PF02896" /note="HMMPfam hit to PF02896, PEP-utilizing enzyme, score 8.5e-87" gene 342666..344195 /gene="mtlA" /locus_tag="CMS_0309" /old_locus_tag="CMS0309" /db_xref="GeneID:6158892" CDS 342666..344195 /gene="mtlA" /locus_tag="CMS_0309" /old_locus_tag="CMS0309" /EC_number="2.7.1.69" /codon_start=1 /transl_table=11 /product="PTS system, phosphotransferase enzyme II, ABC component" /protein_id="YP_001709091.1" /db_xref="GI:170780759" /db_xref="GeneID:6158892" /translation="MTTTSPTRSTGQSVRLGVQKFGTFLSGMIMPNIAAFIAWGLLTA LFIPTGYLPNADIATLIAPILFFMLPLLIANTGGRMVYDTRGGVVATIATMGVIVGTI GEPYYDGGSPMFLGAMITGPLAAYLLKVIERLWIDRIRPGFEMLVNNFSAGILGAVFA VGAYFGLTPVIRAITSVLGGGVGFLVDNNLLPLTSIVIEPAKVLFLNNAINQGILTPL GTAESLEKGKSILFLLEANPGPGLGVLLAFAIFGAGAARSTAPGAILIQFVGGIHEIY FPYVLSRPLLFLAVIAGGASGVATNVAFGSGLRAPASPGSIIAVLGQTASDSFLGVIL SVIISASVTFVVAAVILRTGKKSDGDFGAAVQATQANKGKESSILSGLGAETGTAGTV GGLADGASSTGTDGGTATATRIQDIVFACDAGMGSSAMGASVLRNKMKKAGLTEVTVV NKAIAALDGTADLVITQRELTDRARQKSPSSEHVSVDNFMNSPRYDEIVELVRKQRSD S" misc_feature order(342738..342806,342834..342902,342921..342974, 343002..343058,343119..343187,343353..343421, 343440..343508,343521..343589,343650..343718) /gene="mtlA" /locus_tag="CMS_0309" /old_locus_tag="CMS0309" /note="9 probable transmembrane helices predicted for CMS0309 by TMHMM2.0 at aa 25-47, 57-79, 86-103, 113-131,152-174, 230-252, 259-281, 286-308 and 329-351" misc_feature 342741..343547 /gene="mtlA" /locus_tag="CMS_0309" /old_locus_tag="CMS0309" /inference="protein motif:HMMPfam:PF02378" /note="HMMPfam hit to PF02378, Phosphotransferase system,EIIC, score 4.7e-06" misc_feature 343911..344177 /gene="mtlA" /locus_tag="CMS_0309" /old_locus_tag="CMS0309" /inference="protein motif:HMMPfam:PF02302" /note="HMMPfam hit to PF02302, Phosphotransferase system,lactose/cellobiose-specific IIB subunit, score 5.8e-14" gene 344305..344742 /gene="mtlF" /locus_tag="CMS_0310" /old_locus_tag="CMS0310" /db_xref="GeneID:6158826" CDS 344305..344742 /gene="mtlF" /locus_tag="CMS_0310" /old_locus_tag="CMS0310" /EC_number="2.7.1.69" /codon_start=1 /transl_table=11 /product="PTS system, phosphotransferase enzyme II, A component" /protein_id="YP_001709092.1" /db_xref="GI:170780760" /db_xref="GeneID:6158826" /translation="MSNVLEPAQIRVGGIASSVEEAIAEAAGILVAAGAVTPEYQGYM LEREKSVSTYMGNLLAIPHGTNEGKDTILDSALSFVRYDAPIDWAGNEVRFVVGIAGK DGGHLEILSKIAIIFSDDDEVQKLLDAPDAEALYALLAEVNEA" misc_feature 344311..344730 /gene="mtlF" /locus_tag="CMS_0310" /old_locus_tag="CMS0310" /inference="protein motif:HMMPfam:PF00359" /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, score 1.6e-41" misc_feature 344446..344496 /gene="mtlF" /locus_tag="CMS_0310" /old_locus_tag="CMS0310" /note="PS00372 PTS EIIA domains phosphorylation site signature 2." gene 344739..345908 /gene="mtlD" /locus_tag="CMS_0311" /old_locus_tag="CMS0311" /db_xref="GeneID:6158828" CDS 344739..345908 /gene="mtlD" /locus_tag="CMS_0311" /old_locus_tag="CMS0311" /EC_number="1.1.1.17" /codon_start=1 /transl_table=11 /product="mannitol-1-phosphate 5-dehydrogenase" /protein_id="YP_001709093.1" /db_xref="GI:170780761" /db_xref="GeneID:6158828" /translation="MKAVHFGAGNIGRGFVGLILHEAGYEVVFADVNAELIGHLASAD SYRVTEVGPHARDWTVTGFRAIDSAADGEALIAEIATADVVTTAVGPNILRFVAPAIA AGLRARSADLGPVAVMACENAINATDTLRDEIAKALGDETDALGRAVFANTAVDRIVP NQDPAAGLDVTVEDFSEWVVERTPFGDAVPDIAGATFVDDLAPYIERKLFTVNTGHAT VAYHGYARGAVSQSDAMAIPEVADEVRQVLEETSALLVAKHGLDESEQAAYREKNLAR FANAALADTVERVGRQPLRKLSREERFVGPASQLAERGLPHDALVRAVGQALRFDPAG DPQALELQGLLATDTAADLVRRVTGLDDQHPLTPDLVAVVDAAQADRRSAPRHRA" misc_feature 344739..345848 /gene="mtlD" /locus_tag="CMS_0311" /old_locus_tag="CMS0311" /inference="protein motif:HMMPfam:PF01232" /note="HMMPfam hit to PF01232, Mannitol dehydrogenase,score 1.3e-102" gene 346161..346382 /gene="infA" /locus_tag="CMS_0312" /old_locus_tag="CMS0312" /db_xref="GeneID:6158827" CDS 346161..346382 /gene="infA" /locus_tag="CMS_0312" /old_locus_tag="CMS0312" /note="stimulates the activities of the other two initiation factors, IF-2 and IF-3" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="YP_001709094.1" /db_xref="GI:170780762" /db_xref="GeneID:6158827" /translation="MAKKDGVIEIEGGVVEALPNAMFRVELSNGHKVLAHISGKMRQH YIRILPEDRVIVELSPYDLTRGRIVYRYK" misc_feature 346167..346379 /gene="infA" /locus_tag="CMS_0312" /old_locus_tag="CMS0312" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 1e-10" gene 346455..346568 /gene="rpmJ" /locus_tag="CMS_0313" /old_locus_tag="CMS0313" /db_xref="GeneID:6158770" CDS 346455..346568 /gene="rpmJ" /locus_tag="CMS_0313" /old_locus_tag="CMS0313" /note="smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L36" /protein_id="YP_001709095.1" /db_xref="GI:170780763" /db_xref="GeneID:6158770" /translation="MKVNPSVKRICEKCKVIRRNGRVRVICENPRHKQVQG" misc_feature 346455..346565 /gene="rpmJ" /locus_tag="CMS_0313" /old_locus_tag="CMS0313" /inference="protein motif:HMMPfam:PF00444" /note="HMMPfam hit to PF00444, Ribosomal protein L36,score 1e-16" misc_feature 346485..346562 /gene="rpmJ" /locus_tag="CMS_0313" /old_locus_tag="CMS0313" /note="PS00828 Ribosomal protein L36 signature." gene 346724..347098 /gene="rpsM" /locus_tag="CMS_0314" /old_locus_tag="CMS0314" /db_xref="GeneID:6156285" CDS 346724..347098 /gene="rpsM" /locus_tag="CMS_0314" /old_locus_tag="CMS0314" /note="located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S13" /protein_id="YP_001709096.1" /db_xref="GI:170780764" /db_xref="GeneID:6156285" /translation="MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKNIR VKDLSDDQLIALRDYIEGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQR TKTNARTRKGPKRTVAGKKKAR" misc_feature 346730..347050 /gene="rpsM" /locus_tag="CMS_0314" /old_locus_tag="CMS0314" /inference="protein motif:HMMPfam:PF00416" /note="HMMPfam hit to PF00416, Ribosomal protein S13,score 3.1e-53" gene 347144..347542 /locus_tag="CMS_0315" /old_locus_tag="CMS0315" /db_xref="GeneID:6156286" CDS 347144..347542 /locus_tag="CMS_0315" /old_locus_tag="CMS0315" /note="located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S11" /protein_id="YP_001709097.1" /db_xref="GI:170780765" /db_xref="GeneID:6156286" /translation="MAAPKSAVRKPRRKDKKNIAVGQAHIKSTFNNTIVSITDPTGAV ISWASSGVVGYNGSRKSTPFAAQLAAESAARQAQEHGMKKVDVFVKGPGSGRETAIRS LQAAGLEVGSINDVTPQAHNGCRPPKRRRV" misc_feature 347207..347536 /locus_tag="CMS_0315" /old_locus_tag="CMS0315" /inference="protein motif:HMMPfam:PF00411" /note="HMMPfam hit to PF00411, Ribosomal protein S11,score 1.4e-65" misc_feature 347441..347509 /locus_tag="CMS_0315" /old_locus_tag="CMS0315" /note="PS00054 Ribosomal protein S11 signature." gene 347704..348699 /locus_tag="CMS_0316" /old_locus_tag="CMS0316" /db_xref="GeneID:6156287" CDS 347704..348699 /locus_tag="CMS_0316" /old_locus_tag="CMS0316" /note="catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit alpha" /protein_id="YP_001709098.1" /db_xref="GI:170780766" /db_xref="GeneID:6156287" /translation="MLIAQRPTLTEESISEFRSRFVIEPLEPGFGYTLGNSLRRTLLS SIPGAAVTSIRIDGVLHEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQGA GQVTAADISAPAGVEIHNPELVIATLNEKAKFELELTIERGRGYVSATQNRSEFSEAG QIPVDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLTEL FGLARELNSAAEGIEIGPAPVDAVLSSELSMPIEDLDLSVRSYNCLKREGIHNVSELV ALSETQLMNIRNFGQKSVDEVKDKLVELGLSLKDAVPGFDGAHYYSYDEDETTTN" misc_feature 347737..348375 /locus_tag="CMS_0316" /old_locus_tag="CMS0316" /inference="protein motif:HMMPfam:PF01193" /note="HMMPfam hit to PF01193, RNA polymerase,dimerisation, score 6.9e-17" misc_feature 347863..348210 /locus_tag="CMS_0316" /old_locus_tag="CMS0316" /inference="protein motif:HMMPfam:PF01000" /note="HMMPfam hit to PF01000, RNA polymerase, insert,score 2.3e-53" misc_feature 348421..348612 /locus_tag="CMS_0316" /old_locus_tag="CMS0316" /inference="protein motif:HMMPfam:PF03118" /note="HMMPfam hit to PF03118, RNA polymerase, alpha subunit, C-terminal, score 3.5e-29" gene 348752..349315 /gene="rplQ" /locus_tag="CMS_0317" /old_locus_tag="CMS0317" /db_xref="GeneID:6156288" CDS 348752..349315 /gene="rplQ" /locus_tag="CMS_0317" /old_locus_tag="CMS0317" /note="is a component of the macrolide binding site in the peptidyl transferase center" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L17" /protein_id="YP_001709099.1" /db_xref="GI:170780767" /db_xref="GeneID:6156288" /translation="MPKPTKGPRLGGGPAHERLMLANLAQSLFEHKSIKTTETKAKRL RPVAERLVTFAKRGDLHARRRVMGIIPSKSVVHELFTEIAPLVAERDGGYTRITKLGF RKGDNAPMVQIELVLEPVTPKVRSSRTSTATAPVAAAPVAEAPAEESDVPVEETDAVE HTDETPAETTDAAAAEVEADAAEKSDK" misc_feature 348809..349099 /gene="rplQ" /locus_tag="CMS_0317" /old_locus_tag="CMS0317" /inference="protein motif:HMMPfam:PF01196" /note="HMMPfam hit to PF01196, Ribosomal protein L17,score 4.6e-45" misc_feature 348851..348919 /gene="rplQ" /locus_tag="CMS_0317" /old_locus_tag="CMS0317" /note="PS01167 Ribosomal protein L17 signature." gene 349435..350505 /locus_tag="CMS_0318" /old_locus_tag="CMS0318" /db_xref="GeneID:6156289" CDS 349435..350505 /locus_tag="CMS_0318" /old_locus_tag="CMS0318" /codon_start=1 /transl_table=11 /product="putative N-acetyltransferase" /protein_id="YP_001709100.1" /db_xref="GI:170780768" /db_xref="GeneID:6156289" /translation="MPDDPSSSAPIPLPEGPDGITWRPMAHADVDALVELQGLLADAD HPDHRPTRDEVVMSMGFSYVDLARDAIVAFDADGRLAAEGSAIVKPDDETVVRGHISG GVRPDLRRRGIGGRLLDWQIARATQALEVAQPADHIEGPVPTRIGVEFPDDSAGATAL ATSRGFTPSRYFIEMHRDLRAEFPDVPAPERLRLIPVSRDWWERTRLAKNDVFRDHWG SEPISVERWEAFLSLSTARDDLSVIAVTGDDDDAQVAGFAMTEIHPQNWEAAGYSSAY VALVGVRREFRGRRLAQALLSAALAAFRAEGLDRAVLDVDSDSPTGALGLYEHLGFTQ ASRSAVYEREVGMTRPRGSAAR" misc_feature 350170..350433 /locus_tag="CMS_0318" /old_locus_tag="CMS0318" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.6e-14" gene 350535..351506 /gene="truA" /locus_tag="CMS_0319" /old_locus_tag="CMS0319" /db_xref="GeneID:6156290" CDS 350535..351506 /gene="truA" /locus_tag="CMS_0319" /old_locus_tag="CMS0319" /note="mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="YP_001709101.1" /db_xref="GI:170780769" /db_xref="GeneID:6156290" /translation="MRLRLDVAYDGTGFAGWAKQPGLRTVQGSLEDALAQLLARTPPA PTLVVAGRTDAGVHATGQVAHLDLTEAQIASLDRPPRGRAAEATAGEGQHVPTAARAA SALARRLNGVLGARSDVVVLACAPAPDGFDARFSATWRAYRYRVADADGPRDPLQRHR TVEVPVALDAAVLQEAADALLGLHDFAAYCKPREGASTIRTLQELTWIRAADGALEAV VRADAFCHSMVRALVGACVAAASGRVPVARLRELLELRERTSEFTVMPARGLVLERVG YPRDEELAARNEITRARRAAHEVDPIVEGAAAAARDLARIRDTPGIA" misc_feature 350547..350942 /gene="truA" /locus_tag="CMS_0319" /old_locus_tag="CMS0319" /inference="protein motif:HMMPfam:PF01416" /note="HMMPfam hit to PF01416, tRNA pseudouridine synthase, score 7.5e-24" misc_feature 351060..351368 /gene="truA" /locus_tag="CMS_0319" /old_locus_tag="CMS0319" /inference="protein motif:HMMPfam:PF01416" /note="HMMPfam hit to PF01416, tRNA pseudouridine synthase, score 1.1e-20" gene 351585..352103 /gene="rplM" /locus_tag="CMS_0320" /old_locus_tag="CMS0320" /db_xref="GeneID:6156291" CDS 351585..352103 /gene="rplM" /locus_tag="CMS_0320" /old_locus_tag="CMS0320" /note="in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /protein_id="YP_001709102.1" /db_xref="GI:170780770" /db_xref="GeneID:6156291" /translation="MRSHRTPTERDPRPSHLEKKAVRSMTRTYSPKASEVQHDWVVID ATDIVLGRLASHAAALLRGKHKATFAPHMDMGDFVIIVNAEKVALTGQKLEKKLAYRH SGYPGGLTATTYVEMLEKHPTRAVEKAIRGMLPKNSLGAAQLKKLKVYAGPEHPHAAQ QPTPYTLGQVAQ" misc_feature 351702..352085 /gene="rplM" /locus_tag="CMS_0320" /old_locus_tag="CMS0320" /inference="protein motif:HMMPfam:PF00572" /note="HMMPfam hit to PF00572, Ribosomal protein L13,score 1.7e-72" misc_feature 351972..352040 /gene="rplM" /locus_tag="CMS_0320" /old_locus_tag="CMS0320" /note="PS00783 Ribosomal protein L13 signature." gene 352154..352639 /gene="rpsI" /locus_tag="CMS_0321" /old_locus_tag="CMS0321" /db_xref="GeneID:6156292" CDS 352154..352639 /gene="rpsI" /locus_tag="CMS_0321" /old_locus_tag="CMS0321" /note="forms a direct contact with the tRNA during translation" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9" /protein_id="YP_001709103.1" /db_xref="GI:170780771" /db_xref="GeneID:6156292" /translation="MAQISDSLDVAPESFSTETPNEEAPKAPRAVLNVSGGAVGRRKQ ATARVRLVPGSGSITVNGREFADYFPNKLHQQLVNDPFKVLDLLGSYDVVARISGGGP SGQAGALRLGIARALNEIDEENNRAVLKKNGFLSRDARVKERKKAGLKKARKAPQFSK R" misc_feature 352271..352636 /gene="rpsI" /locus_tag="CMS_0321" /old_locus_tag="CMS0321" /inference="protein motif:HMMPfam:PF00380" /note="HMMPfam hit to PF00380, Ribosomal protein S9, score 2.2e-54" misc_feature 352448..352504 /gene="rpsI" /locus_tag="CMS_0321" /old_locus_tag="CMS0321" /note="PS00360 Ribosomal protein S9 signature." gene 352663..354012 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /db_xref="GeneID:6156293" CDS 352663..354012 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /note="catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="YP_001709104.1" /db_xref="GI:170780772" /db_xref="GeneID:6156293" /translation="MPRLFGTDGVRGLANGETITADLALRLAQAAAHVLGQDARDAGR RPVAVVARDPRVSGEFIAAAVAAGLASSGVDVFDAGVIPTPATAYLIADFDADFGVMI SASHNPAPDNGIKFFAAGGRKLADELEDRIEAQLSQPVLLPTGADVGRIRRFADAEDR YVLHLLGTLQHRLDGIHVVLDCAHGAAAGISPEVSTDAGARVTVIGNDPDGMNINDRV GSTHLDLLAEAVLGHGADVGIAYDGDADRCLAVDHTGAIIDGDQIMAVLALSMARRGL LVERTLVATVMSNLGLRIAMAENDITVLQTRVGDRYVLEAMNEGGYSLGGEQSGHLVI AEHATTGDGILTGIQLLGEMAATGRSLHELASVMTVYPQVMINVRGVDRERVSDDAEL NAAVARAEAELGDTGRILMRASGTEPMIRVMVEAADQATAERHAQELAALVTERLAI" misc_feature 352666..353091 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /inference="protein motif:HMMPfam:PF02878" /note="HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, score 2.3e-55" misc_feature 352957..353001 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /note="PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature." misc_feature 353137..353433 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /inference="protein motif:HMMPfam:PF02879" /note="HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, score 1.6e-23" misc_feature 353437..353775 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /inference="protein motif:HMMPfam:PF02880" /note="HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, score 2.4e-23" misc_feature 353785..353997 /gene="glmM" /locus_tag="CMS_0322" /old_locus_tag="CMS0322" /inference="protein motif:HMMPfam:PF00408" /note="HMMPfam hit to PF00408,Phosphoglucomutase/phosphomannomutase C terminal, score 4e-06" gene complement(354009..354971) /locus_tag="CMS_0323" /old_locus_tag="CMS0323" /db_xref="GeneID:6156294" CDS complement(354009..354971) /locus_tag="CMS_0323" /old_locus_tag="CMS0323" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709105.1" /db_xref="GI:170780773" /db_xref="GeneID:6156294" /translation="MTHANAPFAPAGRVRLARLIVEDGWSVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRIGYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature complement(354033..354575) /locus_tag="CMS_0323" /old_locus_tag="CMS0323" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-42" misc_feature complement(354834..354899) /locus_tag="CMS_0323" /old_locus_tag="CMS0323" /note="Predicted helix-turn-helix motif with score 1388.000, SD 3.91 at aa 25-46, sequence WSVRRAAERFQCSPATASRWAR" gene 355170..356132 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /db_xref="GeneID:6156295" CDS 355170..356132 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709106.1" /db_xref="GI:170780774" /db_xref="GeneID:6156295" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 355242..355307 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 355307..355428 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 355428..355493 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 355578..356120 /locus_tag="CMS_0324" /old_locus_tag="CMS0324" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 356199..356639 /locus_tag="CMS_0325" /old_locus_tag="CMS0325" /db_xref="GeneID:6156296" CDS 356199..356639 /locus_tag="CMS_0325" /old_locus_tag="CMS0325" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709107.1" /db_xref="GI:170780775" /db_xref="GeneID:6156296" /translation="MPTFRTRVMQARVNATGLPVPPEALDELGAGKRPAVVVTVAGHT YRTSVGAMGGQALIPLSAAHRAASGVAADDEVEVTIELDAAPRDAVVPDEVAAAFAAE PALAEAFRALSSSRQRALVDPIGEAKTDETRQRRVEKALAALRG" gene complement(356668..356904) /locus_tag="CMS_0326" /old_locus_tag="CMS0326" /db_xref="GeneID:6156297" CDS complement(356668..356904) /locus_tag="CMS_0326" /old_locus_tag="CMS0326" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709108.1" /db_xref="GI:170780776" /db_xref="GeneID:6156297" /translation="MGADDDAPTGVHCRLDELLAARGMTLTRLSAIVGVSQVNLSVLK NDRARAIRYSTLVAVCRALECEVGDLLVLDPPAA" misc_feature complement(356695..356862) /locus_tag="CMS_0326" /old_locus_tag="CMS0326" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 4.8e-06" misc_feature complement(356770..356835) /locus_tag="CMS_0326" /old_locus_tag="CMS0326" /note="Predicted helix-turn-helix motif with score 1623.000, SD 4.71 at aa 24-45, sequence MTLTRLSAIVGVSQVNLSVLKN" gene complement(356904..357500) /locus_tag="CMS_0327" /old_locus_tag="CMS0327" /db_xref="GeneID:6156298" CDS complement(356904..357500) /locus_tag="CMS_0327" /old_locus_tag="CMS0327" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709109.1" /db_xref="GI:170780777" /db_xref="GeneID:6156298" /translation="MTRGVLRAAIAIALLVLLAVATAAVVSAVETVRTGVVHTSLEMR GSLPAEADAGPADLRAGAYRTAEVAVGELSGGIVALHVVRIALDASVDIALAGTVAIL ARRLLRPDPLARRLSLVVTLAGGTVMIAALLSLAARTGVAWMVGDALNDPDTGLDGFW PVIAEVDASTIALGFALMIVGLVVEHGETLQRDTRGLV" sig_peptide complement(356904..356987) /locus_tag="CMS_0327" /old_locus_tag="CMS0327" /note="Signal peptide predicted for CMS0327 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.887 between residues 28 and 29" misc_feature complement(order(356949..357017,357087..357155, 357192..357260,357414..357482)) /locus_tag="CMS_0327" /old_locus_tag="CMS0327" /note="4 probable transmembrane helices predicted for CMS0327 by TMHMM2.0 at aa 7-29, 81-103, 116-138 and 162-184" gene complement(357629..358009) /locus_tag="CMS_0328" /old_locus_tag="CMS0328" /db_xref="GeneID:6156299" CDS complement(357629..358009) /locus_tag="CMS_0328" /old_locus_tag="CMS0328" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709110.1" /db_xref="GI:170780778" /db_xref="GeneID:6156299" /translation="MTEDDLAELLRQCVRNNEKTGLTGLLLHRDGKFMQVLEGPHDAV ESVFDAIEADPRHTDVRLLLDEEIPARQFPAWSMGFRTVDDATLRQLRGYDDFLDRPA SAAARPNAPSRARWLLEWFRTHPA" misc_feature complement(357770..358009) /locus_tag="CMS_0328" /old_locus_tag="CMS0328" /inference="protein motif:HMMPfam:PF04940" /note="HMMPfam hit to PF04940, BLUF, score 5.4e-15" gene complement(358507..359301) /locus_tag="CMS_0329" /old_locus_tag="CMS0329" /db_xref="GeneID:6156300" CDS complement(358507..359301) /locus_tag="CMS_0329" /old_locus_tag="CMS0329" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709111.1" /db_xref="GI:170780779" /db_xref="GeneID:6156300" /translation="MARWSSPRRERSLRRSTPGGSHMDHDDPNGYDIAAPDIVPAAAS RVDVRPSLLPRDDSDPYRYGIFLRPDPRTCRAVTVITDQIRAQYGLVSAGAFPPHATL IGSQPFGHDEARVVAAVTELLADRPAFPVHNAGVREHGFGFVYDVDERPDGSKNTELL ALAADIDRVAAPFRRPMESPERHSFDPVRFRAHLSLASHDLLVRPDLHDEVGAFIREL DEPVPTGFVGDTVVMYRTASPDWSGRWWTTLTWEHVRTWTLGGTAG" gene complement(359396..360423) /locus_tag="CMS_0330" /old_locus_tag="CMS0330" /pseudo /db_xref="GeneID:6156301" misc_feature complement(359404..360231) /locus_tag="CMS_0330" /old_locus_tag="CMS0330" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.00093" /pseudo misc_feature complement(360325..360402) /locus_tag="CMS_0330" /old_locus_tag="CMS0330" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 7.8e-08" /pseudo gene complement(360610..360948) /locus_tag="CMS_0331" /old_locus_tag="CMS0331" /db_xref="GeneID:6156302" CDS complement(360610..360948) /locus_tag="CMS_0331" /old_locus_tag="CMS0331" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709112.1" /db_xref="GI:170780780" /db_xref="GeneID:6156302" /translation="MLSSPDRDDDLLQERLRALHDVWPGDPADDDPLRETRRATAAAD ADRTTAPRPPGLLGLACRAILHRLGASATGLPLPPRVDPAPAADPAPRADPAPAADAP PIERRPPARP" gene 361289..362263 /locus_tag="CMS_0332" /old_locus_tag="CMS0332" /db_xref="GeneID:6156303" CDS 361289..362263 /locus_tag="CMS_0332" /old_locus_tag="CMS0332" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709113.1" /db_xref="GI:170780781" /db_xref="GeneID:6156303" /translation="MAVGAAALLAVVVGSLPAAAAAPFQVVGYAEGGSTPVSRLDASA AALTSVVVDGVNVTSDGRGVAAPSPEAIALLRQAHARGERVELLVGNYDEALGDFSPG IADALLGSTANVDRVVQQLAAEVGTRGWDGVTVDLESLSGAHPAGLTRLVAGLKAALG SARSVSVCLMATTGDYRPLGYDLPALGRAADHVVLMAYDQHGPTWSAAGPVGGMPWVK AALVPVRKAVPAARIQLGIAGYGYTWPRTGEGRQLSDQGARDLVASQERTAVWSAQQQ EWRATLRDGTVVWWSDARSYDARVALAEQLGLGGVAVWSLGLSDPLTR" sig_peptide 361289..361378 /locus_tag="CMS_0332" /old_locus_tag="CMS0332" /note="Signal peptide predicted for CMS0332 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.361 between residues 30 and 31" misc_feature 361307..361375 /locus_tag="CMS_0332" /old_locus_tag="CMS0332" /note="1 probable transmembrane helix predicted for CMS0332 by TMHMM2.0 at aa 7-29" misc_feature 361358..362245 /locus_tag="CMS_0332" /old_locus_tag="CMS0332" /inference="protein motif:HMMPfam:PF00704" /note="HMMPfam hit to PF00704, Glycoside hydrolase, family 18, score 5.4e-09" gene 362260..363288 /locus_tag="CMS_0333" /old_locus_tag="CMS0333" /db_xref="GeneID:6156304" CDS 362260..363288 /locus_tag="CMS_0333" /old_locus_tag="CMS0333" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709114.1" /db_xref="GI:170780782" /db_xref="GeneID:6156304" /translation="MTRGVGTGGAGPAGVWRVRELRLERIHREVAVRIAGGRVTLADP ADEVLGRLDLSISDGVVDRHVHLGLVDRAALAGSPVTAVVDLGWDPAEIARIAARPPT GVDVRYAGPFHTALGGYPSDRAWAPSAAVREVARAEDAAAAVAEARAGGSGAVKIVLH DGGQLLADGVLAALVDAAHDAGLPAAVHAEGAGQAARAIRAGADVLVHVPWTERLDDA TLRASATRDVLWISTLAIHDGADLATALDNARRYVALGGRVAYGTDLGNGDLPVGLNA REVELLGEVGLRGPALLEAVLGSAPGVIAHGLASPDPLPSSVEATAAQLVAWLRGAHR LGPADLPG" gene 363507..364277 /locus_tag="CMS_0334" /old_locus_tag="CMS0334" /db_xref="GeneID:6156305" CDS 363507..364277 /locus_tag="CMS_0334" /old_locus_tag="CMS0334" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709115.1" /db_xref="GI:170780783" /db_xref="GeneID:6156305" /translation="MTRISELLLPALSLPGVAARVGEFLYRRADASGDIHPDDAARGT VEGPDSDRIAVVGETGMISLGVRTHQISLPAFLARHHATRTGRGVDWSIAPLPSSRLR EAPAVIARAEGDLAGADAVVLLAGITDVLRVTSTRAWRRHMRGALDALRVHVPGEAWI LVADIPPLDNAGSLSRPARVAAGAHAQALNRHTREVVDGLPFTRAVTFPDELTRALWR PEGEESRYQRTYRSWGAHLSEALVDARGGVSAAGAPAA" misc_feature 364002..364031 /locus_tag="CMS_0334" /old_locus_tag="CMS0334" /note="PS00152 ATP synthase alpha and beta subunits signature." misc_feature 364080..364112 /locus_tag="CMS_0334" /old_locus_tag="CMS0334" /note="PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature." gene 364308..365240 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /db_xref="GeneID:6156306" CDS 364308..365240 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /codon_start=1 /transl_table=11 /product="putative ABC-transport protein, ATP-binding component" /protein_id="YP_001709116.1" /db_xref="GI:170780784" /db_xref="GeneID:6156306" /translation="MRLTSPIVTSLASTAPIARAGNRDPVPGSPAASALEARDITVAY GDTEVVHGAGLEIRPGCVTALVGPNGSGKSTLLRTMARLQAARSGSLVLREESTGGAG EHESDALDLSLRRFARRVALLTQGRPTPGGLSVRDVVEFGRYPHRGRFGGADPEGRAA VDRALDLTGLAALADRGVDQLSGGQLQRVWLASCLAQETGVLLLDEPTTYLDLRYQVE LLDLVRDLADDASIAVGVVLHDLDQAAALADTVALLSDGRIVKTGTPSEVLTPDLLTE VYGIPVEVHADPTTGSLRTRAVARHHHRNERLHP" sig_peptide 364308..364418 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /note="Signal peptide predicted for CMS0335 by SignalP 2.0 HMM (Signal peptide probability 0.962) with cleavage site probability 0.276 between residues 37 and 38" misc_feature 364485..365078 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.1e-41" misc_feature 364506..364529 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 364848..364892 /locus_tag="CMS_0335" /old_locus_tag="CMS0335" /note="PS00211 ABC transporters family signature." gene 365237..366226 /locus_tag="CMS_0336" /old_locus_tag="CMS0336" /db_xref="GeneID:6156307" CDS 365237..366226 /locus_tag="CMS_0336" /old_locus_tag="CMS0336" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport lipoprotein" /protein_id="YP_001709117.1" /db_xref="GI:170780785" /db_xref="GeneID:6156307" /translation="MITRRRTLAMTALAAATALTLTACGTTEEASTGAGATPAGEQIT LTDGTGAEVTLDGPATKVVGTEWNVVENLVSLGVDPVGVADVAGYSAWSSAVPLVNEP ADIGTRGEPSVETIASLAPDLIVATTDLPADAITQLKAIAPVLQVESADGSKQIQQSE DNLELIAKATGTEDKATEVIGAYDQAVTDAKAKLDAAGLAGSKFLFADAYVDAGAVTI RPFGKGSLIGDVTTELGLENAWTGEVDPAYGLGSTDVEGLTTIGDVQFLYNSNSTQGD DPFASTLAGNAVWKSLPFVTAGDVHRMPDGIWAFGGPASMTAYAKAVSDLLAG" sig_peptide 365237..365326 /locus_tag="CMS_0336" /old_locus_tag="CMS0336" /note="Signal peptide predicted for CMS0336 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.778 between residues 30 and 31" misc_feature 365276..365308 /locus_tag="CMS_0336" /old_locus_tag="CMS0336" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 365408..366157 /locus_tag="CMS_0336" /old_locus_tag="CMS0336" /inference="protein motif:HMMPfam:PF01497" /note="HMMPfam hit to PF01497, Periplasmic binding protein, score 9.8e-24" gene 366241..368397 /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /db_xref="GeneID:6156308" CDS 366241..368397 /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /note="part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome" /codon_start=1 /transl_table=11 /product="iron-hydroxamate transporter permease subunit" /protein_id="YP_001709118.1" /db_xref="GI:170780786" /db_xref="GeneID:6156308" /translation="MTAPVRTAPPSADAPPASAAAAAMPDPVPSLAAVARADGAGRIP VRAVAVVGALALLVAVLAVIDVTQGTAAVGPREVWDALTGRATPGDASVVVASRLPRM AAGILVGLALGAAGAALQTVSRNVLASPDTLAVNAGAYAALAVAAVTGLTLPVLAGAG VAFVGGLVAAAVVLAVSGLGSGTVRLVLAGSALALGLGSVTSALLLLFPEQTSGLYRW GQGGIGQNGFDAVAQMAPVVVVALGILLVITRRLDALGLGDDAARSLGVHVRSTRVVA VLASVLLAASAVTVAGPIGFVGLYAPAFVRPLRRLVPGVRRSWVFIPVAGLMGAAVVL LADVLLRAVVGAEASVAVPTGLVTSLIGAIVLVVLAVRTRDSATSAPTERHGVVTRRR VALVVGALVAVLVGLLVAAVLLGDAKLLLGDVVNGIRGTAGPVVSYVLDTRVPRVLAA VLAGAALALAGVLVQAVTRNPLADPAILGVSGGAGLGAVLFVTTAPLASGWGIAGAAG LGALAAAAVVFGLAARGGFPQNRLVLIGVGVSAGTAAAISMIIVLTDPFDGAKALTWL SGSTYGRGFDDALPVLAALALAVAVAAPRHRMLDLVALDDDTPRLLGVSLGRARLLAL TIAVVLTATAVAAVGVIGFVGLVAPHAARALVGSRHARVLPVAILLGAALVTLADLLG RTAIAPGQLGAGLVTALVGTPYFVWLLWRGRAARGR" sig_peptide 366241..366351 /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /note="Signal peptide predicted for CMS0337 by SignalP 2.0 HMM (Signal peptide probability 0.923) with cleavage site probability 0.372 between residues 37 and 38" misc_feature order(366364..366432,366547..366606,366649..366717, 366721..366789,366799..366867,366928..366987, 367063..367131,367192..367260,367288..367356, 367417..367485,367579..367632,367666..367734, 367747..367815,367834..367902,368113..368181, 368218..368286,368296..368364) /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /note="17 probable transmembrane helices predicted for CMS0337 by TMHMM2.0 at aa 42-64, 103-122, 137-159,161-183, 187-209, 230-249, 275-297, 318-340, 350-372,393-415, 447-464, 476-498, 503-525, 532-554, 625-647,660-682 and 686-708" misc_feature 366445..367356 /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 2.2e-61" misc_feature 367483..368373 /locus_tag="CMS_0337" /old_locus_tag="CMS0337" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 1.1e-79" gene 369396..370919 /locus_tag="CMS_0338" /old_locus_tag="CMS0338" /db_xref="GeneID:6156309" CDS 369396..370919 /locus_tag="CMS_0338" /old_locus_tag="CMS0338" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001709119.1" /db_xref="GI:170780787" /db_xref="GeneID:6156309" /translation="MNETPPTTEAESTPVPPEDLPAAPADADDRADVDAGDATRPPAL PRRRSFYADAWRHLPRDLGYLALTALLLATVYFALPTAVYSLFDSLLWSASGIFAAVA LLAALFAARGLGAVERVRIGWAEPRPIRPVDWTPRWQQNRAMRILSAVANPHYWLHLL HAVVVYPLVSFVTLGAGALLVAGFLGPIGGGIAILGYGWRFEELLVERGYDAGRTFAL AGVLGVTAMILSVVLLPLWGRGAVLAHYWTDHALLGGFKSDVLERRVQGLEQSRAGAV TAEGQTLRQIERDLHDGPQQRLVRLRMDLAAAERALDTDPERARTLIAEASEHAHDTL EELRALSRGFAPPILLDRGLVAALEALASRSTVPVALDVHLPENLVLPTEVERNVYFT VSELLTNVAKHSGATRADVTLVLMRDFDGTRILVARVTDDGQGGASVREGHGLEGLVG RIGALDGDVSISSPQGGPTRITARVPLLTLNGVPTDGSAGAGPAAGGPVAASPDPAA" misc_feature order(369579..369647,369660..369728,369834..369902, 369915..369983,370041..370109) /locus_tag="CMS_0338" /old_locus_tag="CMS0338" /note="5 probable transmembrane helices predicted for CMS0338 by TMHMM2.0 at aa 62-84, 89-111, 147-169, 174-196 and 216-238" misc_feature 370239..370442 /locus_tag="CMS_0338" /old_locus_tag="CMS0338" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase, score 2e-13" misc_feature 370545..370829 /locus_tag="CMS_0338" /old_locus_tag="CMS0338" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 8.7e-07" gene 370916..371608 /locus_tag="CMS_0339" /old_locus_tag="CMS0339" /db_xref="GeneID:6156310" CDS 370916..371608 /locus_tag="CMS_0339" /old_locus_tag="CMS0339" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001709120.1" /db_xref="GI:170780788" /db_xref="GeneID:6156310" /translation="MSIPIATLGTMDDAPDAARIRAVVVDDAVLLREGLARVLVEAGI DVVAQHADAQGFLAALADDAPDVVVMDVRMPPTFSDEGIRATVEARRRVPGIGVLLLS QYVEAAYAEEVFRSGTAGIGYLLKDRVTRLEEIDDAVRRVASGGTVLDPEVVTQLMAR RRDPLTALTPREREVLGLMAEGRTNAAIARALVIGTGAIEKHVTSIFSKLGLEDTGED HRRVLAVLAYLG" misc_feature 370973..371356 /locus_tag="CMS_0339" /old_locus_tag="CMS0339" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.3e-11" misc_feature 371408..371596 /locus_tag="CMS_0339" /old_locus_tag="CMS0339" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 1.2e-12" gene complement(371625..372827) /locus_tag="CMS_0340" /old_locus_tag="CMS0340" /db_xref="GeneID:6156311" CDS complement(371625..372827) /locus_tag="CMS_0340" /old_locus_tag="CMS0340" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709121.1" /db_xref="GI:170780789" /db_xref="GeneID:6156311" /translation="MQRSRVPRGGPVHRGNGTIMRASRLFSTRPALRGLLLCVVGALI TGSGILGIVSALHQGDVRDALTDGAGVTAEGTLTEVVTLHSSTHRTRYSDTEHCPRYA FTAADGSRQTVLDRTQCSDRADDFTTGSTIPVLYDPADPKVAIIDTPGARGSSRSGLL FAIPMTLLGLGLLIAAPSAVRRARRNRAAEDAARAEMPVLGGEPTAYPEVAAAAAVAS AAGTGSETDVSVTERFARRVASGLDGTPFMVEPCPDGFRVGFALADARWWSILQYSDV RDSITYTVRVDERKNRFRIDDTLRTLSWSAGATGMVPRLGVSSSIRSGRIRYGRIIQL GLDPGGVLTAFSPDAERARIVETGRSLGLRPGAGRSTLIGLWAAGGAIGLCIIGASTA LLIIALTG" sig_peptide complement(371625..371789) /locus_tag="CMS_0340" /old_locus_tag="CMS0340" /note="Signal peptide predicted for CMS0340 by SignalP 2.0 HMM (Signal peptide probability 0.965) with cleavage site probability 0.737 between residues 55 and 56" misc_feature complement(order(371640..371708,372288..372356, 372660..372728)) /locus_tag="CMS_0340" /old_locus_tag="CMS0340" /note="3 probable transmembrane helices predicted for CMS0340 by TMHMM2.0 at aa 34-56, 158-180 and 374-396" gene 373126..373638 /locus_tag="CMS_0341" /old_locus_tag="CMS0341" /db_xref="GeneID:6156312" CDS 373126..373638 /locus_tag="CMS_0341" /old_locus_tag="CMS0341" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709122.1" /db_xref="GI:170780790" /db_xref="GeneID:6156312" /translation="MSWQINGLPLHPLIVHFVVVAFPTAALLILVSALWPAFARRLGI ITPLVALASLIAVPLATSSGENLEEKVGANPVLEVHTELGDTLLPWAVAVFVVAVAQW LWIRRLAAQEPRRPGRDARPIPRSRHVAVTAVLAVAVAVSSVGAIVTTVRIGESGARA VWSDSAAGGD" misc_feature order(373162..373230,373249..373317,373381..373449, 373510..373578) /locus_tag="CMS_0341" /old_locus_tag="CMS0341" /note="4 probable transmembrane helices predicted for CMS0341 by TMHMM2.0 at aa 44-66, 73-95, 117-139 and 160-182" gene 373687..374091 /locus_tag="CMS_0342" /old_locus_tag="CMS0342" /db_xref="GeneID:6156313" CDS 373687..374091 /locus_tag="CMS_0342" /old_locus_tag="CMS0342" /codon_start=1 /transl_table=11 /product="putative tautomerase" /protein_id="YP_001709123.1" /db_xref="GI:170780791" /db_xref="GeneID:6156313" /translation="MPLIRIDLVEGRPDTQITAIGDVLMRTLVDVYGLPERDRFQIVT EHAPGRLTALDVGLGIERSEQVVIIQIFTQAGRSTEEKQEFFRVLADSLAEVGVAGED LVIGFVENTAADWSFGFGRAQYVTGELQKPGS" misc_feature 373690..373869 /locus_tag="CMS_0342" /old_locus_tag="CMS0342" /inference="protein motif:HMMPfam:PF01361" /note="HMMPfam hit to PF01361, 4-oxalocrotonate tautomerase, score 2.8e-07" misc_feature 373888..374058 /locus_tag="CMS_0342" /old_locus_tag="CMS0342" /inference="protein motif:HMMPfam:PF01361" /note="HMMPfam hit to PF01361, 4-oxalocrotonate tautomerase, score 0.056" gene complement(374115..374627) /locus_tag="CMS_0343" /old_locus_tag="CMS0343" /db_xref="GeneID:6156314" CDS complement(374115..374627) /locus_tag="CMS_0343" /old_locus_tag="CMS0343" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001709124.1" /db_xref="GI:170780792" /db_xref="GeneID:6156314" /translation="MTTRIRLATTADLDALQRIEDAADRLLVDLLRPEDWPPAPSGVS RAAEPGFLLVAEDAAEADGPLVGFAHVLEIDDLAHLEQVSVPPEHGRRGHGGALVEAS ADEARGRGHRRITLRTFADVPWNAPAYARAGFVEEEPATPFHLALVETEARLGLDRLG RRIQMGRELG" misc_feature complement(374223..374459) /locus_tag="CMS_0343" /old_locus_tag="CMS0343" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.2e-13" gene complement(374659..375741) /locus_tag="CMS_0344" /old_locus_tag="CMS0344" /db_xref="GeneID:6156315" CDS complement(374659..375741) /locus_tag="CMS_0344" /old_locus_tag="CMS0344" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709125.1" /db_xref="GI:170780793" /db_xref="GeneID:6156315" /translation="MDDERDPGLAAAVADSLGRPVAALEGVVREPLEYDAFLAHRSVT RIRGRARLDDGRALPWTLVEKRTEGPTLAVPYLVDNGARELAAYRSGLLDALPPGIRA PRAHGTLRDASGGVTLWIEEVRHLGPRPLDRAALLDAAAALGALGGQWLGRAPEDPWL FTGWIDRHAQPEAGADGMRMLAAPGPAARARLGARIPAAARLLAGQDRVRRVLEALPR TLCHHDATGANVFRDAGGIVLIDWESVGPGPVGADLASLLCSSVRRGDASAADVAAVL DEAVDRYAQGIRSTGPDAPTDLVRLGLDASMALRWKLAADLVAALDAGSAPRRGSLPG EPAEVAMEELASLLDLVLRAAARALA" gene complement(375787..377481) /locus_tag="CMS_0345" /old_locus_tag="CMS0345" /db_xref="GeneID:6156316" CDS complement(375787..377481) /locus_tag="CMS_0345" /old_locus_tag="CMS0345" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family hydrolase" /protein_id="YP_001709126.1" /db_xref="GI:170780794" /db_xref="GeneID:6156316" /translation="MPPTSHAHALDIAKPGRLPRGGLRVTPLGGLGDVGRNMTLFEYE GELLIVDCGVLFPEESQPGINVILPDFSTLRGRLDKITGIVLTHGHEDHIGGVPYLLQ ERPDIPVIGSRLTLAFISAKLEEHKIKPVTRQVKEGDRIDAGKFNLEFVAVNHSIPDG LAVAIRTGAGMVLHTGDFKMDQFPMDRRLTDLGAFARLGEEGVDLFLTDSTNAEVPGF TTAEKDLTPAIEKVFRTAPKRIVVSSFASHVHRIQQVLDSAEQYGRKVSFVGRSMVRN MKIASDLGYLRIPKGLVIDLKALNKLPDDKVTLICTGSQGEPMAALSRMARREHIIEV GEGDTILLASSLIPGNENAIYGVINGLIRWGADVVHKGNAKVHVSGHASAGELVYCYN LVKPRNVLPVHGEWRHLVANAALAESTGVKNALVIEDGVSVDLVNGRASISGRVPAPY VFVDGMTIGVATEEALEERRTLAAEGQITVLGIFDEKEQKLIHPAELITRGFVEHEGW IPEAEAAISTALKNAAAKRHLDGVAAERAMSDGLQRWLQRRHRRTPVVTVIVVDAD" misc_feature complement(376261..376380) /locus_tag="CMS_0345" /old_locus_tag="CMS0345" /inference="protein motif:HMMPfam:PF07521" /note="HMMPfam hit to PF07521, RNA-metabolising metallo-beta-lactamase, score 7.8e-14" misc_feature complement(376747..377379) /locus_tag="CMS_0345" /old_locus_tag="CMS0345" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 4.1e-26" gene 377975..379507 /locus_tag="CMS_0346" /old_locus_tag="CMS0346" /db_xref="GeneID:6156317" CDS 377975..379507 /locus_tag="CMS_0346" /old_locus_tag="CMS0346" /codon_start=1 /transl_table=11 /product="putative integral membrane sulphate transporter" /protein_id="YP_001709127.1" /db_xref="GI:170780795" /db_xref="GeneID:6156317" /translation="MASGTSTPTVPAPPVRQPSPTVLQALRSPRLLSREVLAGLVVAL ALIPETISFSIIAGVDPRVGLFSSFVMAVAIAFLGGRPAMITAATGAVALVVAPIVRD HGLDYLIATVILGGLLQIVLGLLGVAKLMRFIPRSVMVGFVNALAILIFSAQIPNLVG VPWLVYPLVAGGIAIIVVMPRITKVVPAPLVAIVVITVAVVVTALAVPTVGDQGALPD SLPTLFIPDVPLTFDTLRIIAPYALALALVGILESLMTAKLVDDITDTPSRKTRETLG QGGANILSGLFGGMGGCAMIGQTMINVKASGARTRISTFLAGVFLLILVVGLGDVVAT IPMAALVAVMIMVSVGTFDWHSIRPSTLRRMPVGETLVMVLTVIVVVLTDNLAIGVII GVIASMIVFARRVAHFATVERTERTDEDGAPVAHYAVIGELFFASSNDLTTQFDYAGD PERVVIDMTGSHVWDASTVAALDAITYKYERHGKRAVISGMNASSAAMHGRLAGELGA GH" misc_feature order(378080..378148,378167..378235,378293..378352, 378371..378439,378449..378508,378527..378595, 378683..378751,378809..378877,378905..378958, 378977..379045,379088..379156) /locus_tag="CMS_0346" /old_locus_tag="CMS0346" /note="11 probable transmembrane helices predicted for CMS0346 by TMHMM2.0 at aa 36-58, 65-87, 107-126, 133-155,159-178, 185-207, 237-259, 279-301, 311-328, 335-357 and 372-394" misc_feature 378338..379189 /locus_tag="CMS_0346" /old_locus_tag="CMS0346" /inference="protein motif:HMMPfam:PF00916" /note="HMMPfam hit to PF00916, Sulphate transporter, score 7.8e-105" misc_feature 379205..379498 /locus_tag="CMS_0346" /old_locus_tag="CMS0346" /inference="protein motif:HMMPfam:PF01740" /note="HMMPfam hit to PF01740, Sulfate transporter/antisigma-factor antagonist STAS, score 0.022" gene complement(379662..379853) /locus_tag="CMS_0347" /old_locus_tag="CMS0347" /db_xref="GeneID:6156318" CDS complement(379662..379853) /locus_tag="CMS_0347" /old_locus_tag="CMS0347" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709128.1" /db_xref="GI:170780796" /db_xref="GeneID:6156318" /translation="MPEDRDGAGREERRRRVEDAAHSGEMEGLHLTPSTSEDAGEYVA GRIDATELRERVRARYGIG" gene 379969..381348 /locus_tag="CMS_0348" /old_locus_tag="CMS0348" /db_xref="GeneID:6156319" CDS 379969..381348 /locus_tag="CMS_0348" /old_locus_tag="CMS0348" /codon_start=1 /transl_table=11 /product="putative aldehyde dehydrogenase" /protein_id="YP_001709129.1" /db_xref="GI:170780797" /db_xref="GeneID:6156319" /translation="MSSYAVTDPTTGETVAVHPEITDAELQEAVARAEGAYRGWSRRT SIAERAALVARVAELHVERRDELARIIVREMGKPLDQALGEVDFAADIHAYYARNVEE FLADEAIELADGTGSAFVRRSGLGVLLGIMPWNFPYYQVARFAAPAIVTGNAILLKHA PQCPESAEAIQRMFADAAAELGADPGVYVTVLATNAQIEGVIADPRVQGVSVTGSERA GAAVAEIAGRHLKKVVLELGGSDPFILLSTDDLDASVQDAVAARLDNNGQSCNGAKRF LVIDHLYEEFAARFTAQLTAAQPADPMSDGTVLGPLSSRAATERLTEQLSRAVAQGAT FLASGEPDGNLFPPAVLADVTPEMDAYREEFFGPVAALYRVHSEEEAVALANDTPFGL GSYVYTTDPEQALRVADGIDAGMVWINLVLGDAAELPFGGVKRSGSGRELGRHAVDEF ANRKLIRIA" misc_feature 379969..381342 /locus_tag="CMS_0348" /old_locus_tag="CMS0348" /inference="protein motif:HMMPfam:PF00171" /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase,score 1.8e-107" misc_feature 380755..380790 /locus_tag="CMS_0348" /old_locus_tag="CMS0348" /note="PS00070 Aldehyde dehydrogenases cysteine active site." gene complement(381221..382498) /locus_tag="CMS_0349" /old_locus_tag="CMS0349" /db_xref="GeneID:6156320" CDS complement(381221..382498) /locus_tag="CMS_0349" /old_locus_tag="CMS0349" /note="Suspiciously late stop codon" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709130.1" /db_xref="GI:170780798" /db_xref="GeneID:6156320" /translation="MIAMFVRVIPGQHRALLELLEEGRFDAVLSESAFTGVAPYVALA RAERLPVLGLATTPVTLTSVDAAPFGAALPPGRGPLGHLRDRALTAAIRPGLTRPLRR AVDAVLAEIGAAPSRTDTFDFPYLCFDELFQLSVPALEYPRRELPDTVRFVGPLRAAP GSAHDTALPDWWSDLQDGRPVVHVTQGTIDNADPGRLIAPTLRALADEDVLVVATTGG RPVEELEREFGGPIPANARVAEFVSHDLLLPLCDAVVTNGGFGGVQRMLAHGLPLVVA GSTEDKPEVAARVAWAGCGRDLRTGKPRPSAIRRAMRDVLTTPSYRAQPGARHRDRRA PGCGGRHRRGAGRRGRGASGSPGGAGGAHRITGVAGVPVRTLSSAAPPRVTRCGSASG SRTRRPRAGRARGPSPSASRRRRAARPRRRARG" gene complement(382847..383149) /locus_tag="CMS_0350" /old_locus_tag="CMS0350" /db_xref="GeneID:6156321" CDS complement(382847..383149) /locus_tag="CMS_0350" /old_locus_tag="CMS0350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709131.1" /db_xref="GI:170780799" /db_xref="GeneID:6156321" /translation="MRIRSMWTDRLPSSRPWVRCSRPTAVPAVPRTRSPRMRRPLQPS LPLACAVAVLGSVCVVALAFGASLVAGTVRLHALVHADPDADPFAGPFAPAPASAG" sig_peptide complement(382847..383035) /locus_tag="CMS_0350" /old_locus_tag="CMS0350" /note="Signal peptide predicted for CMS0350 by SignalP 2.0 HMM (Signal peptide probability 0.798) with cleavage site probability 0.792 between residues 63 and 64" misc_feature complement(382943..383011) /locus_tag="CMS_0350" /old_locus_tag="CMS0350" /note="1 probable transmembrane helix predicted for CMS0350 by TMHMM2.0 at aa 47-69" gene 383239..384447 /locus_tag="CMS_0351" /old_locus_tag="CMS0351" /db_xref="GeneID:6156322" CDS 383239..384447 /locus_tag="CMS_0351" /old_locus_tag="CMS0351" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /protein_id="YP_001709132.1" /db_xref="GI:170780800" /db_xref="GeneID:6156322" /translation="MAAMVEVTTAPIDEIRGQRTSIKWTRFPADVLPLFVAEMDYAIA EPVVEELVRRVRASDVGYLDGPGPLAPAFARFARERWGWIVDESRVRIATDVSVGIVE TLRLAVPRGGRVVVTPPVYPPFFELVEEAGARVEEVPLLVSDGRASLDLTGLERAFAS GVDAFLLCNPHNPMGIVHDARTLAAVARLAARHDVLVISDEVHAPLTLPGATFTPFAP LAESLGASSVCVTSASKGWNLAGAKCSLVIAGDPRTHALLDGLVEEVACRTSILGLHA NVAAFSCTDWLDDAIARIVANDRLLASLLAEHLPGVVHHRPAAGYLAWLDLRPLGLGA DPAAVLLERARVALNAGHCYGTGGAGHARLNLACDPDVLREAVRRIAAAVGAAAASTP VAAPAPAATH" misc_feature 383461..384390 /locus_tag="CMS_0351" /old_locus_tag="CMS0351" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 4.6e-07" gene 384459..385646 /locus_tag="CMS_0352" /old_locus_tag="CMS0352" /db_xref="GeneID:6156323" CDS 384459..385646 /locus_tag="CMS_0352" /old_locus_tag="CMS0352" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="YP_001709133.1" /db_xref="GI:170780801" /db_xref="GeneID:6156323" /translation="MTDRILTTHAGSLPRTPELTRLLVARDQRRAFDQDELAELTASA VADTVRKQLETGLDIVNDGEVPRVGFSTYVLERIDGFGGAGHRKPTLDSIKFPEYAAF QAKQIVEGADVACVWDPPVAQGLLEYDPALAGITEDLDGFARELAVQAGRGLAPAGTF FSAATPGIVSTTLLLDAANPHYGDDRAYVFALADQLKLEYDAIVARGHTLQLDAPDLA MERVIQFGDATLEEFLAAVDLHVDALNHAIRDIPREKVRLHVCWGNWQGPHQDDVPVE VLLPHLYRARVGAFSIPLGNPAHQHEAPSFRGHPLPEGAVLIPGVVDVTTNYLEHPQV IANRILEVVDAVGDPARVIAGTDCGLSTFASYEFVATDVAWAKLAALVEGAAIASRRV LGS" misc_feature 384471..385619 /locus_tag="CMS_0352" /old_locus_tag="CMS0352" /inference="protein motif:HMMPfam:PF01717" /note="HMMPfam hit to PF01717, Methionine synthase,vitamin-B12 independent, score 0.0034" gene 385733..387031 /locus_tag="CMS_0353" /old_locus_tag="CMS0353" /db_xref="GeneID:6156324" CDS 385733..387031 /locus_tag="CMS_0353" /old_locus_tag="CMS0353" /EC_number="2.5.1.49" /codon_start=1 /transl_table=11 /product="putative o-acetylhomoserine" /protein_id="YP_001709134.1" /db_xref="GI:170780802" /db_xref="GeneID:6156324" /translation="MHAGSTPDTAHGARVAPVHLSAGFVFDSFAEARDRFAGADEGYL YTRNGNPTTDEVERRLADLEGGTEALLLASGQGATATAMLSILQAGDRILSSRSVYEG NRTLFQGSLGRLGIGVDFVDDHRDLAEWERRITPETRVLFGEPIPNPKNDLLDLAGIA GVAHRHGLPFVVDSTLATPYLLRPIEHGADVVVHSTSKFLAGHGAVLGGVVVDGGSFD WAARPDLFPHLNQPERSFGGASWADRFGRGALAAYAREVVASRFGPTPAPFNAFLLRQ GIETLSLRVERHSANALAVARFLEQRPEVSSVDYAGLESSPSHDLALTYLPDGQGSVF SFTLAGGEPAAEAFTDAVQLFSRMTHLGDVRSLVLHPASTTHAGRTPEERDAAGIWPG LLRVSIGIEDIADILRDLEHGLDAARAVGSGRPSVAARQA" misc_feature 385736..386977 /locus_tag="CMS_0353" /old_locus_tag="CMS0353" /inference="protein motif:HMMPfam:PF01053" /note="HMMPfam hit to PF01053, Cys/Met metabolism pyridoxal-phosphate-dependent enzymes, score 1.1e-148" gene 387109..388482 /locus_tag="CMS_0354" /old_locus_tag="CMS0354" /db_xref="GeneID:6156325" CDS 387109..388482 /locus_tag="CMS_0354" /old_locus_tag="CMS0354" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709135.1" /db_xref="GI:170780803" /db_xref="GeneID:6156325" /translation="MTYVELVWEPQESAHLSRRDRARGTYRAFVPDELATGLPQIGRE AQDAATDALAVLARADERIGRRAGYLNHLLIRSESISSSWIEGNRVTPKRLAIAELLQ QGTRVALDVIANVRATEEAIDALADRERPITVPDIEALQHVIEPSLAEGIRTEQNWVG GSGWSPLRAEFVPPPEGEVRRLLDDLARFCTDTEGNPVVRAAIAHAQFETIHPFIDGN GRTGRALIHTVLRRGDAVRDILIPISTVLASDADAYIAGLTAFRAGRVDEWVRAFAEA AELAAGTAVRLAEDVARLDEESVERLVEHRRKKGLTPARPRADAVVLRVLGRLATDPV LTADSAARTHGVSRVAAHRALTQLADAGVLARNKDQKGRLVCWTADRHLALVALSERS NRVGGGDTAAQRPRHGPPAPDASVLGRLRESQSADLRRQARGQPAPAPQAAPVPAMSR SRRRTAA" misc_feature 387517..387900 /locus_tag="CMS_0354" /old_locus_tag="CMS0354" /inference="protein motif:HMMPfam:PF02661" /note="HMMPfam hit to PF02661, Filamentation induced by cAMP protein Fic, score 1.4e-21" gene complement(388428..389228) /locus_tag="CMS_0355" /old_locus_tag="CMS0355" /db_xref="GeneID:6156326" CDS complement(388428..389228) /locus_tag="CMS_0355" /old_locus_tag="CMS0355" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709136.1" /db_xref="GI:170780804" /db_xref="GeneID:6156326" /translation="MAGRTRRCGAGTIQMSDSDHVAVYDTNDGSGRSDPRRADDGMST VSETADAESAGATLPAGGATGLRERRRMATTTEISEAALALFEQRGMAATTIHDIAQA AGVSDRTCFRYFPSKEESVLTLHPVFDAPLDAWLADVDRGSAPLPQLEAVYERVLATL DGDLSAIAHQQLRVRRLMAAEPQLRSTAVSIDATRSWELAERITTAFGGRITAQEARL VTELAGVAVRAAFDEWADARTAGLDATLVASYAAVRRRLRDIAGTGAA" misc_feature complement(388857..388997) /locus_tag="CMS_0355" /old_locus_tag="CMS0355" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2.3e-13" misc_feature complement(388884..388949) /locus_tag="CMS_0355" /old_locus_tag="CMS0355" /note="Predicted helix-turn-helix motif with score 1770.000, SD 5.22 at aa 94-115, sequence TTIHDIAQAAGVSDRTCFRYFP" gene 389249..390769 /locus_tag="CMS_0356" /old_locus_tag="CMS0356" /db_xref="GeneID:6156327" CDS 389249..390769 /locus_tag="CMS_0356" /old_locus_tag="CMS0356" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709137.1" /db_xref="GI:170780805" /db_xref="GeneID:6156327" /translation="MTTPPSADTRRETLPTTSRAADDRAVAPEDERLPQGAPLVIGLL VVAAFVVILNETIMSVALPSLMADLDITTATAQWLTTGYMLTMAVVIPATGFILQRFS TRQVFGAAMTLFSIGTLIAAIAPGFGVLLLGRIVQASGTAIMMPLLFTTVLNLVPAAR RGRLMGVISIVIAVAPAIGPTVSGLILSSLSWRWMFWIVLPIALIALTLGLWKITNLT TPRKLPFDILSVVLSTLAFGGLIFGLSSLGESAEGDAPLPLWIPITVGVLALAAFITR QVSLQREDRALMDLRTFRSRPFVVAIIMVSVSMMALFGSLIVLPLYLQNVLQLGTLET GLLLLPGGALMAILSPIVGRLFDRVGPRPLVIPGAIVVSIALWGMTTMLHEGTSIGWV IAVHLVLNAGLAFMFTPLLTSALGSLPPRLYSHGSATVSTMQQLAGAAGTALFVTVLT TTTVAGLADGQSEVTATAAGVQAAFMIGGFISLAAIVASFFVRRPAEPVPEGVAAH" misc_feature order(389366..389434,389477..389545,389564..389623, 389651..389719,389738..389806,389816..389884, 389921..389989,390017..390076,390137..390205, 390248..390316,390335..390397,390425..390493, 390554..390622,390650..390718) /locus_tag="CMS_0356" /old_locus_tag="CMS0356" /note="14 probable transmembrane helices predicted for CMS0356 by TMHMM2.0 at aa 40-62, 77-99, 106-125, 135-157,164-186, 190-212, 225-247, 257-276, 297-319, 334-356,363-383, 393-415, 436-458 and 468-490" misc_feature 389378..390598 /locus_tag="CMS_0356" /old_locus_tag="CMS0356" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 390864..391718 /locus_tag="CMS_0357" /old_locus_tag="CMS0357" /db_xref="GeneID:6156328" CDS 390864..391718 /locus_tag="CMS_0357" /old_locus_tag="CMS0357" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709138.1" /db_xref="GI:170780806" /db_xref="GeneID:6156328" /translation="MSDTMEIGVETLAYDLSGDGPLVVLAHGMGDSRRSYRFLVPQLV AAGYRVANFDIRGCGESSTGWSGYSRTDIAGDLVALVRHLGGPAVVVGQSISGGAATI AAADAPDVITGVVELAPFTRAQSADLGGLLRATAHRAATVQLARVLLGGSLAGWMRYL DLAFPTKPADWAAESGRIRASLGRPERMAVLKAMAKTSPADAGARLGDVRCPVLVVEG SADPDWADPRAEGERILADLPAGLGDLAVIDGAGHYPHTETPDAVLALLLPFLGRTFA ATTPGARA" misc_feature 391005..391670 /locus_tag="CMS_0357" /old_locus_tag="CMS0357" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 4.2e-11" gene 391711..392301 /locus_tag="CMS_0358" /old_locus_tag="CMS0358" /db_xref="GeneID:6156329" CDS 391711..392301 /locus_tag="CMS_0358" /old_locus_tag="CMS0358" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709139.1" /db_xref="GI:170780807" /db_xref="GeneID:6156329" /translation="MPRAGLDAATVTEAGAALADEIGLAGLSMGAVAERLGVKTPSLY KHVASLADLQHRIAVLATTEAGDAMRDATQGRAGQEALTGAAHALRDYVTAHPGRYAA TVGARSAGEGDPLDPARARTLDALSAVLHGYRLGEADRIHALRMLRSVLHGFATLEVA DDFQMATDIDVSFGWIVAFLDGGLQATAGGGDARAS" misc_feature 391741..391881 /locus_tag="CMS_0358" /old_locus_tag="CMS0358" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2e-05" misc_feature 391789..391854 /locus_tag="CMS_0358" /old_locus_tag="CMS0358" /note="Predicted helix-turn-helix motif with score 1436.000, SD 4.08 at aa 27-48, sequence LSMGAVAERLGVKTPSLYKHVA" gene complement(392312..393244) /locus_tag="CMS_0359" /old_locus_tag="CMS0359" /db_xref="GeneID:6156330" CDS complement(392312..393244) /locus_tag="CMS_0359" /old_locus_tag="CMS0359" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709140.1" /db_xref="GI:170780808" /db_xref="GeneID:6156330" /translation="MPDFSKLLGAAARALGNASSSSRDGRQQRPVGAPGSGSGTDWRG LVRTAAGHLGGDDTSRAQPTASPHRAATADARPRTSEADRVALGKYDYLLRTADPDQL EQVHRDAFARLTPEQRDLVQARLTEELPAHERPRSGGTDDLARAATRGETAHPGLMQR VFGGGAAGGADSRPGAGPRGGSRMGAFAGGAAAGAGVAALGGLAIAVAGGAAVSSVAG PLLSGALADGVDFAGLAEGFGLEGLTGLTGLTDGIDGVSEGVSGLTEGVDGLAQGGAE HLTGIGDGIGGLGDSVGGLAEGFRIPGLDDLFGR" gene complement(393344..393946) /locus_tag="CMS_0360" /old_locus_tag="CMS0360" /db_xref="GeneID:6156331" CDS complement(393344..393946) /locus_tag="CMS_0360" /old_locus_tag="CMS0360" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709141.1" /db_xref="GI:170780809" /db_xref="GeneID:6156331" /translation="MRRRAEIVAAAVRVFGVRGYGAATIKEIADEVGVSPAAVLRYFR KEELLTEVLRQWDRQQPFVSEAAPGLPALRAFVDLMRYHVEHRGFLELYLTFATETSD ATHPAHEYMRGRYARTIAQIRRRIDEAVALGQVPPMDDATLDYEAACFLAILDGLEIQ WIHNPSLDLPALVGEYVEQSIARWRGGARAAVPPGSASWD" misc_feature complement(393791..393928) /locus_tag="CMS_0360" /old_locus_tag="CMS0360" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 4.5e-14" misc_feature complement(393815..393880) /locus_tag="CMS_0360" /old_locus_tag="CMS0360" /note="Predicted helix-turn-helix motif with score 2056.000, SD 6.19 at aa 23-44, sequence ATIKEIADEVGVSPAAVLRYFR" gene 394206..395306 /locus_tag="CMS_0361" /old_locus_tag="CMS0361" /db_xref="GeneID:6156332" CDS 394206..395306 /locus_tag="CMS_0361" /old_locus_tag="CMS0361" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709142.1" /db_xref="GI:170780810" /db_xref="GeneID:6156332" /translation="MGEEVFGVGLIGAGPVGQAIHLPTLARMADRFRVVHVMDVDADV AERVAARVGARHSTDADALIEDPAVDVVVIGSPNRFHAEQVVAACHAGKRAVLCEKPL AVSAKEGRAIARASAEHGVPVIVGTMHAFDPAWIAAAAAWDASGRAPHTVRISAVIPP NPDSEDSATEIVGRPAPRIVGEPDVEAQALAVTGGVLGLAIHDLPLARRLLPDARPRV VSARALRPWGYEIVAMVGESVLEIHGIGGASWDPEWTLDAIARDRSLHLDFSLSYVHA GSSTATLTNARGTTGWGPYVDNGYLGEWEHVHDVITGAAALVPMEVQLADLDLATDIA EQCAAIIRAGGAVPAATEAGSAADPAPTDVAA" misc_feature 394221..394586 /locus_tag="CMS_0361" /old_locus_tag="CMS0361" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 2.8e-28" gene 395303..396115 /locus_tag="CMS_0362" /old_locus_tag="CMS0362" /db_xref="GeneID:6156333" CDS 395303..396115 /locus_tag="CMS_0362" /old_locus_tag="CMS0362" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709143.1" /db_xref="GI:170780811" /db_xref="GeneID:6156333" /translation="MSALTLRIDPAASATHAHAAVATLASLPESFRRTDDAGDVVVVA GGDGWAGRATGAARSGARALLVLDPGPVDDADLADLAAAGIPVVLDVPWRHDEAVRRV APRIHRLAAPGALFEARATVASTDDLAGSARALALTAKTLVGSPLTELAPLAWTPDHL MLSGTTASGVHVIVSTVVTAHAHACATFRLVVGDRAAHVALPAPGTAAPGRASVTDAA GREDLPVVFESGHRTAMRLARDAAHGRCVPDDVADLRVLLAAAPALAAGARP" gene 396170..397492 /locus_tag="CMS_0363" /old_locus_tag="CMS0363" /db_xref="GeneID:6156334" CDS 396170..397492 /locus_tag="CMS_0363" /old_locus_tag="CMS0363" /codon_start=1 /transl_table=11 /product="putative solute-binding lipoprotein" /protein_id="YP_001709144.1" /db_xref="GI:170780812" /db_xref="GeneID:6156334" /translation="MPQQSSSAFGNGLTRRSLLSAGVGAAAVGLLAACSGGGGGASGA AAPLKFWNMPWGAPAFLTEDKAISAAYKPASGMGKVSYQQVQWANFTQTFSTAVAANN GPAVSSGGGTTAFLFESQGKIAYADDLIETWKGNGIYDDFLPGLVDTLKTANGYAAVP YNLDMRMYWYRKDLLEKAGADVPTDWDSYEAACAALKKIGVYGYGTRSGAGAFTGFHQ IVAHKINNGGGLFDADQNPDVVTDKNIEAVEWVLGMVKNGYVDPRSATYTSDNAYQQM DAGTFGMFWDGAGATANVSPETAAQMVVGDPLVGPGGEKGALYFPNNIMMYKSTPSQE NSEAFLTYYYQNMKSLWTKQTGIGLPPLKSIADEAYADDPNTTKILNDWQPISKTWGA PGSNTVFQNVTKVDGTQPTISFAQAVLAGSVTAKAALETLQKELEAGA" sig_peptide 396170..396298 /locus_tag="CMS_0363" /old_locus_tag="CMS0363" /note="Signal peptide predicted for CMS0363 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.539 between residues 43 and 44" misc_feature 396233..397219 /locus_tag="CMS_0363" /old_locus_tag="CMS0363" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 3e-18" misc_feature 396239..396271 /locus_tag="CMS_0363" /old_locus_tag="CMS0363" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 397544..398530 /locus_tag="CMS_0364" /old_locus_tag="CMS0364" /db_xref="GeneID:6156335" CDS 397544..398530 /locus_tag="CMS_0364" /old_locus_tag="CMS0364" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709145.1" /db_xref="GI:170780813" /db_xref="GeneID:6156335" /translation="MAVDTRVADKIGLARRGVGVAGPGRPPAAPRKGRGKTPLGRAGK TLTLFALPSLLLLVLLNVYPVVYSFLQSLQQGTPSTLPWQTPFVGLENYANVLTSESF RNATTFTIVFTVVGVFGSWLVGLALALLLRTRIPGNGFFKVLLLLPWIVPVVVSATSW NWLVATPQSPVPIILERLGFPDANFLGDPVLAQVVVCVFKVWISFPFMLMMMSSALAS VDTNVYEAAKMDGASAWQAFRGVTLPIISRTTYISWVLMTIFCVNDFPTIFLLTQGGP VNATTSLIVLAYQQAFQNLQTGPATAVAFMMTAVLVIVSTLLYRQIKKADIE" misc_feature order(397676..397744,397868..397936,397970..398038, 398096..398164,398294..398362,398432..398500) /locus_tag="CMS_0364" /old_locus_tag="CMS0364" /note="6 probable transmembrane helices predicted for CMS0364 by TMHMM2.0 at aa 45-67, 109-131, 143-165,185-207, 251-273 and 297-319" misc_feature 397847..398527 /locus_tag="CMS_0364" /old_locus_tag="CMS0364" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.3e-08" misc_feature 398189..398275 /locus_tag="CMS_0364" /old_locus_tag="CMS0364" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 398527..399408 /locus_tag="CMS_0365" /old_locus_tag="CMS0365" /db_xref="GeneID:6156336" CDS 398527..399408 /locus_tag="CMS_0365" /old_locus_tag="CMS0365" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709146.1" /db_xref="GI:170780814" /db_xref="GeneID:6156336" /translation="MSQALAVGGATSATVGDITRRSAKEREQKGQWWRFLFIAIITLI VITPILAVLFLSTQPGQNSTATGFTFENFERVLGGTDVMIWLGNSLIVALVTVVVSVV IAAPAGYVLSRSRSKLVSGYSLVLFVVQALPVVTAAIPLFITFSAMGLINTLQGVAII YIGSTMSVAIWMMAAYIDSIPITLEEAAWMDGASVFSGFIHVVLRNSLPGILSTAIFS FLLAWNDYLIALLFLQDFTKYTLPIGLNTFFQQNAADWGSVMAVAVIMMLPPVLIFAF LNRYFSVGGIGGSLAGR" misc_feature order(398623..398691,398776..398844,398887..398955, 398974..399042,399085..399138,399157..399225, 399292..399360) /locus_tag="CMS_0365" /old_locus_tag="CMS0365" /note="7 probable transmembrane helices predicted for CMS0365 by TMHMM2.0 at aa 33-55, 84-106, 121-143, 150-172,187-204, 211-233 and 256-278" misc_feature 398782..399387 /locus_tag="CMS_0365" /old_locus_tag="CMS0365" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.1e-12" misc_feature 399055..399141 /locus_tag="CMS_0365" /old_locus_tag="CMS0365" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(399486..399830) /locus_tag="CMS_0366" /old_locus_tag="CMS0366" /db_xref="GeneID:6156337" CDS complement(399486..399830) /locus_tag="CMS_0366" /old_locus_tag="CMS0366" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709147.1" /db_xref="GI:170780815" /db_xref="GeneID:6156337" /translation="MAKDPQVPRPTKKSEYTIVFATESARKGWQDLAATIRGPLADTW DFLTRTPTERTPTNYPLKGEELGAVTRDGERHVRWQHKPTARGDARIWFYVEGRTVHL EQVHTRHPNQTK" gene complement(399833..400291) /locus_tag="CMS_0367" /old_locus_tag="CMS0367" /db_xref="GeneID:6156338" CDS complement(399833..400291) /locus_tag="CMS_0367" /old_locus_tag="CMS0367" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709148.1" /db_xref="GI:170780816" /db_xref="GeneID:6156338" /translation="MPLIHGARTTTRRSSDLSKHSADVFAEAEDHPVQVTRRDGETLV LMSQTAADAQAQLLQFAADLITVTLDDEGSLASRMSERFPWMLALSPTDRETCSRELV NAARASFSTGQPHLAIAELTSWRESATAIAAGLASSPVEWLARPTPVERP" gene complement(400301..402187) /locus_tag="CMS_0368" /old_locus_tag="CMS0368" /db_xref="GeneID:6156339" CDS complement(400301..402187) /locus_tag="CMS_0368" /old_locus_tag="CMS0368" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709149.1" /db_xref="GI:170780817" /db_xref="GeneID:6156339" /translation="MTDSTATSGSTAASAIPKPEHPRPQSTRPDWLNLNGPWQFERDR GDSGLERGLLERDLAEEILVPFAPESTASGIGDVDFLTAVWYRRTVRIPAGWSGRRVL LHFGAVDHDATVWVGGEEVARHRGGFTSFTADLGVRADEEELTIVVRARDTRDAPQAR GKQATWFENTACFYTRTTGIWQTVWLEPVPEAHIRSAHIEPQRADSSFTVTPELSHRT AGLAFEAVLADADGEITRARIPAGDLGARVTLRIPESRVREWSPEDPHLYDITLRLVD ASGDDDRVVDEVASYGGLRSISIDGRDVLLNGRRVFQRLVLDQGYWPDTLMTSPDDAA LVRDIELSMAAGFTGARLHQKVFEERFLFHADRLGYLVWGEFGDWGAGGGLGKDAQQP TASFITQWIEAVTRDRSHPSIVGWCPLNETYQPLHDRITQLDDVTAGMYLATKAADPS RPVLDASGYSHRVRSSDVYDSHSYEQDPDAFRREQSGLADGRPFVNDLDGRAISVPYA GQPFFVSEYGGIWWNPEEIDRPQDASDDPARAVSWGYGERVATVEEWHARFRGLTEVL LEDPHMFGYCFTQLTDTFQEQNGIYDFHRRPKFDIARIREVQQRAAYEERDVGGVDFR TRSE" misc_feature complement(400349..401299) /locus_tag="CMS_0368" /old_locus_tag="CMS0368" /inference="protein motif:HMMPfam:PF02836" /note="HMMPfam hit to PF02836, Glycoside hydrolase, family 2, TIM barrel domain, score 0.00044" misc_feature complement(401303..401614) /locus_tag="CMS_0368" /old_locus_tag="CMS0368" /inference="protein motif:HMMPfam:PF00703" /note="HMMPfam hit to PF00703, Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich domain, score 9.1e-05" misc_feature complement(401618..402106) /locus_tag="CMS_0368" /old_locus_tag="CMS0368" /inference="protein motif:HMMPfam:PF02837" /note="HMMPfam hit to PF02837, Glycoside hydrolase, family 2, sugar binding, score 1.5e-38" gene complement(402285..403387) /locus_tag="CMS_0369" /old_locus_tag="CMS0369" /pseudo /db_xref="GeneID:6156340" misc_feature complement(402683..403018) /locus_tag="CMS_0369" /old_locus_tag="CMS0369" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 1.1e-10" /pseudo misc_feature complement(403052..403387) /locus_tag="CMS_0369" /old_locus_tag="CMS0369" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 5.7e-08" /pseudo gene complement(403540..406173) /locus_tag="CMS_0370" /old_locus_tag="CMS0370" /db_xref="GeneID:6156341" CDS complement(403540..406173) /locus_tag="CMS_0370" /old_locus_tag="CMS0370" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709150.1" /db_xref="GI:170780818" /db_xref="GeneID:6156341" /translation="MASVLYRLGSMAARRAWLVIVSWVVILGIGVGSFLAFAGTLGNS FDIPGTASGAVTDELAQTLPDTAGGTGTVVYRTTDGSAFTDQQKQDISALATSAGDLP GVARVVDPFAVTQQRADQAAQLQSGDAQITAGRTQLDAAQQQLDAGKAQLDAGQQQLT AARQQAEAAGAPAAQIAALDAQQAQLDQQTQALQQQQATVDSSRTQLESGAEQAELGR TLLGLTDGIGVVSADGSTAIVNVSFTDPRLELSEETKESAIAHFQDSPVDGTSVDFAT DLAQGVPEIFGIGEVVGLVFAAIVLIVMLGTLIAASLPIVTAVVGVGVGVTASLAFSG VVDMASVTPVLGVMLGLAVGIDYSLFIVNRHRKQMLAGTGVRESIGLANGTSGTAVVF AGSTVIVALLALNITGVPFLALMGTVGAVCVLVAVLVAITLTPAVLGLAGTRVLRKRD RASASRAASAPSPQDAAKALKPMSNARAVLTVVGTVVALLVVAIPSLSMRLGLPDGSS EPAGSTSERAFSTVADEFGEGANGPLLVVADVPAGLADADLLATQVDVAQALHDLDDV VAVAPVANTDDNTVLAFQVLPQEGPNSASTEQLVQDIRALPELDGGITLGVAGQAATN IDISEALAAVLPLYLLVVVGLSLLILIVVFRSILLPLIATGGFVLSLFATYGLIVAVF QFGWGASLIGLENSGPILSFLPVILVGILFGLAMDYQLFLASGMREAYVHGAEARLAV VQGLRAGRAVVTAAALIMVSVFGGFVFSESTIIRSIGFGLAFGVLLDAFVVRMLLMPA LMHLLGRSAWWLPRWLDRILPDVDIEGAALERTHPHAAAASTPAADLPAGLPADGGHG AHAAPPTATTIEAETAAAPRD" sig_peptide complement(403540..403698) /locus_tag="CMS_0370" /old_locus_tag="CMS0370" /note="Signal peptide predicted for CMS0370 by SignalP 2.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.809 between residues 53 and 54" misc_feature complement(order(403789..403857,403870..403938, 403999..404067,404110..404178,404212..404280, 404683..404742,404851..404919,404962..405030, 405091..405159,405169..405237,405250..405318, 406057..406125)) /locus_tag="CMS_0370" /old_locus_tag="CMS0370" /note="12 probable transmembrane helices predicted for CMS0370 by TMHMM2.0 at aa 17-39, 286-308, 313-335,339-361, 382-404, 419-441, 478-497, 632-654, 666-688,703-725, 746-768 and 773-795" gene 406235..406822 /locus_tag="CMS_0371" /old_locus_tag="CMS0371" /db_xref="GeneID:6156342" CDS 406235..406822 /locus_tag="CMS_0371" /old_locus_tag="CMS0371" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709151.1" /db_xref="GI:170780819" /db_xref="GeneID:6156342" /translation="MQVNEHRTGRVRSEAAREAILGATVRLIHAVGYDHLTIEGVAKE AGVGKQTIYRWWPSRGALIAECMTEGRLIPVEFAVPDTGDLLADIERWLTDVLAVLDA PTGGPLVRSLVAAAAEDAAVGDSLSASLGVDRDLSERLASGIRAGQLPADAPVEELGQ AILGVIVLRVLGRQGDHAESVTRLVRFVLGAGASS" misc_feature 406292..406432 /locus_tag="CMS_0371" /old_locus_tag="CMS0371" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 1.3e-13" misc_feature 406340..406405 /locus_tag="CMS_0371" /old_locus_tag="CMS0371" /note="Predicted helix-turn-helix motif with score 2071.000, SD 6.24 at aa 36-57, sequence LTIEGVAKEAGVGKQTIYRWWP" gene complement(406825..408645) /locus_tag="CMS_0372" /old_locus_tag="CMS0372" /db_xref="GeneID:6156343" CDS complement(406825..408645) /locus_tag="CMS_0372" /old_locus_tag="CMS0372" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709152.1" /db_xref="GI:170780820" /db_xref="GeneID:6156343" /translation="MEPPPMADGPVLVFLHGIGDGDKEDTWREHLTRGLAGLGYPDLV GVEVIAPKYSHALFGWDEKTALPGLTIKQPVREAARTNRREFEQRMGALEVRLGHEDP GPGVPFAEAAFSVALRDRRFTQARNYATDPQIRAQVLSLILARIPSEGDIVLVGHSLG SVIAADLLRRLPPEVRVTGFITIGSPLAHGSVNVDKLRDVLQEPPTNLGRWVNFWNFG DPVSAHRGLSSGFPWLIDFRITTHQVLIPAHRAAAYLSHGSVAAAIGFALFGSSSREL AHAETGAAVPLDESEVLTVLALRYGHLTAQRLTGSDRDRFVGALRLVQAAAVAQLKGR NEEEGRPLASAIARLAFDVTDAAAVAPEPVPGQHLTKETAAVVMTVLATENIIRPFEI AVAKADRQRAMEDLTAEMGLSSRFGADVFAAAKEAQDALTGARNGTWLRWGAVGAGAV AIIVATGGLALAAGAGLAGGAALTSALAAFGPGGMIGGLLTAGTLVSAGGGGIAFGLA SPATTAETVESVVQTRLTATILRRRQGLEPDSGIWDLLAQTEIAVRREHERLDEFSDE SSSVLKELTRKIVTIERAMKYLSENGMEPGVVEGVRDQTP" misc_feature complement(order(407152..407220,407239..407307)) /locus_tag="CMS_0372" /old_locus_tag="CMS0372" /note="2 probable transmembrane helices predicted for CMS0372 by TMHMM2.0 at aa 447-469 and 476-498" gene complement(409076..410023) /locus_tag="CMS_0373" /old_locus_tag="CMS0373" /db_xref="GeneID:6156344" CDS complement(409076..410023) /locus_tag="CMS_0373" /old_locus_tag="CMS0373" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709153.1" /db_xref="GI:170780821" /db_xref="GeneID:6156344" /translation="MPDATSTLLTPARSVPDAVPAAARIRPGRDPRTRRPRRHSRGAD LWLALSLAAVLVPLAYLLSVSLMTQGEVSAGVLVPTDPAWQNWTAALTGSGLPRAILN SLATSVIGSVLSLAAALPAAWAMARHRTGGRVLAGLVLSPWLLPPVVAIVPVFTLLRI LSLNNTLVGLTIVYALANVAVAVWLLEGFVRRIPVELDEAAQLDGAGEWRVLVSIVTP LLTPALVSVGVIVAVLDYQEFLFATFLTQGPAAQTFPVVLSLMLGERVQDFGKIAAAS LIGVIPLFAAATLLQRRLVAGLTGGAVEGRGTRRAHASC" misc_feature complement(409124..409738) /locus_tag="CMS_0373" /old_locus_tag="CMS0373" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.6e-09" misc_feature complement(order(409154..409210,409325..409393, 409454..409522,409550..409618,409655..409723, 409823..409891)) /locus_tag="CMS_0373" /old_locus_tag="CMS0373" /note="6 probable transmembrane helices predicted for CMS0373 by TMHMM2.0 at aa 45-67, 101-123, 136-158,168-190, 211-233 and 272-290" gene complement(410016..410921) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /db_xref="GeneID:6156345" CDS complement(410016..410921) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709154.1" /db_xref="GI:170780822" /db_xref="GeneID:6156345" /translation="MTVSLAGSRARCPRSTWPRRVFVAPSVLALVVLGGYPLVFIALA ALTESSLGRPFQEFVGTATFADVLAEGDTTTALVRGVGYALLVTVVSVVLGVGTGVAL WRSVHAGAVVRTLLLLPMITPPVVVGVLWKLVFQPNGGLGDTVVAAVVPGGSAVSVLS QPVTAFLGVALADVWEWTPLIVLLVFAALVGQDPAVEEAAALDGAHGLRLVRSITLPA ISGTVAAVALIRLVLAFKVFDLVYILTSGGPGQATTMPAYLIWQAALQHFDVGRAAVI TLLLAVVVTAVTLPVTAITRRLNRA" sig_peptide complement(410016..410147) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /note="Signal peptide predicted for CMS0374 by SignalP 2.0 HMM (Signal peptide probability 0.757) with cleavage site probability 0.229 between residues 50 and 51" misc_feature complement(410022..410693) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1e-07" misc_feature complement(order(410040..410108,410136..410204, 410223..410291,410334..410402,410421..410489, 410517..410579,410613..410681,410793..410861)) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /note="8 probable transmembrane helices predicted for CMS0374 by TMHMM2.0 at aa 27-49, 87-109, 121-141, 151-173,180-202, 217-239, 246-268 and 278-300" misc_feature complement(410271..410357) /locus_tag="CMS_0374" /old_locus_tag="CMS0374" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(410918..412331) /locus_tag="CMS_0375" /old_locus_tag="CMS0375" /pseudo /db_xref="GeneID:6156346" misc_feature complement(411201..412220) /locus_tag="CMS_0375" /old_locus_tag="CMS0375" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 1.2e-37" /pseudo gene 412525..413967 /locus_tag="CMS_0376" /old_locus_tag="CMS0376" /db_xref="GeneID:6156347" CDS 412525..413967 /locus_tag="CMS_0376" /old_locus_tag="CMS0376" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709155.1" /db_xref="GI:170780823" /db_xref="GeneID:6156347" /translation="MPSRIILNAFDMSCVTHQAPGLWRHPDNEAHRYGDLDYWVDLAR LLERGRFDALFIADVVGVYDVYRHSAAPALEDSAQIPVGDPIVQVSAMAHATEHLGFG VTVASTYELPYALARRFSTLDHFTRGRIGWNVVTSYLDSAARNLGLERQIGHDDRYAI GDEFLDVTYKLWEGSWEDGAVVIDRERGIYTDPAKVHPIAHDGEHFRVPGVHLAEPSP QRTPVVFQAGASPRGREFAAKHGEAVFINGLTPELTRPITDDIRDRAERIGRPRDSVK ILTLATVIVAQTDEEAQAQYDEYRGYVSLDGALALYGGWSGLDLSGYDPDAPLRYVDT DAARSALAIFTRYDPDRDWTPRDIADHVGIGGIGAVIVGSPTTVADELERWIEVAGID GFNLAYVITPGTFEAVVDLLVPELQRRGRVWDEYPEGTLRGRLNGSGSPVVPEWHPAH AYRGAYVGGPSAADDTAPRLSTPPLVPGRS" gene 413969..415204 /locus_tag="CMS_0377" /old_locus_tag="CMS0377" /db_xref="GeneID:6156348" CDS 413969..415204 /locus_tag="CMS_0377" /old_locus_tag="CMS0377" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_001709156.1" /db_xref="GI:170780824" /db_xref="GeneID:6156348" /translation="MTDITDVTDIATRSPWHGHATAEELAHWRGIAEHVAATLAEDAL ARDRAGLDPTAELDLLRDSGLVNLLDPAEHGGGGGHWESAVLAIRVLARADASIAQVL AYHYINSGNLGFTATGDVRADGYRRTIAGRWVWGDSVNPTDPDLRLTPDGDGYQLDGL KRFSTGASAGDVILVNAVVAGGELDGRIVVFALDHDRPGIAYLGDWDALGQRLSASGS VRFTDVRVEPDDVLGVGSDEPFSTLVTPAIQLAFGNLYLGIAEGALAQALDLVRARRG AWFLSGVDAYRDDPFVQRVVGELASRIAAVEALADRVGRAFDGVVDLGDGVTAEIRGR IAIDVAKLKVVATEVGVEVANRVFEVTGSSSARSSTGLDLFWRNVRTHSLHDPVDYKK LEVGAHALTGELQPISLYT" misc_feature 414677..415150 /locus_tag="CMS_0377" /old_locus_tag="CMS0377" /inference="protein motif:HMMPfam:PF00441" /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase,C-terminal, score 0.0001" gene 415201..416325 /locus_tag="CMS_0378" /old_locus_tag="CMS0378" /db_xref="GeneID:6156349" CDS 415201..416325 /locus_tag="CMS_0378" /old_locus_tag="CMS0378" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709157.1" /db_xref="GI:170780825" /db_xref="GeneID:6156349" /translation="MSDAVTSRLDAVLTRLRPVLDRIAEGAVAREREHELPVDELRLL LDAGVAGLRVPVHLGGDGLTIPELAEVLVELAVADSNLPQILRGHVAFVEDRLQAPPG EERDAWLRRFAAGEIVGNAWSEVGSGAIGTSQTKLERRGDGWVLNGRKYYTTGSIFAG WTDVTADRDGEPVTSVVRTDQPGVVISDDWDGFGQQLTGTGTIVFTDAEVDPAHIAPF ADRFRYQTALYQLVLLAVLAGVAVAAERDTAQAVRERTRVYSHGVASLVRDDAQIQAV VGEISSVAYTARLLVRGVAEAVQAAADMAHDPRSEADIQANVLAEIRSAQAQVVLSES VPRAATRVFDTLGASATSRARGLDRHWRNARTVASHNPHI" misc_feature 415879..415932 /locus_tag="CMS_0378" /old_locus_tag="CMS0378" /note="1 probable transmembrane helix predicted for CMS0378 by Phobius" gene 416514..417428 /locus_tag="CMS_0379" /old_locus_tag="CMS0379" /db_xref="GeneID:6156350" CDS 416514..417428 /locus_tag="CMS_0379" /old_locus_tag="CMS0379" /codon_start=1 /transl_table=11 /product="putative integral membrane phophoesterase" /protein_id="YP_001709158.1" /db_xref="GI:170780826" /db_xref="GeneID:6156350" /translation="MTDEHGREHVPGADETAETAETGRPPGSAPAPDARVEIVDDELR QDRFLGDRDLTRWVTPAGRILARGVQRIVRALGPHAALVIMLLVGLVLAVGLSAVAAQ VYDNVTDSDGVAGFDKPILAFMIGIRTPWLNDAATAYTDVAGVTVMPIIAVVAMLTLA VRRRSWTPIILVTAAGTGSLLLTIAGKDLIGRARPALADAVPPYETSPSFPSGHTLNA VAIAGILTYLLLLRQHRRATRVLSITVAVVFALTIGLSRVYLGHHWFTDVLAAFFLSG AWLALVITAHRLYLTARRPGAVESSAEH" misc_feature order(416751..416819,416928..416996,417015..417083, 417141..417209,417228..417287,417315..417383) /locus_tag="CMS_0379" /old_locus_tag="CMS0379" /note="6 probable transmembrane helices predicted for CMS0379 by TMHMM2.0 at aa 80-102, 139-161, 168-190,210-232, 239-258 and 268-290" misc_feature 416967..417386 /locus_tag="CMS_0379" /old_locus_tag="CMS0379" /inference="protein motif:HMMPfam:PF01569" /note="HMMPfam hit to PF01569, Phosphoesterase,PA-phosphatase related, score 3.3e-25" gene 417755..418165 /locus_tag="CMS_0380" /old_locus_tag="CMS0380" /db_xref="GeneID:6159114" CDS 417755..418165 /locus_tag="CMS_0380" /old_locus_tag="CMS0380" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709159.1" /db_xref="GI:170780827" /db_xref="GeneID:6159114" /translation="MIGASVIAGAGAAKAETSSSPATASAAAATPSFEIFYGLNCSSA SRIYTGANHGEAWINDTFNSTQYGSAGSGQRIRNNAASIRTLNVQSVNIKGNDGTYIT FYTHGNCASLESAYGNRRNNNIGWQTVPVGGWNG" sig_peptide 417755..417832 /locus_tag="CMS_0380" /old_locus_tag="CMS0380" /note="Signal peptide predicted for CMS0380 by SignalP 2.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.488 between residues 26 and 27" gene 418256..418678 /locus_tag="CMS_0381" /old_locus_tag="CMS0381" /db_xref="GeneID:6156351" CDS 418256..418678 /locus_tag="CMS_0381" /old_locus_tag="CMS0381" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709160.1" /db_xref="GI:170780828" /db_xref="GeneID:6156351" /translation="MDLEVGPALTIPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWYA AGSMVLSDEQRARILQRLDRRMVGGAITVTVSEQRSQLRNRVAALDALREIVADALAP DAALRRPTRPTKGSQRRRLAAKTQRSATKQQRKRPTGD" misc_feature 418265..418657 /locus_tag="CMS_0381" /old_locus_tag="CMS0381" /inference="protein motif:HMMPfam:PF00472" /note="HMMPfam hit to PF00472, Class I peptide chain release factor, score 6.5e-09" gene complement(418697..418828) /locus_tag="CMS_0382" /old_locus_tag="CMS0382" /db_xref="GeneID:6156352" CDS complement(418697..418828) /locus_tag="CMS_0382" /old_locus_tag="CMS0382" /note="May be a gene remnant" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709161.1" /db_xref="GI:170780829" /db_xref="GeneID:6156352" /translation="MLLAMTTSNQLGVDFNLRSLAAIKEIGQALGWDRSEASVGASA" gene complement(419042..419971) /locus_tag="CMS_0383" /old_locus_tag="CMS0383" /db_xref="GeneID:6156353" CDS complement(419042..419971) /locus_tag="CMS_0383" /old_locus_tag="CMS0383" /note="Homolog in Aeromonas hydrophila only identified in subtractive hybridisation between virulent and avirulent strains. Lies in low GC region." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709162.1" /db_xref="GI:170780830" /db_xref="GeneID:6156353" /translation="MLCVIPSRLSQWFAPLIATYTENPHGDFLVRHLISEWRMFSSDR LSEAEAKELLADVLDDGEIVRKKFMPIAHSDGGNLRRWEELRDELMHSNRWFLEEPMD MDRLAVLLDQLITTPNAHEFSDWYRARLMTGDDAFPLTDMGAPPRNKAGHGRANPAGI PYLYLGSTRATAVAELRPHTGERACVARFDLSDADNLKLADLRDPRSLISPLSDGDET LIIQLRADLPLLERLGEELTRPVQPSGVAYEYVPTQYLCEYIKKRGFDGVIYTSSVSS DNGVNIALFHPTVATATHLDVVSVTKVTVAIES" gene complement(420078..421010) /locus_tag="CMS_0384" /old_locus_tag="CMS0384" /db_xref="GeneID:6156354" CDS complement(420078..421010) /locus_tag="CMS_0384" /old_locus_tag="CMS0384" /note="Homolog in Aeromonas hydrophila only identified in subtractive hybridisation between virulent and avirulent strains. Lies in low GC region." /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001709163.1" /db_xref="GI:170780831" /db_xref="GeneID:6156354" /translation="MYFPYFRGKQFELIAIRESAAVIADAGFNPIIEPVRETFKGLQR TLDELLLNGAKATVIVNPRHGDHRDSSEILAQYMADSHGDNDAISPALLLTSDLTVGE VLRLIEPYSERPLTLVHAGFTDGKTLANNVQPDSMTHVFLDARNTLYRRPFKGARRIL IEDGFKRMKNADYDLVDRFSDLHVTYEELGGDGYGDFLTIGDHYSEGGGPAYAVAIHL TYIDPSNDDAMFVYHFKSDSNDTPVDPAGKFAQALAKLISAVDDPLTKILSTTSVEEF RDLHSRKHFPGLGYVKKLSIKHHIETLAAYHANV" misc_feature complement(420630..420653) /locus_tag="CMS_0384" /old_locus_tag="CMS0384" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(421019..421918) /locus_tag="CMS_0385" /old_locus_tag="CMS0385" /db_xref="GeneID:6156355" CDS complement(421019..421918) /locus_tag="CMS_0385" /old_locus_tag="CMS0385" /codon_start=1 /transl_table=11 /product="putative bacteriophage protein" /protein_id="YP_001709164.1" /db_xref="GI:170780832" /db_xref="GeneID:6156355" /translation="MFRVGSPATPELAALSRLFSPAAIRELGRSGRSPLVARLLQDTS VPADLPGGATLRDALNLGYQKLTKSGNRDDYVYRSAVVEKIALGRHNLRTATVLSEVR ARASKADLVILNDTATAYEIKSERDSLGRLASQLSDYRSVFASVTVVTSPRQADAVLR LAPDDVGVLALSPRLRLQVIRETRDLPERIDPTALLDTLRSSEAAQVLSRIGVETPDV PNTHLRAELRRIYAALDPVEVHRHAVTVLKQSRTRAAQEAHIGTLPPSIRTAALFGDL NDGGRANLSAATSTSMSSVMTWS" gene complement(422030..423094) /locus_tag="CMS_0386" /old_locus_tag="CMS0386" /db_xref="GeneID:6156356" CDS complement(422030..423094) /locus_tag="CMS_0386" /old_locus_tag="CMS0386" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001709165.1" /db_xref="GI:170780833" /db_xref="GeneID:6156356" /translation="MATKIGFLSFNHWQDVRGSRVRTAQDSLLQSVDLAIAAEEIGID GAYFRVHHFAPQQASPFPLLAAIASRTRRIEIGTGVVDMRYENPLYMAEEAAMTDLIS NRRVQLGISRGSPEQVEAGYESFGYVPRDGETDADMAHRHTDLFLRALEGEELATAAP QRGIIAGGVAITPQSPGLRERIWWGAGTRATGRWAAEQGMNLMSSTLLSEDTGVPLDV LQAEQIQLFRDGWAAAGHAWEPRVSVSRSIIPIVDDESEAFFGVRSQIEGRDQVGQVG GEKWRFGRSYIGTPERLIEELGKDQAIAAADTLLVTIPNQLGVDFNLRSLAAIKEIGR RWGGIARMPRWGASASSADS" misc_feature complement(422105..423088) /locus_tag="CMS_0386" /old_locus_tag="CMS0386" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 4e-08" gene complement(423174..423329) /locus_tag="CMS_0387" /old_locus_tag="CMS0387" /db_xref="GeneID:6156357" CDS complement(423174..423329) /locus_tag="CMS_0387" /old_locus_tag="CMS0387" /note="Possible gene remnant" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709166.1" /db_xref="GI:170780834" /db_xref="GeneID:6156357" /translation="MSEHDETSYLLRNPVGAKRLIESLERARREEFVERELIEPTDTE DPHDSGE" gene 423399..423743 /locus_tag="CMS_0388" /old_locus_tag="CMS0388" /db_xref="GeneID:6156358" CDS 423399..423743 /locus_tag="CMS_0388" /old_locus_tag="CMS0388" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709167.1" /db_xref="GI:170780835" /db_xref="GeneID:6156358" /translation="MHRIFTTSFASVYVLYVKKVERKGRTRAEVDQVITWLTGFDAAE LQHHLDAETTFEDFFAAARLTPLADEVRGVICGVRIEEIDDPLMKEIRILDRLVDEVA RGRPMQKVLRGS" gene complement(423740..423895) /locus_tag="CMS_0389" /old_locus_tag="CMS0389" /db_xref="GeneID:6156359" CDS complement(423740..423895) /locus_tag="CMS_0389" /old_locus_tag="CMS0389" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709168.1" /db_xref="GI:170780836" /db_xref="GeneID:6156359" /translation="METTIHSITTPGDRGEVALDFDADGRLLGVEVLHASAVLPAAVL ADAVRIA" gene complement(423966..424541) /locus_tag="CMS_0390" /old_locus_tag="CMS0390" /db_xref="GeneID:6156360" CDS complement(423966..424541) /locus_tag="CMS_0390" /old_locus_tag="CMS0390" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709169.1" /db_xref="GI:170780837" /db_xref="GeneID:6156360" /translation="MSRWQPDTRERLAAAALELFQSRGFAETTVPEITARAGLTTRTF FRHFADKREVLFAEEDELPALVTRIIREASPDRSPLQVVEDGFPEVVASQFAEGRDTL LARKRIIGADAGLQEREMRKVQAMQEAVRQGFAERGSDPLTAVLVAHATATVFGVSIG RWLSEGGAETDLAEVLRETLDAFRRVMTAGA" misc_feature complement(424368..424508) /locus_tag="CMS_0390" /old_locus_tag="CMS0390" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 3.2e-13" misc_feature complement(424380..424472) /locus_tag="CMS_0390" /old_locus_tag="CMS0390" /note="PS01081 Bacterial regulatory proteins, tetR family signature." gene 424639..425760 /locus_tag="CMS_0391" /old_locus_tag="CMS0391" /db_xref="GeneID:6156361" CDS 424639..425760 /locus_tag="CMS_0391" /old_locus_tag="CMS0391" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_001709170.1" /db_xref="GI:170780838" /db_xref="GeneID:6156361" /translation="MSTETAAWLASSAADLTVGSAPRTAPREGEVAVRVRAVAINPLD TMKQHMGDLMYRWLPHPAVLGEDVAGVIEEVGPGVTRFAVGDRVVAYAVGMEKGRRHA PEGGFQTRAIVRNNLAAPIPDAMRFEDAAVLPLGISTAASGLFGAGQLGLRMPDATTP PTGETVVVWGGSTSVGMNAIQLAVAAGYDVVTTASPRNHELVRSLGASRAFDYRSPTA VRDITAQLAESGRKVAGVLAIGTGSGAPAVDIAIASGATRVSMASPPVSFETLPRGGR VGLPLVRLGIRMGTATPALMLRARVRGIRASFIWGSALMHDGVGAMLWGRFLPAALAE GRYVAAPAAEVVGTGLEAIQPAMDRLRAGVSARKLVVAL" misc_feature 424669..425754 /locus_tag="CMS_0391" /old_locus_tag="CMS0391" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 8.8e-37" gene 425858..426820 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /db_xref="GeneID:6156362" CDS 425858..426820 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /note="N/R/C?" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709171.1" /db_xref="GI:170780839" /db_xref="GeneID:6156362" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 425930..425995 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 425995..426116 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 426116..426181 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 426266..426808 /locus_tag="CMS_0392" /old_locus_tag="CMS0392" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.7e-38" gene complement(426839..427600) /locus_tag="CMS_0393" /old_locus_tag="CMS0393" /db_xref="GeneID:6156363" CDS complement(426839..427600) /locus_tag="CMS_0393" /old_locus_tag="CMS0393" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709172.1" /db_xref="GI:170780840" /db_xref="GeneID:6156363" /translation="MPSHPPRPSALALAPLSRALGHLRASRRLRNLRRTLPVAAAAAT LVVIATFAVAPPSAHAAEASIAHSISQDTVEQDILSGRISIDQLVDAAVAARSGAPDA PPMSRSEITRQMSEEVQALRTQPTTATPGSDVQDDDPGAAAGPGTGTGTGVGVAKFSF KKLFGKIKGFFRHGVTLDIPLWKVMLGNGALVTAAAVTSVACASFLVLSCALVAGALI GASGYVFWLLHQCVRNQDRTWHLTLPDVHRSWCSK" sig_peptide complement(426839..427018) /locus_tag="CMS_0393" /old_locus_tag="CMS0393" /note="Signal peptide predicted for CMS0393 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.982 between residues 60 and 61" misc_feature complement(order(426920..426988,427427..427495)) /locus_tag="CMS_0393" /old_locus_tag="CMS0393" /note="2 probable transmembrane helices predicted for CMS0393 by TMHMM2.0 at aa 36-58 and 205-227" gene 427900..428145 /locus_tag="CMS_0394" /old_locus_tag="CMS0394" /pseudo /db_xref="GeneID:6156364" gene complement(428188..429036) /locus_tag="CMS_0395" /old_locus_tag="CMS0395" /db_xref="GeneID:6156365" CDS complement(428188..429036) /locus_tag="CMS_0395" /old_locus_tag="CMS0395" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709173.1" /db_xref="GI:170780841" /db_xref="GeneID:6156365" /translation="MWESRGGLYGPDMSDGEGSGSYVYLYRTIGAAGKPKYVGYGTTP ARALTHSSGSHNTALEDWIGQGDYALEIAGPFANESTGHEVEAALISALKPEFNVASG DGHAFVPLGVPPELAERISIAPVDEAALARQAGGALIVYLAAGKVMRDGRAMADPSNP DETVIAADAEAWWQINRHMAGWRERPEETPRTLVAVHGPRPRSRFVIGAFTIDVDRLL LGAEDLRDGSLWKIPLINRTDADAAGLRGRKLTESTFGQGRHRVYHWVGADGVTHWDG RTHPTS" gene 429146..429751 /locus_tag="CMS_0396" /old_locus_tag="CMS0396" /db_xref="GeneID:6156366" CDS 429146..429751 /locus_tag="CMS_0396" /old_locus_tag="CMS0396" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709174.1" /db_xref="GI:170780842" /db_xref="GeneID:6156366" /translation="MTLTESASPASTERTADTAVPIVRELDTRWSPRSFDATATVSDQ QLDALLEAARWAPSGSNQQPRRFIVARRGTHAFDIIVDSLVGFNAAWAVNASALVVAI AETSTVEGEKRPYVAYDLGQAVAHLSVQAQAEGLHTHQMAGVEFDKLSAAFDLPENLQ PLTVTAVGVVAPADALEGPLAERETAPRSRLPLSELVLVRE" misc_feature 429221..429652 /locus_tag="CMS_0396" /old_locus_tag="CMS0396" /inference="protein motif:HMMPfam:PF00881" /note="HMMPfam hit to PF00881, Nitroreductase, score 3.6e-06" gene complement(429865..430272) /locus_tag="CMS_0397" /old_locus_tag="CMS0397" /db_xref="GeneID:6156367" CDS complement(429865..430272) /locus_tag="CMS_0397" /old_locus_tag="CMS0397" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709175.1" /db_xref="GI:170780843" /db_xref="GeneID:6156367" /translation="MSARMAGPLLRRRLRATHAAAVTGLVVVLVVVVVVLLPVLGFIG AADAATVGQLDVPVTLIALGVGVSLVVAVVMLVVSARTRDGRVAWVAAVSAVVATLVG SAWPLVATVIASVDQVQDAIPFVQDLVGRVLGG" sig_peptide complement(429865..430008) /locus_tag="CMS_0397" /old_locus_tag="CMS0397" /note="Signal peptide predicted for CMS0397 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.841 between residues 48 and 49" misc_feature complement(order(429946..430014,430033..430101, 430144..430212)) /locus_tag="CMS_0397" /old_locus_tag="CMS0397" /note="3 probable transmembrane helices predicted for CMS0397 by TMHMM2.0 at aa 21-43, 58-80 and 87-109" gene 430504..431952 /locus_tag="CMS_0398" /old_locus_tag="CMS0398" /db_xref="GeneID:6156368" CDS 430504..431952 /locus_tag="CMS_0398" /old_locus_tag="CMS0398" /codon_start=1 /transl_table=11 /product="putative beta-lactamase" /protein_id="YP_001709176.1" /db_xref="GI:170780844" /db_xref="GeneID:6156368" /translation="MGASPVRVESGTPAVPDPRRAPMTEILDYVRTWLDHRVWQTRVP GAQVAIARHGDLVLSEAFGVADPTTGAPLTPAHLFRVASHSKSFAATAILQLAEQGAL RLDDRLGVHVPELAEAGSELADVTIAALLEHGAGVLRDGFDGDHWQHSGPFPDRRHLL AIATTPGVAKVAPDTAFNYSNIGYSLLGLVIESASGLSFADYIDERIIAPLGLRDTTA EYVPARADEYAAASTSLRTSRERTVLPHVDTRAMAAATGVTSTASELVTFFSALVLPD DERLISAASKRAQQRPRYVTGADPAGTRRYGYGLIIERVGSGEHEATVLGHSGGYPGH ITRTAVDPVSGWAVSVLTNAIDGPAAALSTGILELLLADSAATDAERAAVEAPFTGRF ANVWGMQDFQVVGDRFLRIDPQAEHPLESVDVLEATDDSSARIVEGDGFGSVGEEVTV DRAADGSVDRIRAGGGMTLEPETRAWVPRSRG" misc_feature 430591..431622 /locus_tag="CMS_0398" /old_locus_tag="CMS0398" /inference="protein motif:HMMPfam:PF00144" /note="HMMPfam hit to PF00144, Beta-lactamase, score 2.4e-61" gene 431970..433313 /locus_tag="CMS_0399" /old_locus_tag="CMS0399" /db_xref="GeneID:6156369" CDS 431970..433313 /locus_tag="CMS_0399" /old_locus_tag="CMS0399" /codon_start=1 /transl_table=11 /product="putative phosphatase" /protein_id="YP_001709177.1" /db_xref="GI:170780845" /db_xref="GeneID:6156369" /translation="MAGRAPPGHLRSTSRKDPRHARSIQCRRPHGRPLPTRGTIITTP FRRPRARTATLLSTTAILGLLLTGTGVTAATAADAPTTPATSAATAPAVAPFDQATLD APYPSNSTYDFVPMLDQFTSLKANRPDIMKLNDKKTITINQAATKAQSARAIIDQYAD MSITMSDGLGKDLGEIYRTAREAGQLPKTDALLAKNGGLVGKYSSTNPVKTYFANPRP YVAFPLKLKYRDKPGGNAWAGQDGSYPSGHTSQAFWQGTALATMLPELAPQILARASD AGNNRIIMGAHYPLDVMAGRMMGQKIVERRWSDPEFRTLFEQASTELRTVLEAKCGAA LAVCIAKDKPYLSTKQALKVYEQRMSYDFPRVGDKGQPITVPTGAESLLITSHPDLTP EQRRQVLALTAIDSGEPLDEGTEGSWQRIDLPAAMAAKVVVTADGTVSLVKTGKR" misc_feature 432543..432908 /locus_tag="CMS_0399" /old_locus_tag="CMS0399" /inference="protein motif:HMMPfam:PF01569" /note="HMMPfam hit to PF01569, Phosphoesterase,PA-phosphatase related, score 0.0033" misc_feature 432693..432716 /locus_tag="CMS_0399" /old_locus_tag="CMS0399" /note="PS01157 Class A bacterial acid phosphatases signature." gene complement(433392..435272) /locus_tag="CMS_0400" /old_locus_tag="CMS0400" /db_xref="GeneID:6156370" CDS complement(433392..435272) /locus_tag="CMS_0400" /old_locus_tag="CMS0400" /note="Possibly sortase sorted" /codon_start=1 /transl_table=11 /product="putative secreted amidase" /protein_id="YP_001709178.1" /db_xref="GI:170780846" /db_xref="GeneID:6156370" /translation="MPARRRARARILPAGRALAAAALAVGLAAGGGIHAAPARASADD ASSAPAATDQAAPAVVDLGVADAVALLESGSTTSVALTRAYLARIDAYDDDGADGKGL QAVITANPDALATATTLDPERAAGTIRGPLHGVPVVVKDNHATADMPTTVGSAALRDY RTAADSTAVARLRAAGAIILAKTNTSEFAWHGTSTLSSARGRTANPYDRSWSASGSSG GTAAAVAAAYAPAGLGTDSCGSILGPAAHQSLVGFRPTMGLTSTAGIVPLSPRQDVSG PMTTTVADAALLTEVLAGRDPADPLTAIVDEQATDAYVAGLRPDALAGKRIGVVRWPS EEDPERPGLAETTALFEQAVRDLEAQGAEVVEVPLTREFVEQTLQSGGWRDMRPAIDR FLRETPATWSARVAARTEPPDVLSFADVMADRPSALTDGDIAYFLGHEDIPNPEYERS IAEQDAGKAAADAFFVEQGVDALAMPTSATSATPAWAGTTFCDIGANTGIPTISVPAG FTSTGAPVGLELAAPRSRDGDLLAMAYAYEQATRHRVAPGSTPELGSAPDTADAAAAT TDEGAAAPADPSPQALGAVRTAGIGINTLAENLAIAAGLAAAGGLVAATGLLYRRRRV AA" sig_peptide complement(433392..433517) /locus_tag="CMS_0400" /old_locus_tag="CMS0400" /note="Signal peptide predicted for CMS0400 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.689 between residues 42 and 43" misc_feature complement(order(433416..433475,435171..435239)) /locus_tag="CMS_0400" /old_locus_tag="CMS0400" /note="2 probable transmembrane helices predicted for CMS0400 by TMHMM2.0 at aa 12-34 and 600-619" misc_feature complement(433680..435035) /locus_tag="CMS_0400" /old_locus_tag="CMS0400" /inference="protein motif:HMMPfam:PF01425" /note="HMMPfam hit to PF01425, Amidase, score 3.9e-87" gene complement(435397..435579) /locus_tag="CMS_0401" /old_locus_tag="CMS0401" /db_xref="GeneID:6156371" CDS complement(435397..435579) /locus_tag="CMS_0401" /old_locus_tag="CMS0401" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709179.1" /db_xref="GI:170780847" /db_xref="GeneID:6156371" /translation="MATLTRPRRGKIIAGVCAALADRFGVSRFLVRLLFVLSIVLPGP QVLLYLILWIVFPKQR" misc_feature complement(435400..435579) /locus_tag="CMS_0401" /old_locus_tag="CMS0401" /inference="protein motif:HMMPfam:PF04024" /note="HMMPfam hit to PF04024, PspC, score 1.2e-20" misc_feature complement(435472..435537) /locus_tag="CMS_0401" /old_locus_tag="CMS0401" /note="Predicted helix-turn-helix motif with score 1034.000, SD 2.71 at aa 15-36, sequence GVCAALADRFGVSRFLVRLLFV" gene 435707..436426 /locus_tag="CMS_0402" /old_locus_tag="CMS0402" /db_xref="GeneID:6156372" CDS 435707..436426 /locus_tag="CMS_0402" /old_locus_tag="CMS0402" /codon_start=1 /transl_table=11 /product="putative RNA-binding protein" /protein_id="YP_001709180.1" /db_xref="GI:170780848" /db_xref="GeneID:6156372" /translation="MRANPWCDTRMVEPGLGVSPRRRGSGPPAVRESPTSPNAREDRM EQHRSALPVRVVAAFHAAPSRAAGVELLLSALLEASSATGAAVILPRASEIVVAGESG AELRAVLEADPVPVGSRLLVVAMADGAGKRPDARRDAGGAVALHRATGSLDAADRVVA EEVAVHARIALAAWDAADDLAVGLASRSVIGQAQGILMERFSLDADRAFQVLRRYSQD GNVKLVEVARGIVETGALPGG" misc_feature 436232..436399 /locus_tag="CMS_0402" /old_locus_tag="CMS0402" /inference="protein motif:HMMPfam:PF03861" /note="HMMPfam hit to PF03861, ANTAR, score 7e-17" gene complement(436514..437527) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /db_xref="GeneID:6156373" CDS complement(436514..437527) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /codon_start=1 /transl_table=11 /product="putative sigma factor" /protein_id="YP_001709181.1" /db_xref="GI:170780849" /db_xref="GeneID:6156373" /translation="MTGTLRPRALAAAPPASRGSASRAPASAIPLATPRPRTPPLAPE ATPEPAPDLTAARDEKRRVTHDRFVRAAAAAEDPAGEAERRRLHDQIVLDHLELADQL ARQHSGRAHDWSDLRQVGYLGLVKAARRYDPGFGAPFVSFAIPTISGEIKRHLRDNGW MVRPPRQIQELRHALLAVVPALTQRLGRTPTDAELAAHTGHPREEVMEALAAHSSLRP ASLDHTVHEHEGISLADTLGADDPGYARAERTVLLDAARGVLSERDRRILHLRFVDEC SQSEIAAELGVTQMQVSRLLARILGALRAELTRGEAEALPEVAPLAAVSPIRPSGVDR RTA" misc_feature complement(436613..436762) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 1.2e-13" misc_feature complement(436637..436702) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /note="Predicted helix-turn-helix motif with score 2258.000, SD 6.88 at aa 276-297, sequence CSQSEIAAELGVTQMQVSRLLA" misc_feature complement(436739..436786) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." misc_feature complement(436793..437035) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /inference="protein motif:HMMPfam:PF04539" /note="HMMPfam hit to PF04539, Sigma-70 region 3, score 7.2e-07" misc_feature complement(437045..437257) /locus_tag="CMS_0403" /old_locus_tag="CMS0403" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 5.9e-14" gene 437782..439314 /locus_tag="CMS_0404" /old_locus_tag="CMS0404" /db_xref="GeneID:6156374" CDS 437782..439314 /locus_tag="CMS_0404" /old_locus_tag="CMS0404" /codon_start=1 /transl_table=11 /product="putative cationic amino acid transporter" /protein_id="YP_001709182.1" /db_xref="GI:170780850" /db_xref="GeneID:6156374" /translation="MSLFRTKSIESSLADAAGGERSLTRSLGTWDLMLMGVAVAVGAG IFSVGAKAAGNYAGPSVTLAFVLAAVTCGLAIMCYAEFASAVPVAGSAYTFTYATMGE LLAWIIGWDLILEMLTAAAVIAKYWGIYLESALKLAGLDIPSTITVFGLGISWGAVLI TAIFTVLLVLGTKLSSRVSSVFTVLKVAVVLFVIVVGAFYVKAENYSPFIPPQRPTEG GSADVWTQSLFSWASGQEPTQYGLYGLLAGASLVFFAFIGFDVVATSAEEVKDPQRTL PRGIFAGLAVVTVLYVLVTLVLTGMVPYTVLADAKEPSLTTAFTAVGAGWAAQVISIG TLLGLTTVLMVLLLGLARVVFAMSRDGLLPRGLSRTSAKRRTPVRVQIIAGVVVAALA GFTDVGVLEEMINIGTLSAFVLVSIGVIVLRKKRPDIRAAFRVPLMPWLPILSAVLCV WLMLNLTTLTWVRFLVWLALGFAVYFLYGRRHSLVGQEEARIAAGGEPAPELPSAATP RD" misc_feature order(437860..437928,437971..438039,438100..438168, 438226..438294,438313..438381,438490..438558, 438619..438687,438745..438849,438910..438978, 438988..439047,439084..439143,439156..439215) /locus_tag="CMS_0404" /old_locus_tag="CMS0404" /note="12 probable transmembrane helices predicted for CMS0404 by TMHMM2.0 at aa 27-49, 64-86, 107-129, 149-171,178-200, 237-259, 280-302, 322-356, 377-399, 403-422,435-454 and 459-478" misc_feature 437872..439242 /locus_tag="CMS_0404" /old_locus_tag="CMS0404" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 3.2e-24" gene complement(439409..440212) /locus_tag="CMS_0405" /old_locus_tag="CMS0405" /db_xref="GeneID:6156375" CDS complement(439409..440212) /locus_tag="CMS_0405" /old_locus_tag="CMS0405" /codon_start=1 /transl_table=11 /product="DNA glycosylase" /protein_id="YP_001709183.1" /db_xref="GI:170780851" /db_xref="GeneID:6156375" /translation="MPEGDTVWRTATHLHEAIGGQVLTRSDFRVPKYATLDLAGQEVD EVVSVGKHILHRVGDLTIHSHLKMEGSWHIYQHGTAWRRPAFEARVVLETAERVTVGF SLGVLEVIPRDQEHTVVGHLGPDILGPDWGDEAAEEIVRRIAAQPDRAIGLALLDQRN AAGIGNVYRAELCFLRGVLPTRPVREVPDLPAMIALARRTMRANRDRIERTTTGDLRR GRTDWVYGRKGKACLRCGTRILQGQLGDPVRPGMGAQDRVTYWCPRCQT" misc_feature complement(439565..439849) /locus_tag="CMS_0405" /old_locus_tag="CMS0405" /inference="protein motif:HMMPfam:PF06831" /note="HMMPfam hit to PF06831, Formamidopyrimidine-DNA glycolase, score 1.7e-18" misc_feature complement(439850..440212) /locus_tag="CMS_0405" /old_locus_tag="CMS0405" /inference="protein motif:HMMPfam:PF01149" /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA glycolase, score 5.8e-18" gene complement(440240..445843) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /db_xref="GeneID:6156376" CDS complement(440240..445843) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase" /protein_id="YP_001709184.1" /db_xref="GI:170780852" /db_xref="GeneID:6156376" /translation="MGRPAAPHAHPHPHRRGHRDRSAAGSRRRPLVGPHRRARRSSAA GAAARIRIARGRPVRAVAVPAARAGRRVAARAHRAAGRPRVVPDRARIDRRPGSRRRR RRRAGRARLARRAARDPALGGAPRVQPGRRHRAPAAAARARALRVRGAAQRVLGARRA RRRRGARGRTDPGVLGPRHGRPGDPGGGRRAHGRVDRRPHRPHGAHLRGPAALGLRGR AAGCVGVHPGARGLIRGAARPAVLRRAPCERPTRRVVGGPEEDEQMDPVLARFSPATR EWFQGAFPGPTAAQTGAWEAVQKGSHALVVAPTGSGKTLAAFLWSIDRLASRPAPEDP MRRTRVLYISPLKALAVDVERNLRSPLVGIVQTAKRLGAEPPEVTVGVRSGDTPAADR RSLAKTPPDILITTPESLFLMLTSAARETLAGVETVIVDEVHAVAATKRGSHLALSLE RLDALLEKPAQRIGLSATVRPPEEVARFLGGRSPVSIVSPKNTKEFNLRVIVPVDDMT ELGTTAPLEGSAAQGDQPQQGSIWPHVEEGIVDLVLQHTSSIVFTNSRRLAERLTARL NEIYAVRIEEGRIDAEGRVVAASDAVPVLAGAAAGSGAGPGSARSTDFSATRRTAPRP PAELMAQAGSMEGADPVLAKAHHGFVSKEQRARIEDDLKSGRLRCVVATSSLELGIDM GDVDLVVQVEAPPSVASGLQRVGRAGHQVGEVSRGVIFPKHRADLIHSAVAAERMASG QIESLRVPANPLDVLAQQTVAAVALEPLGVEEWFDIVRGSAPFATLPRSAYEATLDLL SGRYPSDEFAELRPRIVWDRDEGTIEGRPGAQRLAVTSGGTIPDRGLFGVFMVGEKAS RVGELDEEMVYESRVGDVFALGATSWRIQEITHDRVLVTPAFGEPGKLPFWKGDGLGR PLELGRAIGAFVRELSGSAVDDARARAGRVGLDDRAVNNLLAFLDDQKKATGHVPNDR TLVVERFRDELGDWRVVLHSPYGMQVHAPWALAVGARVTELYGIDGATMANDDGIVVR IPETDGEPPGADLFVFEPDELDAIVTREVGGSALFASRFRECAARALLLPRYNPGRRS PLWQQRQRASQLLDVARKFPAFPIVLETVREVLQDVYDLPALTSLAKDIEARRIKIVE TTTEDASPFARSLLFSYVGAFMYEGDSPLAERRAAALSLDAGLLSELLGRAELRELLD PAVIARTELELQRTAPDRRAKGLEGVADLLRILGPLDAEEVAVRLEPEEAGSAADHLD ALVAGKRALRVSFGGQPRVAAIEDASRLRDALGVPLPIGTPLAFVEPVADPLGDLVGR YARTHGPFTIADAATGIGLGSAVIADTLARLGAQRRVVEGEFRPGASGSEWCDVEVLR RLRSRSLAALRSEVEPVEQAAFARFLPAWQHVAGADRERGLRGVDGVLQVIEQLAGAP VPASAWETLVLPARVRDYTPAMLDELTSTGEVIWSGAGTLAGADGWVSLHLADQVALT LPEPDAHDTDELQREILTTLGTGGGYFFRQLSDAVGSTDDKALVTALWDLVWAGLVTN DTLSPLRALLAGGSTAHKTPQRAPRGRMYRGGRMPRPDMPTRTGPPTAAGRWSIVPLA ETDATVRAAGTAELLLERYGVVTRGSVMTERVPGGFALTYKVLAGFEDTGRARRGYFI ETLGAAQFSTGGTVDRLRGFTRDPDAGGRPLNALTLAATDPANAYGAALPWPRLDGSS PDADGGTGAGVGMEATDTEATGDTGADGASTAIAESGSVDARGERPTGHRAGRKAGAL VVLVDGALVLYVERGSKTVLRFDDDEAVIRAAAESLGQIVRRGGVAKLAIEKVNGAFI LGTPLGTALQEHGFSATPRGLRMRS" misc_feature complement(440780..440809) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." misc_feature complement(443711..443941) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 6.3e-15" misc_feature complement(444419..444988) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 1.3e-38" misc_feature complement(444479..444508) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." misc_feature complement(444902..444925) /locus_tag="CMS_0406" /old_locus_tag="CMS0406" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 445954..446508 /locus_tag="CMS_0407" /old_locus_tag="CMS0407" /db_xref="GeneID:6156377" CDS 445954..446508 /locus_tag="CMS_0407" /old_locus_tag="CMS0407" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709185.1" /db_xref="GI:170780853" /db_xref="GeneID:6156377" /translation="MTVRTPDPNIPDPNSGWLSDVELAQIRQRLPLLYVEAVPVRVDG MGRVKDIGVLLRATVTGQMTRMLVSGRVMYGETLRDALFRHLEKDLGPMAFPQLPASP TPFSVAEYFPFPGASPYTDDRQHAVSLAYVVPVTGTCDPRQDALEITWMTPEEAASDA VSADMEGGRGALLRAALASVGVLP" gene complement(446555..447178) /locus_tag="CMS_0408" /old_locus_tag="CMS0408" /db_xref="GeneID:6156378" CDS complement(446555..447178) /locus_tag="CMS_0408" /old_locus_tag="CMS0408" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709186.1" /db_xref="GI:170780854" /db_xref="GeneID:6156378" /translation="MTRVALATRGPYRKGVERRELLIRTAIEVFAEQGYRSSSLREIA SRAEITPAGLLHHFSGKEELLLAVLERREERLAAAIELHRPRSVAEHAAVVIADGEQS ACLTRIIAVVSSEASAAGHPLHELFRERRARELERITAGVVVDQARGLIDPHLDPEAA AAVVLSAMDGLHVQRGYGVGAGASQAFEDLRRHYLEPPQFAERASAV" misc_feature complement(446975..447115) /locus_tag="CMS_0408" /old_locus_tag="CMS0408" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 3.5e-18" gene complement(447357..448898) /locus_tag="CMS_0410" /old_locus_tag="CMS0410" /db_xref="GeneID:6156379" CDS complement(447357..448898) /locus_tag="CMS_0410" /old_locus_tag="CMS0410" /codon_start=1 /transl_table=11 /product="putative DEAD-box RNA helicase" /protein_id="YP_001709187.1" /db_xref="GI:170780855" /db_xref="GeneID:6156379" /translation="MTTDTFGALGVPAPLVSALTANGITTPFPIQVDTLPDTLNGRDV LGRGKTGSGKTLAFAIPMIARLGGGLAGGRRRPGRPLGLILAPTRELATQITAAMAPL AEAYNLTTTTIFGGVSQQRQVAALKAGVDVVVACPGRLEDLMKQGFVNLDAVEITVLD EADHMADLGFLPVVTRILDKTPNTGQRMLFSATLDNGVDKLVRRYLHDQVLHSVDEAN SPVAAMTHHVFEASDVEAKRLLVQKLAGGSGRRILFMRTKHHAKKLAKQLTDAGIPSV DLHGNLSQVARDRNLAAFSAGDVKVLVATDVAARGVHVDDIELVIHVDPPAEHKAYLH RSGRTARAGSAGDVVTIMLPAQRKDVQLLMRKADIHVTPQQVTESSPAVAELTGAVAA YVKPAPRETKSVRETTQRQSQGGRANGGGRSQGANAQRKRAARDGAPVGGGRRDGASS GRRDGASGGQRGGAPRNFSTSSEGFGGGSSVGTARPRQERPAASGGASAGGRERTHRR VSSGR" misc_feature complement(447870..448100) /locus_tag="CMS_0410" /old_locus_tag="CMS0410" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 1.6e-27" misc_feature complement(448296..448820) /locus_tag="CMS_0410" /old_locus_tag="CMS0410" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 3.9e-52" misc_feature complement(448734..448757) /locus_tag="CMS_0410" /old_locus_tag="CMS0410" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(449137..449784) /locus_tag="CMS_0411" /old_locus_tag="CMS0411" /db_xref="GeneID:6156380" CDS complement(449137..449784) /locus_tag="CMS_0411" /old_locus_tag="CMS0411" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709188.1" /db_xref="GI:170780856" /db_xref="GeneID:6156380" /translation="MPSAVTALHVADWRRRTHEMYAEVRWVAQTDPAAAHALWRRSRD DMFRSHPATPLVPEHRADFDRLDVTEYDPAWRFELEIHDDRGDERHEVETGTDGVVPF ELLGSVHIPSADGREAGSLDVWRLASYGGGLHLPVKDASHRREGGTYGGGRYLLDTVK GSDLGAGAPGSIVVDLNFAYNPSCAYDPEWACPLAPAGNVLDFEVPVGEMGFLPG" gene complement(449838..450413) /locus_tag="CMS_0412" /old_locus_tag="CMS0412" /db_xref="GeneID:6156381" CDS complement(449838..450413) /locus_tag="CMS_0412" /old_locus_tag="CMS0412" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709189.1" /db_xref="GI:170780857" /db_xref="GeneID:6156381" /translation="MRVLLKTILDCDPDAAWRALHSPTVMREVAGPLVDFVPLEDGGF PSSWDGREHVAAMQTGPFTAGRQSIRLRDMKPRVEGVRIVRDDGHGLSGLMSIPTSMR HSMAVSPDPAGPDADGRVKTLFRDQLEFEAGLLGPAMWPTFWAFWQWRAFRLRQLAPT WAYDWEPAAAPDADDAPADDASAADAGSSAR" gene 450462..450983 /locus_tag="CMS_0413" /old_locus_tag="CMS0413" /db_xref="GeneID:6156382" CDS 450462..450983 /locus_tag="CMS_0413" /old_locus_tag="CMS0413" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709190.1" /db_xref="GI:170780858" /db_xref="GeneID:6156382" /translation="MGQDGTDMIRYWVGVVSRDRVLDGLDLGIAQVNRGAREPVERLG EADGFVYYSPRESYPDGQLLRAFTAIGRVADAAPYQGRVGEWRPWRRRMEWDLGAVDA PIRPLVPVLDFTRDSLEWGRKLAPGLLEITRDDFEVIRQAMRRGAPEPSRRVIRGGSG PWTPVASDRDLLR" gene 450967..451557 /locus_tag="CMS_0414" /old_locus_tag="CMS0414" /db_xref="GeneID:6156383" CDS 450967..451557 /locus_tag="CMS_0414" /old_locus_tag="CMS0414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709191.1" /db_xref="GI:170780859" /db_xref="GeneID:6156383" /translation="MTSSADAAHPDPSTQARYQVRLDGGVAGARRIVTGADVIVWVDA LPSVPPPTVARRDEVLAMMPARPAVVSAGLADAPAVADWILALQTALGRRAYVAVVAA GTVEADGSWRACAEDQLAAGAVVDALAALGIDATSPEAAVACAAYQQLRPALGHLVTA SVSARRLAAAGHDGLVAEALAAGPVDVVVHRLHRDA" gene 451671..451973 /locus_tag="CMS_0415" /old_locus_tag="CMS0415" /db_xref="GeneID:6156384" CDS 451671..451973 /locus_tag="CMS_0415" /old_locus_tag="CMS0415" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709192.1" /db_xref="GI:170780860" /db_xref="GeneID:6156384" /translation="MKAVINGVTVAEAPKDELIEIEGNWYFPPASVDMSLLAETATPY HCPWKGDTQYYSVKDGDTVLQDRAWSYPTPIPSSFDRVGRDYSGYVAFWKEVRVGE" misc_feature 451671..451970 /locus_tag="CMS_0415" /old_locus_tag="CMS0415" /inference="protein motif:HMMPfam:PF04248" /note="HMMPfam hit to PF04248, Protein of unknown function DUF427, score 1.6e-21" gene complement(451987..452691) /locus_tag="CMS_0416" /old_locus_tag="CMS0416" /db_xref="GeneID:6156385" CDS complement(451987..452691) /locus_tag="CMS_0416" /old_locus_tag="CMS0416" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709193.1" /db_xref="GI:170780861" /db_xref="GeneID:6156385" /translation="MSRAPGSERPTGQWITDPDGLRWFLDTGAVSLDLAYTGALGDPE PRETLPDAAALGAWLSEHLAPVSEPGERDLADARTLRQAIGDIAAAIADGAEPAPRDV DVLNLYAATPDLPPALGGGSRQAGRALARPAQALATAARDAVTVFGAGSERIHRCSAD DCTVLYLDTTRSGTRRWCSMRRCGNRAKVRAHRARQLRERRTGIPARVAPVRPATPAT PAPVHDDGPGAGAPGP" misc_feature complement(452104..452616) /locus_tag="CMS_0416" /old_locus_tag="CMS0416" /inference="protein motif:HMMPfam:PF07336" /note="HMMPfam hit to PF07336, Protein of unknown function DUF1470, score 1.1e-30" gene complement(452688..453173) /locus_tag="CMS_0417" /old_locus_tag="CMS0417" /db_xref="GeneID:6156386" CDS complement(452688..453173) /locus_tag="CMS_0417" /old_locus_tag="CMS0417" /codon_start=1 /transl_table=11 /product="putative bacteriophage protein" /protein_id="YP_001709194.1" /db_xref="GI:170780862" /db_xref="GeneID:6156386" /translation="MRVWAEALIALHLDPSWTFAFDHARTRAGACHYGEKRITVSRHL AGRFEDDEIHQVLLHEVAHALAGSRAGHGPEWKRVAAELGYEGSRLHSGTVAEELAPW VGACPAGHAHFRYRKPTRPLACGLCSKRFDRAHLIAWTKRDVPSGAAASGRADHREGA A" misc_feature complement(452979..453008) /locus_tag="CMS_0417" /old_locus_tag="CMS0417" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene complement(453228..453758) /locus_tag="CMS_0418" /old_locus_tag="CMS0418" /db_xref="GeneID:6156387" CDS complement(453228..453758) /locus_tag="CMS_0418" /old_locus_tag="CMS0418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709195.1" /db_xref="GI:170780863" /db_xref="GeneID:6156387" /translation="MTGTAIIIGYDRDTLREKVDLRAAGDRLDELEALRSLSAITEKV ALLRMLGRLDEAWDMANAAVRQARFTGDRETLLACRIRRAQVQQYQGKLDIALQDLGG CVDEARAHEWYALEAFALQHRGKVHFDRGDYRLALSDFEDAYTLRTREGLPSDQLESS ALAIDVAKERIAAQPA" misc_feature complement(453309..453410) /locus_tag="CMS_0418" /old_locus_tag="CMS0418" /inference="protein motif:HMMPfam:PF07719" /note="HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.0096" gene complement(453769..454953) /locus_tag="CMS_0419" /old_locus_tag="CMS0419" /db_xref="GeneID:6156388" CDS complement(453769..454953) /locus_tag="CMS_0419" /old_locus_tag="CMS0419" /codon_start=1 /transl_table=11 /product="putative secreted oxidoreductase" /protein_id="YP_001709196.1" /db_xref="GI:170780864" /db_xref="GeneID:6156388" /translation="MNRRSRTRPARVAALGFAALVALTGCTNDDGSPVDVRATEPPAP SPTSTDAAPAGVAPSGTPTALASDLVSPWSVAELPSGSLLVSERDTSRIVEVLGDGTT RVAGTIAGVGPQGEGGLLGIATREVDGGTQLYAYYTSSTDNRIVRMDVTGEPGSLGLG AAEDVVTGIPRDTTHNGGRIAFGPDGMLYATTGDANLRDAAQDPISLAGKILRLTPDG QGPSDNPTPGSPVYSMGHRNPQGIAWDAEGNLWAAEFGQDTWDELNLIEPGGNYGWPV VEGATDDPADSAYIDPVRQWATDDASPSGIAISGDTIFMAGLGGQRLWVIRPGAVVTD PIPDDRVTEFYTREFGRIRDVQAAPDGSLRMLTGNTDGRGTPRAGDDKLLRVELMPIQ AG" sig_peptide complement(453769..453921) /locus_tag="CMS_0419" /old_locus_tag="CMS0419" /note="Signal peptide predicted for CMS0419 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.337 between residues 51 and 52" misc_feature complement(454876..454908) /locus_tag="CMS_0419" /old_locus_tag="CMS0419" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(455000..455788) /locus_tag="CMS_0420" /old_locus_tag="CMS0420" /db_xref="GeneID:6156389" CDS complement(455000..455788) /locus_tag="CMS_0420" /old_locus_tag="CMS0420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709197.1" /db_xref="GI:170780865" /db_xref="GeneID:6156389" /translation="MPGAYQLVVDGTPQSHVNMDDPGELFFEYVQRMGHVIDLVGDPG QPITALHLGAGALTIPRYVEATRPGSRQQVIELEQDLVELVREHLPWSRKASIRVRYG DAREVMGRLPQGLRGTVDLVVVDVFSGARTPAHITSRDFYAEAAAFLAPGGIMTVNVA DGHGLRFARGQAATIQDVLPHVAALTETQVLKGRRFGNVVFAASATPLPLDFVPRLLA GGPHPAKVVEGRELADFIAGASVVTDATAVPSPAPARSIFQTKP" gene complement(455867..456829) /locus_tag="CMS_0421" /old_locus_tag="CMS0421" /db_xref="GeneID:6156390" CDS complement(455867..456829) /locus_tag="CMS_0421" /old_locus_tag="CMS0421" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709198.1" /db_xref="GI:170780866" /db_xref="GeneID:6156390" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature complement(455891..456433) /locus_tag="CMS_0421" /old_locus_tag="CMS0421" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2e-41" misc_feature complement(456692..456757) /locus_tag="CMS_0421" /old_locus_tag="CMS0421" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene 456940..457989 /locus_tag="CMS_0422" /old_locus_tag="CMS0422" /db_xref="GeneID:6156391" CDS 456940..457989 /locus_tag="CMS_0422" /old_locus_tag="CMS0422" /codon_start=1 /transl_table=11 /product="putative lipoate-protein ligase" /protein_id="YP_001709199.1" /db_xref="GI:170780867" /db_xref="GeneID:6156391" /translation="MHGEYKVPGGKLVVVDLDVTDGRISGFRLAGDFFLEPDDALEAI DRAVNGLPEDSDANAIAAAIRRALPAQAVLLGFSPEAVAVAIRRSLARATNWGDYEWE VIHDRAYRPVEQMALDQVLAEEVGAGRRNPTLRIWEWEQPAVVIGSFQSLRNEVDAEQ AAAHGFDVVRRVSGGGAMYMEAGAVITYSIYAPVDLVQGMTFADSYAYLDEWVITALR SLGIDASYQPLNDITSPSGKIGGAAQKRLGAGAVLHHVTMSYDMDGEKMVQVLRIGRE KISDKGITSAAKRVDPLRSQTGMSRADIIDRMKATFTGLYGGKPGRVTPEEWAKTRQL VEDKFSTPEWLTRVP" misc_feature 457375..457737 /locus_tag="CMS_0422" /old_locus_tag="CMS0422" /inference="protein motif:HMMPfam:PF03099" /note="HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase, score 2.3e-25" gene complement(458248..458532) /locus_tag="CMS_0423" /old_locus_tag="CMS0423" /db_xref="GeneID:6156392" CDS complement(458248..458532) /locus_tag="CMS_0423" /old_locus_tag="CMS0423" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709200.1" /db_xref="GI:170780868" /db_xref="GeneID:6156392" /translation="MSVDVTHDPDGSRYTLWLDGERAGFADYLIQGDRIVFTHTEVDP AKRRGGLGGELVRAALDDVRGGARTVVAACPFVAEWIDEHPDYRELLERG" gene 458556..459533 /locus_tag="CMS_0424" /old_locus_tag="CMS0424" /db_xref="GeneID:6156393" CDS 458556..459533 /locus_tag="CMS_0424" /old_locus_tag="CMS0424" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709201.1" /db_xref="GI:170780869" /db_xref="GeneID:6156393" /translation="MRSRSAGGRVTLDQPGTRVDPYPPEHHVTADIRRRSILAAVLAV PVTAVLAACTRQEPVPRATLGAGADGQPAASGSSPAVSSVEPASLSVSGGQTVTLTGA GLSGATAVMFAGTAGTDLQVAGDGSVTVVAPRSADYEDRFADIQVMAGDTPLTAATAA YAAQTPVDKQLQYALAHWDAYNLTEYGNFNSSGGDCVNFVSQSLIQRGWQMTNEWHNR GGGSDWTYAWIHVPTFDKWLAANASTLGVKRLELADRDQLKLGDIVIFDWNRNSSPDH TQIVSAIEPKDGGNVVKMVGHNLDNDYRDLDETITTEHPGAEVHFWSVA" gene complement(459541..460020) /locus_tag="CMS_0425" /old_locus_tag="CMS0425" /db_xref="GeneID:6156394" CDS complement(459541..460020) /locus_tag="CMS_0425" /old_locus_tag="CMS0425" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709202.1" /db_xref="GI:170780870" /db_xref="GeneID:6156394" /translation="MDAFVWDEPSMHPADGPAGAAPVLDRDVRLPDGHARRRIVALGS LLAVVVAGMVVTHSDGRGIWPDVFYAAAIHLALIAVMPRVDPVVHGAAVLVWCSGIEL LQITGWPAMWAVHVPLCRLLIGTGFDPVDLAAYAAGVLLVLLVDRLLRAGRGVGDVG" misc_feature complement(order(459586..459654,459697..459765, 459778..459837,459847..459906)) /locus_tag="CMS_0425" /old_locus_tag="CMS0425" /note="4 probable transmembrane helices predicted for CMS0425 by TMHMM2.0 at aa 39-58, 62-81, 86-108 and 123-145" gene complement(460103..461779) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /db_xref="GeneID:6156395" CDS complement(460103..461779) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /EC_number="5.4.2.2" /note="catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="YP_001709203.1" /db_xref="GI:170780871" /db_xref="GeneID:6156395" /translation="MGIGGGRCQDGSMHDRAGTAALPSDLIDLDELIRAYHDLHPDME DPEQKVAFGTSGHRGSSLKTAFNEDHILAITQAIVEYRAEQGITGPLFIGRDTHGLSR PAEDTALEVLVANGVRVLADSRDSWCPTPALSHAILRWNRDDAHGEDDVADGIVVTPS HNPPADGGFKYNPPHGGPADSDATGWIAARANAIIAGGLVDVKRVPLDEARASVEGYD FLGHYVDDLGSIIDMEAIKKAGVRIGADPLGGASVEYWAAIGERYGLDLEVVNPEVDP AWSFMTLDWDGRIRMDPSSASAMASVLARKDDFDILTGNDADADRHGIVTPDAGLMNP NHYLAVAIDYLYAHRPHWREDAAIGKTLVSSSVINRVAESLGRRLWEVPVGFKWFVPG LIDGSVGFGGEESAGASFLRMDGTVWTTDKDGILLALLASEIVAVTGKTPSALYRELT ERFGDPVYERVDAAATKAQKATLGKLDGDAIAATEVAGDPITAKLSTAPGNGAAVGGV KVVTENAWFAARPSGTEDVYKIYAESFVGLDHLHALQAEAKRIVDAALDA" misc_feature complement(460115..460378) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /inference="protein motif:HMMPfam:PF00408" /note="HMMPfam hit to PF00408,Phosphoglucomutase/phosphomannomutase C terminal, score 6e-08" misc_feature complement(460421..460783) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /inference="protein motif:HMMPfam:PF02880" /note="HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, score 1.8e-27" misc_feature complement(460787..461119) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /inference="protein motif:HMMPfam:PF02879" /note="HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, score 1.2e-21" misc_feature complement(461186..461635) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /inference="protein motif:HMMPfam:PF02878" /note="HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, score 1.1e-36" misc_feature complement(461276..461320) /gene="pgm" /locus_tag="CMS_0426" /old_locus_tag="CMS0426" /note="PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature." gene 461793..462761 /gene="pheA" /locus_tag="CMS_0427" /old_locus_tag="CMS0427" /db_xref="GeneID:6158863" CDS 461793..462761 /gene="pheA" /locus_tag="CMS_0427" /old_locus_tag="CMS0427" /EC_number="4.2.1.51" /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /protein_id="YP_001709204.1" /db_xref="GI:170780872" /db_xref="GeneID:6158863" /translation="MPETPRPDETYSYLGPAGTFTEAALKQVDAARGRTWRAVNNASE ALADVVAGTSVAAMIAIENSVEGGVTATQDALANIPGLRILSEHLVPVSFDLVVRPGT ALADVRTVAAHPVAYGQCRRFLERELRTHGHVPATSNVAAALSLLECGIADAAIAPPQ ITESQPLEAVARGIGDNLNAVTRFVLVGRATALPARTGADKTSLIIELPDDRAGSLLD LLEQFATRGVNLALIQSRPIGDELGRYRFVIDAEGHVHDERVADALLGIRRFSPRVTF LGSYPRADGTPSTYRARYEDDVFLEARDWLRGILSAEPGAGADAGT" misc_feature 461829..462368 /gene="pheA" /locus_tag="CMS_0427" /old_locus_tag="CMS0427" /inference="protein motif:HMMPfam:PF00800" /note="HMMPfam hit to PF00800, Prephenate dehydratase,score 2.2e-37" misc_feature 462396..462614 /gene="pheA" /locus_tag="CMS_0427" /old_locus_tag="CMS0427" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1.5e-06" gene complement(462758..464014) /locus_tag="CMS_0428" /old_locus_tag="CMS0428" /db_xref="GeneID:6158864" CDS complement(462758..464014) /locus_tag="CMS_0428" /old_locus_tag="CMS0428" /codon_start=1 /transl_table=11 /product="putative amino acid transporter" /protein_id="YP_001709205.1" /db_xref="GI:170780873" /db_xref="GeneID:6158864" /translation="MLGAGIYALMGTLAEDVGGALWVPLVVALLLALLTAGSYAELVT KYPKAGGAAIFAERAFKLPVVSFLVGFSMLAAGVVSAAGLSLAFAGEYLSTLLAPVMD VPRIPAAIVFLLLVAALNARGITESMRGNVVMTVIELSGLVIVIVVVAVMLGGGGGDV SRVTEFPEGSNAALATLSAAIVAYYSFVGFETSANVAEEVRDPSRVYPKALFGALATA GVVYVLVALASSAALPAEELAESTGPLLAVVQATGAGIPPWVFSLIALVAVANGALLT MIMASRVTFGMSEQGLLPGVLGRVLPRRRTPWVAIVVTTLVAIGLTAVGDVGTLAETV VLLLLFVFISTNVAVLVLRKDRVDHAHFRVWTAIPVLGTLSCVLLLTQQSGQVWLFGA ILVAVGIVLYLLSRVTGARSRPVDRG" misc_feature complement(462761..464014) /locus_tag="CMS_0428" /old_locus_tag="CMS0428" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 1.1e-07" misc_feature complement(order(462794..462862,462872..462940, 462959..463027,463040..463093,463190..463258, 463316..463384,463445..463498,463541..463609, 463643..463702,463760..463828,463889..463957)) /locus_tag="CMS_0428" /old_locus_tag="CMS0428" /note="11 probable transmembrane helices predicted for CMS0428 by TMHMM2.0 at aa 20-42, 63-85, 105-124, 136-158,173-190, 211-233, 253-275, 308-325, 330-352, 359-381 and 385-407" gene 464259..465539 /locus_tag="CMS_0429" /old_locus_tag="CMS0429" /db_xref="GeneID:6156396" CDS 464259..465539 /locus_tag="CMS_0429" /old_locus_tag="CMS0429" /note="catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase" /protein_id="YP_001709206.1" /db_xref="GI:170780874" /db_xref="GeneID:6156396" /translation="MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRQAITE FEGLRAEQNAHGKLVAKADKADKPRLIAEVQELKARVTAAQERAQQAEAALDEAMRRI PNIVIDGVPAGGEDDWALLREVGEKAAFDFEPRDHLEIGEILDAIDMGRGAKVSGARF HFLKGIGARLEIALMNFGLARALEAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLD DDDLYLTGTSEVALAGYHADEILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQ FQKLEMFSYVDPADAEAEHERLLAMQERMMQDLGLAYRVIDTAAGDLGSSAARKYDVE AWIPTQGAYRELTSTSNCTTFQARRLGTRFRGEDGRTSPVATLNGTLATTRWIVAILE THQRADGSVRVPEALRPYLGGLEVLEPATAKAAR" misc_feature 464259..464576 /locus_tag="CMS_0429" /old_locus_tag="CMS0429" /inference="protein motif:HMMPfam:PF02403" /note="HMMPfam hit to PF02403, Seryl-tRNA synthetase,class IIa, score 2.7e-33" misc_feature 464733..465197 /locus_tag="CMS_0429" /old_locus_tag="CMS0429" /inference="protein motif:HMMPfam:PF00587" /note="HMMPfam hit to PF00587, tRNA synthetases, class-II (G, H, P and S), score 1.3e-48" misc_feature 465027..465101 /locus_tag="CMS_0429" /old_locus_tag="CMS0429" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." gene 465536..466357 /locus_tag="CMS_0430" /old_locus_tag="CMS0430" /db_xref="GeneID:6156397" CDS 465536..466357 /locus_tag="CMS_0430" /old_locus_tag="CMS0430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709207.1" /db_xref="GI:170780875" /db_xref="GeneID:6156397" /translation="MTPRVSDADRLLIALDIDGTLLGEDGSLDESVIREVRRMEEIGH LVMPSTGRSVADTLPIVDRLGIHPRYMVCSNGAIVLERDADAPAGYSRRFVETFDPAD VLQRIHPHLASGRYAVEDEHGVYLYAGGDFPDGALEANGRQVEFEELLHVPATRVVVI SPGHDMEDFQDVVERMGLHRVSYSIGWTAWLDIAPDGVNKATAMERVRELHGIDRTHV FAMGDGRNDIEMLVWAGEHGRGIAMGQAPAEVIAVASEVTGPITENGAAAVLARL" gene 466519..466603 /locus_tag="CMS_r037" /old_locus_tag="CMSr037" /db_xref="GeneID:6156398" tRNA 466519..466603 /locus_tag="CMS_r037" /old_locus_tag="CMSr037" /product="tRNA-Ser" /note="codon recognized: UCA; tRNA Ser anticodon TGA, Cove score 46.79" /anticodon=(pos:466553..466555,aa:Ser) /db_xref="GeneID:6156398" gene 466620..467879 /locus_tag="CMS_0431" /old_locus_tag="CMS0431" /db_xref="GeneID:6159059" CDS 466620..467879 /locus_tag="CMS_0431" /old_locus_tag="CMS0431" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709208.1" /db_xref="GI:170780876" /db_xref="GeneID:6159059" /translation="MSDAPLRPRRTATTPVIARHGRLGRPSAARTLVKGIAMGVAVLL VSGLSVGTIALWDLNKSVQANTVDISDGTEQTTVGVGALDGGFNVLLAGSDTRQGQGD GYGKTDGALNDVNMVLHVSADHSQATVVSLPRDMVVPIPACARSDGSGTAPAMSAAPL NSALSDGGLPCVAKTVAQFTGLDIPYAALIEFNGVIEMSNAVGGVPVCLASPLKDKRT DLDLPAGENTLQGKEALQFLRTRHAVGDGSDLARISNQQVFLSALVRTMKQSSTLSDP TRVYGLAKAAVDNMQRSTSLDYQTMASMALALKDIPLDQVRFLQYPGTTSGTGVYAGK VQPLKADGDQLMQLLKADAPFEVKAGNTGLGAVEEQPAASTLTPSPSAPAAASGSQPA TSAPTVLPEAVTGTDAGTVTCSKGFKG" sig_peptide 466620..466811 /locus_tag="CMS_0431" /old_locus_tag="CMS0431" /note="Signal peptide predicted for CMS0431 by SignalP 2.0 HMM (Signal peptide probability 0.707) with cleavage site probability 0.569 between residues 64 and 65" misc_feature 466713..466781 /locus_tag="CMS_0431" /old_locus_tag="CMS0431" /note="1 probable transmembrane helix predicted for CMS0431 by TMHMM2.0 at aa 32-54" misc_feature 466950..467426 /locus_tag="CMS_0431" /old_locus_tag="CMS0431" /inference="protein motif:HMMPfam:PF03816" /note="HMMPfam hit to PF03816, Cell envelope-related transcriptional attenuator, score 4e-54" gene 468300..468388 /locus_tag="CMS_r038" /old_locus_tag="CMSr038" /db_xref="GeneID:6156399" tRNA 468300..468388 /locus_tag="CMS_r038" /old_locus_tag="CMSr038" /product="tRNA-Ser" /note="codon recognized: AGC; tRNA Ser anticodon GCT, Cove score 48.77" /anticodon=(pos:468336..468338,aa:Ser) /db_xref="GeneID:6156399" gene 468453..469019 /locus_tag="CMS_0432" /old_locus_tag="CMS0432" /db_xref="GeneID:6159060" CDS 468453..469019 /locus_tag="CMS_0432" /old_locus_tag="CMS0432" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709209.1" /db_xref="GI:170780877" /db_xref="GeneID:6159060" /translation="MAQYARRMDRQMLDQLSTGRSRRDVQAIREALSALTAGDLVSVV IRSPRYGLHSVDGPVRVGSNGQLVVADTALGAAGEIQSVSIRSGDDMPPQGGLPDSVV GLGHGTVARVTFDEPAYGAFHVTGPLTAGDDAFLLVSNWIVVNGDAFAPRVVSVEVAD DLDVHPANVPPRRPSVEDAVAPAPGPTA" gene 469117..470079 /locus_tag="CMS_0433" /old_locus_tag="CMS0433" /db_xref="GeneID:6156400" CDS 469117..470079 /locus_tag="CMS_0433" /old_locus_tag="CMS0433" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709210.1" /db_xref="GI:170780878" /db_xref="GeneID:6156400" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 469189..469254 /locus_tag="CMS_0433" /old_locus_tag="CMS0433" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 469513..470055 /locus_tag="CMS_0433" /old_locus_tag="CMS0433" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-41" gene 470156..471244 /locus_tag="CMS_0434" /old_locus_tag="CMS0434" /db_xref="GeneID:6156401" CDS 470156..471244 /locus_tag="CMS_0434" /old_locus_tag="CMS0434" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001709211.1" /db_xref="GI:170780879" /db_xref="GeneID:6156401" /translation="MTDTFPDAPRPSDPEHGAGTTLGLIAREANVSIGTVSKVLNGRK GISPATRSRVEELMELHGYSRRGAERPHGALIEIVLEVVDTGFSVDLLRGVSAVAREH SLSVIVTEHGRDNALDGDWMAGVMQRRPMGLVLVFSDLAPAQKRQLRSRGIPFVVVDP AGSPAADVPAVGSTNWEGGHAAGEHLLGLGHTRIGAISGPRHRLYSRARMSGFRSALE AAGPAVSLVEAEGDYGRVAGYRAGGELLDGEARPTAIFAGNDEQALGLYEAARERGIR VPDDLSVLGYDDLPFARIVSPALSTIRQPVREMAEAAARMVLRIREGRSDEATRLDLA TALVVRASTAAPAAPAAPAATDAVSPPE" misc_feature 470213..470278 /locus_tag="CMS_0434" /old_locus_tag="CMS0434" /note="Predicted helix-turn-helix motif with score 1648.000, SD 4.80 at aa 20-41, sequence TTLGLIAREANVSIGTVSKVLN" misc_feature 470372..471193 /locus_tag="CMS_0434" /old_locus_tag="CMS0434" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 4.7e-11" gene 471416..472114 /locus_tag="CMS_0435" /old_locus_tag="CMS0435" /db_xref="GeneID:6156402" CDS 471416..472114 /locus_tag="CMS_0435" /old_locus_tag="CMS0435" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709212.1" /db_xref="GI:170780880" /db_xref="GeneID:6156402" /translation="MTAARKALVVRGGWDGHMPVETTGLFIPFLEENGFEVRVEEGSA VYADAAAMAETDLIVQANTMTTIEPEEMAGLYAAVVAGTGMAGWHGGIADSYRNTADY LHMIGGQFAHHAGKDPAERTGEQSDNYIPYTVEMTELGRTHEITRGIADFDLVTEQYW VLSDEYNDVLATTTQTVRPWDPWHRPVTAPAIWTRQWGEGRIFVSAPGHRIEVVEDPN VRTIIERGLLWAAR" gene 472132..473208 /locus_tag="CMS_0436" /old_locus_tag="CMS0436" /db_xref="GeneID:6156403" CDS 472132..473208 /locus_tag="CMS_0436" /old_locus_tag="CMS0436" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709213.1" /db_xref="GI:170780881" /db_xref="GeneID:6156403" /translation="MTLGIIGVGKISEQYFAAFETLSGVRLVAVADLDLDRARTVAEA QGVDALSVDDLIADPRIDTVLNLTIPAAHAEVDLRVLEAGKHVYGEKPLALSPAEAAP ILRLAEEKGLRVGSAPDTVLGTGIQTARAVLDAGTIGKPVAANAFWGAPGHELWHPAP AFYYQPGAGPMFDMGPYYLTALVTLLGPVTRVQGASLRSDRVRSAASDPEAREIPVTV DTHVSAVLTHASGAVSTVTMSFDIWATRIPNIEVYGTAGTLSVPDPNHFSGQVQVATS TDREWADVEPSAGFVDAGRGCGLAEMADAIRRGVPHRASGELAFHVLEVMDAILDPEA TGEIRSSVGRPEAVPLGQPGRSGD" misc_feature 472132..472485 /locus_tag="CMS_0436" /old_locus_tag="CMS0436" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 4.4e-25" misc_feature 472519..472860 /locus_tag="CMS_0436" /old_locus_tag="CMS0436" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 0.061" gene 473300..473647 /locus_tag="CMS_0437" /old_locus_tag="CMS0437" /db_xref="GeneID:6156404" CDS 473300..473647 /locus_tag="CMS_0437" /old_locus_tag="CMS0437" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709214.1" /db_xref="GI:170780882" /db_xref="GeneID:6156404" /translation="MTRHFSQFLFAPYGDGEGLRAVEADDEQLLGVDAHDDPREPEAD VTDPAVWPALTAVEWPLTHRPFGDDDEPEIADGHFAPADQDPDGEAQEEAAAHAARAA LLAEVYGWPHRAI" gene complement(473693..475048) /locus_tag="CMS_0438" /old_locus_tag="CMS0438" /db_xref="GeneID:6156405" CDS complement(473693..475048) /locus_tag="CMS_0438" /old_locus_tag="CMS0438" /codon_start=1 /transl_table=11 /product="putative alpha amylase" /protein_id="YP_001709215.1" /db_xref="GI:170780883" /db_xref="GeneID:6156405" /translation="MASWTDHVVWWHVYPLGFTGAPQTRDDLAGPGGGSPAHPDAAPA HRLDRLRAWLPYLVDLGTNGLLLGPVFDSETHGYDTRDHLVVDPRLGDDADLDALLAD ASARGVRVLLDGVFNHVGRSHPRFVQALADGPGSEAASWFRWDEAGEPVGFEGHGALV TLDHDSEAVRAHVAEVMIHWLDRGISGWRLDAAYAVPASFWAAVLPRVRERHPDAWFV GEMIHGDYVGYQAESTIDSITAYELWKSIRNSIAERNLFELDWTLTRHAELLPSFTPQ TFIGNHDVTRIASAVAPRHLGHAVALLLLLPGIPSIYAGDERGLTGVKEDRAGGDDAV RPAYPASPDELHDDEHAARIRSLHQELIGLRRRHAWLVDARMETSGLANTALTITLRP SGTGAAAGVAPGSPDALRLVLNLGEEPMEIAGSPDGREAGDVSGDGRVPGHSWAVLAG A" misc_feature complement(473954..475015) /locus_tag="CMS_0438" /old_locus_tag="CMS0438" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 1.9e-44" gene 475239..475311 /locus_tag="CMS_r010" /old_locus_tag="CMSr010" /db_xref="GeneID:6156406" tRNA 475239..475311 /locus_tag="CMS_r010" /old_locus_tag="CMSr010" /product="tRNA-Arg" /note="codon recognized: CGU; tRNA Arg anticodon ACG, Cove score 77.20" /anticodon=(pos:475272..475274,aa:Arg) /db_xref="GeneID:6156406" gene complement(475415..475771) /locus_tag="CMS_0439" /old_locus_tag="CMS0439" /pseudo /db_xref="GeneID:6159029" misc_feature complement(475457..475630) /locus_tag="CMS_0439" /old_locus_tag="CMS0439" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 3.7e-21" /pseudo misc_feature complement(475496..475579) /locus_tag="CMS_0439" /old_locus_tag="CMS0439" /note="PS00622 Bacterial regulatory proteins, luxR family signature." /pseudo gene complement(475684..476748) /locus_tag="CMS_0440" /old_locus_tag="CMS0440" /db_xref="GeneID:6156407" CDS complement(475684..476748) /locus_tag="CMS_0440" /old_locus_tag="CMS0440" /note="Frameplot suggests that this CDS does not have a legitimate translational stop" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709216.1" /db_xref="GI:170780884" /db_xref="GeneID:6156407" /translation="MNTADPTLDTRIQAFAAAVRARLADLDAEDVDDLTGGLEADLQE EAADHDGALELGDPVRYADELRSSAGLPERAVAAAPLSPIAQMRESMRARGRDVHARI RANRELSAILDLLILFRPVWWLLRAWAGYLCFVTVIFGGFSVLPRNPAAWVLLIALVV ISVQWGRGNWVRSAPARTLKATISVITAASLVVLIPVSIDEMAPRSYAESAYPSSYQQ PGLSLDGKALTNLFAYDADGNLLDRVQLFDQDGEPVTTVSSVMDDGRLTDPVTGERMK PADGAWNVFPLERDLLATSDGATATGSGAVRPPFAKALPLRAGPGSTPTPTPSPGGAT GDAPAATPTATPTPTPEPTP" misc_feature complement(order(476236..476304,476317..476385)) /locus_tag="CMS_0440" /old_locus_tag="CMS0440" /note="2 probable transmembrane helices predicted for CMS0440 by TMHMM2.0 at aa 122-144 and 149-171" gene complement(476745..477161) /locus_tag="CMS_0441" /old_locus_tag="CMS0441" /db_xref="GeneID:6156408" CDS complement(476745..477161) /locus_tag="CMS_0441" /old_locus_tag="CMS0441" /codon_start=1 /transl_table=11 /product="PadR family transcriptional regulator" /protein_id="YP_001709217.1" /db_xref="GI:170780885" /db_xref="GeneID:6156408" /translation="MDTTQLLKGALDTAVLAVVQHDDGYGYDIVRRLRDAGLGDVGDA SVYGTLRRLYAAGALSSYVVPSEGGPHRKYYAINPEGRELLAGQRATWAAFATAMSGL LGEPAPAPTHRTRKAGGAGEGPVPASVNVRTIGEKP" misc_feature complement(476898..477149) /locus_tag="CMS_0441" /old_locus_tag="CMS0441" /inference="protein motif:HMMPfam:PF03551" /note="HMMPfam hit to PF03551, Transcriptional regulator PadR-like, score 1e-19" gene 477274..477675 /locus_tag="CMS_0442" /old_locus_tag="CMS0442" /db_xref="GeneID:6156409" CDS 477274..477675 /locus_tag="CMS_0442" /old_locus_tag="CMS0442" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709218.1" /db_xref="GI:170780886" /db_xref="GeneID:6156409" /translation="MAGTGGRPGPRARPPLVLAPGPVLPSGMPIVLEVLGRVLALVGD VVLGGAGVTPAILLAALLGAASVAAAVALVRIAAARGLLGSAAPPLRPDEDVDLPVLV SSSDPDADGHERSRAPGRRMQVVVPAPLPAA" misc_feature 477427..477495 /locus_tag="CMS_0442" /old_locus_tag="CMS0442" /note="1 probable transmembrane helix predicted for CMS0442 by TMHMM2.0 at aa 52-74" gene 477779..478546 /locus_tag="CMS_0443" /old_locus_tag="CMS0443" /db_xref="GeneID:6156410" CDS 477779..478546 /locus_tag="CMS_0443" /old_locus_tag="CMS0443" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709219.1" /db_xref="GI:170780887" /db_xref="GeneID:6156410" /translation="MDPTSIAPVRAVLDGLSQLVVGLADLIHPLAGASATGVAVILLT LVVRAVLVPVGVAQVRAEIQRLRIAPALAELRRRHAGKPEQMSRAVQELYAREGASPL AGCLPTLAQAPVLAAVYTLFAHARIGGEANALLAAPFAGLPLGSNALAAAGMGVAPLV VSLVVLGLLAVVIEVRRRADLRFQGPPAAADPALPGMAGMTAMTRVLPFVTVVFAGVA PLAAALYLLSSAAWTLLERAALRRLLGRARATGTAPA" misc_feature order(477881..477949,478079..478147,478229..478297, 478394..478462) /locus_tag="CMS_0443" /old_locus_tag="CMS0443" /note="4 probable transmembrane helices predicted for CMS0443 by TMHMM2.0 at aa 35-57, 101-123, 151-173 and 206-228" misc_feature 477887..478513 /locus_tag="CMS_0443" /old_locus_tag="CMS0443" /inference="protein motif:HMMPfam:PF02096" /note="HMMPfam hit to PF02096, 60 kDa inner membrane protein, score 5.5e-14" gene 478656..479519 /locus_tag="CMS_0444" /old_locus_tag="CMS0444" /db_xref="GeneID:6156411" CDS 478656..479519 /locus_tag="CMS_0444" /old_locus_tag="CMS0444" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709220.1" /db_xref="GI:170780888" /db_xref="GeneID:6156411" /translation="MTYPAGSVASAGTVLRVDDLADGTRAVVLDETACHPVDAAWPDQ PADRAVLRVRGAGIEVLDCVVGAASTDPAGDAALHVGADVPVKKGADGWSFVAVHVVP GDADVRAGDAVEVAVDPEHRRALSAGHTGCHLASLALDRALEGAWNKDVPRDALGAPG FDALAIGTSRIGPWSSVDTYRLGKSLRKKGFVPAALLDQLEEVRGRVDATLAAWVASG AAARIEREGDLLTSRRSWVCELPDGTARIPCGGTHVSGLDELASVTVDLDVEEADGAV VVRMRTTCVPA" gene 479632..480174 /locus_tag="CMS_0445" /old_locus_tag="CMS0445" /db_xref="GeneID:6156412" CDS 479632..480174 /locus_tag="CMS_0445" /old_locus_tag="CMS0445" /codon_start=1 /transl_table=11 /product="putative hydophilic protein" /protein_id="YP_001709221.1" /db_xref="GI:170780889" /db_xref="GeneID:6156412" /translation="MVSNVAATPATKCSVCGKANPVGMATGNILDHGRNHERCPGSGK PPAVSTKPASAAAKSGTAPSRKPASDAAKREPSRKTTPAKAAGPTRGVTVRRVEVDTE RLRLREEKLERIRVQREEAARRRLGDYIVPLDADGQEAPEADITLETMDDEALAAVEP GASTESDVATADAADGRPSA" gene complement(480185..481147) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /db_xref="GeneID:6156413" CDS complement(480185..481147) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709222.1" /db_xref="GI:170780890" /db_xref="GeneID:6156413" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(480197..480739) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(480824..480889) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(480889..481010) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(481010..481075) /locus_tag="CMS_0446" /old_locus_tag="CMS0446" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 481284..482318 /locus_tag="CMS_0447" /old_locus_tag="CMS0447" /db_xref="GeneID:6156414" CDS 481284..482318 /locus_tag="CMS_0447" /old_locus_tag="CMS0447" /codon_start=1 /transl_table=11 /product="putative aldoketoreductase" /protein_id="YP_001709223.1" /db_xref="GI:170780891" /db_xref="GeneID:6156414" /translation="MTEQSTDQPTTHLGRTGVEVSRLCLGTMMFGAWGETDHEKSIRV IHRAIDAGITFIDTADIYAYGESEEIVGTAIAQSGRRDDLVLATKFFNGMKPEANHRG GSRRWIVRAVEDSLRRLGTDYIDLYQMHRPDEHTDIEETLGALTDLVRAGKVRYIGSS TFQPSQVVEAQWIARERGTARFVTEQPPYSLLTRGVEADLLPTTERHGMGTLVWSPLA GGWLSGKYRKGQEIPKTHRNDRDPSRYDPADPKFEAADQLGALADELGVPLVHLALAF VLRHPAVSSAIIGPRTMEQLESQLDAATLELDAATLDRIDEIVPPGLNVNPADTGFSN YWLDPARRRR" misc_feature 481323..482243 /locus_tag="CMS_0447" /old_locus_tag="CMS0447" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 9.1e-72" gene 482522..483271 /locus_tag="CMS_0448" /old_locus_tag="CMS0448" /db_xref="GeneID:6156415" CDS 482522..483271 /locus_tag="CMS_0448" /old_locus_tag="CMS0448" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001709224.1" /db_xref="GI:170780892" /db_xref="GeneID:6156415" /translation="MYGTAVVLGRALFGSLRLRLVADGRDRIPDTGGAVIAMTHFGYL EFALVEWATWLHNRRRIRFMAKKGAFDTPGVGWVLRRMRHISVDMTAGAAAYEDAVAA LRAGELIGVFPEAGVSASFRVRELKTGAARLAAEAGVPIVPVAVWGGHRLLTKNRRIR MRDRIGVPVHLRVGERIPVAADADPREVTDALREELQGLVDDLQSAYPVDGRGAWWQP RHRGGTAPTPEEAAAADAERDERRRRRAEGR" misc_feature 482576..482962 /locus_tag="CMS_0448" /old_locus_tag="CMS0448" /inference="protein motif:HMMPfam:PF01553" /note="HMMPfam hit to PF01553, Phospholipid/glycerol acyltransferase, score 1.5e-31" misc_feature 482618..482686 /locus_tag="CMS_0448" /old_locus_tag="CMS0448" /note="1 probable transmembrane helix predicted for CMS0448 by TMHMM2.0 at aa 33-55" gene complement(483565..484050) /locus_tag="CMS_0449" /old_locus_tag="CMS0449" /db_xref="GeneID:6156416" CDS complement(483565..484050) /locus_tag="CMS_0449" /old_locus_tag="CMS0449" /EC_number="4.1.1.11" /note="Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)" /codon_start=1 /transl_table=11 /product="aspartate alpha-decarboxylase" /protein_id="YP_001709225.1" /db_xref="GI:170780893" /db_xref="GeneID:6156416" /translation="MIAPAITVLRRRAHGRRPSRGARMLRTMMTAKIHRATVSHADLH YVGSVTVDRDLLDAADILVGERVSIVDVTNGARLDTYTIAGERGSGVLGINGAAARLV DVGDTVILIAYGQMTTEEARALEPRVVHVDAANCIRAVDADPTAPPAPGLERPPLAEP V" misc_feature complement(483634..483981) /locus_tag="CMS_0449" /old_locus_tag="CMS0449" /inference="protein motif:HMMPfam:PF02261" /note="HMMPfam hit to PF02261, Aspartate decarboxylase,score 5.2e-65" gene 484260..485351 /locus_tag="CMS_0450" /old_locus_tag="CMS0450" /db_xref="GeneID:6156417" CDS 484260..485351 /locus_tag="CMS_0450" /old_locus_tag="CMS0450" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709226.1" /db_xref="GI:170780894" /db_xref="GeneID:6156417" /translation="MARRDTAGTIEDRPDEDDARKPDSPTEIEKPSWKYVLRKTMREF GTDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGESTVSAVLDLLRGFAPADALA LIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFSRAMNRIYEIPEGRPFWKLKP TQLAVTVIGIVLLLVCALIIAISGPVTDAIGEALGLGQTVQIVWSIAKWPVLAFAIVL LIAILYYATPNAKQPKFRWMSMGAAIALVVLVIASVAFAFYVTEFSSYAKSYGALAGV VVFLLWLWIANLALLFGAEFDAELERGRQLQAGIAAEETLQLPPRDTAVSDKKAAAER EDVKRGRGIRERHERAERLGGGGDAGDGA" misc_feature 484392..485171 /locus_tag="CMS_0450" /old_locus_tag="CMS0450" /inference="protein motif:HMMPfam:PF03631" /note="HMMPfam hit to PF03631, Ribonuclease BN, score 1.9e-58" misc_feature order(484425..484493,484608..484676,484752..484820, 484863..484931,484968..485036,485073..485141) /locus_tag="CMS_0450" /old_locus_tag="CMS0450" /note="6 probable transmembrane helices predicted for CMS0450 by TMHMM2.0 at aa 56-78, 117-139, 165-187,202-224, 237-259 and 272-294" gene complement(485394..486920) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /db_xref="GeneID:6156418" CDS complement(485394..486920) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /codon_start=1 /transl_table=11 /product="putative deoxyribodipyrimidine photolyase" /protein_id="YP_001709227.1" /db_xref="GI:170780895" /db_xref="GeneID:6156418" /translation="MSDDDAPDHGSADREGADQAHGPTIVWLRDDLRVADNPAMHAAV ERGEPIVVLYVLDEESAGIRPLGGAARWWLHMSLSRLGESLRGLGSPLVLRRGKAADV VDDLVREVGAGAVLWNRRYGGAEIAVDTAIKKDLGDRGLDVRSFQGSLLVEPWTVVNK QGEPFRVYTPFWKTAQDREEPRKPFPAPDALEAPRKAPRSDDLDDWGLLPTKPDWAAG LREACDPGEAAGLQRLEDFVHHELEDYAAQRDEPAAMTTSRLSAYLRWGEVSPFQVWH RVQRTRGKKVGGDEVNATKFLSELGWREFSYHLLYHQPDLATRNFVPRFDAFPWDEPR DDTLGAWQRGETGVPLVDAGMRALWKDGHLHNRVRMVVASFLIKNLLIDWRHGEQWFW DTLVDADAANNAASWQWVAGSGADAAPYFRVFNPVLQGQKFDPSGEYIRSYVPELAHA PRDVVHEPWKAQGDLVASAEDDADASADGGLAAYPSPIVDLKESRQRALAAYDEIKDR" misc_feature complement(485403..486251) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /inference="protein motif:HMMPfam:PF03441" /note="HMMPfam hit to PF03441, DNA photolyase,FAD-binding, score 1.6e-112" misc_feature complement(485766..485825) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /note="PS00691 DNA photolyases class 1 signature 2." misc_feature complement(485847..485885) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /note="PS00394 DNA photolyases class 1 signature 1." misc_feature complement(486327..486857) /locus_tag="CMS_0451" /old_locus_tag="CMS0451" /inference="protein motif:HMMPfam:PF00875" /note="HMMPfam hit to PF00875, DNA photolyase, N-terminal,score 4e-41" gene 487066..488458 /locus_tag="CMS_0452" /old_locus_tag="CMS0452" /pseudo /db_xref="GeneID:6156419" misc_feature order(487931..487999,488231..488299,488336..488404) /locus_tag="CMS_0452" /old_locus_tag="CMS0452" /note="3 probable transmembrane helices predicted for CMS0452 by TMHMM2.0 at aa 224-246, 324-346 and 359-381" /pseudo gene complement(488469..489431) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /db_xref="GeneID:6156420" CDS complement(488469..489431) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /note="N/R/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709228.1" /db_xref="GI:170780896" /db_xref="GeneID:6156420" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(488481..489023) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(489108..489173) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(489173..489294) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(489294..489359) /locus_tag="CMS_0453" /old_locus_tag="CMS0453" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(489529..490365) /locus_tag="CMS_0454" /old_locus_tag="CMS0454" /db_xref="GeneID:6156421" CDS complement(489529..490365) /locus_tag="CMS_0454" /old_locus_tag="CMS0454" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709229.1" /db_xref="GI:170780897" /db_xref="GeneID:6156421" /translation="MTPPTRSTRRPHASRDARRTRLTFRRATHAELLKLATLRSTRWT AVLVVLAGVGISVAASLVANPMPAGASSTMADAGTAAILTTPLLLSQIVVGVLGVLAM GSEYSSGTIASTLAAVPDRLEALSAKALAVALVAFGLGVIPGLGAYLLTAGTRADVGY DGSLASWGVLGPLLGSGAYLAMVALLGLALATMMRSGVAAITALIAIQLVLPQLVALV PDIGDVAVYDLLLTTAGRILTGTTGSIAPPPTTLLEVAATAAWLVIPATAAALLFRRR DA" sig_peptide complement(489664..489738) /locus_tag="CMS_0454" /old_locus_tag="CMS0454" /note="Signal peptide predicted for CMS0454 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.529 between residues 25 and 26" misc_feature complement(order(489547..489615,489712..489780, 489799..489867,489910..489978,490063..490131, 490159..490227)) /locus_tag="CMS_0454" /old_locus_tag="CMS0454" /note="6 probable transmembrane helices predicted for CMS0454 by TMHMM2.0 at aa 2-24, 34-56, 85-107, 122-144,151-173 and 206-228" gene complement(490501..490860) /locus_tag="CMS_0455" /old_locus_tag="CMS0455" /db_xref="GeneID:6156422" CDS complement(490501..490860) /locus_tag="CMS_0455" /old_locus_tag="CMS0455" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709230.1" /db_xref="GI:170780898" /db_xref="GeneID:6156422" /translation="MADDTPDARSTGTLWMVIGLVSGPLLVTGAGISPWISAALFALS VFMYVRVRGRDRALAAPPTGTLWFVVSLIIGALLVTGSFDPPWVGAAALAGSVLLYVR AMIRLAARPATDPDPGD" misc_feature complement(order(490546..490614,490624..490692, 490750..490818)) /locus_tag="CMS_0455" /old_locus_tag="CMS0455" /note="3 probable transmembrane helices predicted for CMS0455 by TMHMM2.0 at aa 15-37, 57-79 and 83-105" gene complement(490887..491435) /locus_tag="CMS_0456" /old_locus_tag="CMS0456" /db_xref="GeneID:6156423" CDS complement(490887..491435) /locus_tag="CMS_0456" /old_locus_tag="CMS0456" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709231.1" /db_xref="GI:170780899" /db_xref="GeneID:6156423" /translation="MDRVASMTRHPGDRVLAVLIDWLFLCVWSALVAAVAVPLLVVGA TMPLPPVAANVLAALATVVPITIVLAVLESGPRQATPGKRARRLVVQDARTGDALPFR RALLRNALKVALPWTVGHVAAYAIVGTSDSLGSVPPGVEAVTVIAYVLPAVWLLTLLI GSGRTPYDRIAGTVVARSAPRA" sig_peptide complement(490887..491057) /locus_tag="CMS_0456" /old_locus_tag="CMS0456" /note="Signal peptide predicted for CMS0456 by SignalP 2.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.533 between residues 57 and 58" misc_feature complement(490905..491414) /locus_tag="CMS_0456" /old_locus_tag="CMS0456" /inference="protein motif:HMMPfam:PF06271" /note="HMMPfam hit to PF06271, RDD, score 7.4e-10" misc_feature complement(order(490953..491021,491049..491102, 491220..491288,491298..491366)) /locus_tag="CMS_0456" /old_locus_tag="CMS0456" /note="4 probable transmembrane helices predicted for CMS0456 by TMHMM2.0 at aa 24-46, 50-72, 112-129 and 139-161" gene complement(491478..492122) /locus_tag="CMS_0457" /old_locus_tag="CMS0457" /db_xref="GeneID:6156424" CDS complement(491478..492122) /locus_tag="CMS_0457" /old_locus_tag="CMS0457" /codon_start=1 /transl_table=11 /product="putative lipolytic enzyme" /protein_id="YP_001709232.1" /db_xref="GI:170780900" /db_xref="GeneID:6156424" /translation="MVLNETLPVNSAWWREHAKTEGDLLYVALGDSTAQGIGASRPGS GYVGILADRIRALSGRSVRTVNLSVSGARVADLVEYQLPRLAKLRPDVVTLAIGANDI AAFEPVAFEHDLGRILDAVPPTTVVADLPCFHFPTSERKVRVANEIVRRLATDRGLRL APLHRITRRQTAVLALTQAAGDLFHPNDRGYRVWASAFLPFLPATVRALEVAGR" misc_feature complement(491529..492047) /locus_tag="CMS_0457" /old_locus_tag="CMS0457" /inference="protein motif:HMMPfam:PF00657" /note="HMMPfam hit to PF00657, Lipolytic enzyme, G-D-S-L,score 1.5e-15" gene complement(492309..493013) /locus_tag="CMS_0458" /old_locus_tag="CMS0458" /db_xref="GeneID:6156425" CDS complement(492309..493013) /locus_tag="CMS_0458" /old_locus_tag="CMS0458" /codon_start=1 /transl_table=11 /product="putative turgor pressure regulator" /protein_id="YP_001709233.1" /db_xref="GI:170780901" /db_xref="GeneID:6156425" /translation="MKILIADDDQQILRALRITLTSLGYDIVTAEDGAAAVRAAVAEK PDLYMIDLGMPRLDGVEVIQALRLWSTAPILVVSGRSGAADKVEALDAGADDYVTKPF SIDELLARIRALGRRAAADEDRGASVSFADVTVDLAARVVTRGDQRVRLTPTEWQVLE LLVRNPDRLVSRQALLTEIWGPTHVNDSGYLRLYVAQLRKKLEPDPAHPRHLLTDPGM GYRFVPAGAGRAPEDT" misc_feature complement(492348..492578) /locus_tag="CMS_0458" /old_locus_tag="CMS0458" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 3.3e-22" misc_feature complement(492657..493013) /locus_tag="CMS_0458" /old_locus_tag="CMS0458" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.5e-38" gene complement(493010..495406) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /db_xref="GeneID:6156426" CDS complement(493010..495406) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /codon_start=1 /transl_table=11 /product="putative turgor pressure sensor" /protein_id="YP_001709234.1" /db_xref="GI:170780902" /db_xref="GeneID:6156426" /translation="MLEGLEILPRREVSHRGVEITDLDVDAVIARRPTIALVDELAHT NAPGGRYKKRWQDVDLIRDAGIDVISTVNIQHIASLNDVVEKITGVPQRETIPDRVLR EAHQIEVIDLAPKALRDRLAGGRVYPAERIDAALSHYFRLGNLTALRELALLWLADEV DTALAAYRDEKGIDARWEARERVVVALTGGPEGETLLRRGARIAARSAGGELMAVHVS SQDGLRSGSPEALASQRALVDSLGGSYHQVVGDDIPRALVEFARASNATQLVLGVSRR SRLAAAATGPGIGATVIRESGDIDVHIVTHAAAGGRFRLPRVRGGALSMRRRILGGVL ALGGGPLLTWLLSATRSDDSITSDVLSYQLLVVLVALVGGIWPALFAAVLSGFTLDYF FIDPLYTITVDEPLHLLALVLYVVIALLVSWIVDQATRRTRLARLAVAEAELLATVSG SVLRGEGAVHALVSRTREAFGLQGVKLVDRDETIAWDGVVTGAAATDVPVGSRGVLTL YGDDLEASGRRLLRVIAAQLDAALEHRDLSDTAREVGPLAQTDRVRTALLSAVSHDLR RPLSAATAAVSALRSPGMTWADGDREELLATAEESLGTLADLVTDLLDVSRVQAGVLG VRLMDVDLDDVVLAALDELDLGPADAVLDLAPDLPGAVADPGLLERVVVNLLSNAVRH APDGVPVRLSTSAFADAVEIRVVDHGPGVAPERRDDMFVPFQRLGDTDNASGLGLGLA LSKGFTEGMGGTLTAEDTPGGGLTMVVALPACRADAPVPEPAEPALADPDTDSEQVSA" misc_feature complement(493091..493420) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2.3e-33" misc_feature complement(493484..493549) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /note="PS00445 FGGY family of carbohydrate kinases signature 2." misc_feature complement(493544..493750) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 9.1e-14" misc_feature complement(order(494132..494191,494249..494317, 494354..494422)) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /note="3 probable transmembrane helices predicted for CMS0459 by TMHMM2.0 at aa 329-351, 364-386 and 406-425" misc_feature complement(494492..494872) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /inference="protein motif:HMMPfam:PF00582" /note="HMMPfam hit to PF00582, UspA, score 3.1e-15" misc_feature complement(494927..495406) /locus_tag="CMS_0459" /old_locus_tag="CMS0459" /inference="protein motif:HMMPfam:PF02702" /note="HMMPfam hit to PF02702, Osmosensitive K+ channel His kinase sensor, score 8.6e-81" gene complement(495578..496186) /locus_tag="CMS_0460" /old_locus_tag="CMS0460" /db_xref="GeneID:6156427" CDS complement(495578..496186) /locus_tag="CMS_0460" /old_locus_tag="CMS0460" /codon_start=1 /transl_table=11 /product="putative cation transport ATPase component" /protein_id="YP_001709235.1" /db_xref="GI:170780903" /db_xref="GeneID:6156427" /translation="MSSPRQSLRTAGVAVRAMAVLTVVLGVGYTAVVTGIGQLALPAQ ADGSLVSVDGQVVGSSLIGQSFQDSDGTALPEWFQSRPSAAGDGYDASASSGSNLGPE NADLVASIEERKAAIAASDGVDPRTIPADALTASASGLDPHISPEYAREQVARAASAR GIPEQQVERLVDEHVQGRDLGYLGEPTVNVLELNIALAGLGG" sig_peptide complement(495578..495712) /locus_tag="CMS_0460" /old_locus_tag="CMS0460" /note="Signal peptide predicted for CMS0460 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.971 between residues 45 and 46" misc_feature complement(495587..496165) /locus_tag="CMS_0460" /old_locus_tag="CMS0460" /inference="protein motif:HMMPfam:PF02669" /note="HMMPfam hit to PF02669, K+ transporting ATPase,KdpC subunit, score 3.3e-66" misc_feature complement(496085..496153) /locus_tag="CMS_0460" /old_locus_tag="CMS0460" /note="1 probable transmembrane helix predicted for CMS0460 by TMHMM2.0 at aa 12-34" gene complement(496219..498372) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /db_xref="GeneID:6156428" CDS complement(496219..498372) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /EC_number="3.6.3.12" /codon_start=1 /transl_table=11 /product="putative cation transport ATPase component" /protein_id="YP_001709236.1" /db_xref="GI:170780904" /db_xref="GeneID:6156428" /translation="MTVLTTPEADTAAAPAATRARAIDARQLAEALPGAFRKLDPRLM WKNPVMLIVEVGAAFTTVLAIAEPFTGGAGSSGGSAVPATFTAGIALWLWLTVVFANL AESVAEGRGKAQADSLRKTRTSTMAHVVASDDQAGDPGAERAELREVSSADLTLGDTV VVVAGESIPGDGDVVWGIASIDESAITGESAPVIRESGGDRSAVTGGTRVLSDRIVVR ITSKPGETFVDRMIGLVEGASRQRTPNEIALNILLASLTIVFVIVALTLNPIASYSAA TVSVPVLIALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAAGDVTTLLL DKTGTITYGNRRASELIPVGGVTGEELARAAAMSSLADPTPEGSSVVDLAVAQGLDTV TLPRGVDVPFTAQTRMSGVDLPDGRIVRKGASSAVFAWIEEGGRALPQLVRDELTRTV EAVSNGGGTPLVVATKDADGSGRVLGVVHLKDVVKDGLKERFAELRAMGIRTVMITGD NPLTARAIAAEAGVDDHLAEATPEDKLALIRKEQEGGRLVAMTGDGTNDAPALAQADV GVAMNTGTSAAKEAGNMVDLDSDPTKLIDIVRIGKQLLITRGALTTFSIANDIAKYFA IIPAMFTGVFPQLAVLNVMQLHSPASAILSAIVFNALIIVALIPLALRGVKYRPLSAS KVLSRNLLVYGVGGVIAPFIGIKLVDLVVSLIPGF" misc_feature complement(order(496231..496299,496360..496428, 496456..496509,497461..497529,497572..497631, 498067..498135,498178..498246)) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /note="7 probable transmembrane helices predicted for CMS0461 by TMHMM2.0 at aa 43-65, 80-102, 248-267, 282-304,622-639, 649-671 and 692-714" misc_feature complement(496651..497388) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 1.4e-30" misc_feature complement(497350..497370) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /note="PS00154 E1-E2 ATPases phosphorylation site." misc_feature complement(497398..498099) /gene="kdpB" /locus_tag="CMS_0461" /old_locus_tag="CMS0461" /inference="protein motif:HMMPfam:PF00122" /note="HMMPfam hit to PF00122, E1-E2 ATPase-associated region, score 3.9e-49" gene complement(498369..500045) /locus_tag="CMS_0462" /old_locus_tag="CMS0462" /db_xref="GeneID:6158780" CDS complement(498369..500045) /locus_tag="CMS_0462" /old_locus_tag="CMS0462" /note="catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions" /codon_start=1 /transl_table=11 /product="potassium-transporting ATPase subunit A" /protein_id="YP_001709237.1" /db_xref="GI:170780905" /db_xref="GeneID:6158780" /translation="MDTLAGILQVASVVLVLVLVHRPLGDLMARMYESRHDTRVERGI YRLIGVDPRSEQTWPAYLRAVLAFSLVGVLVVYGMQRLQAFLPYALGLPAVPEGISFN TAVSFVTNTNWQSYSPEATMGYTVQLAGLAVQNFVSAAVGIAVAIALVRGFARTRSGT IGNMWVDLIRGSLRLLLPLSLVTAVVLIAGGVIQNFAGFQDVQTLAGGTQTIPGGPVA SQEAIKMLGTNGGGFFNANSAHPFEDPTAWTSAFQVLLMLVIPFSLPRTFGKMVGDTR QGTAIAAVMATIAVASLTALTLFELQGAGSAPMAAGAAMEGKEQRVGIIGSALFGTVS TLTSTGAVNSMHDSYTALGGMMPMLNMMLGEVAPGGVGSGLYGMLVLAVIAVFVAGLL VGRTPEYLGKKIGPREIKLASLYILVTPILVLVGTALSFAIPAVRDDVEGTSILNSGL HGLSEVVYAFTSAANNNGSAFAGLTASTPWFTTALGVAMLLGRFVPIVLVLALAGSLA AQDRIPTTSGTLPTHRPQFVGLLIGVTVIVTALTYFPVLALGPLAEGLAS" misc_feature complement(498372..500024) /locus_tag="CMS_0462" /old_locus_tag="CMS0462" /inference="protein motif:HMMPfam:PF03814" /note="HMMPfam hit to PF03814, K+ transporting ATPase, A subunit, score 3e-298" misc_feature complement(order(498399..498467,498525..498593, 498738..498806,498867..498935,499149..499208, 499242..499310,499467..499535,499596..499664, 499722..499790,499809..499868,499974..500033)) /locus_tag="CMS_0462" /old_locus_tag="CMS0462" /note="11 probable transmembrane helices predicted for CMS0462 by TMHMM2.0 at aa 5-24, 60-79, 86-108, 128-150,171-193, 246-268, 280-299, 371-393, 414-436, 485-507 and 527-549" gene complement(500146..500325) /locus_tag="CMS_0463" /old_locus_tag="CMS0463" /db_xref="GeneID:6156429" CDS complement(500146..500325) /locus_tag="CMS_0463" /old_locus_tag="CMS0463" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709238.1" /db_xref="GI:170780906" /db_xref="GeneID:6156429" /translation="MRTPAREVSSGASCPRRAPASDRPRHPHRRIPVLDLVYIAGAIV LFALVALVGRGAEKL" misc_feature complement(500167..500235) /locus_tag="CMS_0463" /old_locus_tag="CMS0463" /note="1 probable transmembrane helix predicted for CMS0463 by TMHMM2.0 at aa 31-53" gene complement(500429..500752) /locus_tag="CMS_0464" /old_locus_tag="CMS0464" /db_xref="GeneID:6156430" CDS complement(500429..500752) /locus_tag="CMS_0464" /old_locus_tag="CMS0464" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709239.1" /db_xref="GI:170780907" /db_xref="GeneID:6156430" /translation="MRRGGTLTDSDHRALALWAIACAEHVLPLFEAERPQDPRLRTTL EAARGWVRGEVPMREAHQQSFRANDAGKGLPDPARFPAHFRAAVLADQSARSAICWGV FDDIV" gene complement(500847..502169) /locus_tag="CMS_0465" /old_locus_tag="CMS0465" /db_xref="GeneID:6156431" CDS complement(500847..502169) /locus_tag="CMS_0465" /old_locus_tag="CMS0465" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709240.1" /db_xref="GI:170780908" /db_xref="GeneID:6156431" /translation="MSEALSVYLDGRFAGRYERTTAGRVDFNYDAAYAERRGATPLSM SLPFGARLPPRAVDAYFSGLIPEGADALEQIRRTHGLRTTADAFSVLRHIGRDAPGAV QVLPESEEADDDARAQGDVTPLSVEEFRDLMSDLRSGAATTPAALQGKWSLPGAQRKV ALHRLASGAWGIPQDSTPTTHILKPAIPGFAHHDVNEFLTMRAAASLGLETARTDVLD LGDDLSVVVSHRYDRREGGDRWRRLHQEDLCQALSVMPGRKYQDQGGPGIAQAADLFT EFEYPAEAAAARIRFFDAIVFNIAAWATDAHAKNFSVLLRGNGQQLAPLYDLATYAPY GGGPQAERSAMKVGDEYRLSTIGRRHLQKAARRLRVDADLADARIDHIRDGISAAYAD AATELAEHPALVAPAHAVVDAVHAKAVERGWATESTYVDLASPPDDRR" gene complement(502162..502431) /locus_tag="CMS_0466" /old_locus_tag="CMS0466" /db_xref="GeneID:6156432" CDS complement(502162..502431) /locus_tag="CMS_0466" /old_locus_tag="CMS0466" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709241.1" /db_xref="GI:170780909" /db_xref="GeneID:6156432" /translation="MARTTRTLAAELRHRREELGLTQAGVAGLAGVSREYVVRLESGK VRSELGSVMRVVRALGCELSLTIDPRATDAGSPSPFDQPWEDDDE" misc_feature complement(502234..502398) /locus_tag="CMS_0466" /old_locus_tag="CMS0466" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 2.7e-09" misc_feature complement(502306..502371) /locus_tag="CMS_0466" /old_locus_tag="CMS0466" /note="Predicted helix-turn-helix motif with score 1325.000, SD 3.70 at aa 21-42, sequence LTQAGVAGLAGVSREYVVRLES" gene complement(502509..503309) /locus_tag="CMS_0467" /old_locus_tag="CMS0467" /db_xref="GeneID:6156433" CDS complement(502509..503309) /locus_tag="CMS_0467" /old_locus_tag="CMS0467" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709242.1" /db_xref="GI:170780910" /db_xref="GeneID:6156433" /translation="MDIGGSLGEITLTVALLMLLAALAAGWIDAVVGGGGLLQLPALL LVPGITPVEALATNKLASLFGTTTSAVTWYRRTHPDLRTALPMAAVALVGAYGGASLA ALLPSSVFKPLVVVALIIVAVVTIARPQLGDVAAIRHTGRKHHGIAALLGVVIGFYDG LIGPGTGTFLIIALITALGYDFVLASAKAKIVNVATNLGALAFFIPQGHVLWALALGM GVANMVGGYAGSRMAVARGSRFIRIAFIVVVAVLIVKVGSDVVAEWGA" sig_peptide complement(502509..502670) /locus_tag="CMS_0467" /old_locus_tag="CMS0467" /note="Signal peptide predicted for CMS0467 by SignalP 2.0 HMM (Signal peptide probability 0.846) with cleavage site probability 0.463 between residues 54 and 55" misc_feature complement(order(502524..502592,502650..502718, 502776..502871,502932..502985,502995..503063, 503214..503282)) /locus_tag="CMS_0467" /old_locus_tag="CMS0467" /note="6 probable transmembrane helices predicted for CMS0467 by TMHMM2.0 at aa 10-32, 83-105, 109-126, 147-178,198-220 and 240-262" misc_feature complement(502539..503264) /locus_tag="CMS_0467" /old_locus_tag="CMS0467" /inference="protein motif:HMMPfam:PF01925" /note="HMMPfam hit to PF01925, Protein of unknown function DUF81, score 2.8e-32" gene complement(503317..503943) /locus_tag="CMS_0468" /old_locus_tag="CMS0468" /db_xref="GeneID:6156434" CDS complement(503317..503943) /locus_tag="CMS_0468" /old_locus_tag="CMS0468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709243.1" /db_xref="GI:170780911" /db_xref="GeneID:6156434" /translation="MLARRAIAAGHEVLISGSGDPSRIALIVDVLAPGAVATTSADAA ARADVVILALPLGKLPSVPVAELRGKLVVDAMNYWWEVDGHRDDLANPASSTSELVQD FLPDATIVKAFNHMGYHDLDEGPRPAGAPGRKGIAVAGDDDWARATVAALVDAFGFDP VDIGPLSAGRVLEPGRSLFGVNVDADEIRRLVALETADVTRDASRAAE" gene 504445..505146 /locus_tag="CMS_0469" /old_locus_tag="CMS0469" /db_xref="GeneID:6156435" CDS 504445..505146 /locus_tag="CMS_0469" /old_locus_tag="CMS0469" /codon_start=1 /transl_table=11 /product="putative regulatory protein" /protein_id="YP_001709244.1" /db_xref="GI:170780912" /db_xref="GeneID:6156435" /translation="MPRRAAVADAAEALERAGNRGSDLSGPLASVFGVSGAAVSTLGD PLGSETVSASDERAARLDEIQLDLGEGPCWEAMTSRVPVLEPDMRTSAGTSWPLARHA MHEAGLGAVFAFPLELAGLSLGAVDLYSRTARDISDREVTDATALSRIVARQVLRRAL LTSEAWREETDAWKGRYSRREVHQATGMVVAQMGISPTDALLVLRGHAFATGRPVRDV AEDVVGRILDFTPER" misc_feature 504946..505113 /locus_tag="CMS_0469" /old_locus_tag="CMS0469" /inference="protein motif:HMMPfam:PF03861" /note="HMMPfam hit to PF03861, ANTAR, score 0.00032" gene 505197..505925 /locus_tag="CMS_0470" /old_locus_tag="CMS0470" /db_xref="GeneID:6156436" CDS 505197..505925 /locus_tag="CMS_0470" /old_locus_tag="CMS0470" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709245.1" /db_xref="GI:170780913" /db_xref="GeneID:6156436" /translation="MPETREELLVHTFVSLADSLVGDFDVLDLLQTLVDQTTLLFDAS AAGIIIGPDAQHLEVVASTSEKSRLVGLMQLEVGEGPCVEAVTTGRVVSVADVREIAH RWPAFAEQAAGAGYVSVHAIPLRLRGRVIGSLNLFRDHEGVLNEADATAAQALADVAT ISVLQERTIRDSGVVHAQLRHALDSRVVIEQAKGVIAHTHGVDMDEAFRLIRREARDT STAMPVVAAGIVEGRVRIRAAARP" misc_feature 505269..505685 /locus_tag="CMS_0470" /old_locus_tag="CMS0470" /inference="protein motif:HMMPfam:PF01590" /note="HMMPfam hit to PF01590, GAF, score 4.3e-10" misc_feature 505719..505886 /locus_tag="CMS_0470" /old_locus_tag="CMS0470" /inference="protein motif:HMMPfam:PF03861" /note="HMMPfam hit to PF03861, ANTAR, score 8.5e-11" gene complement(505957..506598) /locus_tag="CMS_0471" /old_locus_tag="CMS0471" /db_xref="GeneID:6156437" CDS complement(505957..506598) /locus_tag="CMS_0471" /old_locus_tag="CMS0471" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709246.1" /db_xref="GI:170780914" /db_xref="GeneID:6156437" /translation="MPENRDPALPWLLFDIGGVLITRPDDIGAISRALDPDAPGGEDA EARVRDAFDAHREPYDRGGSAREFWEAVARDLGLPAPGEDDLAELVAIEQRRWASPGD DTLAALDRAVAAGYRLAILSNAPHELADVLEDPAGWGARFDVVLVSARIGTAKPDADV WPLAAERLASPADGILFVDDKPANVDAAREASFHAHVWEGLSTLDRILAGTLA" misc_feature complement(505996..506574) /locus_tag="CMS_0471" /old_locus_tag="CMS0471" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 8.3e-06" gene 506847..507347 /locus_tag="CMS_0472" /old_locus_tag="CMS0472" /db_xref="GeneID:6156438" CDS 506847..507347 /locus_tag="CMS_0472" /old_locus_tag="CMS0472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709247.1" /db_xref="GI:170780915" /db_xref="GeneID:6156438" /translation="MATTTDLRVGDVSLVALAAERGTPCTTTAAAVDRCSSGRASRTV RASAVVLRILAVAPATADAPRALLVDADVAGFACAWEEARLIGRASTAAARPAEVGGR AVRLPADLAAGDLLAVPVPAEVEVRGIRVVDASTPVTLPHTARIASAPVRVEAPIRVR ALAPAR" gene 507405..507491 /locus_tag="CMS_r039" /old_locus_tag="CMSr039" /db_xref="GeneID:6156439" tRNA 507405..507491 /locus_tag="CMS_r039" /old_locus_tag="CMSr039" /product="tRNA-Ser" /note="codon recognized: UCG; tRNA Ser anticodon CGA, Cove score 57.98" /anticodon=(pos:507439..507441,aa:Ser) /db_xref="GeneID:6156439" gene complement(507603..508223) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /db_xref="GeneID:6159061" CDS complement(507603..508223) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /codon_start=1 /transl_table=11 /product="putative two component response regulator" /protein_id="YP_001709248.1" /db_xref="GI:170780916" /db_xref="GeneID:6159061" /translation="MIRIVIADDHPVVRAGLHAVLDAAADIDVIGEAATPAEAVALAA SEDPDLVLMDLQFGQERTGADATRQIRQAEAAPYVLILTNYDSDGDILSAVEAGASGY LLKDAPPAELLAAVRAAAAGESALAPAVASRLLARMRAPRVSLSSREIEVLRLVADGA SNTDVAARLHITDATVKSHLVHVFSKLGVSSRTAAVAAAREMGVLR" misc_feature complement(507627..507800) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 3.5e-19" misc_feature complement(507666..507749) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature complement(507681..507746) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /note="Predicted helix-turn-helix motif with score 1038.000, SD 2.72 at aa 160-181, sequence ASNTDVAARLHITDATVKSHLV" misc_feature complement(507852..508220) /locus_tag="CMS_0473" /old_locus_tag="CMS0473" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.9e-29" gene complement(508220..509398) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /db_xref="GeneID:6156440" CDS complement(508220..509398) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /codon_start=1 /transl_table=11 /product="putative two component sensor kinase" /protein_id="YP_001709249.1" /db_xref="GI:170780917" /db_xref="GeneID:6156440" /translation="MAHSTLSPVFVGLRTGLHVLVAALLALVVVRVLVADGPRTGIAL ALAAAFAVLYLLGARVRLVRVSRRAAVGAVWITALTAAWIALLVLVPDAAYLVFPLFF LYLHALPRAVGPVAVVVATLVAVVALGLHGGFTIGGVIGPLVGAGVALLIGLGYRALA RESAEREALLAELIATRDLLAATEREQGVLTERARLAREIHDTVAQGLSSIQMLLHAA EAADGDRPGLDHIRLARATAADGLADTRRFIRELAPPSLDAGLGAALGRLSAQWRREG LRIDVAVPPLESPLPMDVQTALLRIAQGAVANVAQHADASVVEIGLTVTAAHATLTVR DDGAGFDPARAAADAGASDSFGLRAMAQRVEQLGGTLDVDSAPGRGTIITAVLGVGPS" sig_peptide complement(508220..508321) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /note="Signal peptide predicted for CMS0474 by SignalP 2.0 HMM (Signal peptide probability 0.636) with cleavage site probability 0.246 between residues 34 and 35" misc_feature complement(508229..508522) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2e-16" misc_feature complement(508628..508825) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase, score 3.6e-18" misc_feature complement(order(508919..508987,509000..509068, 509126..509194,509213..509281,509294..509362)) /locus_tag="CMS_0474" /old_locus_tag="CMS0474" /note="5 probable transmembrane helices predicted for CMS0474 by TMHMM2.0 at aa 13-35, 40-62, 69-91, 111-133 and 138-160" gene 509446..510669 /locus_tag="CMS_0475" /old_locus_tag="CMS0475" /db_xref="GeneID:6156441" CDS 509446..510669 /locus_tag="CMS_0475" /old_locus_tag="CMS0475" /codon_start=1 /transl_table=11 /product="putative ABC transport integral membrane protein" /protein_id="YP_001709250.1" /db_xref="GI:170780918" /db_xref="GeneID:6156441" /translation="MGRREQTSPRWMRGARRRVWSRRRGRTPAPEGSNVFVAWRDLRF ARGRFVLIGAVVALITLLVGFLAGLTGGLAAQDVSAVLGLPGDRLVLAQPDSGQPSFA QSSLDDATVAAWRGTSGVAAVTPIGIAQGRATGAGAAGGAGAAGGADADADAVAVALF GIPYGAPASTVTDLAPTADDEVGLSSEAARALHADVGDPVTIAGTAYRVASVGGDASY SHTPVVALTPEAWSAADQRLGGDGDATVLAVSGSPDWSAAASATRTSASPALASLGAL ETFKSEIGSLALMIAMLFGVSALVVGAFFTVWTMQRAGDIAVLKALGASDASLIRDAL GQALVVLVLAIGAGIAVVAVLGSLAGGTLPFLLSPLTTLLPAAAMAVLGLAGAAVALR TVTHADPLTALGSNR" misc_feature order(509590..509658,510301..510369,510454..510522, 510550..510618) /locus_tag="CMS_0475" /old_locus_tag="CMS0475" /note="4 probable transmembrane helices predicted for CMS0475 by TMHMM2.0 at aa 49-71, 286-308, 337-359 and 369-391" misc_feature 510010..510642 /locus_tag="CMS_0475" /old_locus_tag="CMS0475" /inference="protein motif:HMMPfam:PF02687" /note="HMMPfam hit to PF02687, Protein of unknown function DUF214, score 2.3e-17" gene 510666..511394 /locus_tag="CMS_0476" /old_locus_tag="CMS0476" /db_xref="GeneID:6156442" CDS 510666..511394 /locus_tag="CMS_0476" /old_locus_tag="CMS0476" /codon_start=1 /transl_table=11 /product="putative ABC transport ATP-binding protein" /protein_id="YP_001709251.1" /db_xref="GI:170780919" /db_xref="GeneID:6156442" /translation="MIHLDDVTLTFPDGDSRITAVDRVSLTAPAGVVTGITGPSGSGK SSILAVAATLIRPDSGRVLIGDVDAATLSRKEATALRRDGIGIVFQQSNLVPSLTARE QLLVMAELGGSGGSARRRAVRRRADALLDAVGLIAHAGKRPAQLSGGQRQRVAIARAL VNEPSVLLVDEPTSALDQERGAEIMDLIAQLTHAQGTATLLVTHDLVHRAALDRLVTV VDGRIAGVDEPGDARAAEAVAAAR" misc_feature 510756..511328 /locus_tag="CMS_0476" /old_locus_tag="CMS0476" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.7e-49" misc_feature 510777..510800 /locus_tag="CMS_0476" /old_locus_tag="CMS0476" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 511101..511145 /locus_tag="CMS_0476" /old_locus_tag="CMS0476" /note="PS00211 ABC transporters family signature." misc_feature 511512..515499 /note="low GC" gene complement(511860..512510) /locus_tag="CMS_0477" /old_locus_tag="CMS0477" /db_xref="GeneID:6156443" CDS complement(511860..512510) /locus_tag="CMS_0477" /old_locus_tag="CMS0477" /note="Frameplot suggests that the coding sequence may extend downstream" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709252.1" /db_xref="GI:170780920" /db_xref="GeneID:6156443" /translation="MVRGALWLLQVVGEGGTFTKSQLREAFPGVSQVDRRIRDLSDWG WVVRSSTEDASLQSEDQRFVKSGVAVWDPQERRKAAPRKAITSKERRAVLARDGYMCT LCGIAGAEPYRDDPVMTAVLSVSRRKVRTIEGSETEMLVTECNRCRSGQDNVPIDMGV AIAATSGLSAGARRRLLRWMERGRRGMTEFDRAWAAYLRTPVDLRPELAEWLRGQQ" gene complement(512610..513452) /locus_tag="CMS_0478" /old_locus_tag="CMS0478" /db_xref="GeneID:6156444" CDS complement(512610..513452) /locus_tag="CMS_0478" /old_locus_tag="CMS0478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709253.1" /db_xref="GI:170780921" /db_xref="GeneID:6156444" /translation="MRLPPEPVLLAARRWLEIVPVSGGIPRAQSLLTTHRKYSDLSPT QYAIAFAWLRDMGLLGLPGSGAPPASRILRAIFENAAPTWFQDADQLVRSPDDLPSDI VSAGQALGVGRGEVYEQLVSSWGKVDTAVREQIGAAGEVALVQMLRDGTDGRVDHVST WSDGFGYDIAFTQDPVAAHLEVKSTTRAGRFTAYLSRHECEVMLRDRHWVLVAVRLNS SFEVVGVGTVPRDWITANVPHDSTSSVSWASCKIEVPSAVIEDRVLQLGADAAGALPP WSGA" gene complement(513436..514029) /locus_tag="CMS_0479" /old_locus_tag="CMS0479" /db_xref="GeneID:6156445" CDS complement(513436..514029) /locus_tag="CMS_0479" /old_locus_tag="CMS0479" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709254.1" /db_xref="GI:170780922" /db_xref="GeneID:6156445" /translation="MMQDLPAYEMSPKYQEVLAIVSENAARGRKTLVWSTFIRSINTL ERVLGRFGPAVVHGGTPDRDEQIRRFKHDDDCMVLLSNPATLGEGISLHHECHDAVYV DRDFAAGRFLQSLDRIHRLGLPPGTSTRVTVLASERTVDEVVAARLGAKLAFMGGILD DPAVQQLADLDEEPPIGGGLDHGDLQALMGHLRAPST" misc_feature complement(513664..513897) /locus_tag="CMS_0479" /old_locus_tag="CMS0479" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 0.0078" gene complement(514026..514490) /locus_tag="CMS_0480" /old_locus_tag="CMS0480" /pseudo /db_xref="GeneID:6156446" misc_feature complement(514089..514157) /locus_tag="CMS_0480" /old_locus_tag="CMS0480" /note="1 probable transmembrane helix predicted for CMS0480 by TMHMM2.0 at aa 142-164" /pseudo gene complement(514492..515454) /locus_tag="CMS_0481" /old_locus_tag="CMS0481" /db_xref="GeneID:6156447" CDS complement(514492..515454) /locus_tag="CMS_0481" /old_locus_tag="CMS0481" /note="P/R/C Part of NRPS disruption. The apparent cargo may have arrived after the recombination" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709255.1" /db_xref="GI:170780923" /db_xref="GeneID:6156447" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(514504..515046) /locus_tag="CMS_0481" /old_locus_tag="CMS0481" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(515539..517817) /locus_tag="CMS_0482" /old_locus_tag="CMS0482" /pseudo /db_xref="GeneID:6156448" misc_feature complement(515976..516167) /locus_tag="CMS_0482" /old_locus_tag="CMS0482" /inference="protein motif:HMMPfam:PF00550" /note="HMMPfam hit to PF00550, Phosphopantetheine-binding,score 1.1e-07" /pseudo misc_feature complement(516417..517637) /locus_tag="CMS_0482" /old_locus_tag="CMS0482" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 6.5e-110" /pseudo misc_feature complement(517200..517235) /locus_tag="CMS_0482" /old_locus_tag="CMS0482" /note="PS00455 Putative AMP-binding domain signature." /pseudo gene complement(517922..518290) /locus_tag="CMS_0483" /old_locus_tag="CMS0483" /db_xref="GeneID:6156449" CDS complement(517922..518290) /locus_tag="CMS_0483" /old_locus_tag="CMS0483" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001709256.1" /db_xref="GI:170780924" /db_xref="GeneID:6156449" /translation="MDPAPGYRIDPGSAAPPFEQLRAEIARRAVEGELPVGARLPTVR ALAEQAGVAVNTVARAYKELEADGVIETRGRAGSYVAAQDDVPQALRAAAVAYAQLAG RLGVADGEARRLVDEALAAG" misc_feature complement(518051..518242) /locus_tag="CMS_0483" /old_locus_tag="CMS0483" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 1.7e-13" misc_feature complement(518105..518170) /locus_tag="CMS_0483" /old_locus_tag="CMS0483" /note="Predicted helix-turn-helix motif with score 1164.000, SD 3.15 at aa 41-62, sequence PTVRALAEQAGVAVNTVARAYK" gene 518414..518785 /locus_tag="CMS_0484" /old_locus_tag="CMS0484" /db_xref="GeneID:6156450" CDS 518414..518785 /locus_tag="CMS_0484" /old_locus_tag="CMS0484" /codon_start=1 /transl_table=11 /product="putative integral emmbrane protein" /protein_id="YP_001709257.1" /db_xref="GI:170780925" /db_xref="GeneID:6156450" /translation="MSELELITMWSRARKQMITSQLAPVFLLTSTVVLLRTGLADADL GTRLAAALILLATGVLGSAVQFSVNSQAIAIARDLRDRGAESHAARTVIAAEGLTNLL RYAIPALFVVIYVVILVALFS" misc_feature order(518474..518527,518555..518623,518711..518779) /locus_tag="CMS_0484" /old_locus_tag="CMS0484" /note="3 probable transmembrane helices predicted for CMS0484 by TMHMM2.0 at aa 21-38, 48-70 and 100-122" gene complement(518796..519701) /locus_tag="CMS_0485" /old_locus_tag="CMS0485" /db_xref="GeneID:6156451" CDS complement(518796..519701) /locus_tag="CMS_0485" /old_locus_tag="CMS0485" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709258.1" /db_xref="GI:170780926" /db_xref="GeneID:6156451" /translation="MAIAVFEGAIWAGFLVWVGTGAFSSRNAINRCASERISALNGGR DVSFAQSAVSEVRHSFSTLFRPLAGLRRADASWARDVQKHARGALTVEDIVSLEAMLT SVSVGVGISREAVGDTHPDRTSPDRESPARISAATSGSRSQLLMIEERARQEINGAQS LGDVRRTLAAARWGLLRVGVSSLAEREHRARWQRLGATCADYIGRGAAFNLVVTMVIA RRVAELETILSITSLIGGAVGAIAFAAMLLERSRRTITADSSAFLSRLTRRPLLMALA APTWTACFIAGVYALKQWLPIVLPR" misc_feature complement(order(518829..518897,518958..519026)) /locus_tag="CMS_0485" /old_locus_tag="CMS0485" /note="2 probable transmembrane helices predicted for CMS0485 by TMHMM2.0 at aa 226-248 and 269-291" gene complement(519958..520395) /locus_tag="CMS_0486" /old_locus_tag="CMS0486" /db_xref="GeneID:6156452" CDS complement(519958..520395) /locus_tag="CMS_0486" /old_locus_tag="CMS0486" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_001709259.1" /db_xref="GI:170780927" /db_xref="GeneID:6156452" /translation="MDNLDHRIIDLLRQNGRAGYGDIGGTVGLSASAVKRRVDRLVAD GVIRGFTIQVDPAVDGLSTEAYVELFCRGTVAPDELRRILQGVPEVVDAGTVTGDADA IVRIRSRDIPSLEDALEKVRLAPNVDHTRSAIVLSRLVNRTLE" misc_feature complement(520021..520269) /locus_tag="CMS_0486" /old_locus_tag="CMS0486" /inference="protein motif:HMMPfam:PF01037" /note="HMMPfam hit to PF01037, Bacterial regulatory proteins, AsnC/Lrp, score 1.9e-05" gene 520474..521421 /locus_tag="CMS_0487" /old_locus_tag="CMS0487" /db_xref="GeneID:6156453" CDS 520474..521421 /locus_tag="CMS_0487" /old_locus_tag="CMS0487" /codon_start=1 /transl_table=11 /product="putative amidinotransferase" /protein_id="YP_001709260.1" /db_xref="GI:170780928" /db_xref="GeneID:6156453" /translation="MIRVPGCREGVPSGLWDIVRLHDRVLGRAARSRSTMPSTLSQPA DTATGRAAVAKRVLMCRPDHFDVVYKINPWMDPAVPTDTSLAVRQWQTLYDTYVGLGF RVDLIDGIAGLPDMVYAANGGFTLDGIAYGAAFQHPERQPEGPAYMDWFREAGFDVRV PEQVNEGEGDILLVGDTILAGTGFRSDSTSHAEVARIFDREVVTLRLVNPSFYHLDTA IAVLDDTNIAYLPSAFDADSLDEIERRYPDAVEVSEQDASILGLNSYSDGRNVVIAEK AVGFEASLRERGYTPIGVDLSELLLGGGGVKCCTLELRQ" misc_feature 520618..521418 /locus_tag="CMS_0487" /old_locus_tag="CMS0487" /inference="protein motif:HMMPfam:PF02274" /note="HMMPfam hit to PF02274, Amidinotransferase, score 1.5e-61" gene 521418..522707 /locus_tag="CMS_0488" /old_locus_tag="CMS0488" /db_xref="GeneID:6156454" CDS 521418..522707 /locus_tag="CMS_0488" /old_locus_tag="CMS0488" /codon_start=1 /transl_table=11 /product="ornithine aminotransferase" /protein_id="YP_001709261.1" /db_xref="GI:170780929" /db_xref="GeneID:6156454" /translation="MTGETATDETTGDHAMTDTIDRPAASEAGARAIRAEEEHAAHNY HPLPVVVASGQGAWVTDLDGRRLLDCLAAYSAVNFGHSHPELVRVATEQLGRITLTSR AFHNDKLGPFVTALAELAGKDMVLPMNTGAEAVESGIKVARAWGYRVKGVAAGRAKII VMAGNFHGRTTTIVSFSDDEEARADFGPFTPGFVTVPYGDAAALEAAIDADTVAVLVE PIQGEAGIVVPPAGYLADVRRICTRERVLMIADEIQSGLGRTGATFECDNAGVVPDLY LLGKALGGGIVPVSAVVGDADVLGVIQPGQHGSTFGGNPLAAAVGHAVVDMLASGEPQ ERARRLGAVLHARLADLVGHGVLEVRGRGLWAGIDIDPALATGRAVCERLAERGVLAK DTHGSTIRLAPPIVVEEEDLVWAVGQLAEVLAELGAR" misc_feature 521529..522698 /locus_tag="CMS_0488" /old_locus_tag="CMS0488" /inference="protein motif:HMMPfam:PF00202" /note="HMMPfam hit to PF00202, Aminotransferase class-III,score 1.6e-141" misc_feature 522159..522272 /locus_tag="CMS_0488" /old_locus_tag="CMS0488" /note="PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site." gene 523490..523948 /locus_tag="CMS_0489" /old_locus_tag="CMS0489" /db_xref="GeneID:6156455" CDS 523490..523948 /locus_tag="CMS_0489" /old_locus_tag="CMS0489" /note="Similar to downstream CDS" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709262.1" /db_xref="GI:170780930" /db_xref="GeneID:6156455" /translation="MKATAPLATAPLATRDRRTRALDACLCIASSLLVAVGLPAERAS AATPTPYSERAPHTGRWNGIDIYVGRNDVHGLILQSYGAGTVDCVRIMPGWVAVPFPA AEKVQDGADATVSALDTCERGSQLPDTTRDVFAGEHWHLATTEFRRTYRP" sig_peptide 523490..523624 /locus_tag="CMS_0489" /old_locus_tag="CMS0489" /note="Signal peptide predicted for CMS0489 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.994 between residues 45 and 46" gene 524042..524458 /locus_tag="CMS_0490" /old_locus_tag="CMS0490" /db_xref="GeneID:6156456" CDS 524042..524458 /locus_tag="CMS_0490" /old_locus_tag="CMS0490" /note="Similar to upstream CDS" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709263.1" /db_xref="GI:170780931" /db_xref="GeneID:6156456" /translation="MPVPCPRPLSPDPRRHRVVVVGGAALLTVLSAAVSQPAQARPEA GPHAKPWDGFDLRVTDTVTGKHGVIVQTFAHSDEYCIELSHGWNAIPLQHRSYRGSGA KLILVNHCGKRDLIGSRVWFASPNEIWTLDSGSVHR" sig_peptide 524042..524161 /locus_tag="CMS_0490" /old_locus_tag="CMS0490" /note="Signal peptide predicted for CMS0490 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.986 between residues 40 and 41" gene complement(524550..525434) /locus_tag="CMS_0491" /old_locus_tag="CMS0491" /db_xref="GeneID:6156457" CDS complement(524550..525434) /locus_tag="CMS_0491" /old_locus_tag="CMS0491" /codon_start=1 /transl_table=11 /product="putative epimerase/dehydratase" /protein_id="YP_001709264.1" /db_xref="GI:170780932" /db_xref="GeneID:6156457" /translation="MKVLVTGSRGKVGRAAVEALVAAGHDVTGVDLVRPVFDAGVVVP GRYVMADLTDAGSAFALVAGMDAVVHVAAIPQPTGNPAHVVLQTNLMSTFNMIEAAVR FGVPRFVNISSESIVGNFFPERPFLPDYAPVDEEHPLRPQDPYALSKAFGEQLMDAAV RRSDIRVISLRPSTVHNEDNYTSNLGKQVRDASVLTANLWSYIDADDLADAIVLSVAS DLPSHEVFYIAAADNAGGHDFAAELKRHYGDAIELRAIERVDSSGISTAKARRLLGWE PTRSWRDHLDADGNALPR" gene complement(525431..525862) /locus_tag="CMS_0492" /old_locus_tag="CMS0492" /db_xref="GeneID:6156458" CDS complement(525431..525862) /locus_tag="CMS_0492" /old_locus_tag="CMS0492" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709265.1" /db_xref="GI:170780933" /db_xref="GeneID:6156458" /translation="MSHDTTPASPGAGADADAAVAAPLDPELQSTTWTLVLALSAEQV SGDGTRSARLAEAQAAFERLLPADHVVNRWTREVGRMMTEEARLWTRWELFTPTVATP LKLWSEGYVDETWFAERLEDDPFVPVVMKAPADAPQDGAAS" gene complement(525859..526317) /locus_tag="CMS_0493" /old_locus_tag="CMS0493" /db_xref="GeneID:6156459" CDS complement(525859..526317) /locus_tag="CMS_0493" /old_locus_tag="CMS0493" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709266.1" /db_xref="GI:170780934" /db_xref="GeneID:6156459" /translation="MTVIEVPGGRAQARGAGIVTAVVGFAGTSAVVLTGLTAVGASPS QAASGLLALCVTQGLGTVLLAHRFRRPITLSWSTPGAALLIGSGAVEGGWAAAVGAFL VCVVAASGITVGGLGAAFCALVAGVLAHLALRTRASPRDRLDRHEERDAA" sig_peptide complement(525859..525996) /locus_tag="CMS_0493" /old_locus_tag="CMS0493" /note="Signal peptide predicted for CMS0493 by SignalP 2.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.809 between residues 46 and 47" misc_feature complement(order(525919..525987,526015..526083, 526120..526188,526201..526269)) /locus_tag="CMS_0493" /old_locus_tag="CMS0493" /note="4 probable transmembrane helices predicted for CMS0493 by TMHMM2.0 at aa 17-39, 44-66, 79-101 and 111-133" gene 526545..527819 /locus_tag="CMS_0494" /old_locus_tag="CMS0494" /db_xref="GeneID:6156460" CDS 526545..527819 /locus_tag="CMS_0494" /old_locus_tag="CMS0494" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709267.1" /db_xref="GI:170780935" /db_xref="GeneID:6156460" /translation="MAAVLAASGLLLGLGVPSAQAAEEYPTWSEVQAARSSEQATADQ VGRITSLISGLSAEVEAATALALQRADEHAAAVDALDQATGELEALESKAERAQADAD EAKRQVGQLVARLARSGGSDDVSLRLFTSGGDDADALLSRMGTATKLADRQDTAFTAA VTSARTAESLGKQASVAKEALAALAADAEAKLQEASAAQARADQALAEQEARSSELQA QLTTLRDSRISVEEGFAIGERKRQEEAAAEARRQAEARAAAAAAAAAAAANAGARPPA NAPRPPSSGGQPSSSGWTMPIRSYGSYQSYGMRLHPILGYWRLHAGDDFGAGCGTPIY ATAAGTVQFAGGSSGFGNAITLNHGGGVTSVYGHMYSYGVMVRTGQTVQAGQQIGAVG SAGLSTGCHLHFEIRQGGVATSPMPFLRNRGV" sig_peptide 526545..526607 /locus_tag="CMS_0494" /old_locus_tag="CMS0494" /note="Signal peptide predicted for CMS0494 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.975 between residues 21 and 22" misc_feature 527496..527789 /locus_tag="CMS_0494" /old_locus_tag="CMS0494" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 1.7e-36" gene 527856..528596 /locus_tag="CMS_0495" /old_locus_tag="CMS0495" /db_xref="GeneID:6156461" CDS 527856..528596 /locus_tag="CMS_0495" /old_locus_tag="CMS0495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709268.1" /db_xref="GI:170780936" /db_xref="GeneID:6156461" /translation="MRRMTGRIRRFAQAVARPAIFAQYVALRTGLQGTVFPRDAASGV VPGDDPHRVLVIGEATAVGMGVLSHELGMAGHFSRQLARRTGRGVEWTTRPFSDLTIH TAAGTVRDRALLEGVDVVLLMVGVGDSIRLTPQRAWRRLLCAAITDLAEGLPEGARVL IPEVPPLNESVGIPAAWRAVAARHARLLNRVTAEIVASRAAVVAVPFPGESVMDLGDP DAAQASRVYASWSRAFVQRMLGPSRTAE" gene 528763..529218 /locus_tag="CMS_0496" /old_locus_tag="CMS0496" /db_xref="GeneID:6156462" CDS 528763..529218 /locus_tag="CMS_0496" /old_locus_tag="CMS0496" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709269.1" /db_xref="GI:170780937" /db_xref="GeneID:6156462" /translation="MPRVIETVDVNVPVSTAYNQWTQFESFPNFLSYVESITQVTDTL TEWKVKIGGIERTFEANITEQHPDERVAWNSTGGDEDHAGVVTFHKLSDTETRVTVQL DWEAKGLVEKVGAAIGVDDHVIKADLKNFKEFIEKRGTEDGAWRGDVQA" misc_feature 528790..529161 /locus_tag="CMS_0496" /old_locus_tag="CMS0496" /inference="protein motif:HMMPfam:PF03364" /note="HMMPfam hit to PF03364, Streptomyces cyclase/dehydrase, score 3.8e-25" gene 529221..529457 /locus_tag="CMS_0497" /old_locus_tag="CMS0497" /db_xref="GeneID:6156463" CDS 529221..529457 /locus_tag="CMS_0497" /old_locus_tag="CMS0497" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709270.1" /db_xref="GI:170780938" /db_xref="GeneID:6156463" /translation="MDTSEIVWNQEARDKILTDSDRVLQEAVLTAAKELEGQDWETVY QRLFEQLKGRFIDFEPGPDLRKYAEAVSRGEIQG" gene 529746..530072 /locus_tag="CMS_0498" /old_locus_tag="CMS0498" /db_xref="GeneID:6156464" CDS 529746..530072 /locus_tag="CMS_0498" /old_locus_tag="CMS0498" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709271.1" /db_xref="GI:170780939" /db_xref="GeneID:6156464" /translation="MAASALTDTNTGSEHIFFAFGYGVYAVLAPSEQTHILKTVDDHA DDAVAAVCAKRGDLCAFGTGAVASLVATMTSPQGTHAVPCLATEDYRLVLKGPGASKC VAHTES" gene 530286..530636 /locus_tag="CMS_0499" /old_locus_tag="CMS0499" /db_xref="GeneID:6156465" CDS 530286..530636 /locus_tag="CMS_0499" /old_locus_tag="CMS0499" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709272.1" /db_xref="GI:170780940" /db_xref="GeneID:6156465" /translation="MPRPRRRTGPRRAPAARVGDAPPAARAAAAASAHRPGLAARPVG RRAAGRILDQVVFGIVGGVSAASSIIPLQGMAQQRTDDVVLARRTGIVASFGGGSPDA QVATRPDTPGEPTA" misc_feature 530448..530516 /locus_tag="CMS_0499" /old_locus_tag="CMS0499" /note="1 probable transmembrane helix predicted for CMS0499 by TMHMM2.0 at aa 55-77" gene 530689..531864 /locus_tag="CMS_0500" /old_locus_tag="CMS0500" /db_xref="GeneID:6156466" CDS 530689..531864 /locus_tag="CMS_0500" /old_locus_tag="CMS0500" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709273.1" /db_xref="GI:170780941" /db_xref="GeneID:6156466" /translation="MPQRGPLGPLAVPDLPDAIRRGVRRPPARRRTHHVKLFSPVALG ALELPNRVAMAPLTRMRSDEHGVPGDLVVEYYRQRASTGLIVSEGVFTSERSKAYPGQ PGIVTDEQIAGWRRVTDAVHEAGGRIVMQLMHGGRVSHEEITGGLPLLAPSAIAIQGE VHTPTGKAPYPVPSEPETDEVPLIVDELTVAARNAVDAGFDGVEIHSANGYLLHEFLS PVSNVRTDAYGGSPENRAKLGIDVAHAVSREIGAERVGIRISPSHNIQDVLEEDPAET RATYEALLSGIAPLGLAYVSILHAEPAGELVQGLRKTFGGPLMINSGFGVQTERDEAI QLVEEGTADVVAVGRMVIANPDLVERWESGASTNEPNPATFYGPGAEGYTDYPALAS" misc_feature 530794..531792 /locus_tag="CMS_0500" /old_locus_tag="CMS0500" /inference="protein motif:HMMPfam:PF00724" /note="HMMPfam hit to PF00724, NADH:flavin oxidoreductase/NADH oxidase, score 8.4e-86" gene complement(531911..532633) /locus_tag="CMS_0501" /old_locus_tag="CMS0501" /db_xref="GeneID:6156467" CDS complement(531911..532633) /locus_tag="CMS_0501" /old_locus_tag="CMS0501" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001709274.1" /db_xref="GI:170780942" /db_xref="GeneID:6156467" /translation="MSDGGAHPGGAGLAGVVPAGGPPIRLVIVDDDALVRAGLAMLLG GGHGLEVVGEAADGLAAGAVIARTAPDVVLMDIRMPVCDGITATAREVARRRDLPVIV LTTFDADELVLGALRAGARGFLLKDTPPVDLVQAVRQVAAGRSILSPSVLDTVIGVAA QRDRADRTAERERFMTLTEREQEVALAIARGWSNARIAADLFLGVATVKTHVGHVLDK LGVEGRVQVAVLVHEAGLAPSE" misc_feature complement(531941..532114) /locus_tag="CMS_0501" /old_locus_tag="CMS0501" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2.7e-17" misc_feature complement(531980..532063) /locus_tag="CMS_0501" /old_locus_tag="CMS0501" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature complement(532199..532564) /locus_tag="CMS_0501" /old_locus_tag="CMS0501" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.1e-31" gene complement(532630..533775) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /db_xref="GeneID:6156468" CDS complement(532630..533775) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001709275.1" /db_xref="GI:170780943" /db_xref="GeneID:6156468" /translation="MAVAFVGGMLAFGIAIVAVEETGATGARPAFLLLLDLGAGLVAM GLLPIRRRAPVGVALVIAALGGISSSGVVAALIAVASVSARRRAREIAAVAGTLLVAT LVWEGTGTTTAPIRPDEWPLIAVTILLVVALPVVVGLYVGGRRELLASLRERARLTEE EQALRSAQAADHERTRIAREMHDVLAHRLSLVALHAGALEYRDDLDAAEVRATAGVVR DNARTALTELRGVLGVLRDPSGAPAVAPPQPTLADLPALLDEARALGVEVRAHVHPGT QDDLPRLSTTTSRHAYRAIQECLTNARRHAPGAPVDVSLDGRAGGRLRIVVRNPAPSP AATGSPAATAGHGLAGIAERAHAVDGTLDVSRRDGQHVVEAVLPWTA" sig_peptide complement(532630..532710) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /note="Signal peptide predicted for CMS0502 by SignalP 2.0 HMM (Signal peptide probability 0.921) with cleavage site probability 0.229 between residues 27 and 28" misc_feature complement(532636..532920) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1.7e-09" misc_feature complement(533053..533259) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature complement(order(533350..533418,533446..533505, 533539..533607,533635..533688,533707..533766)) /locus_tag="CMS_0502" /old_locus_tag="CMS0502" /note="5 probable transmembrane helices predicted for CMS0502 by TMHMM2.0 at aa 4-23, 30-47, 57-79, 91-110 and 120-142" gene complement(533947..534303) /locus_tag="CMS_0503" /old_locus_tag="CMS0503" /db_xref="GeneID:6156469" CDS complement(533947..534303) /locus_tag="CMS_0503" /old_locus_tag="CMS0503" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709276.1" /db_xref="GI:170780944" /db_xref="GeneID:6156469" /translation="MSDTLTREYEAGSSHAHPLRRFLRRCRAWIELHPKARWLYRILV GLLGMGIVLVGIVLIPLPGPGWLIVFLGIAVLGTEFPAAHRVNVFLKRQLHRFWDAWR RWRASRAERRAARASR" misc_feature complement(order(534040..534108,534121..534189)) /locus_tag="CMS_0503" /old_locus_tag="CMS0503" /note="2 probable transmembrane helices predicted for CMS0503 by TMHMM2.0 at aa 39-61 and 66-88" gene complement(534395..535012) /locus_tag="CMS_0504" /old_locus_tag="CMS0504" /db_xref="GeneID:6156470" CDS complement(534395..535012) /locus_tag="CMS_0504" /old_locus_tag="CMS0504" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709277.1" /db_xref="GI:170780945" /db_xref="GeneID:6156470" /translation="MTYAVHMAETTGSARSADDKQDDVRHRILLAAREEFAAHGLAGA RVDRIARSGRASKERLYAHFTDKESLFHAVLKLNGVEFFSAVTLDPEDLPGFVGQIFD HSYAHPEHRRMLSWARLDGVTLDVPHSETSPSAKVDAIRRGQESGHIDPSWDPQRLLT MLFALAQAWVQSPYPAMHEDGPRGRAADRAAVVEAARRITAPPAR" misc_feature complement(534791..534931) /locus_tag="CMS_0504" /old_locus_tag="CMS0504" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 1.1e-09" gene 535259..536638 /locus_tag="CMS_0505" /old_locus_tag="CMS0505" /db_xref="GeneID:6156471" CDS 535259..536638 /locus_tag="CMS_0505" /old_locus_tag="CMS0505" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709278.1" /db_xref="GI:170780946" /db_xref="GeneID:6156471" /translation="MVVLDGTIVNIALPAAQRDLGMTDADRTWVVTVYALAFGSLLLL GGRIADYWGRKRSFLLGMVGFAAASALGGFAVSSEMLLIARGLQGVFAALLAPAALAL LSVTFPSGPDRVKAFAVYGTIAGSGAAVGLLLGGVLTEYLSWHWCLLVNVPIAIVAII AGIPLVKESRADGDRSYDVPGALLVTLGLASIVYGFSRAENGWGEPDTIGFLALGVGI MVAFVWWESRARNPLLPLRVVADRTRGGAYLTSVMVGVALLGGLLYLTLHFQIVLGMS PLISGLASLPMAATIMLTAPQVARLLPKVGPRILMTVGPLVAAAGLLWFSRITVDGAY VVQVLPGQILLGIGLAFVFVPMQNVALSGIEPRDAGVAGAALTGTQQIGGSIGTAVFT ALFASAVTASVTDGVANPLQQQVDGYHVVFLAAAIGVACASIISWSMVRVPLERFREG ASSEAVSMH" misc_feature 535259..536446 /locus_tag="CMS_0505" /old_locus_tag="CMS0505" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature order(535340..535393,535427..535486,535514..535573, 535607..535675,535688..535756,535793..535852, 535880..535933,535991..536059,536069..536137, 536174..536242,536270..536338,536399..536467, 536510..536578) /locus_tag="CMS_0505" /old_locus_tag="CMS0505" /note="13 probable transmembrane helices predicted for CMS0505 by TMHMM2.0 at aa 28-45, 57-76, 86-105, 117-139,144-166, 179-198, 208-225, 245-267, 271-293, 306-328,338-360, 381-403 and 418-440" misc_feature 535391..535441 /locus_tag="CMS_0505" /old_locus_tag="CMS0505" /note="PS00216 Sugar transport proteins signature 1." gene complement(536721..537740) /locus_tag="CMS_0506" /old_locus_tag="CMS0506" /pseudo /db_xref="GeneID:6156472" gene complement(537821..538882) /locus_tag="CMS_0508" /old_locus_tag="CMS0508" /db_xref="GeneID:6156473" CDS complement(537821..538882) /locus_tag="CMS_0508" /old_locus_tag="CMS0508" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001709279.1" /db_xref="GI:170780947" /db_xref="GeneID:6156473" /translation="MPAPGSAPTRLGFLTTGAFDPADPATGLEDALRLVELGDALGLD TAWLRPDHLVNAISSPVAMLAAASQRARRIGLGTASIPVRAENPLRLAEDLATVDLLS GGRLRPGLSVGNPTRVAAVDRAIHPVTAEHEEPGRERLLRFRDLLRGGRVPGAEEHDD ERDAEDDDALTSTVQPASPGLADRLGYGAATLRTAAWAGTHGFHLLASDVTERGSRGR GFAQDQRALIDAYRAAHPDPAAAHVTLALVVVPTDGATAEQRARYAADAAARAERAAR ADQGEDAQAASSMVRAPDLVGPSDELAAALLADPAVQAADELAIVLPAGLPAGDRARI LTDVAERLGPALGWSPATA" misc_feature complement(537845..538858) /locus_tag="CMS_0508" /old_locus_tag="CMS0508" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 5.1e-08" gene complement(538927..539892) /locus_tag="CMS_0509" /old_locus_tag="CMS0509" /db_xref="GeneID:6156474" CDS complement(538927..539892) /locus_tag="CMS_0509" /old_locus_tag="CMS0509" /EC_number="1.6.5.5" /codon_start=1 /transl_table=11 /product="putative quinone oxidoreductase" /protein_id="YP_001709280.1" /db_xref="GI:170780948" /db_xref="GeneID:6156474" /translation="MSTRIEVAGPGGPEVMTMTDGPVPDPGPGEVRIRVHAAGVNFID TYRRSGVYPMAHPYMPGSEAAGVIEALGDGVAGVHVGDRVATAEASGTYAQHALIRAE TLLPVPDGVGFETAAALPLQGLTAHYLATSSYPAGPGDRALVHAGAGGVGLLLTQLLV DRGVEVITTVSTEEKAALSRAAGATHVLGYDDVPVRVRELTGGRGVDVVYDGVGRDTF DGSLASLRIRGTLVLFGGASGQVPPFDLQRLNSGGSLSVSRPTLAHFLLDAEERRWRA GELFAGVLDGSLDVRVGATYPLADAARAHEDLEARRTTGSIVLVP" misc_feature complement(538930..539862) /locus_tag="CMS_0509" /old_locus_tag="CMS0509" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 2.8e-75" gene complement(539924..540553) /locus_tag="CMS_0510" /old_locus_tag="CMS0510" /db_xref="GeneID:6156475" CDS complement(539924..540553) /locus_tag="CMS_0510" /old_locus_tag="CMS0510" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709281.1" /db_xref="GI:170780949" /db_xref="GeneID:6156475" /translation="MRSLSGARADRPRNPPGWEPPDLWAPIVGHFTVALVKTPLVLLV TWVASTITGTGHARASEIVSAAVVMTILDVLVTVAVERPFVVRRRLASPGGWDFALLP WLASSAVAYAAGIAMLGVPLGLVLATAMTSVEGLEMLWRRAWRPGDTDAEFQEKWART KELAKETFAPDVAEIRRRLDERAMDGYRRRIAEREAQREQEADNPPRDA" misc_feature complement(order(540176..540244,540302..540370, 540407..540475)) /locus_tag="CMS_0510" /old_locus_tag="CMS0510" /note="3 probable transmembrane helices predicted for CMS0510 by TMHMM2.0 at aa 27-49, 62-84 and 104-126" gene complement(540553..541242) /locus_tag="CMS_0511" /old_locus_tag="CMS0511" /db_xref="GeneID:6156476" CDS complement(540553..541242) /locus_tag="CMS_0511" /old_locus_tag="CMS0511" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709282.1" /db_xref="GI:170780950" /db_xref="GeneID:6156476" /translation="MPIPARPLTMMLVVTAASLVGAMTAALGAAPSAVPVAAPRRAAV ASVSVDSVARMAPATSLAATPAMTDADLDGLVAVLDALPEDIKSADPRTTPDYERRLS RAMEATTSARQSTRADASVLLGLAPRHLLGEAGRIGAPTQVELATDWIACGAAVAGVI AQYGIPVVKVLGWIREAREIWQTAYGIYVAIRDGVFAVQMGEEAAQLLGAILGVDGVA SAYFSSAAVTA" sig_peptide complement(540583..540738) /locus_tag="CMS_0511" /old_locus_tag="CMS0511" /note="Signal peptide predicted for CMS0511 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.343 between residues 52 and 53" gene 541488..542441 /locus_tag="CMS_0512" /old_locus_tag="CMS0512" /db_xref="GeneID:6156477" CDS 541488..542441 /locus_tag="CMS_0512" /old_locus_tag="CMS0512" /EC_number="2.5.1.47" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="YP_001709283.1" /db_xref="GI:170780951" /db_xref="GeneID:6156477" /translation="MKVEPMAGRVYDDITQLVGGTPLVRLNRLTEGLDATVLVKLESH NPASSVKDRIGVAIIDAAEEAGALKPGGTIVEGTSGNTGIALAMVGAARGYKVVLTMP ETMSIERRLVLRAYGAEIVLTPGPEGMRGAVDRAKQIVDETPNSIWAQQFANAANPQK HRETTAEEVWADTDGSVDVFIAGVGTGGTITGVGQVLKERKPGVKIVAVEPLDSPILN GGKPGPHKIQGIGANFVPEILDTGIYDEVVDVSLEDSIRVSRALATDEGILCGISSGS IVWAALEIAKRPESKGKTIVAIVCDFGERYLSTVLFDDLRD" misc_feature 541527..542393 /locus_tag="CMS_0512" /old_locus_tag="CMS0512" /inference="protein motif:HMMPfam:PF00291" /note="HMMPfam hit to PF00291,Pyridoxal-5'-phosphate-dependent enzyme, beta subunit,score 2.3e-122" misc_feature 541605..541661 /locus_tag="CMS_0512" /old_locus_tag="CMS0512" /note="PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site." gene 542444..543028 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /db_xref="GeneID:6156478" CDS 542444..543028 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /EC_number="2.3.1.30" /codon_start=1 /transl_table=11 /product="serine acetyltransferase" /protein_id="YP_001709284.1" /db_xref="GI:170780952" /db_xref="GeneID:6156478" /translation="MGIVARVVEDLRTARAHDPAARGYAEMVLGYPGLHAVWLHRVSH ALWRRRLRLAARLLAQVGRALTGVEIHPGARIGRRLFIDHGMGVVIGATAEVGDDVLM YHGVTLGGKSLVHGKRHPTVGDGVTIGAGAKLLGPITVGAGSVIGANAVVVKDAPAGS VLTGIPAVETGKRAGRAPDAHVDPAFFVDPGIYI" misc_feature 542642..542695 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 18" misc_feature 542702..542755 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 16" misc_feature 542756..542779 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 542816..542869 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 0.47" misc_feature 542870..542923 /gene="cysE" /locus_tag="CMS_0513" /old_locus_tag="CMS0513" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 22" gene 543028..543684 /gene="spoU" /locus_tag="CMS_0514" /old_locus_tag="CMS0514" /db_xref="GeneID:6158650" CDS 543028..543684 /gene="spoU" /locus_tag="CMS_0514" /old_locus_tag="CMS0514" /codon_start=1 /transl_table=11 /product="tRNA/rRNA methyltransferase" /protein_id="YP_001709285.1" /db_xref="GI:170780953" /db_xref="GeneID:6158650" /translation="MSEPEAPEAAPTHEHSTHGVGPWPGGSDAWPDEPHLDPELLERG DTRNVIDRYRYWRMDAIVADLDQHRHPFHVAIENWQHDMNIGSIVRSANAFAADTVHI VGRRRWNKRGAMVTDRYQHVVHHATIADLVEWARGEGLPIIAIDNVDGSVLLETTRLP ERCVLVFGQEGPGLSDEAVAAADMTVAISQFGSTRSINASAAAAVVMHAWVMQHVSFG" misc_feature 543238..543651 /gene="spoU" /locus_tag="CMS_0514" /old_locus_tag="CMS0514" /inference="protein motif:HMMPfam:PF00588" /note="HMMPfam hit to PF00588, tRNA/rRNA methyltransferase (SpoU), score 3.5e-17" gene 543785..544363 /locus_tag="CMS_0515" /old_locus_tag="CMS0515" /db_xref="GeneID:6158995" CDS 543785..544363 /locus_tag="CMS_0515" /old_locus_tag="CMS0515" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709286.1" /db_xref="GI:170780954" /db_xref="GeneID:6158995" /translation="MNKKQTIIRDGIAAIISRLDPDIHRDLEGDRDAYLRLVATVADI DAEAHDTLRDAVHSARAAGASWERIGDTLRISRQAAQQRFGQEARPVGTRGRRLSPVT AFTEMERLEEAGRHGWHSVAFGTLYHDLVQDDQQWEYRRVSVFSSRHALEAEGWERIG SMWIPWAYYARPTGEPPLPEPAEASVGIEPAA" gene complement(544360..545322) /locus_tag="CMS_0516" /old_locus_tag="CMS0516" /db_xref="GeneID:6156479" CDS complement(544360..545322) /locus_tag="CMS_0516" /old_locus_tag="CMS0516" /note="N/R/C" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709287.1" /db_xref="GI:170780955" /db_xref="GeneID:6156479" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature complement(544384..544926) /locus_tag="CMS_0516" /old_locus_tag="CMS0516" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" misc_feature complement(545185..545250) /locus_tag="CMS_0516" /old_locus_tag="CMS0516" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(545512..546471) /gene="coaA" /locus_tag="CMS_0517" /old_locus_tag="CMS0517" /db_xref="GeneID:6156480" CDS complement(545512..546471) /gene="coaA" /locus_tag="CMS_0517" /old_locus_tag="CMS0517" /EC_number="2.7.1.33" /note="catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis" /codon_start=1 /transl_table=11 /product="pantothenate kinase" /protein_id="YP_001709288.1" /db_xref="GI:170780956" /db_xref="GeneID:6156480" /translation="MADTATGSPTSHGHVSPFVEIARADWAALAPATHLPLRETELVQ LRGIGDRLDMREVEDVYLPLSRLLNLYVTGTKKLHRDTSAFLGERAKSTPFIIGVAGS VAVGKSTVARLLREMLARWDDTPRVELVTTDGFLHPNAELERRGLMERKGFPESYDRR ALLRFVTQVKSGVPEVRAPFYSHLAYDIVPGAEVVVRQPDVLIIEGLNVLQPAASGAK LAVSDLFDFSIYVDARTHDIAQWYEERFLSLQRGAFSNPRSYFHRYAELSPAEAVARA RGIWSAINEPNLEQNIRPTRSRATLVLRKDADHSVANVLLRKL" misc_feature complement(545536..546186) /gene="coaA" /locus_tag="CMS_0517" /old_locus_tag="CMS0517" /inference="protein motif:HMMPfam:PF00485" /note="HMMPfam hit to PF00485, Phosphoribulokinase/uridine kinase, score 8.1e-06" misc_feature complement(546148..546171) /gene="coaA" /locus_tag="CMS_0517" /old_locus_tag="CMS0517" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 546560..548410 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /db_xref="GeneID:6158638" CDS 546560..548410 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /EC_number="2.6.1.16" /note="Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source" /codon_start=1 /transl_table=11 /product="glucosamine--fructose-6-phosphate aminotransferase" /protein_id="YP_001709289.1" /db_xref="GI:170780957" /db_xref="GeneID:6158638" /translation="MCGIVGYVGESKSLEVLLGGLRRLEYRGYDSAGVAVLDADGTLG VRKRAGKLDRLLEDLEASPLPNGSTGIGHTRWATHGGPTDRNAHPHLGDDGKLALIHN GIIENFAELKDDLLADGYTFESDTDTEVAARLLGREYGITQDLEQAFRNTVSRLEGAF TLLAVHRDQPGLVVGARRNSPLVIGLGDGENFLGSDVAAFVEFTRRAVAIGQDQMVAI RPDSVTVTDFHGAPVETHEFEIAWDASASEKGGWSSFMAKEISEGPDAVANTLRGRIV DGVVVLPDLDAIGEVDLADISRIVIVACGTAAYSGILGKYAIEKWARVPVEVELAHEF RYRDPVLDATTLVISISQSGETMDTLLAVRYAREAGARVLSICNTQGATIPRESEAVV YTHAGPEVAVASTKAFVAQVAALYLFGLHLARIRGTLSADEIVANTEELLAVPEKLAT VVEQGERISQLAKWMADTRAVLFLGRNVGFPVALEGALKLKELAYIHAEGFAAGELKH GPIALIEPGQPVFVIVPSPVHQLALHKKVISNIEEIRARGARVIAIAEQGDAFVLPHA DEVIPIPLAAPLFEPLLAVTPLQIFAMELAAAKGLDVDQPRNLAKSVTVE" misc_feature 546560..546577 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /note="PS00443 Glutamine amidotransferases class-II active site." misc_feature 546563..546970 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /inference="protein motif:HMMPfam:PF00310" /note="HMMPfam hit to PF00310, Glutamine amidotransferase,class-II, score 1.7e-52" misc_feature 547427..547831 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /inference="protein motif:HMMPfam:PF01380" /note="HMMPfam hit to PF01380, Sugar isomerase (SIS),score 1.4e-32" misc_feature 547943..548365 /gene="glmS" /locus_tag="CMS_0518" /old_locus_tag="CMS0518" /inference="protein motif:HMMPfam:PF01380" /note="HMMPfam hit to PF01380, Sugar isomerase (SIS),score 1.3e-26" gene 548421..548780 /gene="acpS" /locus_tag="CMS_0519" /old_locus_tag="CMS0519" /db_xref="GeneID:6158720" CDS 548421..548780 /gene="acpS" /locus_tag="CMS_0519" /old_locus_tag="CMS0519" /EC_number="2.7.8.7" /note="Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids" /codon_start=1 /transl_table=11 /product="4'-phosphopantetheinyl transferase" /protein_id="YP_001709290.1" /db_xref="GI:170780958" /db_xref="GeneID:6158720" /translation="MIRGIGVDVVDVARFARSAERTPGLVPRLFAPAERSLPTRSLAA RFAAKEALIKALGGPGGISWQDMEVVRDAHGDPSFQVGGAVARVAAARGVTRIHLSMS HDAGLATAFVVTEGEGA" misc_feature 548433..548615 /gene="acpS" /locus_tag="CMS_0519" /old_locus_tag="CMS0519" /inference="protein motif:HMMPfam:PF01648" /note="HMMPfam hit to PF01648, 4'-phosphopantetheinyl transferase, score 1.1e-09" gene 548777..549934 /gene="alr" /locus_tag="CMS_0520" /old_locus_tag="CMS0520" /db_xref="GeneID:6158590" CDS 548777..549934 /gene="alr" /locus_tag="CMS_0520" /old_locus_tag="CMS0520" /EC_number="5.1.1.1" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="YP_001709291.1" /db_xref="GI:170780959" /db_xref="GeneID:6158590" /translation="MTDEATVQVPAALRREARIDLGAISTNVRTLRAAAGAPLVMAVV KADGYGHGAVASARAALAGGADRLGVVDIREALALRAAGIEAPILTWMHAPYADFATA IEAGIDLGLNSLRQVREAAEAARRVGRTAEVHLKVDTGLGRNGVTPAEWPGVVAEVAA LVAEGRIHLGGVFSHLANAGEDEDRAQVRAFHEAVDVVRAAGLEPGIRHLAATAGALR VPEARLDMVRLGIGIYGISPLDGVTSADLGLVPAMTLVGSVVAVKRVPADTGVSYGYT YRTTSATTLALVSLGFADGVPRLASNRAPVAIHGARFRVSGRIAMDQFVVDVGDGVVD GRPVAVGDDAVLFGDPATGAPSVEEWAEATGTIGYEIVARVAGRVTRRHSA" misc_feature 548816..549493 /gene="alr" /locus_tag="CMS_0520" /old_locus_tag="CMS0520" /inference="protein motif:HMMPfam:PF01168" /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal, score 1e-67" misc_feature 548900..548932 /gene="alr" /locus_tag="CMS_0520" /old_locus_tag="CMS0520" /note="PS00395 Alanine racemase pyridoxal-phosphate attachment site." misc_feature 549530..549928 /gene="alr" /locus_tag="CMS_0520" /old_locus_tag="CMS0520" /inference="protein motif:HMMPfam:PF00842" /note="HMMPfam hit to PF00842, Alanine racemase,C-terminal, score 7.8e-42" gene 549931..551667 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /db_xref="GeneID:6158594" CDS 549931..551667 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /EC_number="5.1.1.1" /note="Appears to be a fusion of an alanine racemase with an ATP-binding domain of unknown function" /codon_start=1 /transl_table=11 /product="putative alanine racemase fusion protein" /protein_id="YP_001709292.1" /db_xref="GI:170780960" /db_xref="GeneID:6158594" /translation="MTEPASAPASAGPVAPGRRAVIDLDAIRHNVRTLAALAAPARTM VAVKADAYGHGALQVARAALESGAESLAVLDVASAVELRRAGIDARLLAWLHGVDTDF RVAVEEEIDLGVSALWELKRIAAAGRATGIRARVHLKADTGLSRNGATPELWPDLVRA AVAADSAGELTLHALWSHLADASPEDDDAALARFREAVRVAEELGARPVEKHLAASSA GIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPAMTLEADVVSVKRVEAGHGVSY GLDHRTAGPSTLVLVPLGYADGIPRIAAPRASVLLNGRRFPVAGRIAMDQLVLDVGDL PVEVGDTAVILGPGDRGEPTAEEWAGWAETIGDEIVTRVGPRVDRVHLHERADADDPD GGGAAANGATAEVLSDELVPVATTDDMEELGRAVARELGAGDLVVLSGPLGAGKTTFT RGLGAGLGVRGPVTSPTFVLARTHPSLVDGPPLVHVDAYRLADARELDDLDIDFARSV VVVEWGEGKLDGVAEEWWELAIARPTGAGDADPDAADGGHDGAHDASDPDAAPEEPRT VRIRRLRARPRA" misc_feature 549979..550656 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /inference="protein motif:HMMPfam:PF01168" /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal, score 2.7e-53" misc_feature 550123..550170 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /note="PS00012 Phosphopantetheine attachment site." misc_feature 550693..551076 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /inference="protein motif:HMMPfam:PF00842" /note="HMMPfam hit to PF00842, Alanine racemase,C-terminal, score 7.5e-50" misc_feature 551185..551553 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /inference="protein motif:HMMPfam:PF02367" /note="HMMPfam hit to PF02367, Protein of unknown function UPF0079, score 6e-42" misc_feature 551248..551271 /gene="alr*" /locus_tag="CMS_0521" /old_locus_tag="CMS0521" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 551677..552294 /locus_tag="CMS_0522" /old_locus_tag="CMS0522" /db_xref="GeneID:6158595" CDS 551677..552294 /locus_tag="CMS_0522" /old_locus_tag="CMS0522" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709293.1" /db_xref="GI:170780961" /db_xref="GeneID:6158595" /translation="MLLAIDTSAGTGVAVIDPDGRVLAERQEADTMRHAEVIGTLLDE CLTASGIERCDVRAVVAGMGPGPFTGLRVGIAAARVLATGLDVRVIPVVSHDAVAHDH YAAGGTGSLVVVTDARRRELYWSVYREPVDGGVAERTAGPGLSKPDDVPVADHRIDAA AVSAASLAQVARRMDELDLPFAADEALYLRSPDVTVSAGPKRVTS" misc_feature 551743..551988 /locus_tag="CMS_0522" /old_locus_tag="CMS0522" /inference="protein motif:HMMPfam:PF00814" /note="HMMPfam hit to PF00814, Peptidase M22,glycoprotease, score 1.9e-11" gene 552291..553910 /locus_tag="CMS_0523" /old_locus_tag="CMS0523" /db_xref="GeneID:6156481" CDS 552291..553910 /locus_tag="CMS_0523" /old_locus_tag="CMS0523" /note="C-terminal region similar to known O-sialoglycoprotein endopeptidase UniProt:GCP_PASHA (EMBL:A38108), N-terminal contains PF00583, GCN5-related N-acetyltransferase domain." /codon_start=1 /transl_table=11 /product="putative glycoprotein peptidase-acetyltransferase fusionprotein" /protein_id="YP_001709294.1" /db_xref="GI:170780962" /db_xref="GeneID:6156481" /translation="MSVLFRRAEVADLPALMHLETTTFVSDAWSADAMRGELTARHGW YVVAVDEADGAILGYAGLSCPRGAHAADVQTIAVADGSRGRGIGRALLTRLVAEAHAR GAREVLLEVRADNPVAQALYASLGFEAIAVRPHYYQPDDVDAVVMRAALAATPPAVAE PRDAPAERAGSTVPHAPAHADGDAAPDAGPLVLGIETSCDETGIGIVRGQTLLANVIS SSMDEHARYGGVVPEVAARAHLEALTPAIDAALAEAGVALRDLDAVAVTAGPGLSGAL MVGVGAAKALAVALDIPLHGVNHLVGHVGADLLSTDGRPGVPLETPSIALLVSGGHTS LLLVRDLVDDVELLGETIDDAAGEAFDKVARVLGLPYPGGPHIDRVAADGDPKAIRFP RGLSLPKDMERHRYDFSFSGLKTAVARWVEKRQDAGEPVPVADVAASFREAVVDVLLT KAVAACVDHGIPRLLLGGGVVANARVRELAAERCRAAGIELRIPPLSLCTDNGAMIAA LGARLIESGRAPSGLAFGADSTLPVTVVQVD" misc_feature 552432..552674 /locus_tag="CMS_0523" /old_locus_tag="CMS0523" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3.5e-20" misc_feature 552972..553235 /locus_tag="CMS_0523" /old_locus_tag="CMS0523" /inference="protein motif:HMMPfam:PF00814" /note="HMMPfam hit to PF00814, Peptidase M22,glycoprotease, score 2.8e-22" gene 554015..554440 /locus_tag="CMS_0524" /old_locus_tag="CMS0524" /db_xref="GeneID:6156482" CDS 554015..554440 /locus_tag="CMS_0524" /old_locus_tag="CMS0524" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709295.1" /db_xref="GI:170780963" /db_xref="GeneID:6156482" /translation="MTDPQNPDRSNDGFPPAPSQPAYPAAPAAGSDSPYAAPYQPGQG GAPKKGLAITSMVLGIVCVVLSLPLWFLTFFVGIAAIITGVLARKRNPGTKGFWLTGI ILGIVGVLVSIIVVLVVVVFVNTAIQTGEINGTPIPTAP" misc_feature order(554183..554272,554315..554383) /locus_tag="CMS_0524" /old_locus_tag="CMS0524" /note="2 probable transmembrane helices predicted for CMS0524 by TMHMM2.0 at aa 57-86 and 101-123" gene complement(554530..555771) /locus_tag="CMS_0525" /old_locus_tag="CMS0525" /db_xref="GeneID:6156483" CDS complement(554530..555771) /locus_tag="CMS_0525" /old_locus_tag="CMS0525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709296.1" /db_xref="GI:170780964" /db_xref="GeneID:6156483" /translation="MPIGAEVPRYGGRMDQTDLREVLSLEGLRLLDSLPEPAPGDDMV RMVSALRGEGYSPALVRAVLTQSRLRARARAKFGDFAARMLFTEAGLEQATRLPVAAQ HAGRFQQAGVAHVADLGCGIGGDAMAMAAIGIRVTAVERDEVTAAVAGWNLAPFPEAE VEQGTAEAFSAGRVDGVYLDPARRTDGHSSTRRISDPDAYSPTLSAAFELAAGRAAGI KLGPGLDRDLIPAEAEAQWVSVDGQAVEMGLWFGPTRRDGVRRAALLISSGSQAELTS AADSEDAELGELGEHLYEPDGAVIRARLIGDLARSLDGRMVGEGIAWITSDREQATPF ARGFRVREVLPLDEQRLKRELRARGIGTLEIKKRGVDVDPARLRTRLQLKGDGSATLI ATRVGGRRVAILADRHGVDAG" gene 555845..556174 /gene="groES" /locus_tag="CMS_0526" /old_locus_tag="CMS0526" /db_xref="GeneID:6156484" CDS 555845..556174 /gene="groES" /locus_tag="CMS_0526" /old_locus_tag="CMS0526" /note="10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring" /codon_start=1 /transl_table=11 /product="co-chaperonin GroES" /protein_id="YP_001709297.1" /db_xref="GI:170780965" /db_xref="GeneID:6156484" /translation="MSRTPRRKRSTVSVSIKPLEDRIVIQQVEAEQTTASGLVIPDTA KEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVKYDGQDLLVLSARD VLAVIER" misc_feature 555887..556168 /gene="groES" /locus_tag="CMS_0526" /old_locus_tag="CMS0526" /inference="protein motif:HMMPfam:PF00166" /note="HMMPfam hit to PF00166, Chaperonin Cpn10, score 9.8e-61" misc_feature 555890..555964 /gene="groES" /locus_tag="CMS_0526" /old_locus_tag="CMS0526" /note="PS00681 Chaperonins cpn10 signature." gene 556307..557260 /locus_tag="CMS_0527" /old_locus_tag="CMS0527" /db_xref="GeneID:6156485" CDS 556307..557260 /locus_tag="CMS_0527" /old_locus_tag="CMS0527" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709298.1" /db_xref="GI:170780966" /db_xref="GeneID:6156485" /translation="MTRPTPESSTRTGLIAAVGAYGLWGVLPVFFLLLVPAGAFEIVG WRILFSLVVCAIVITAARRWSRVVAIVRRPRIFLGLGLAGHLILVNWTVYVYGTLSGH VVETALGYFINPIVTVLLGVILLRERLRPLQWAAVCLSAVAVAVIAVGYGQLPWVSLA LAGSFGLYGLVKKRVSGGADALSGLALETAWLVPAATAMLVITGAGAGLTIGTVSPGH TLLLVSTGVVTAGPLLPFGFAAGRLPLSVIGLTQYLAPLLQFAFGVFVLHEAMPPERW AGFAIVWAALVLLTIDMVRASRRPITPVVRRQMDPAVVDGI" sig_peptide 556307..556423 /locus_tag="CMS_0527" /old_locus_tag="CMS0527" /note="Signal peptide predicted for CMS0527 by SignalP 2.0 HMM (Signal peptide probability 0.945) with cleavage site probability 0.728 between residues 39 and 40" misc_feature order(556343..556411,556430..556498,556532..556600, 556613..556681,556700..556768,556874..556942, 556961..557029,557039..557107,557141..557194) /locus_tag="CMS_0527" /old_locus_tag="CMS0527" /note="9 probable transmembrane helices predicted for CMS0527 by TMHMM2.0 at aa 13-35, 42-64, 76-98, 103-125,132-154, 190-212, 219-241, 245-267 and 279-296" misc_feature 556370..556753 /locus_tag="CMS_0527" /old_locus_tag="CMS0527" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 4.5e-10" gene 557439..558719 /locus_tag="CMS_0528" /old_locus_tag="CMS0528" /db_xref="GeneID:6156486" CDS 557439..558719 /locus_tag="CMS_0528" /old_locus_tag="CMS0528" /codon_start=1 /transl_table=11 /product="putative extracellular ligand-binding protein" /protein_id="YP_001709299.1" /db_xref="GI:170780967" /db_xref="GeneID:6156486" /translation="MSAFGRASASRSRSRTALSAVTIAVAGALVLAGCSGGSGDGGGT TGDGGLDLKVGTILPQTGSLAVLGPPEFAGVHLAEDDINAAKAGITMTVTDKDSGDAT TDIASQSATSLIADGNSAIIGAASSGVSKTFIDQVVSANVVQLSPANTAPEFSTYKDN GYYWRTAPSDVLQGRILGNKILQDGKTNVSILYMNDAYGKGLRENIKKTLEAGGASIA AEATFEPSSTDFNSAITSVLAPNPDALVVISFDEIKTIADQLASKGFDFSNFYGTDGN YGVIKETDTNVDIAGAQFTNPGVEAKEDFQGRLQDMVKADGDPALSVFSYAAESYDGT TLLALAALQGKATDGPTLKDNLQSVSEGGTKCTTFADCAKLIEAGTDIDYDGISGPIT FDENGDPTEAYVSVYKYGTGNKATFSEQVYGKLD" sig_peptide 557439..557549 /locus_tag="CMS_0528" /old_locus_tag="CMS0528" /note="Signal peptide predicted for CMS0528 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.367 between residues 37 and 38" misc_feature 557487..557555 /locus_tag="CMS_0528" /old_locus_tag="CMS0528" /note="1 probable transmembrane helix predicted for CMS0528 by TMHMM2.0 at aa 17-39" misc_feature 557646..558674 /locus_tag="CMS_0528" /old_locus_tag="CMS0528" /inference="protein motif:HMMPfam:PF01094" /note="HMMPfam hit to PF01094, Extracellular ligand-binding receptor, score 1.3e-21" gene complement(558863..559540) /locus_tag="CMS_0529" /old_locus_tag="CMS0529" /db_xref="GeneID:6156487" CDS complement(558863..559540) /locus_tag="CMS_0529" /old_locus_tag="CMS0529" /codon_start=1 /transl_table=11 /product="putative branched chain amino acid transport ATP-binding protein" /protein_id="YP_001709300.1" /db_xref="GI:170780968" /db_xref="GeneID:6156487" /translation="MHVDKGELVGIIGPNGAGKSTLLKAIFGQVNVRGGSIELNGQDI TGLKADKLVTRGVGMVPQNNNVFPTLTIDENLQMGAYQKPKMYKERLAFVTDLFPELG KRLKQRAGSLSGGERQMVAMSRALMMDPTVLLLDEPSAGLSPVRQDETFINVAQINRA GVSVMIVEQNARRALQICDRGYVLDQGKDAYEGRGRELMNDPKVIELYLGTLAADQEK AKAAPQP" misc_feature complement(558980..559525) /locus_tag="CMS_0529" /old_locus_tag="CMS0529" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.6e-54" misc_feature complement(559163..559207) /locus_tag="CMS_0529" /old_locus_tag="CMS0529" /note="PS00211 ABC transporters family signature." misc_feature complement(559481..559504) /locus_tag="CMS_0529" /old_locus_tag="CMS0529" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(559618..560541) /locus_tag="CMS_0530" /old_locus_tag="CMS0530" /db_xref="GeneID:6156488" CDS complement(559618..560541) /locus_tag="CMS_0530" /old_locus_tag="CMS0530" /codon_start=1 /transl_table=11 /product="putative branched chain amino acid transport ATP-binding protein" /protein_id="YP_001709301.1" /db_xref="GI:170780969" /db_xref="GeneID:6156488" /translation="MPDKTPVASILDGDAGPGCAKKDPIIVAHGVSRQFGGLKAVDVD HLEIPRGSITALIGPNGAGKTTFFNLLTGFDKPNTGTWEFSGKDLAGMSAYRVARLGM VRTFQLTKALGGMTVLENMRLGATGQGGESFFSALIRPLWRKKEEEITERARGLLRKF KLDTKEEDYADSLSGGQRKLLEMARALMTKPDLVMLDEPMAGVNPALTQSLLHHILDL KTEGMTVLFVEHDMHMVNEIADWVVVMAEGRIVAEGPPSTVMSDPAVIDAYLGAHHDT DLGTLTGQREVAKDMESDLVKDEIEKEAADK" misc_feature complement(559798..560391) /locus_tag="CMS_0530" /old_locus_tag="CMS0530" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 7.3e-55" misc_feature complement(559981..560025) /locus_tag="CMS_0530" /old_locus_tag="CMS0530" /note="PS00211 ABC transporters family signature." misc_feature complement(560347..560370) /locus_tag="CMS_0530" /old_locus_tag="CMS0530" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(560534..561505) /locus_tag="CMS_0531" /old_locus_tag="CMS0531" /db_xref="GeneID:6156489" CDS complement(560534..561505) /locus_tag="CMS_0531" /old_locus_tag="CMS0531" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709302.1" /db_xref="GI:170780970" /db_xref="GeneID:6156489" /translation="MNSNFIFLALGEIFSPTTAAYALATVGLVIHFGFTGLLNFGQAG FMAIGGYAFAITAVMYEWPVWASLLAAIVASTVFALILGIPTLRLRADYLSIVTIAAA EIIRLSVKTPEFSSVTGGSEGINGAANGFNALNPLPEGRFGAGVLTYSSDQWWIRIVG WGLVGIACLLVFLLMRSPWGRVLKGVREDEDAVRALGKNVYSYKMQALVLGGVFGGLA GVVFILPRSLQPDNYGTQLTFFLYTIMLLGGAATIFGPVIGSIIFWVTLSLSDGLLSL AVTNEWLPLSSTQQGPIRFIIVGVALMLLVIFRPQGIFGKKKETHFA" misc_feature complement(order(560582..560635,560708..560776, 560834..560893,560978..561046,561254..561322, 561335..561403)) /locus_tag="CMS_0531" /old_locus_tag="CMS0531" /note="6 probable transmembrane helices predicted for CMS0531 by TMHMM2.0 at aa 7-29, 34-56, 126-148, 177-196,216-238 and 263-280" misc_feature complement(560588..561421) /locus_tag="CMS_0531" /old_locus_tag="CMS0531" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 4.9e-28" gene complement(561512..562912) /locus_tag="CMS_0532" /old_locus_tag="CMS0532" /db_xref="GeneID:6156490" CDS complement(561512..562912) /locus_tag="CMS_0532" /old_locus_tag="CMS0532" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709303.1" /db_xref="GI:170780971" /db_xref="GeneID:6156490" /translation="MAFACTALLLSSPSAAHADPRAAPQAVDPASAEQSLLVWVRADA DNAGIAGVTVKVSGGGVEATGTTGADGKAEVGLSAPGSFTVEVDESTIPEGAGVPRAG SSPREIDVAAGNKNVPAFFFIAPDGAASGAAGSTPAPSASDDAGTSTGGETAAPDTET GAVSGTAEPVTENNFWKIFWPKVVTGLIFGLLLALAAIGLSLIYGTTGLNNFAHGELV TFGALMAYLFSNVLGLNPVLAIIITVVLGGAFGFVQDAAIWKPLRRRRLGLVPLMIVT IGLSLALRYTFQFIFGADRLTLPNSSAPFLVVGPVSLKFTDVVGAIVSIVLLVAVAYV LLYTKIGKATRAVSDNRSLAAASGIDVEGVIRVVWIGGAALAALSGVFIAYYQSLRWD TGASILLLVFSAVVLGGLGTAFGALIGSIVIGVFINVSTMVLPENMKYVAALVVMIVI LLVRPQGILGRKDRIG" sig_peptide complement(561512..561565) /locus_tag="CMS_0532" /old_locus_tag="CMS0532" /note="Signal peptide predicted for CMS0532 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.711 between residues 18 and 19" misc_feature complement(order(561539..561595,561632..561700, 561758..561826,561902..561970,562049..562117, 562154..562222,562298..562366)) /locus_tag="CMS_0532" /old_locus_tag="CMS0532" /note="7 probable transmembrane helices predicted for CMS0532 by TMHMM2.0 at aa 183-205, 231-253, 266-288,315-337, 363-385, 405-427 and 440-458" misc_feature complement(561560..562369) /locus_tag="CMS_0532" /old_locus_tag="CMS0532" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 9.9e-35" gene 563210..564712 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /db_xref="GeneID:6156491" CDS 563210..564712 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /codon_start=1 /transl_table=11 /product="inosine-5'-monophosphate dehydrogenase" /protein_id="YP_001709304.1" /db_xref="GI:170780972" /db_xref="GeneID:6156491" /translation="MDQSDPFGVIGLTYDDVMLLPGHTDVIPSEADTTSRLTRNITVA APLLSSAMDTVTEARMAIAMARQGGLGVIHRNLSIEDQAAFVDKVKRSESGMITNPVT TRPDATVAEVDALCGQFCVSGLPVVESDGTLVGIITNRDMRFVSPVQAATTLVRDVMT PTPLITGQVGIDPDHAIAIFAEHKIEKLPLVDDQGKLRGLITVKDFDKSEQYPDATKD AEGRLRVGAAIGFFGDAWQRALALVEAGVDVLVVDTANGDSKGVLDIIRRLKSDPATS HVDVIGGNVATRSGAQALIEAGADAIKVGVGPGSICTTRVVAGVGVPQVTAVYEASLA ARAAGIPVIADGGLQYSGDIAKALVAGADTVMLGSLLAGCDESPGDLMFVGGKQFKSY RGMGSLGALQTRGSKTSYSKDRYFQSDVPNDDKLIPEGIEGQVPYRGSLANVVYQLTG GLRQSMFYVGARTVGELKDRGRFVRITAAGLKESHPHDVQMVVEAPNYRR" misc_feature 563237..564670 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /inference="protein motif:HMMPfam:PF00478" /note="HMMPfam hit to PF00478, IMP dehydrogenase/GMP reductase, score 3.8e-194" misc_feature 563489..563650 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 1.3e-11" misc_feature 563681..563842 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 3.6e-08" misc_feature 564113..564151 /locus_tag="CMS_0533" /old_locus_tag="CMS0533" /note="PS00487 IMP dehydrogenase / GMP reductase signature." gene 564880..565980 /locus_tag="CMS_0534" /old_locus_tag="CMS0534" /db_xref="GeneID:6156492" CDS 564880..565980 /locus_tag="CMS_0534" /old_locus_tag="CMS0534" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709305.1" /db_xref="GI:170780973" /db_xref="GeneID:6156492" /translation="MQPTPPSPAVRPLEAATLGPPGVALILSGILPVSPTEAVGEEER AEAAAVARAEARGELVRVRAGVHVERAAWEAVTACERHLLRIRALARVSPAPVVVGGA SAAAVHGLPRVTPWPQAVTLLDVPGLPQGRRAGTRIVRDPSYGRSSLVRGVGGVRLPG LAATALAASHEAAVAAVRGAAGCGPGWSAHGLVALDDALAPARVAATTRAELHAEREL RGPGPWSRRAELLVDAADGSAAGPVESIARGVAGEAGLARPIVGPLVPGHGRLALAWP RQRVGLRIHRVHPGGRIAAGCCAAEGHEVAEWRVVEATERDVLVAGRLRALLLHAGLE PERRAASAVAGALADPERGRSRRSPPLGCAGE" gene 565973..567091 /locus_tag="CMS_0535" /old_locus_tag="CMS0535" /db_xref="GeneID:6156493" CDS 565973..567091 /locus_tag="CMS_0535" /old_locus_tag="CMS0535" /note="catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate" /codon_start=1 /transl_table=11 /product="inosine 5-monophosphate dehydrogenase" /protein_id="YP_001709306.1" /db_xref="GI:170780974" /db_xref="GeneID:6156493" /translation="MSDVEIGRAKRARRVYAFDDIAIVPSRRTRDPQDVSVSWSIDAY QFEIPFLAAPMDSVVSPATAIAMGRFGGLGVLDLEGLWTRYEHPERLLEEIRSLPPES ATARMQQIYSEPIKPELITARIAEIRAAGVVVAAALSPQRTADHYETVVAAGVDLFVI RGTTVSAEHVSKGAAPLNLKKFIYELDVPVIVGGAATYTAALHLMRTGAAGVLVGFGG GAASTTRSTLGIHAPMATALSDVAGARRDYMDESGGRYVHVIADGGLGSSGDIVKAIA VGADAVMLGSTLARATDAPGQGFHWGAEAHHSELPRGHRVRVDQVAPLEQILYGPSTT ADGSANLVGALRRAMATTGYSDLKEFQRVEVVVAPYGK" misc_feature 566012..567088 /locus_tag="CMS_0535" /old_locus_tag="CMS0535" /inference="protein motif:HMMPfam:PF00478" /note="HMMPfam hit to PF00478, IMP dehydrogenase/GMP reductase, score 1.2e-29" gene 567193..567726 /locus_tag="CMS_0536" /old_locus_tag="CMS0536" /db_xref="GeneID:6156494" CDS 567193..567726 /locus_tag="CMS_0536" /old_locus_tag="CMS0536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709307.1" /db_xref="GI:170780975" /db_xref="GeneID:6156494" /translation="MAEVRRVKLPGVGVLHTFITDDGGKVGVIAHRSGHSDLITFSEE QDGPDTQKVSLRLSEDEAHTLAELLGGTRITESLDKLDQIPGLSIDWFTVDYDDHIAG QALGNLASRGVVGLTVVAVVRGESANPAPSDDFTVYPGDTLVVAGSPEKVAKAFAFYR TGEFPHRPAPGSAPDGG" misc_feature 567457..567672 /locus_tag="CMS_0536" /old_locus_tag="CMS0536" /inference="protein motif:HMMPfam:PF02080" /note="HMMPfam hit to PF02080, TrkA-C, score 4.3e-07" gene 567730..569253 /locus_tag="CMS_0537" /old_locus_tag="CMS0537" /db_xref="GeneID:6156495" CDS 567730..569253 /locus_tag="CMS_0537" /old_locus_tag="CMS0537" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709308.1" /db_xref="GI:170780976" /db_xref="GeneID:6156495" /translation="MHHGLDLIVLGLLFVLAYAFGQLGKRIGLPAIPIYMLVGLLASP NVDWFPLDFASGDIELIAVFGLILLLFNLGLEFDQDEFFGNAGKLIISGGSYVLINMG VGFAFGFALGWGTCEALIIAGMTATSSSAIVTKLLIELNRLANDETPMILGVTVVEDI FIAVYLAIVSVVLSGQTEPWAVVGQLAVSFAFLVVMFTVARKGGAFLSRFMRTRDVEL FTVLFFGLAILFGGIGEVLGVTDAIGAFLIGLVLGATRVRNRIEQIAIPLRDVFGAFF FLNFGLALDPGEFPTVVVPVLGAVLMTVVLNLIAGQFVAWLNGHGAQAGINTAFILQN RGEFALILATLSLSAGLDERIQPFAGLYVLVMAIMGPLLAANSVRIGTAVLPTRYRSA TKRAAEKAERDAERAGALALFEAAERGAHAPADAFDDGLAVAGSRPGTATRGTTPGTG PETEDVPGTPRAADADADADGPDGRGPAPARRRAEQAGQQSDHDTWTPPTREREPDY" misc_feature order(567748..567801,567814..567882,567901..567954, 567997..568065,568084..568152,568180..568248, 568267..568326,568384..568485,568522..568581, 568609..568677,568801..568869) /locus_tag="CMS_0537" /old_locus_tag="CMS0537" /note="11 probable transmembrane helices predicted for CMS0537 by TMHMM2.0 at aa 7-24, 29-51, 58-75, 90-112,119-141, 151-173, 180-199, 219-252, 265-284, 294-316 and 358-380" gene 569253..570242 /locus_tag="CMS_0538" /old_locus_tag="CMS0538" /db_xref="GeneID:6156496" CDS 569253..570242 /locus_tag="CMS_0538" /old_locus_tag="CMS0538" /note="Hydrophobicity profile typical of sortase-sorted surface proteins but no LPXTG motif or similar." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709309.1" /db_xref="GI:170780977" /db_xref="GeneID:6156496" /translation="MTHASDPRTHAEPRPDAEPAGSGPGGRDAPGPSLGQVARRPRSV ALLALALVIAAGFAALGQWQLARAVESGVVIERDTETALPLGTLVEPQGYVTDRSAGH MVTVAGSLVPGDFVVVSDRLNAGRTGAWVVGHLSITDDGGSADPAPDALPDSVPVALG WAATDEEAAGVAAKLNAGDGSPVGVQEIVGRFLPSEQPEPAGEGQDPERMTRLSTAAL INLWPGELGDVYNGFIVASTPVAGLTAIDSPPPSEAVQLNWLNIFYAAEWAVFAIFAI VVWYRTVRDTWTREQPGYRDDDDDDDDDDPLPEGGLDDAAGAPGRGIRADADR" misc_feature order(569382..569450,570024..570092) /locus_tag="CMS_0538" /old_locus_tag="CMS0538" /note="2 probable transmembrane helices predicted for CMS0538 by TMHMM2.0 at aa 44-66 and 258-280" gene 570252..570794 /locus_tag="CMS_0539" /old_locus_tag="CMS0539" /db_xref="GeneID:6156497" CDS 570252..570794 /locus_tag="CMS_0539" /old_locus_tag="CMS0539" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709310.1" /db_xref="GI:170780978" /db_xref="GeneID:6156497" /translation="MAYGLKRSDVPQIRRVLGFYRVMAFITGAFLLLLVVEMGIKYLP GFQFVDGSLQYLAGAGYELELNGPSGFLALSPADTLTGTNLSLLIQIVHGNIYVVYLI SDFLLWQKMRWSFTRFILIAAGGVVPFLSFIVEARIARRVREVIAKLEAPRRPAPAAD DRDDADPRPIDPTTTTEATT" misc_feature order(570300..570368,570507..570575,570594..570653) /locus_tag="CMS_0539" /old_locus_tag="CMS0539" /note="3 probable transmembrane helices predicted for CMS0539 by TMHMM2.0 at aa 17-39, 86-108 and 115-134" gene 570791..572371 /gene="guaA" /locus_tag="CMS_0540" /old_locus_tag="CMS0540" /db_xref="GeneID:6156498" CDS 570791..572371 /gene="guaA" /locus_tag="CMS_0540" /old_locus_tag="CMS0540" /note="contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway" /codon_start=1 /transl_table=11 /product="GMP synthase" /protein_id="YP_001709311.1" /db_xref="GI:170780979" /db_xref="GeneID:6156498" /translation="MSVDNPTNQRPVLVVDFGAQYAQLIARRVREANVYSEIVPSTIT AEEIRAKDPSGIVLSGGPSSVYEEGSPGLDEGILELGVPVLGICYGFQVMARALGGEV AHTGQREYGSTAVTLTPGSTLLDGQPDDQTVWMSHGDSVSKAPEGFEILASSASTPVA AFASDERRLYGVQWHPEVKHSAHGQAVLENFLHRAAGIPGDWNSGNVIAEQVERIRAQ VGDARVICGLSGGVDSAVAAAIVHRAVGDQLTCVFVDHGLLRQDERRQVEEDYVAATG VRLVTVDAADQFLDGLAGVTDPEAKRKIIGREFIRSFEGAAEALVLEAKADGEPIRFL VQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFELVEPLRTLFKDEVRAIGRELG LPEAIVGRQPFPGPGLGIRIVGEVTAERLELLRKADAIARAELTAAGLDDEIWQCPVV LLADVRSVGVQGDGRTYGHPIVLRPVSSEDAMTADWTRLPYDVLARISNRITNEVDGV NRVVLDVTSKPPGTIEWE" misc_feature 570827..571375 /gene="guaA" /locus_tag="CMS_0540" /old_locus_tag="CMS0540" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 1.2e-55" misc_feature 571037..571072 /gene="guaA" /locus_tag="CMS_0540" /old_locus_tag="CMS0540" /note="PS00442 Glutamine amidotransferases class-I active site." misc_feature 572003..572365 /gene="guaA" /locus_tag="CMS_0540" /old_locus_tag="CMS0540" /inference="protein motif:HMMPfam:PF00958" /note="HMMPfam hit to PF00958, GMP synthase, C-terminal,score 3.8e-69" gene complement(572480..573284) /locus_tag="CMS_0541" /old_locus_tag="CMS0541" /pseudo /db_xref="GeneID:6156499" misc_feature complement(572484..573161) /locus_tag="CMS_0541" /old_locus_tag="CMS0541" /inference="protein motif:HMMPfam:PF06539" /note="HMMPfam hit to PF06539, Protein of unknown function DUF1112, score 2.1e-64" /pseudo gene 573417..574475 /locus_tag="CMS_0542" /old_locus_tag="CMS0542" /db_xref="GeneID:6156500" CDS 573417..574475 /locus_tag="CMS_0542" /old_locus_tag="CMS0542" /EC_number="3.1.4.46" /codon_start=1 /transl_table=11 /product="putative glycerophosphoryl diester phosphodiesterase" /protein_id="YP_001709312.1" /db_xref="GI:170780980" /db_xref="GeneID:6156500" /translation="MRGVDHAPRTRPLVIAHRGASGYRPEHSAAAVRLGFAQGADAVE PDLVASSDGVLVIRHENELSGTTDVADRPEFADRRATRVVDGVERSGWFTEDMTWAEI RTLRCRERVPAARPDSAAHDDQETVLSLPDLLRIIDQESARHGRPLGMVAEMKHATHF AALGMPLDELLARDLREHGWAEDASRLTIESFERSALLGVRAHGIAARLVYLLDGRGA AIDEVARDGDSAITFDEQLTDAGLAALAEEVDGISVGVERICPAGGFGSAGEAAPVSD LVPRAHDAGLSVFTWTLRPENAFLPQPLRGPGARSAHGDFRTHWGRLLDSGVDGVFVD HPDLAVELVGDRAAGAAS" misc_feature 573465..574430 /locus_tag="CMS_0542" /old_locus_tag="CMS0542" /inference="protein motif:HMMPfam:PF03009" /note="HMMPfam hit to PF03009, Glycerophosphoryl diester phosphodiesterase, score 5.5e-29" gene complement(574486..575448) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /db_xref="GeneID:6156501" CDS complement(574486..575448) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /note="P/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709313.1" /db_xref="GI:170780981" /db_xref="GeneID:6156501" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(574498..575040) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(575125..575190) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(575190..575311) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(575311..575376) /locus_tag="CMS_0543" /old_locus_tag="CMS0543" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(575546..575875) /locus_tag="CMS_0544" /old_locus_tag="CMS0544" /pseudo /db_xref="GeneID:6156502" gene 576060..576278 /locus_tag="CMS_0544A" /old_locus_tag="CMS0544A" /db_xref="GeneID:6156503" CDS 576060..576278 /locus_tag="CMS_0544A" /old_locus_tag="CMS0544A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709314.1" /db_xref="GI:170780982" /db_xref="GeneID:6156503" /translation="MESGAPAPLRTTATEVAPAAGGDDASDALLAEAFGFTITHRGAE EELVMGDVTLCCSTTCSSSGGGGRQQPR" gene 576289..577200 /locus_tag="CMS_0545" /old_locus_tag="CMS0545" /db_xref="GeneID:6156504" CDS 576289..577200 /locus_tag="CMS_0545" /old_locus_tag="CMS0545" /note="Matches (only) two proteins from secondary metabolism gene clusters." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709315.1" /db_xref="GI:170780983" /db_xref="GeneID:6156504" /translation="MDSSTTYSVSPRYAVREVEDTLHLLGGRELVSLQLPSGDAVSAV SRLLSRPFTRADLDRAFAAHAPAVARLVDELVLRDVVVGAPDGSAGSVPDELAHVLDE ARRNGGDRTGLGPVRDPASPARVALVGDMIPSLLTGLAEALPSAELGDEDDADLVIAV ASRPVLRDVGARMHAAGRPWLPVYPFDGRFQLVGPVVVPGEGPCLECVALRWASTTPF AADHAAAADAVAVVPRDPSLDAITAGFAARYAARWIHAHDWLVASTVLVIEPKLMEAE AHAVFRVARCGTCGPRPYAGVVSPWRA" gene 577197..578459 /locus_tag="CMS_0546" /old_locus_tag="CMS0546" /db_xref="GeneID:6156505" CDS 577197..578459 /locus_tag="CMS_0546" /old_locus_tag="CMS0546" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709316.1" /db_xref="GI:170780984" /db_xref="GeneID:6156505" /translation="MSRGVAGVVSPYTGLVEHAHPMAFTPDAIPDALYSGRSADTGFL TGTASERFSMGPGGSRMEARRSCIGEAVERMSLAGAPGGFRAPLGADARQVGPDAFQR FHPTQREDPAFHFERARPGDLLTWMPARSLHRGDTVHVPAQMVVFDDPHRADGHREPH VEPATSSGVAAGPHFGFAAGRAVLELIERDAFQRTWLRESTPPAFGWRGSPRLAAATL RELERLEELCGRFEASFTVRVLDAAADVPVLLAVMRSDRIGVAVGCAADFRLDRAILN AVREALHTHNWCLRLLAEPTIDPADVVEFEDHIRLHCRPSARPLTAALDVSDERVAAV GGPASWAEVVAGLDREGIEVLLADITAPEVRAAGFHVVRALSPDLVALDVVHTARFLG HPRLYRRWRDGPALDGPADLVPVPHPFP" gene 578518..579486 /locus_tag="CMS_0547" /old_locus_tag="CMS0547" /db_xref="GeneID:6156506" CDS 578518..579486 /locus_tag="CMS_0547" /old_locus_tag="CMS0547" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709317.1" /db_xref="GI:170780985" /db_xref="GeneID:6156506" /translation="MSTIETDAAPDRAEAPTDPSAPADPGAAGSARSLGSVGPIFSVG GAVDRPAGDPAEDFHEASKITRITHPGWTDVRYAHQMAQEAQGVADAGPGGATSAPRL LPALPLPRALPLRHELGATLAARRSAEPRTLGRPVELAELATVLRLAYGPRGDGTPRR FVPSGGGLYPLDLHVVARSVVGLEPGIHQLDPLEETLVDVSGLDRDGQLARFRRAAPS LMAPIPETAAVTVVITGSFERSRCKYGLRGYRLTLLEAGHVGQNALLVATALGLPVLG WVGFVDHELDAVLGLDGVTQSSLYAISFGGADPGARRFADEEASHD" gene 579479..580435 /locus_tag="CMS_0548" /old_locus_tag="CMS0548" /db_xref="GeneID:6156507" CDS 579479..580435 /locus_tag="CMS_0548" /old_locus_tag="CMS0548" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001709318.1" /db_xref="GI:170780986" /db_xref="GeneID:6156507" /translation="MTDAVELDGITRTFGRTRALDAASFSLAPGLVHALLGPNGSGKT TAIDILTATRHPDAGRARVLGHDVRRGGPTAALVAVMPQALAFPEYLTVREVLALALV PHAAALTPAAAIDRFDLDRLASRQTGGLSGGERRRVALACVVGAGTPVVVLDEPSAAL DIPGRAAVRDAIAAVRDSGRTVLLASHDMEEVAALADTVVCLDHGRVVGHWTAADFRG LAGVRRVGFDATAAEARRLRSSGAVPEAGEEPRGLERIRWVIDTDRSDVVAGLVLAAV PQPGLTVVEPGLGEIVERVLADGADAIPADPSRAEDHAGCAR" misc_feature 579566..580093 /locus_tag="CMS_0548" /old_locus_tag="CMS0548" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.1e-44" misc_feature 579587..579610 /locus_tag="CMS_0548" /old_locus_tag="CMS0548" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 579866..579910 /locus_tag="CMS_0548" /old_locus_tag="CMS0548" /note="PS00211 ABC transporters family signature." gene 580432..581203 /locus_tag="CMS_0549" /old_locus_tag="CMS0549" /pseudo /db_xref="GeneID:6156508" gene 581325..582389 /locus_tag="CMS_0550" /old_locus_tag="CMS0550" /db_xref="GeneID:6156509" CDS 581325..582389 /locus_tag="CMS_0550" /old_locus_tag="CMS0550" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709319.1" /db_xref="GI:170780987" /db_xref="GeneID:6156509" /translation="MPQITTPVALFTGQWADLPLEEVARLASGWGFDALEIACSAEHL DVWRAAEDPAYLRGRLEILERHGLQVHALSQHLTGQAVCDDPIDFRHQAILRSKVWGG GQAEGVRQRAAEELKLTAKAAAALGVTRVTGFTGSRIWPYVAMFPPVPESVIDAGYQD FADRWNPIIDVFDDEGVRYALEVHPSEIAYDYWTTKRTLEAIGHRPGFGLNWDPSHMM WQGIDPVGFLLDFADRIYHVHAKDTRVTTDGRGGRLGSHLPWGNPHRGWDFVSVGHGD VPFERAFRALRSIGYDGPVSVEWEDAGMDRLHGAPDALARVRSLLWPTPDSLFDSSFA NNRDDAPGSAPADGPTGSTA" misc_feature 581394..582155 /locus_tag="CMS_0550" /old_locus_tag="CMS0550" /inference="protein motif:HMMPfam:PF01261" /note="HMMPfam hit to PF01261, AP endonuclease, family 2,score 2.6e-38" misc_feature 582156..582320 /locus_tag="CMS_0550" /old_locus_tag="CMS0550" /inference="protein motif:HMMPfam:PF07582" /note="HMMPfam hit to PF07582, AP endonuclease 2,C-terminal, score 1.6e-18" gene 582386..583325 /locus_tag="CMS_0551" /old_locus_tag="CMS0551" /pseudo /db_xref="GeneID:6156510" misc_feature 582446..582547 /locus_tag="CMS_0551" /old_locus_tag="CMS0551" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" /pseudo misc_feature 582614..582712 /locus_tag="CMS_0551" /old_locus_tag="CMS0551" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" /pseudo misc_feature 582911..583030 /locus_tag="CMS_0551" /old_locus_tag="CMS0551" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" /pseudo misc_feature 583055..583183 /locus_tag="CMS_0551" /old_locus_tag="CMS0551" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" /pseudo gene 583388..584521 /locus_tag="CMS_0552" /old_locus_tag="CMS0552" /db_xref="GeneID:6156511" CDS 583388..584521 /locus_tag="CMS_0552" /old_locus_tag="CMS0552" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709320.1" /db_xref="GI:170780988" /db_xref="GeneID:6156511" /translation="MRGYFPRSEEIPHGIMGVRATRRPDIPSASFPETPVNITTTTWL ITIAVTIAFFVYEFFTHVRKPHEPTIGESARWSVFYIGLALIFGVGIGITNGWGFGGE YFAGYLTEKALSIDNLFVFLLIMTGFAVPRKYQQKVLMIGIVIALIMRAGFIALGAAL IENFSWVFYIFGALLFVLAYQQLKGDHGGNAADNMFVRIARRILPVHDEFVGDRFTTK IDGKRFVTPLLLCVIAIGFVDLVFALDSIPAIYGLTNEAYIVFTANAFALMGLRQLYF LIGGLLERLVYLSQGLAVILAFIGLKLVLHAMHVNELPFINGGEPMLWAPEIPIWFSL LFIGATITVATVASLAKTRGDKQKKDRASVDGETVTRATEEKH" misc_feature order(583487..583555,583613..583681,583724..583780, 583799..583867,583877..583930,584057..584113, 584156..584224,584243..584311,584369..584437) /locus_tag="CMS_0552" /old_locus_tag="CMS0552" /note="9 probable transmembrane helices predicted for CMS0552 by TMHMM2.0 at aa 34-56, 76-98, 113-131, 138-160,164-181, 224-242, 257-279, 286-308 and 328-350" misc_feature 583691..584431 /locus_tag="CMS_0552" /old_locus_tag="CMS0552" /inference="protein motif:HMMPfam:PF03741" /note="HMMPfam hit to PF03741, Integral membrane protein TerC, score 1.7e-70" gene 584604..585413 /locus_tag="CMS_0553" /old_locus_tag="CMS0553" /db_xref="GeneID:6156512" CDS 584604..585413 /locus_tag="CMS_0553" /old_locus_tag="CMS0553" /codon_start=1 /transl_table=11 /product="putative two component response regulator" /protein_id="YP_001709321.1" /db_xref="GI:170780989" /db_xref="GeneID:6156512" /translation="MVISWPLHRNIRMMDPVTTATPSGFQPAAAPQPRLTRADGSPIR VLVVDDEASLTDLLQMALRYEGWQIRTAENGHQALAAAREFKPDAVVLDIMLPDLDGL QVLSRLRADAEDIPVLFLTAKDSLDDRLAGLTAGGDDYVTKPFSLEEVVARLRGLIRR STLVVSDTVDPVIRVGDLTLDEDSHEVARAGDPIELTATEFELLRYLMRNPRRVLSKL QILDRVWSYDFGGKSSVVEIYISYLRRKIDAGRNPMIHTVRGSGYMLKAAE" misc_feature 584730..585089 /locus_tag="CMS_0553" /old_locus_tag="CMS0553" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.6e-39" misc_feature 585174..585398 /locus_tag="CMS_0553" /old_locus_tag="CMS0553" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 1.3e-22" gene 585515..587098 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /db_xref="GeneID:6156513" CDS 585515..587098 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /codon_start=1 /transl_table=11 /product="putative two component sensor kinase" /protein_id="YP_001709322.1" /db_xref="GI:170780990" /db_xref="GeneID:6156513" /translation="MTLRRRLVLSVVGLLALASIFIGTVSILALRTSLMQQVDQQLEA TAARSQDFVDREPGGYGSFPGAPGGLGAFGQQVGTISATIIDGVVSGGYIADRSAAQG EPGGAGAVELTQRQSEQLQSVPTDGVPRTVDLGGALGSYRLVGQTSSSGATIVTGLPT KPADDVVEQLILVITVVAAITLALAALLGTLIVRRALRPLDRVVDTATHVAALELDRG DVALEARVPASDTDERTEVGRVGAALNGLLGHVAAALSSRQASEAKVRRFVSDASHEL RTPLASIRGYAELTRRGPHQLPEDVTHSLSRIESESVRMTTIVEDLLLLARLDEGREL ESDPIDLTRILLDTVGDASAAGPDHDWDLDLPDGSVTVPGDDARLRQVVVNLLANART HTPAGTRVVTSLAVEGAGPDAHTVIRVTDDGPGIPPALQETLFERFVRGDGSRARTTG GTGLGLAIAQAIVSAHHGAVWVESEPGRTVFGVRLPVVRRAGEARDASGPPADAPSDR WAPPSGAPVADRPGPPGGS" sig_peptide 585515..585601 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /note="Signal peptide predicted for CMS0554 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.336 between residues 29 and 30" misc_feature order(585533..585601,585728..585796,586022..586090) /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /note="3 probable transmembrane helices predicted for CMS0554 by TMHMM2.0 at aa 7-29, 72-94 and 170-192" misc_feature 586034..586273 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 7.1e-07" misc_feature 586304..586507 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 2.3e-22" misc_feature 586634..586978 /locus_tag="CMS_0554" /old_locus_tag="CMS0554" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1e-40" gene 587100..587366 /locus_tag="CMS_0555" /old_locus_tag="CMS0555" /db_xref="GeneID:6156514" CDS 587100..587366 /locus_tag="CMS_0555" /old_locus_tag="CMS0555" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709323.1" /db_xref="GI:170780991" /db_xref="GeneID:6156514" /translation="MDPVRRLMFWLRVPFVADAALVVIGIALLVGGDGVGWWVLVFAG LRAVVGVVAVVWIAPRMIARLGTGAEPEEPGTDPARPDAGPARR" misc_feature order(587124..587192,587202..587270) /locus_tag="CMS_0555" /old_locus_tag="CMS0555" /note="2 probable transmembrane helices predicted for CMS0555 by TMHMM2.0 at aa 9-31 and 35-57" gene 587418..587960 /locus_tag="CMS_0556" /old_locus_tag="CMS0556" /db_xref="GeneID:6156515" CDS 587418..587960 /locus_tag="CMS_0556" /old_locus_tag="CMS0556" /note="catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis" /codon_start=1 /transl_table=11 /product="N-acetylglutamate synthase" /protein_id="YP_001709324.1" /db_xref="GI:170780992" /db_xref="GeneID:6156515" /translation="MSAEPAVVEPAEPAGGIRVRRARTGDVPRIQQLVEPLVMEGILL GKDLVVLYENVQEFRVAVDAAGEVVGCGALHVMWEDLGEIRTLAASPHTRGTGVGHAL LERLEDDARELGLSRLFCLTFEVGFFSRHGYHEVAESIIAQEIYYEMLRSHDEGIAEF LDLSRVKPNTLGNTRMLKAL" misc_feature 587595..587819 /locus_tag="CMS_0556" /old_locus_tag="CMS0556" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3.1e-14" gene 588063..588728 /locus_tag="CMS_0557" /old_locus_tag="CMS0557" /db_xref="GeneID:6156516" CDS 588063..588728 /locus_tag="CMS_0557" /old_locus_tag="CMS0557" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709325.1" /db_xref="GI:170780993" /db_xref="GeneID:6156516" /translation="MSSTSTSPGGRPSAAVYRRRRLLALLVVVAVIAVVVIIVSNLGR GTADTAAPGATPTADAAPDAAAPADPDPTPSATASAGTETNADGSCAAGQLTVTPVTD AASYKAGVLPKLSFTVTNTGMEPCTANLGTTTQVFTISSGSDVYWKSTDCQTGAEDAQ VELAARTPQTSSPFEWSRQRSSTTTCEEKQRPAVPAGGATYTLSVEVAGVKSAEPKSF LLY" sig_peptide 588063..588242 /locus_tag="CMS_0557" /old_locus_tag="CMS0557" /note="Signal peptide predicted for CMS0557 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.964 between residues 60 and 61" misc_feature 588123..588191 /locus_tag="CMS_0557" /old_locus_tag="CMS0557" /note="1 probable transmembrane helix predicted for CMS0557 by TMHMM2.0 at aa 21-43" gene 588846..589004 /locus_tag="CMS_0558" /old_locus_tag="CMS0558" /db_xref="GeneID:6156517" CDS 588846..589004 /locus_tag="CMS_0558" /old_locus_tag="CMS0558" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709326.1" /db_xref="GI:170780994" /db_xref="GeneID:6156517" /translation="MTDTTETHAEHTVAEHQHGADCGHETVTHEDHVDYVHDGHKHAE HGDHYDEH" gene 589117..589431 /locus_tag="CMS_0559" /old_locus_tag="CMS0559" /db_xref="GeneID:6156518" CDS 589117..589431 /locus_tag="CMS_0559" /old_locus_tag="CMS0559" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_001709327.1" /db_xref="GI:170780995" /db_xref="GeneID:6156518" /translation="MTYPPPGFEQAADLFKALSSPSRLGLIGLLASRKLSVSELVEES GLSQPLVSQHLRVLRSAGLVNVERDGRIARYEVADTHVTHVVDDAVAHVREHVVGSVD AG" misc_feature 589159..589392 /locus_tag="CMS_0559" /old_locus_tag="CMS0559" /inference="protein motif:HMMPfam:PF01022" /note="HMMPfam hit to PF01022, Bacterial regulatory protein, ArsR, score 2.8e-24" misc_feature 589219..589284 /locus_tag="CMS_0559" /old_locus_tag="CMS0559" /note="Predicted helix-turn-helix motif with score 1380.000, SD 3.89 at aa 35-56, sequence LSVSELVEESGLSQPLVSQHLR" gene complement(589491..590882) /locus_tag="CMS_0560" /old_locus_tag="CMS0560" /db_xref="GeneID:6156519" CDS complement(589491..590882) /locus_tag="CMS_0560" /old_locus_tag="CMS0560" /note="Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /protein_id="YP_001709328.1" /db_xref="GI:170780996" /db_xref="GeneID:6156519" /translation="MSEAPGRVPRMARIHSTYRCSECGWTTPKWVGRCAECQSWNTVA EVSQTPAAAGRVTTLTPAGSSQARSIMHVGTASASHMPSGVGELDRVLGGGIVPGAAI LMSGEPGVGKSTLLLEVAARAAAKGAKVLYVTAEESVAQVRMRAERTGGLQESLMIAA ETDLGTILGHIEQVAPDLLIVDSVQTVSSSTSDGLPGHPGQVREVAVTLIRVCKERDL PLLLVGHVTKDGSIAGPRLLEHLVDVVCQFEGDRQTSLRFIRALKNRFGPTDEVGCFE MAGDGIVEVPDPSGMFLSRGVHSVSGTCVTVAMEGRRALPVEVQALVVDTKAPQPRRV VNGVDASRVAMLLAVLEKRANVRLSDRDVYVSTVGGVRLTEPAADLAIAVALVSAVNG KAMPHDLAAFGEISLAGEIRGVTSAPQRAAEARRLGFTQIVDAEWGPLFSALGRAFSL AKSEREKELDEAF" misc_feature complement(590544..590567) /locus_tag="CMS_0560" /old_locus_tag="CMS0560" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(590934..591896) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /db_xref="GeneID:6156520" CDS complement(590934..591896) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709329.1" /db_xref="GI:170780997" /db_xref="GeneID:6156520" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(590946..591488) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(591573..591638) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(591638..591759) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(591759..591824) /locus_tag="CMS_0561" /old_locus_tag="CMS0561" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 592001..592321 /locus_tag="CMS_0562" /old_locus_tag="CMS0562" /db_xref="GeneID:6156521" CDS 592001..592321 /locus_tag="CMS_0562" /old_locus_tag="CMS0562" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709330.1" /db_xref="GI:170780998" /db_xref="GeneID:6156521" /translation="MAVFATPGEFTERVLEVVAEIPSGRVMTYGDVAAVFGRRGARTV GMVLRYHGAGLPWWRVLRAGGHPPTGLADETRPRYESEGTPLLDAPTDAGYRVDLEAA RWFP" misc_feature 592019..592261 /locus_tag="CMS_0562" /old_locus_tag="CMS0562" /inference="protein motif:HMMPfam:PF01035" /note="HMMPfam hit to PF01035,Methylated-DNA-[protein]-cysteine S-methyltransferase,score 1.3e-06" gene 592387..592893 /locus_tag="CMS_0563" /old_locus_tag="CMS0563" /db_xref="GeneID:6156522" CDS 592387..592893 /locus_tag="CMS_0563" /old_locus_tag="CMS0563" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709331.1" /db_xref="GI:170780999" /db_xref="GeneID:6156522" /translation="MLRDYRRGLAADARPGRLRWTGTMPRRPSVRSLAAAPLAVLLVL PLAGCGAASTVGGMTTPTDARIYATAADADGRIPAWIPADATDVRIKTSLRGEGAILE FRSATPADRLGCDAAPVDAPAPSVQDTWWPDPSPAAAMTCGDGWLAAADGDAVHAWLP KGSPALDL" misc_feature 592483..592551 /locus_tag="CMS_0563" /old_locus_tag="CMS0563" /note="1 probable transmembrane helix predicted for CMS0563 by TMHMM2.0 at aa 33-55" gene 593080..594043 /locus_tag="CMS_0564" /old_locus_tag="CMS0564" /pseudo /db_xref="GeneID:6156523" misc_feature 593153..593218 /locus_tag="CMS_0564" /old_locus_tag="CMS0564" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 45-66, sequence RPVSHVARELGVSRQCAHRWVA" /pseudo misc_feature 593489..594031 /locus_tag="CMS_0564" /old_locus_tag="CMS0564" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" /pseudo gene 594102..594881 /locus_tag="CMS_0565" /old_locus_tag="CMS0565" /db_xref="GeneID:6156524" CDS 594102..594881 /locus_tag="CMS_0565" /old_locus_tag="CMS0565" /note="ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation" /codon_start=1 /transl_table=11 /product="phosphate transporter ATP-binding protein" /protein_id="YP_001709332.1" /db_xref="GI:170781000" /db_xref="GeneID:6156524" /translation="MSKSIEVNDLNVYYGKFKAVEDVNLRIEPRTVTAFIGPSGCGKS TFLRTLNRMHEVIPGAYVEGEVLVDGNDLYGPGVDPVLVRRQVGMVFQRPNPFPTMSI RDNVLAGVKLNNRKISKSDADALVEQSLQGANLWNEVKDRLALPGSGLSGGQQQRLCI ARAIAVQPDVVLMDEPCSALDPISTLAIEDLIEELKAQYTIVIVTHNMQQASRVSDRT AFFNIAGTGKPGKLIEYDDTTTMFSKPSVQATEDYVSGRFG" misc_feature 594189..594767 /locus_tag="CMS_0565" /old_locus_tag="CMS0565" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.2e-57" misc_feature 594210..594233 /locus_tag="CMS_0565" /old_locus_tag="CMS0565" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 594549..594593 /locus_tag="CMS_0565" /old_locus_tag="CMS0565" /note="PS00211 ABC transporters family signature." gene complement(594961..595800) /locus_tag="CMS_0566" /old_locus_tag="CMS0566" /db_xref="GeneID:6156525" CDS complement(594961..595800) /locus_tag="CMS_0566" /old_locus_tag="CMS0566" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709333.1" /db_xref="GI:170781001" /db_xref="GeneID:6156525" /translation="MLTAAYALGAVDAEEAAEVEALLERDPVLRAEVEELRATAADLA WTTEPVAPSPRLKVDIMAMLDVTPQLPPLAAPSAVTDDARRPAPVTPLRPAASSDAVP DAAVPASSAPRGRLGSASARASERWFRKPGAIIGVAAAAVVLVVGGVVVGTNTGGPDT SQAPVASAYERVTTASDVVIDKRDVVGGGTATVYFSASEAKTAVVLNDASPLPEGRVL QMWYVGASGPVSAGVMPEEDGAGHAVLEGSYTPGDTVAITVEPDGGSEQPTTEPIVAV TST" misc_feature complement(595342..595410) /locus_tag="CMS_0566" /old_locus_tag="CMS0566" /note="1 probable transmembrane helix predicted for CMS0566 by TMHMM2.0 at aa 131-153" gene complement(595821..596423) /locus_tag="CMS_0567" /old_locus_tag="CMS0567" /db_xref="GeneID:6156526" CDS complement(595821..596423) /locus_tag="CMS_0567" /old_locus_tag="CMS0567" /note="Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor SigK" /protein_id="YP_001709334.1" /db_xref="GI:170781002" /db_xref="GeneID:6156526" /translation="MLGLVPSSIERPHLPGPADPESKEALLGRVAQGDRRAFSELYDQ LAPRVLGLVRRLLVDHAQSEEVTQEIFLEIWQSASRFDPAKGAATTWVLTMAHRRAVD RVRASQSSRDRDVRIGIRDHEHGYDQVSETVEISIEHERVTKAMTKLTEIQRQAVSLA YYGGYSHSEVASMLDVPIGTVKTRLRDGMIRLRDEMGVAS" misc_feature complement(595842..595991) /locus_tag="CMS_0567" /old_locus_tag="CMS0567" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 9.7e-15" misc_feature complement(596094..596303) /locus_tag="CMS_0567" /old_locus_tag="CMS0567" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 6.4e-20" gene complement(596988..597620) /locus_tag="CMS_0568" /old_locus_tag="CMS0568" /db_xref="GeneID:6156527" CDS complement(596988..597620) /locus_tag="CMS_0568" /old_locus_tag="CMS0568" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709335.1" /db_xref="GI:170781003" /db_xref="GeneID:6156527" /translation="MSRDYHKPTKFSGAKFESMLGGDDPATISRVAHETASALLACVR ADPDPAVVERLIAYTDEHGIDAVAELWSRASPRSLPGALWRLYLMRALIRQDPDGISL LYQRGTDVATTIDPVVAGATAPTGPAEIVELADSILRGLFTGDFAVALDRAGAFSRLA ALGATSVADDLDATASPERAGDLTTRALRLSQMAADLVQCARLWRGDRLD" gene 597753..597825 /locus_tag="CMS_r040" /old_locus_tag="CMSr040" /db_xref="GeneID:6156528" tRNA 597753..597825 /locus_tag="CMS_r040" /old_locus_tag="CMSr040" /product="tRNA-Lys" /note="codon recognized: AAA; tRNA Lys anticodon TTT, Cove score 76.07" /anticodon=(pos:597786..597788,aa:Lys) /db_xref="GeneID:6156528" gene complement(597764..598843) /locus_tag="CMS_0569" /old_locus_tag="CMS0569" /db_xref="GeneID:6159050" CDS complement(597764..598843) /locus_tag="CMS_0569" /old_locus_tag="CMS0569" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709336.1" /db_xref="GI:170781004" /db_xref="GeneID:6159050" /translation="MAILLVALFHAGLLLMQEDLASPVWATVNSAFVTFRMPIFFLAS GLLAGSAVRRSWAELWNSRIAILVWALAIWSVLRFLYFSVVPLDSRPHEGDPRALLLA FVFPATGLWFLHALAVFLVLAKAAHGRVPPWIQLTGAAVVSALFLSVLRIGSLSWDGM AKYLVFFLIGLHAKDLVFRVASRPRPVAAAAALVAFGAAGVAVELTGISGVPGVLLLV SCLAMAVGVLWAALLARTRLVRPLRFLGRNTLPIYVAHVLVIAAACAVLDAVGFEASG AMPYLLPLVVSVVAIAASLAIHAVAMRTPLRFLLPHAAVPGAGPGRPGVIPSAGIEPA GRSTAVGPVGLEPTTQGLKVPCSTN" misc_feature complement(597920..598840) /locus_tag="CMS_0569" /old_locus_tag="CMS0569" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 2e-05" misc_feature complement(order(597941..598009,598028..598096, 598139..598207,598220..598288,598388..598456, 598475..598543,598601..598669,598688..598756)) /locus_tag="CMS_0569" /old_locus_tag="CMS0569" /note="8 probable transmembrane helices predicted for CMS0569 by TMHMM2.0 at aa 30-52, 59-81, 101-123, 130-152,186-208, 213-235, 250-272 and 279-301" gene 599108..599887 /locus_tag="CMS_0570" /old_locus_tag="CMS0570" /db_xref="GeneID:6156529" CDS 599108..599887 /locus_tag="CMS_0570" /old_locus_tag="CMS0570" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709337.1" /db_xref="GI:170781005" /db_xref="GeneID:6156529" /translation="MGKYGFRERARARSAWRIAGWSAAAVAAACSVALVIAAMGSGAE PVENAGAVAESGYVSGPGTTIAPVAPLDLPEDPAVLMFGDSFILGHGIETSGRPTYPE LLAEREGWSDVRLNAAVGTGFAATSDQPAYPDRLAAMGDDFTPDLVVLQGSVNDIKPG EAAVRSGVTRVLADIAERWPDAQTVIITPMTGVQSYEKLASAYTGPALGKAHVIDATG PESWLPVDRPDLRTEDEWHPSATGHEVIAAGMQTSLAALAD" sig_peptide 599108..599236 /locus_tag="CMS_0570" /old_locus_tag="CMS0570" /note="Signal peptide predicted for CMS0570 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.444 between residues 43 and 44" misc_feature 599165..599197 /locus_tag="CMS_0570" /old_locus_tag="CMS0570" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 599168..599236 /locus_tag="CMS_0570" /old_locus_tag="CMS0570" /note="1 probable transmembrane helix predicted for CMS0570 by TMHMM2.0 at aa 21-43" gene complement(599929..601416) /locus_tag="CMS_0571" /old_locus_tag="CMS0571" /db_xref="GeneID:6156530" CDS complement(599929..601416) /locus_tag="CMS_0571" /old_locus_tag="CMS0571" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709338.1" /db_xref="GI:170781006" /db_xref="GeneID:6156530" /translation="MSYPAWGVRCSGERIDVATAPVSTAHPEGSPLSRSRARAHAPTP DLAAEALAQHAPVPAERPPLVGRRSVFLAAVGATAGAAVVAAPAVAPPASAAVVGDQS RVYYPEQFGFVPSAADHTKAMAAFFAALQKTGGRGILPPCEIRVTSTGIDYSSATWPK QPLSGAPYGYPAISIEGYGRRVTTIRQIAGSTGDVFKVQGKIGADAGPAANNKATVSL TGFSITGTRTGRHGLYLRSLLHCRITDIELNATGGAGVFFARAAFTAASDEYSYANVI EGLRVITAGTWGVDCDGVNAIDIVMRDTEIVNCTAGGIRIASTNARFENTRVIGCGAG NKAARGFVAIPTSNASSMVSELGINGMRLEGNSGAGGYQLEIGAGVGATVVGYNIVTG GDLGAHGIGVGLVDQGGRLAQDTFVGRGTMFMTPSKYPSQRVVVVGAFARDTRVERPS LPNNPDTPFASVVTDRGTRSVDGFGRPLTDPGTGSAPAAAAAPAG" gene complement(601680..602519) /locus_tag="CMS_0572" /old_locus_tag="CMS0572" /db_xref="GeneID:6156531" CDS complement(601680..602519) /locus_tag="CMS_0572" /old_locus_tag="CMS0572" /note="Contains Pfam match to PF01551;Peptidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709339.1" /db_xref="GI:170781007" /db_xref="GeneID:6156531" /translation="MPIRMGEEMEYRDDGDPDEVLDVVTGATRRNILTATVIFAALFG VQTLAPLNAANADPIFNYPFTRRYPVTGRFGEYRPKTKTYHMGTDYGAPTGTPIYAIA YGRVFEKRNSSGYGNHVVIDHVDGFRSVYAHMDQPSPMPEGDSVSAGQYVGPVGNTGA SNGAHLHLEIRINDVKKDPQFWMDNAPLAGDDMAISDSDANKIAQTLRTAEWYTGAPG KPSEVKTVEAIYRGILQTVIGYGGRTENIETMVTNLGTRLANDKTFIDAIATATAAKV KNG" misc_feature complement(601983..602273) /locus_tag="CMS_0572" /old_locus_tag="CMS0572" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 2.2e-37" gene 602692..602949 /locus_tag="CMS_0573" /old_locus_tag="CMS0573" /db_xref="GeneID:6156532" CDS 602692..602949 /locus_tag="CMS_0573" /old_locus_tag="CMS0573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709340.1" /db_xref="GI:170781008" /db_xref="GeneID:6156532" /translation="MLGRMSMQADELVIAMLTAEETSERYDLLKTALEEHDDRGVQYL SGVVGRLLAYIDGLREPEENRIALERYTQRVALQWAQEDEG" gene complement(603028..603198) /locus_tag="CMS_0574" /old_locus_tag="CMS0574" /db_xref="GeneID:6156533" CDS complement(603028..603198) /locus_tag="CMS_0574" /old_locus_tag="CMS0574" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709341.1" /db_xref="GI:170781009" /db_xref="GeneID:6156533" /translation="MTKLKVVILLILALISIPAAHLVPDFAFAFWAVGTVLPILALLL IMRERRRLARER" sig_peptide complement(603028..603114) /locus_tag="CMS_0574" /old_locus_tag="CMS0574" /note="Signal peptide predicted for CMS0574 by SignalP 2.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.612 between residues 29 and 30" misc_feature complement(order(603064..603117,603127..603180)) /locus_tag="CMS_0574" /old_locus_tag="CMS0574" /note="2 probable transmembrane helices predicted for CMS0574 by TMHMM2.0 at aa 7-24 and 28-45" gene complement(603195..603992) /locus_tag="CMS_0575" /old_locus_tag="CMS0575" /db_xref="GeneID:6156534" CDS complement(603195..603992) /locus_tag="CMS_0575" /old_locus_tag="CMS0575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709342.1" /db_xref="GI:170781010" /db_xref="GeneID:6156534" /translation="MEALVPKEIFPRSVIPVTMAGVVLSLMSVVAVIGVVQSGDRPVP VLASPSTVDARAASFDSPVAPTGTVMDKLSQYVGSTTTVSAQDLDQYLVAAGISDVTT SSGRALAVNKADVRKTEAGQFVLHVPFVEAPQQLDISGYTVFLDRDLRVISTGEVLFT ALSPDSGRMQLWQNGVLGLDKVASNDSTAAVDTDRSNIANADFNWDTLNQCLLNAGIS QWVITIIGTGCALLCGATLGTGCVACIVGFAGVAGGTVGTCVGLAMS" sig_peptide complement(603195..603335) /locus_tag="CMS_0575" /old_locus_tag="CMS0575" /note="Signal peptide predicted for CMS0575 by SignalP 2.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.502 between residues 47 and 48" misc_feature complement(order(603201..603269,603288..603347, 603888..603956)) /locus_tag="CMS_0575" /old_locus_tag="CMS0575" /note="3 probable transmembrane helices predicted for CMS0575 by TMHMM2.0 at aa 13-35, 216-235 and 242-264" gene 604171..604422 /locus_tag="CMS_0576" /old_locus_tag="CMS0576" /db_xref="GeneID:6156535" CDS 604171..604422 /locus_tag="CMS_0576" /old_locus_tag="CMS0576" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709343.1" /db_xref="GI:170781011" /db_xref="GeneID:6156535" /translation="MMASAGSVMDSIVTACAPWTSERYDLLKTALEEHDDRGVQYLSG VVGRLLAYIDGLREPEENRIALERYTQRVALQWAQEDEG" gene complement(604503..605558) /locus_tag="CMS_0577" /old_locus_tag="CMS0577" /db_xref="GeneID:6156536" CDS complement(604503..605558) /locus_tag="CMS_0577" /old_locus_tag="CMS0577" /codon_start=1 /transl_table=11 /product="putative calcium-binding exported protein" /protein_id="YP_001709344.1" /db_xref="GI:170781012" /db_xref="GeneID:6156536" /translation="MRVITQPKEMMRPLPLVTAALLAVSLLLPAQAASASVEPVPTPA PTAEPTPTPVPTTAPTPTPVPPKDQGRWQLYTTSFDGRIYELVNDQSPRALSFETWRD VYDFRVPGASPTDYVKYPWSSTVYAVTFWPGGEGAWQWTRLDYGQFVKAGSPAVRNAG YIVNSYVYKWGTSAEILVEGEDKVNHKLTGAEWRAMDFRPFNDRANEGFMKLSWTSDI VRMTDVRGGQGRAIGYGEWQEEAFPTPQVVQRINGDQFYRYSNSNQVWYAGPGMNRVV SLAEFRAAGSPAPRVIQVAGQSTPPPSSGGGGGGGNVFYANCDAVKRAGKAPLYAGQP GYSFDLDGDRDGVACER" sig_peptide complement(604503..604676) /locus_tag="CMS_0577" /old_locus_tag="CMS0577" /note="Signal peptide predicted for CMS0577 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.374 between residues 58 and 59" misc_feature complement(604509..604619) /locus_tag="CMS_0577" /old_locus_tag="CMS0577" /inference="protein motif:HMMPfam:PF05901" /note="HMMPfam hit to PF05901, Excalibur, score 4.8e-10" misc_feature complement(605454..605522) /locus_tag="CMS_0577" /old_locus_tag="CMS0577" /note="1 probable transmembrane helix predicted for CMS0577 by TMHMM2.0 at aa 13-35" gene complement(605638..606600) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /db_xref="GeneID:6156537" CDS complement(605638..606600) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /note="Nu/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709345.1" /db_xref="GI:170781013" /db_xref="GeneID:6156537" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GIPRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(605650..606192) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 8e-39" misc_feature complement(606277..606342) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(606342..606463) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(606463..606528) /locus_tag="CMS_0578" /old_locus_tag="CMS0578" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(606698..607618) /locus_tag="CMS_0579" /old_locus_tag="CMS0579" /db_xref="GeneID:6156538" CDS complement(606698..607618) /locus_tag="CMS_0579" /old_locus_tag="CMS0579" /codon_start=1 /transl_table=11 /product="putative epimerase" /protein_id="YP_001709346.1" /db_xref="GI:170781014" /db_xref="GeneID:6156538" /translation="MRPVTGEQHHLVHAGPSGELRATVVQLAAAIRGLTLDGVDLVEP YGEDVVAPMGAGMVLVPWPNRIRGARYELDGKAQALDASEPSLGNASHGLLRNTGYAA SDRADDRVTLSATVFPQHGYPFLLDTSVTYRLSDDGLVVTHRLRNDSAAAAPVAVGAH PYLAIGGVPSSDLTLTVRADTWSEVDDALIPVTDHPVDGAAEDLRAGRVVGDLDLNTG YGNVHVEGGTSRHGLTAPDGRGVELWADASFRFLQVYTPREFPTHGRQAVAIEPMTAP ADAFNSGIGVRRLAPGEEWTLSWGIRATGF" misc_feature complement(606713..607588) /locus_tag="CMS_0579" /old_locus_tag="CMS0579" /inference="protein motif:HMMPfam:PF01263" /note="HMMPfam hit to PF01263, Aldose 1-epimerase, score 8.5e-37" gene complement(607629..608459) /locus_tag="CMS_0580" /old_locus_tag="CMS0580" /db_xref="GeneID:6156539" CDS complement(607629..608459) /locus_tag="CMS_0580" /old_locus_tag="CMS0580" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001709347.1" /db_xref="GI:170781015" /db_xref="GeneID:6156539" /translation="MADDSAPVPAATRRSRILERLADRGFATVAELAADAGVSAVTIR ADLDALADSAAVQRVHGGAVLRAGLGAREQSLEVTLESAADAKRAIGRAAADLVESGQ SVLLDVGSTTLQVARALVARDDLVDVTVITNGLTLALELERAMPRFTVVVTGGTLRAL QHSLVDPLATVVLDRLHPDVAFIGCNGIDVDRGVTNVNLPEAEVKRRMVDASARTIVV ADGSKAGRTHLGSVAPLDRIDMLLTDADADADPRELGRLRDSGLRVVQAGGSPGAARP" misc_feature complement(607728..608423) /locus_tag="CMS_0580" /old_locus_tag="CMS0580" /inference="protein motif:HMMPfam:PF00455" /note="HMMPfam hit to PF00455, Bacterial regulatory protein, DeoR, score 5.4e-64" misc_feature complement(608319..608423) /locus_tag="CMS_0580" /old_locus_tag="CMS0580" /note="PS00894 Bacterial regulatory proteins, deoR family signature." gene 608553..609695 /locus_tag="CMS_0581" /old_locus_tag="CMS0581" /db_xref="GeneID:6156540" CDS 608553..609695 /locus_tag="CMS_0581" /old_locus_tag="CMS0581" /codon_start=1 /transl_table=11 /product="galactose-1-phosphate uridylyltransferase" /protein_id="YP_001709348.1" /db_xref="GI:170781016" /db_xref="GeneID:6156540" /translation="MHADQTVTTSPSGITQRRTLLSDGRELVYFDDADTTLPPERAAD ARPAAPRPPTATMRQDVLTGEWVSIAAARQNRAHLPPAELDPLAPASATNPSEIPSMY DVAVFENKSPSFGPSLADSPDVDAAVDDDDLTRIDLGRTRTSVGRCEVVCFSPEHTGS FSGLTPSRARTVVEAWAERTRALSAMPGIRQVFPFENRGEAIGVTLHHPHGQIYSYPY VTPRTRRLVESIERFGPGLFQRILETEQASERVVLRGEHFTAFVPFAARWPVEVHMLP HRHVPDLAETTEAERAELATMYLKLLRGIDRLYDTPTPYISAWHQAPVDAHRDEIRLM LQITSPRRAADKLKFLAGSEAAMGAWIGDVPPEKAAENIRKAVEDA" misc_feature 608595..609212 /locus_tag="CMS_0581" /old_locus_tag="CMS0581" /inference="protein motif:HMMPfam:PF01087" /note="HMMPfam hit to PF01087, Galactose-1-phosphate uridyl transferase, N-terminal, score 4.7e-11" misc_feature 609135..609188 /locus_tag="CMS_0581" /old_locus_tag="CMS0581" /note="PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature." misc_feature 609216..609689 /locus_tag="CMS_0581" /old_locus_tag="CMS0581" /inference="protein motif:HMMPfam:PF02744" /note="HMMPfam hit to PF02744, Galactose-1-phosphate uridyl transferase, C-terminal, score 1.2e-08" gene 609692..610852 /locus_tag="CMS_0582" /old_locus_tag="CMS0582" /db_xref="GeneID:6156541" CDS 609692..610852 /locus_tag="CMS_0582" /old_locus_tag="CMS0582" /codon_start=1 /transl_table=11 /product="galactokinase" /protein_id="YP_001709349.1" /db_xref="GI:170781017" /db_xref="GeneID:6156541" /translation="MTDIRDDVREGFRARFEREPHGVWSSPGRVNLIGEHTDYNEGFV FPFAIDRRTVIALAPRDDDRIRLASSFSDEVVEARLADLTGERIDGWQAYPLGVAWAL GQRGADLAAVPGFDVFIDSDVPVGAGLSSSAALEGSIALALDDIWRLGLDRPTLAAVG QLAENEIVGAPTGIMDQSASLLGRQDAGVFLDCRSLDAEVIPLGLEAAGLTIAVIDTH VAHAHADGGYRARRESCEKGARLLGVSSLRDVAVDDLVRAREVLDDETFRRVRHIVTE NQRVLDTVRALREEGPRAIGELLDASHRSMRDDFEISVPELDLAVEVAQNEGAIGARM TGGGFGGSAIALIDADSLSRLQVAIDGAFAEHGYTGPTVFTVTPSDGAKAEQ" misc_feature 609773..609808 /locus_tag="CMS_0582" /old_locus_tag="CMS0582" /note="PS00106 Galactokinase signature." misc_feature 610031..610738 /locus_tag="CMS_0582" /old_locus_tag="CMS0582" /inference="protein motif:HMMPfam:PF00288" /note="HMMPfam hit to PF00288, GHMP kinase, score 2.2e-41" misc_feature 610058..610093 /locus_tag="CMS_0582" /old_locus_tag="CMS0582" /note="PS00627 GHMP kinases putative ATP-binding domain." gene 610873..611814 /locus_tag="CMS_0583" /old_locus_tag="CMS0583" /db_xref="GeneID:6156542" CDS 610873..611814 /locus_tag="CMS_0583" /old_locus_tag="CMS0583" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709350.1" /db_xref="GI:170781018" /db_xref="GeneID:6156542" /translation="MGTPADVVTELADDPDAVREIGRALSAWFPASTHPGGFAWEAST GQLPERMAVVRDGAGALIGWAAFSTDDARVECAPDDDATTDLLAAWILDAAGEGRTSV AVHRGQGRLRGILADRGFADEAIPLAGLRHPARDTGARPPAEYRIRPVAEGEEQAKVD AHRRAWKPVELPFTDGSGDGIDPDAESPFDADDYAAMRAAPVYRRELDLVVEAPDGSL AGTCTAWLDEASGWAELEPLGIVPEHRRRGLAQTLALDVCRRVGELGGHDVFINASPL PYYRAPWDAYVAAAFVPMERGTRMRPRARSARPTLAA" misc_feature 611500..611748 /locus_tag="CMS_0583" /old_locus_tag="CMS0583" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 9.2e-05" gene 611811..612410 /locus_tag="CMS_0584" /old_locus_tag="CMS0584" /db_xref="GeneID:6156543" CDS 611811..612410 /locus_tag="CMS_0584" /old_locus_tag="CMS0584" /codon_start=1 /transl_table=11 /product="putative siderophore binding protein" /protein_id="YP_001709351.1" /db_xref="GI:170781019" /db_xref="GeneID:6156543" /translation="MTVDPQATVRALPGSPAPDIAPDALVAAGARVVGRVTLAAGSSV WFNAVLRAEAADIRIGARSNLQDNVSCHVDAGFPLTVGEGVSVGHNAVLHGCTIQDGC IVGMSATVMNGAVVGRESLLAGGTVVLEGQSIPPRSLVAGVPGKVRRELTDEEVAGLR INADQYVENARLHAGAIPTPAVLLGTESATGPAREEGTA" misc_feature 611877..611930 /locus_tag="CMS_0584" /old_locus_tag="CMS0584" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 33" misc_feature 612042..612095 /locus_tag="CMS_0584" /old_locus_tag="CMS0584" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 11" misc_feature 612111..612164 /locus_tag="CMS_0584" /old_locus_tag="CMS0584" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 0.69" gene complement(612474..613376) /locus_tag="CMS_0585" /old_locus_tag="CMS0585" /db_xref="GeneID:6156544" CDS complement(612474..613376) /locus_tag="CMS_0585" /old_locus_tag="CMS0585" /note="catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate" /codon_start=1 /transl_table=11 /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /protein_id="YP_001709352.1" /db_xref="GI:170781020" /db_xref="GeneID:6156544" /translation="MTAVVLDGVATASAVKSELAVRIRALREQGLVPGLGTLLVGDDP GSRSYVAGKHRDCAEVGIESIRVDLPADATEADVRTAIERLNSDPAVTGYIVQLPLPA GIDENAMLELIDPSKDADGLHPTNLGRLVLGVQGELTSPLPCTPAGIVEMLQRYDVPI AGQHVVVVGRGLTVGRPLGLLLTRKGLDATVTLTHSRTRDIEQEVRRADIVVAAVGAA HLVKPEWVKPGAAVLDVGITRVVDPETGKARLTGDVDPAVAEVAGHLSPNPRGVGPMT RAMLLANVVQAAERDARLAAELRG" misc_feature complement(612501..613013) /locus_tag="CMS_0585" /old_locus_tag="CMS0585" /inference="protein motif:HMMPfam:PF02882" /note="HMMPfam hit to PF02882, Tetrahydrofolate dehydrogenase/cyclohydrolase, score 2.2e-84" misc_feature complement(613017..613367) /locus_tag="CMS_0585" /old_locus_tag="CMS0585" /inference="protein motif:HMMPfam:PF00763" /note="HMMPfam hit to PF00763, Tetrahydrofolate dehydrogenase/cyclohydrolase, score 3.3e-49" gene complement(613373..614707) /gene="glyA" /locus_tag="CMS_0586" /old_locus_tag="CMS0586" /db_xref="GeneID:6156545" CDS complement(613373..614707) /gene="glyA" /locus_tag="CMS_0586" /old_locus_tag="CMS0586" /note="catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="YP_001709353.1" /db_xref="GI:170781021" /db_xref="GeneID:6156545" /translation="MAVRLGHDASSRPPCSRSPMPVDQSFNAPLSEVDPEIAAVLEQE LGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAEGYPGRRYYGGCEFVDVAEQLAID RAKSLFGAEFANVQPHSGATANAAVLAAIAQPGDTILGLELAHGGHLTHGMKLNFSGK LYDAAAYGVDPDTFLIDMDVVREKALEHRPQVIIAGWSAYPRHLDFAAFRSIADEVGA KLWVDMAHFAGLVAAGVHPSPVPYADVVSSTVHKTLAGPRSGVILSRDTALAKKLNSA VFPGQQGGPLMHVIAAKATAFKIAATEEFADRQRRTIQGAQILAERLVAADSTEAGVS VLTGGTDVHLVLADLRNSPIDGKQAEDALHEVGITVNRNSVPFDPRPPMVTSGVRIGT SALATRGFGETEFTEVADIIAETLKPGSDLAALRARVLTLTDGFPLYEGLTQ" misc_feature complement(613472..614620) /gene="glyA" /locus_tag="CMS_0586" /old_locus_tag="CMS0586" /inference="protein motif:HMMPfam:PF00464" /note="HMMPfam hit to PF00464, Glycine hydroxymethyltransferase, score 1.9e-225" gene 615097..616584 /locus_tag="CMS_0587" /old_locus_tag="CMS0587" /db_xref="GeneID:6156546" CDS 615097..616584 /locus_tag="CMS_0587" /old_locus_tag="CMS0587" /codon_start=1 /transl_table=11 /product="putative amylosucrase" /protein_id="YP_001709354.1" /db_xref="GI:170781022" /db_xref="GeneID:6156546" /translation="MGDDADALADALAANLQDVRPRRTPALGSPDDLHLDLRAGGVCY VDRYADDLRGLAARIPALRDLGLTHLQITPVTERADDADADADALLAPGVRVRAELGS AADLAALADALHDAGLTLAVDLSPVDADAPLADRIRSAVREAVALAAAGADVVRVDPA AVIGERPDAERAALLRVIASAGRRVAPALALAVAADADPRGAAELLDGDAVRLADDPA LTALVWEALATRSAAPLSRALVRRGDVPAGSARTARVRSHDALRFAFDDDDARALGID PDEHRRFLADYHVGRFPGSHARGIWHPDGAVAGTTASLAGLEQDDPGAVERILLAHSI ALSTGGLPLLVLGDEVGQLNDYGYDDVPAHADDSRWVNRPLYPFERYDQRDDRTTSTG VIHAGVRRLLAVRRATPALGGTRVVGFDANDPHVLGYQRPHDDGTVLVLANLGDEPAT VSAETLGGFAEHAVDLVRDERLRLTKGVVLSPRTFVWLQAAHDLA" gene 616625..617128 /locus_tag="CMS_0588" /old_locus_tag="CMS0588" /db_xref="GeneID:6156547" CDS 616625..617128 /locus_tag="CMS_0588" /old_locus_tag="CMS0588" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709355.1" /db_xref="GI:170781023" /db_xref="GeneID:6156547" /translation="MSDEGRGTHEPPEGARAASGFAWPMWVNIGWIALGAWHVLAPVN DASGWLGMFQIAVGAFGIIASRRRARRLAEAEAAALPLEEATRVPADVDEERARLDEA AAAHAEMDARLRALAMQLEQPGDPTADPDKPEPPHQPTGRGRGRGRKGRAREAWPDDD LPPVARW" misc_feature order(616679..616747,616760..616819) /locus_tag="CMS_0588" /old_locus_tag="CMS0588" /note="2 probable transmembrane helices predicted for CMS0588 by TMHMM2.0 at aa 19-41 and 46-65" gene complement(617154..618011) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /db_xref="GeneID:6156548" CDS complement(617154..618011) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_001709356.1" /db_xref="GI:170781024" /db_xref="GeneID:6156548" /translation="MLDPTLLATFLAVADTRSFTQAAARLGISQPTVSQQVRRLERAV DRTLIARDTRAMRLTDAGDAMAGFARTILAAHRAAESYFGGSEVSGRLRFGTADDLAI TQLPRILRHFRQLHPQIELELTVTQSGPLHRRLLAGQLDLILTKTTVDEQPSARLVGR DRMVWVGLERTLVEAGATVPLIAYRAPSISRQMAMDALERAGRTWRITCSTRDVNGVL AAVRAGMGVAVLPQALIPTDLVKVTSRLGLPELDEVDYVLMDNPAGPRASIEALTSAI MSRGVTRAS" misc_feature complement(617169..617759) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 1.4e-31" misc_feature complement(617823..618002) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 7e-20" misc_feature complement(617868..617960) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /note="PS00044 Bacterial regulatory proteins, lysR family signature." misc_feature complement(617898..617963) /locus_tag="CMS_0589" /old_locus_tag="CMS0589" /note="Predicted helix-turn-helix motif with score 2278.000, SD 6.95 at aa 17-38, sequence RSFTQAAARLGISQPTVSQQVR" gene 618168..619634 /locus_tag="CMS_0590" /old_locus_tag="CMS0590" /db_xref="GeneID:6156549" CDS 618168..619634 /locus_tag="CMS_0590" /old_locus_tag="CMS0590" /note="GC Frameplot suggests that an earlier stop codon has been lost." /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709357.1" /db_xref="GI:170781025" /db_xref="GeneID:6156549" /translation="MTPPNAFPPTAPLPTQTQRPPWRHTLIALSVPNFRRFTASNVIA MTSGWMQRIAQDWLVLELTGSVTAVGITVAMQFAPMLLFGLLGGVIVDRCSKRMLMMI TQGTYALLSALLAVLTLSGAVEAWHIFAIAFATGLVTVIDNPARQVFVTEIVGQKHLR NAISVNSSVFQLGGMVGPALSGILLLAVGAGWSFAINALACVVVVLTLWSLKTRDLTR IPPAPRRRGQLAEGLRYARSKPTILWPVVLVAVFSVFGLTMPVLLAAFASQVYDVGAG GYGFFNSMVAIGALTGALLSTRRATVRLRTIVVGVGIMGLLQAAAGLMPGIAPFAAVL VTVGMASLLFQTAANSLVQLSSNVAIRGRVMSVYVLVLLGGQAVGGPLMGGIVEAWGV HVGMVLSGGVPALAAAVVAVILARRGQLTLEVVVRRHVPRVRITPRAPGAGRPRVAGA DEGTTGGGLSRARRSRGGAAARRPGRTGSRTPRVRSPR" misc_feature 618234..619631 /locus_tag="CMS_0590" /old_locus_tag="CMS0590" /inference="protein motif:HMMPfam:PF05977" /note="HMMPfam hit to PF05977, Bacterial protein of unknown function DUF894, score 2.4e-09" misc_feature 618276..619331 /locus_tag="CMS_0590" /old_locus_tag="CMS0590" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature order(618372..618440,618501..618569,618714..618782, 618894..618962,618990..619058,619077..619145, 619155..619223,619260..619328,619341..619409) /locus_tag="CMS_0590" /old_locus_tag="CMS0590" /note="9 probable transmembrane helices predicted for tmhmm2embl_unknown_000001_618168_619634 by TMHMM2.0 at aa 69-91, 112-134, 183-205, 243-265, 275-297, 304-326,330-352, 365-387 and 392-414" gene complement(619543..620574) /locus_tag="CMS_0591" /old_locus_tag="CMS0591" /db_xref="GeneID:6156550" CDS complement(619543..620574) /locus_tag="CMS_0591" /old_locus_tag="CMS0591" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709358.1" /db_xref="GI:170781026" /db_xref="GeneID:6156550" /translation="MQYRTLGNSGAIVSTYALGTMTFGAEADEETSGRILEAYVAGGG TFIDTADVYTSGVSEEIVGRWLKAHPAEADQLVVATKGRFPMGQGNNDVGTSRRHMTR ALDDSLRRLGVDTIDLYQMHAWDAVTPLEETLRFLDDAVRAGKISYYGFSNYLGWQLT KAVGLAKALGYTPPVTLQPQYSLPVREIESEIVPALRDAGIGLLPWSPLAGGWLTGKY RRDETPTGATRLGEDPERGMEAFTPRNGQERTWAILDEVRRIAEAHGSSSARVSLAWL EAQPAVTSVILGARTVEQLEDNMASADLELTADEIASLSAVSAPVVSDYPYGPAGVQQ RHRAIDVRG" sig_peptide complement(619543..619623) /locus_tag="CMS_0591" /old_locus_tag="CMS0591" /note="Signal peptide predicted for CMS0591 by SignalP 2.0 HMM (Signal peptide probability 0.915) with cleavage site probability 0.722 between residues 27 and 28" misc_feature complement(619618..620556) /locus_tag="CMS_0591" /old_locus_tag="CMS0591" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 1.1e-58" gene 620703..621386 /gene="sirR" /locus_tag="CMS_0592" /old_locus_tag="CMS0592" /db_xref="GeneID:6156551" CDS 620703..621386 /gene="sirR" /locus_tag="CMS_0592" /old_locus_tag="CMS0592" /codon_start=1 /transl_table=11 /product="putative metal-dependent transcriptional regulator" /protein_id="YP_001709359.1" /db_xref="GI:170781027" /db_xref="GeneID:6156551" /translation="MSVDELSSAAQDYLKLIWSATEWTDQPMTVSRLAERLGIRPATA SDGIRRLTAQGLVEHRPYGSIELTEDGRRHAIQMVRRHRLLETFLVDVLGYGWDEVHD EAEVLEHAVSDDFVARIDAHLGHPSRDPHGDPIPSADGEPHLPVATVLADAVADRPMR VRRISDEDPRLLRELAEHGIGLDATLVREAADTGSRDAAAMVVTVDGSARRPLTAAAA SAVWVSEAG" misc_feature 620715..620900 /gene="sirR" /locus_tag="CMS_0592" /old_locus_tag="CMS0592" /inference="protein motif:HMMPfam:PF01325" /note="HMMPfam hit to PF01325, Iron dependent repressor,score 2.3e-19" misc_feature 620784..620849 /gene="sirR" /locus_tag="CMS_0592" /old_locus_tag="CMS0592" /note="Predicted helix-turn-helix motif with score 1168.000, SD 3.17 at aa 28-49, sequence MTVSRLAERLGIRPATASDGIR" misc_feature 620904..621116 /gene="sirR" /locus_tag="CMS_0592" /old_locus_tag="CMS0592" /inference="protein motif:HMMPfam:PF02742" /note="HMMPfam hit to PF02742, Iron dependent repressor,score 6.1e-35" gene complement(621424..622674) /locus_tag="CMS_0593" /old_locus_tag="CMS0593" /db_xref="GeneID:6158991" CDS complement(621424..622674) /locus_tag="CMS_0593" /old_locus_tag="CMS0593" /codon_start=1 /transl_table=11 /product="putative manganese transport protein" /protein_id="YP_001709360.1" /db_xref="GI:170781028" /db_xref="GeneID:6158991" /translation="MTRTAPERRRARRPVTGPRLVLLLGPAFVAAIAYVDPGNVAANL TAGARYGYLLVWVLVAANLIAVLVQYQSAKLGLVTGRSLPELLGQRLPTQRRRAFWVQ AELIAAATDLAEVIGGAIALHLLFRIPLVAGGVIVGLVSIGLLAVQSRHGQRPFELVI GALLLVITVGFLTGLVVSPLSGSGIAGGLVPRFDGPDSVLLAASMLGATVMPHAVYLH SSLSRDRHGVQTDDGVLRRLLRATRWDVVTALAVAGAVNISMLLIAAASLGGVPGTDS IEGAHAAITASLGPVVGVVFAVGLLASGLASTSVGAYAGAAIMGGLLHVRVPLLARRV VTLIPALAILAIGVDPTTALVVSQVVLSLGIPFALVPLIRLTGDRRVMGAHVDRPLTR IAAWVAVSLVVVLNVALVVLTFTG" sig_peptide complement(621424..621549) /locus_tag="CMS_0593" /old_locus_tag="CMS0593" /note="Signal peptide predicted for CMS0593 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.417 between residues 42 and 43" misc_feature complement(order(621430..621498,621556..621624, 621637..621690,621760..621828,621871..621939, 622024..622083,622141..622209,622234..622302, 622312..622380,622471..622539,622549..622617)) /locus_tag="CMS_0593" /old_locus_tag="CMS0593" /note="11 probable transmembrane helices predicted for CMS0593 by TMHMM2.0 at aa 20-42, 46-68, 99-121, 125-147,156-178, 198-217, 246-268, 283-305, 329-346, 351-373 and 393-415" misc_feature complement(621508..622557) /locus_tag="CMS_0593" /old_locus_tag="CMS0593" /inference="protein motif:HMMPfam:PF01566" /note="HMMPfam hit to PF01566, Natural resistance-associated macrophage protein, score 8.6e-136" gene complement(622887..623816) /locus_tag="CMS_0594" /old_locus_tag="CMS0594" /db_xref="GeneID:6156552" CDS complement(622887..623816) /locus_tag="CMS_0594" /old_locus_tag="CMS0594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709361.1" /db_xref="GI:170781029" /db_xref="GeneID:6156552" /translation="MDAVTTTPAPLGLLLDVDGPIASPITRTLAIPSIATDLVELAAA GVPIVFNTGRSDAFIREQVLGPLLAAGLPAGARVHAVCEKGASWFSITPEGAGEVHVD RALALPEAYMRDMERLVAERFADWMFFDATKHAMVSLEQLTSVSSDDYLRVQPELDAR AVEMLTSHGLGSVLEGVEVPDADGNVQVRVDPTIISTDIESIRLGKDLGAERALELLA DSGPLPLRWRTVGDSRTDYAMARWLHENGHEVAHVDVRPADGIPATPYDVLTAGDLIH DEAGAALLAQWVRIVRGETDDDSAFLAPGRSAS" gene complement(623960..625273) /locus_tag="CMS_0595" /old_locus_tag="CMS0595" /db_xref="GeneID:6156553" CDS complement(623960..625273) /locus_tag="CMS_0595" /old_locus_tag="CMS0595" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709362.1" /db_xref="GI:170781030" /db_xref="GeneID:6156553" /translation="MTNTSPIFLPDLERAERSERSGRRRPPPGVDPSFRFPWVGILTL AACVFLSVTSEMLPTGLLSEMSGDLGVEESRVGLLVSVFAVAVVVSSAPLAALTRRVP RHALLLAVLAVFATSNLLTALAPTFELVTATRVLGGLAHGLFWAVVGAYSAHLVPPAL IGRAVALTVGGGSLAFVLGVPVGTAAGQAFGWRAAFAGIGVLTLLGIVLVWRFLPAVG RPEREAPAAASATGRVGFRQRMAGQGLGGVLFVCLTAMVIMIGQYGFYTYVDPFVTRV MGIPEQQLSAMLFGYGIAGAVGLLLAGTLFSSRPQLGVLAGLAAAALGVSSLALVPGL WAVAIPGFLLWGLAFGAIPTLLQTRMLHAAHPSFRDTASSFYTTAFNVGIGGGALVGG ALLDGLGIASLPGAFLAVMAVSVVLVVGSAGRAVRARAASARAAG" misc_feature complement(623984..625162) /locus_tag="CMS_0595" /old_locus_tag="CMS0595" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 0.00019" misc_feature complement(order(624008..624076,624089..624157, 624206..624274,624284..624337,624356..624424, 624467..624535,624632..624700,624728..624796, 624815..624883,624893..624961,624980..625048, 625106..625174)) /locus_tag="CMS_0595" /old_locus_tag="CMS0595" /note="12 probable transmembrane helices predicted for CMS0595 by TMHMM2.0 at aa 34-56, 76-98, 105-127, 131-153,160-182, 192-214, 247-269, 284-306, 313-330, 334-356,373-395 and 400-422" misc_feature complement(624086..625144) /locus_tag="CMS_0595" /old_locus_tag="CMS0595" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 625426..626223 /locus_tag="CMS_0596" /old_locus_tag="CMS0596" /db_xref="GeneID:6156554" CDS 625426..626223 /locus_tag="CMS_0596" /old_locus_tag="CMS0596" /codon_start=1 /transl_table=11 /product="putative formyltetrahydrofolate deformylase" /protein_id="YP_001709363.1" /db_xref="GI:170781031" /db_xref="GeneID:6156554" /translation="MHAIAGAIVEAGGDITESQQFSSADTGRFFMRLQIQSAADDDRL ADVLAAVVERYDATWHLDEVGRPLRTLVLGSTAEHCVNDLLFRQRAGQLPVEIPLVLS NHGKLADLAGFYGVPFEHVPVTDEASKQAFEERVIRAVEEHDIELVVLARYMQILSPG LCARLSGRIINIHHSFLPGFKGANPYKQAHARGVKLIGATAHFVTSDLDEGPIVEQNV VRVDHSRSARELMAIGQDEESRTLTQAVRWFAEHRVLLDGARTIIFR" misc_feature 625627..626163 /locus_tag="CMS_0596" /old_locus_tag="CMS0596" /inference="protein motif:HMMPfam:PF00551" /note="HMMPfam hit to PF00551, Formyl transferase,N-terminal, score 8.6e-35" gene complement(626326..629943) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /db_xref="GeneID:6156555" CDS complement(626326..629943) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /note="Tandem duplication indicated by similarity to upstream CDS." /codon_start=1 /transl_table=11 /product="putative secreted peptidase" /protein_id="YP_001709364.1" /db_xref="GI:170781032" /db_xref="GeneID:6156555" /translation="MFVIPRSPRLRPESDRAPSLRRATASVAATALVAAGLVTFGAAG AMAAPAPTVATPASALEDGRYIVTLADDAAATYRGGVDGLPATEARSGAQLDAKAGPV VAYTDYLEDRQEDVAASVGADIEYSYSLTVNGFSADLTAEQASKLSGDRAVASVEPER LYHPTSTPAADFLGLTGPDGVWAKTGGQEEAGEGAVIGVIDTGIAPENPAFVGEPLGT TAGAEPYRDGSAIAYAKGDGTTFRGTCQTGEQFTAADCSTKIVGARYYVTGFGQENIG TAATGEYDSPRDGEGHGSHTASTAAGEAGVTATIDGKDLGEISGVAPASKIAAYKVCW SGPDPAVKTDDGCAGADLIAAIEQATADGVDVINYSIGGGSAATTFSATDRAFLGAAS AGIFVSASAGNSGPGASTLDNASPWITTVAASTVAGNFEATAKLGDGQAFAGSSITVT EPVTGDFVTAASVAVAGATTPALCGPGVLDPAKTAGKIVLCERGTIDRVAKSAEVERA GGIGMVLVNPTPNSIDADTHSVPTVHLDADVYAAVSAYAATPGATVTLVPDNTTGVSA PTPQVAGFSSRGPVLADGSDILKPDVTAPGVSIIAATNNAEGEEPTLALLSGTSMAAP HVASLALLYLGEHPKATPAEIKSAMMTTAYDTLDEDGGKVTDPFTQGAGHVDARRYLD PGLLYLNDRADWLAYLAATGYASGIDPVDPSELNLASIAIGALTGSETVTREVTSTRA GTYTASVQGLAGVSAEVTPKTLEFTEAGQTKSYEVSFTRTTADIDAYATGSLTWTDGG TTVRSPIAVNPVSIAAPDEVQGKGIRGSVDVTVTPGTTGPIALTAEGLTAGRVYANPD DASPPISGTGPAKAELQYATTVPAGQIATRIDLDSADDKADLDLSVFRLEGGKPVEQF DSATESADESVTIETPEAGDYVVVVSVFSVPAGQKTQDFTLTQFDLSESTDEGAFTVS PNPLDAVQSRPVTYTASWSGLAPETAYLGRVAYSGTESSTYVRIESGAIPAPTATAPP VISGTPVAGQTLTATPGTWDQEGLKYSYQWYADGKALAGQTRATYKVSPSVAGKSITV VVTAKPATGPSGTATSEAVVIKLASTVTVSVKPPVLTSAQKAVVTVKVDSTAKAAPTG TVTVKVGSDSYEVALDASGTGRVELPSYAKGRYAVTATYAGDTANAAKTSAPKYLYVS R" sig_peptide complement(626326..626502) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /note="Signal peptide predicted for CMS0597 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.615 between residues 59 and 60" misc_feature complement(627952..629400) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /inference="protein motif:HMMPfam:PF00082" /note="HMMPfam hit to PF00082, Peptidase S8 and S53,subtilisin, kexin, sedolisin, score 2.1e-11" misc_feature complement(628303..628602) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /inference="protein motif:HMMPfam:PF02225" /note="HMMPfam hit to PF02225, Protease-associated PA,score 5e-21" misc_feature complement(629320..629355) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /note="PS00136 Serine proteases, subtilase family,aspartic acid active site." misc_feature complement(629449..629757) /locus_tag="CMS_0597" /old_locus_tag="CMS0597" /inference="protein motif:HMMPfam:PF05922" /note="HMMPfam hit to PF05922, Proteinase inhibitor I9,subtilisin propeptide, score 3.6e-07" gene complement(630254..633853) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /db_xref="GeneID:6156556" CDS complement(630254..633853) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /note="Tandem duplication indicated by similarity to downstream CDS." /codon_start=1 /transl_table=11 /product="putative secreted peptidase" /protein_id="YP_001709365.1" /db_xref="GI:170781033" /db_xref="GeneID:6156556" /translation="MPIHRDPLMPDRRRRLRAGRPLAACALAFALVAAGTTTASAADT PTAAVPVGAGDGNYLVTLRDQPASAYDGTLDGLAPTRVEPGARLDAQSDAVQRYSDHL TQRQDSAADAAGVTPTNRYSLTVNGFSAKLTAAQVQELSHDRDVLSVEPDQALHTTST PDSRFLGLEGDHGLWSKAGGVDAAGKGTVIGVLDTGIAPDNPSFAGKPLGSTPGADPY LDGSRIDFRKGDGTVFHGTCQTGDGFTADDCSTKIVGARAFEAGWAATGSPIGPQEKV SPLDTAGHGSHTTSTAAGDAGVTATTGAVQEAIAGIAPAARIAAYKVCWSGPDPEVET DDGCATSDIVAGIEQATSDGVDVINMSLGGAGKAEDTFQRALLGAADAGIFVAAAGGN SGPDAGTVSNTEPWITTVAASSVPDNYSGTVTLGDGASFSGASVTVGSTVSGPLVRAA DSGVAGAASPELCGDGTLDPDKVRGRIVQCDRGVSARIDKSAEVERAGGIGMVLTNVK PDSEDLDAHSVPTVHLDVDSRQTIVDYAAKAGATATLTNGNTTGVTRPAPQVAGFSSR GAAEAVDGGDTIKPDITAPGVGILAAVSDKGGKPDFAADSGTSMASPHIAGFALVYLG VHPKASPAEVKSALMTTATDTVDAKGEPATDPFAQGAGQIAPDRFLQPGLFYPSGAKD WAAYAAATGLELPNPVAPVAPSQLNLPSIGVGKLLGSTTVTRTVTSLTAGTWTASVQG VPQADVKVTPARLTFTAPGQTKSFQVRITAKRGAPSDAWSTGSLTWTGSAGTVRSPIA VRPTAVVAPASVDGTGTSGKVDVSVDAGITGRIPLTTAGAARGELLSDGDSGHPGHSG SVTATDADGAEITVKAGEEALVLDVAPVDGASDFLLALEKVGKDDDDRKLISLQQTSS LSERIVVPAPEAGKYIVTVQASTLAGSATSVGYDLTRYDVQGTGGEGSFQVSPAQLPV TAGKKATYTASWSGLAAGNSYVGLVSYGGTAATTIVDVSTPAASAAPTATTAPAITGT PDVGRTLTASTGAWAPQGVTLATQWLSNGTPIAGATGSTFRVTSAVAGTALAVRVTAT ASDGQTGVATSPTVTARDAATVHLQATRPRGTASGTVHVQVSVTSAAKQAATGVVRVT VDGAEHDVPLDGSGTGCADITGVAPGTRTVQASYVGDNLVGGGTSRAQRILVR" misc_feature complement(631868..633343) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /inference="protein motif:HMMPfam:PF00082" /note="HMMPfam hit to PF00082, Peptidase S8 and S53,subtilisin, kexin, sedolisin, score 4.4e-14" misc_feature complement(632003..632035) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /note="PS00138 Serine proteases, subtilase family, serine active site." misc_feature complement(632246..632545) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /inference="protein motif:HMMPfam:PF02225" /note="HMMPfam hit to PF02225, Protease-associated PA,score 2.4e-18" misc_feature complement(633251..633286) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /note="PS00136 Serine proteases, subtilase family,aspartic acid active site." misc_feature complement(633380..633688) /locus_tag="CMS_0598" /old_locus_tag="CMS0598" /inference="protein motif:HMMPfam:PF05922" /note="HMMPfam hit to PF05922, Proteinase inhibitor I9,subtilisin propeptide, score 4e-09" gene complement(634099..635313) /locus_tag="CMS_0599" /old_locus_tag="CMS0599" /db_xref="GeneID:6156557" CDS complement(634099..635313) /locus_tag="CMS_0599" /old_locus_tag="CMS0599" /EC_number="1.1.1.42" /note="Converts isocitrate to alpha ketoglutarate" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="YP_001709366.1" /db_xref="GI:170781034" /db_xref="GeneID:6156557" /translation="MEKIKVEGTVVELDGDEMTRIIWQSIKDTLIHPYLDIDLEYYDL GIEKRDETDDQITIDAANAIKKHGVGVKCATITPDEARVEEFGLKKMWRSPNGTIRNI LGGTIFREPIIISNIPRLVPGWNKPIIVGRHAFGDQYRATDFRFEGEGTLTMTFTPKD GSEPQQFEVFQSPGSGVAMGMYNLDDSIRDFARASLSYGLARNYPVYLSTKNTILKAY DGRFKDLFQEVFEAEYAEQFAAAGLTYEHRLIDDMVAASLKWEGGYVWACKNYDGDVQ SDTVAQGFGSLGLMTSVLTTPDGKVVEAEAAHGTVTRHYRQHQQGKPTSTNPIASIYA WTRGLAHRAKLDGNDALKTFADTLEDVVITTVESGKMTKDLALLVGPDQPYQTTEEFL ASLAENLQTRLA" misc_feature complement(634129..635289) /locus_tag="CMS_0599" /old_locus_tag="CMS0599" /inference="protein motif:HMMPfam:PF00180" /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate dehydrogenase, score 7.1e-102" misc_feature complement(634447..634506) /locus_tag="CMS_0599" /old_locus_tag="CMS0599" /note="PS00470 Isocitrate and isopropylmalate dehydrogenases signature." gene 635537..635989 /locus_tag="CMS_0600" /old_locus_tag="CMS0600" /db_xref="GeneID:6156558" CDS 635537..635989 /locus_tag="CMS_0600" /old_locus_tag="CMS0600" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001709367.1" /db_xref="GI:170781035" /db_xref="GeneID:6156558" /translation="MSDMTLEELSARTIVAANTLTLKPGQEAFVAPVSHSIAEAYVNP TTAWPRVVMEDGEVVGFIMGNFDPEAHEEIFRSCIWRINVDADAQGHGVGRFAVLALA DEARSRGFDRLTVVWEPGEDGPEEFFTHVGFEVIGETQYGEAIGALAL" misc_feature 635684..635938 /locus_tag="CMS_0600" /old_locus_tag="CMS0600" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.2e-15" gene complement(636000..636962) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /db_xref="GeneID:6156559" CDS complement(636000..636962) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709368.1" /db_xref="GI:170781036" /db_xref="GeneID:6156559" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(636012..636554) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(636639..636704) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(636704..636825) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(636825..636890) /locus_tag="CMS_0601" /old_locus_tag="CMS0601" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 637131..637580 /locus_tag="CMS_0602" /old_locus_tag="CMS0602" /db_xref="GeneID:6156560" CDS 637131..637580 /locus_tag="CMS_0602" /old_locus_tag="CMS0602" /codon_start=1 /transl_table=11 /product="putative phosphotransferase enzyme IIA component" /protein_id="YP_001709369.1" /db_xref="GI:170781037" /db_xref="GeneID:6156560" /translation="MLPPLPDDAVTLGAEAADWRAAVRLVGDALVRSGAATPEYGDAM IRVVEEFGAYVVIAPGLALAHARPGPETLADGLAVVTLTDPVAFGHAHNDPVDVIVGL AVTTVDRHVSSVADMANIFNDATAIPRLRAATTVDEVRRIMAGEEGA" misc_feature 637137..637568 /locus_tag="CMS_0602" /old_locus_tag="CMS0602" /inference="protein motif:HMMPfam:PF00359" /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, score 4.6e-31" gene 637577..637849 /locus_tag="CMS_0603" /old_locus_tag="CMS0603" /db_xref="GeneID:6156561" CDS 637577..637849 /locus_tag="CMS_0603" /old_locus_tag="CMS0603" /codon_start=1 /transl_table=11 /product="putative phosphotransferase IIB component" /protein_id="YP_001709370.1" /db_xref="GI:170781038" /db_xref="GeneID:6156561" /translation="MKVVAICGVGIGTSGILKVNAERALARLGIEADVTAADLASVAS LGEDAQVILTSPELVDRLGPTYADVVVIENYFDLEEISAKLDAALG" misc_feature 637580..637846 /locus_tag="CMS_0603" /old_locus_tag="CMS0603" /inference="protein motif:HMMPfam:PF02302" /note="HMMPfam hit to PF02302, Phosphotransferase system,lactose/cellobiose-specific IIB subunit, score 2.1e-10" gene complement(637798..638841) /locus_tag="CMS_0604" /old_locus_tag="CMS0604" /db_xref="GeneID:6156562" CDS complement(637798..638841) /locus_tag="CMS_0604" /old_locus_tag="CMS0604" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709371.1" /db_xref="GI:170781039" /db_xref="GeneID:6156562" /translation="MIRRAFGWHRPLMAVAALMVVVAAACLVGGLVGHRVVTGAPVWD KPAKFSLSILVYAVSWAWLIARLPRFRRTAHRLGTVVAVALVVEQAVIVGAAAAGTTS HFNVSTPLATALWAVMAASVTVLYLCTFVTSLTVLRLRLPDKALTLGIRAGALIALVG IGLAYLMTSPTAAQLADFHGVVGAHAVGSADGGPGIPVLGWSTTAGDLRIPHFVGMHA LQLLPVAALLVGAAGRRIPALAPDRVRVRLTAIAAVAYLAVIAIVTVQALRGEPVTEP SPMIATAAVAVAAASLVAAVAVVLRGGGRPATTAPNTDHPHEPHGHGADAPAPTAQPS AASSLAEISSRSK" sig_peptide complement(637798..637914) /locus_tag="CMS_0604" /old_locus_tag="CMS0604" /note="Signal peptide predicted for CMS0604 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.633 between residues 39 and 40" misc_feature complement(order(637942..638010,638038..638106, 638143..638202,638332..638400,638434..638502, 638545..638613,638650..638697,638740..638808)) /locus_tag="CMS_0604" /old_locus_tag="CMS0604" /note="8 probable transmembrane helices predicted for CMS0604 by TMHMM2.0 at aa 12-34, 49-64, 77-99, 114-136,148-170, 214-233, 246-268 and 278-300" gene complement(638838..639494) /locus_tag="CMS_0605" /old_locus_tag="CMS0605" /db_xref="GeneID:6156563" CDS complement(638838..639494) /locus_tag="CMS_0605" /old_locus_tag="CMS0605" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001709372.1" /db_xref="GI:170781040" /db_xref="GeneID:6156563" /translation="MRYPRRIRITELAEATGVAPATVKYYVREGLLPAGTRVSDNRTD YDDEHARRVRLIRALIDVGRLPVARAREVLAVLDDDGRRVQEVFTVAQDALTPGPATA DAPPADALARVDAATADAGWCVLEGHAGRTQAARAVDAFARSGHPLGDDYLARYAEAA SIQAEADLAAVRGRPDRTAMAELMVVGTVLGDQLAAGLRRISQATVSMTAQAAAGGAS" misc_feature complement(639360..639473) /locus_tag="CMS_0605" /old_locus_tag="CMS0605" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 5.3e-08" misc_feature complement(639411..639476) /locus_tag="CMS_0605" /old_locus_tag="CMS0605" /note="Predicted helix-turn-helix motif with score 1974.000, SD 5.91 at aa 7-28, sequence IRITELAEATGVAPATVKYYVR" gene complement(639565..641268) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /db_xref="GeneID:6156564" CDS complement(639565..641268) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /codon_start=1 /transl_table=11 /product="putative phosphomannomutase" /protein_id="YP_001709373.1" /db_xref="GI:170781041" /db_xref="GeneID:6156564" /translation="MSREETAALVAAARAWQAQDPDPVTRAEVDELLALVEGTAAGAS AADREQAAAGIRDRFQTRLQFGTAGLRGELGAGPNRMNRVLVSQAAAGFADYLRSRSP RPSIVIGYDGRHNSRVFAEDTARIMAGAGVRTVLLPRALPTPVLAYAVKHLAVSAGVM VTASHNPARDNGYKVYLGDEDHGAQIVSPADRDIAAFIHKAAGERTVQQLPVADDFEI APETLIDSYVRETADLFAAPLAPLTWVYTPLHGVGWETAARVFDAVGVDAPIVVAAQA DPDPDFPTVDFPNPEEPGALDLAFEAAVRSDAELIIANDPDADRLAVAIADEHGAWRR LSGNEVGMLLGLGIAERYIEEGKTGTFASSLVSSPALEVVARELGFGYRETLTGFKWI SRVPDLVYGYEEALGYLVAPWITSDKDGISAAVAVLHGVMLLKSRGQTIDDYDRGFAE RFGSFASDQISVRVTDLAVIPRIMAKLRQSPPTSIGSRRVERMDDLAEGTADLPPSDV LRFHLGDGARLIVRPSGTEPKIKVYLDAQSTEGTVAERRDAARAIVADMAQAVPLLLE V" misc_feature complement(639604..639852) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /inference="protein motif:HMMPfam:PF00408" /note="HMMPfam hit to PF00408,Phosphoglucomutase/phosphomannomutase C terminal, score 0.00038" misc_feature complement(639925..640263) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /inference="protein motif:HMMPfam:PF02880" /note="HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, score 0.21" misc_feature complement(640273..640596) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /inference="protein motif:HMMPfam:PF02879" /note="HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, score 4.5e-05" misc_feature complement(640654..641085) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /inference="protein motif:HMMPfam:PF02878" /note="HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, score 1.7e-52" misc_feature complement(640753..640797) /locus_tag="CMS_0606" /old_locus_tag="CMS0606" /note="PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature." gene complement(641265..642092) /gene="punA" /locus_tag="CMS_0607" /old_locus_tag="CMS0607" /db_xref="GeneID:6156565" CDS complement(641265..642092) /gene="punA" /locus_tag="CMS_0607" /old_locus_tag="CMS0607" /EC_number="2.4.2.1" /note="catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphorylase" /protein_id="YP_001709374.1" /db_xref="GI:170781042" /db_xref="GeneID:6156565" /translation="MTYSNPLESPDADPQEIARQAARQIAELTGVERHDIALTLGSGW GKAADLIGETTATIPATEVVGFSKPALEGHVGSLRSVLLPSGRRALVIGARTHYYEGH GVRRVVHSVRTAAATGATTMILTNGAGGIKEHWTPGTPVLISDHINLTADSPLEGATF IDLTDLYSARLLAIAHEVEPDLDEGVYCQFRGPHYETPAEVRMAKAIGGHIVGMSTAL EAIAAREAGMEVLGMSLITNLAAGIQKTPLSHEEVIEAGRAAEGRIGGMLARIVGAL" misc_feature complement(641268..641996) /gene="punA" /locus_tag="CMS_0607" /old_locus_tag="CMS0607" /inference="protein motif:HMMPfam:PF00896" /note="HMMPfam hit to PF00896, Purine phosphorylase,family 2, score 2e-52" gene 642177..643625 /locus_tag="CMS_0608" /old_locus_tag="CMS0608" /db_xref="GeneID:6158894" CDS 642177..643625 /locus_tag="CMS_0608" /old_locus_tag="CMS0608" /note="catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity" /codon_start=1 /transl_table=11 /product="flavoprotein disulfide reductase" /protein_id="YP_001709375.1" /db_xref="GI:170781043" /db_xref="GeneID:6158894" /translation="MRMGYEFEANQRIAVLGGGPGGYEAAIAGAQLGAEVTLVERVGV GGSAVMTDVVPSKTLIATAEATNAIGEAADLGVQFFSRGEQTRRPVRPEVAVNLQAVN NRLLRLARQQSEDMKSSLIRAGVRIVQGEGRLDGPNRIIVSTGRGGGRGTDFDEIDAD TTVISTGASPRILDTAKPDGERILTWTQLYTMDCVPEHLIVVGSGVTGAEFASAYTAL GAKVTLISSRDQVLPGEDADAARVIEDVFTRNGMTVLSKSRAESVVRQGDGVVATLSD GRVVEGSHCLMAVGSVPNTAGIGLEEAGVQMSDSGHIRVNRVARTSVPSVYAAGDCTT FLPLASVASMQGRTAVYHAMGDAVSPTELRNVTSNIFTQPEIATLGWSQKQIEEGLAQ GDIYKLPLASNPRAKMQNVKDGFVKLFARTGSGTVIGGVIVAPKASELIFPLALAVEH RLTVDDVARAFTVYPSLSGSISDAARAMHIVL" misc_feature 642210..643199 /locus_tag="CMS_0608" /old_locus_tag="CMS0608" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.2e-63" misc_feature 643272..643601 /locus_tag="CMS_0608" /old_locus_tag="CMS0608" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 9e-22" gene complement(643706..645475) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /db_xref="GeneID:6156566" CDS complement(643706..645475) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /EC_number="6.4.1.2" /codon_start=1 /transl_table=11 /product="biotin carboxylase" /protein_id="YP_001709376.1" /db_xref="GI:170781044" /db_xref="GeneID:6156566" /translation="MTRVNKVLIANRGEIAVRIIRAARDAGIGSVAVYADQDRDALHV TLADEAYALDGQSSADTYLVIAKLLSIARRSGADAVHPGYGFLAENADFAQQVIDAGL IWIGPSPSAIQQLGDKTTARHVAERVGAPLAPGTLNPVSGADEVLDFVDVHGLPVAIK AAFGGGGRGLKVARTREEVPELFESATREAVAAFGRGECFVEKYLDRPRHVETQCLAD SAGTVVVISTRDCSLQRRHQKLVEEAPAPFLTDEQNAQLYAASKAILREVGYIGAGTC EFLVAQDGTISFLEVNTRLQVEHPVSEEVTGIDLVREQFRIAAGGLIDYDDPAPRGHS FEFRINGEDPGRGFFPAPGPVHVFQAPGGPGVRVDSGVRAGDVVSGAFDSLLAKLIVT GSSREDALERSRRALDEFEVQGLPTVLPFHRAIVRDAAFAPADGAPFSVYTRWIETEF DNTIEPWSGALEDAAEAPARHTVVVEVGGKRIEVSLPEDLAPAAGASASRRASAAPAR RKQSGSVDTSGGGSVTSPMQATVVKLAVEEGQQVVKGDLLVVLEAMKMEQPLTAHRDG TVTGLQAQVGETVPSGHRLLDIV" misc_feature complement(643712..643915) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /inference="protein motif:HMMPfam:PF00364" /note="HMMPfam hit to PF00364, Biotin/lipoyl attachment,score 1.2e-17" misc_feature complement(643790..643843) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /note="PS00188 Biotin-requiring enzymes attachment site." misc_feature complement(644135..644470) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /inference="protein motif:HMMPfam:PF02785" /note="HMMPfam hit to PF02785, Biotin carboxylase,C-terminal, score 3.3e-55" misc_feature complement(644489..645127) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /inference="protein motif:HMMPfam:PF02786" /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain, ATP-binding, score 2e-91" misc_feature complement(644591..644614) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /note="PS00867 Carbamoyl-phosphate synthase subdomain signature 2." misc_feature complement(645131..645469) /gene="accC" /locus_tag="CMS_0609" /old_locus_tag="CMS0609" /inference="protein motif:HMMPfam:PF00289" /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 4.3e-46" gene 645598..646125 /locus_tag="CMS_0610" /old_locus_tag="CMS0610" /db_xref="GeneID:6158586" CDS 645598..646125 /locus_tag="CMS_0610" /old_locus_tag="CMS0610" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709377.1" /db_xref="GI:170781045" /db_xref="GeneID:6158586" /translation="MTASGTGDDDARAAAADLQELLRATVGELRARRSPDEALAEVRV KRSFGPIKRQPAMVPVGRAWRLGVLLLSADGSLRRTGSITRAVEPTRSQGLDSGVEAR KEARRQAVRAFEEGDAVDYDWEPIALDAESLAAGSGPLSLRGRELRVQWGPNAHETRP LAAYLADRIEVLGMG" gene complement(646136..646807) /locus_tag="CMS_0611" /old_locus_tag="CMS0611" /db_xref="GeneID:6156567" CDS complement(646136..646807) /locus_tag="CMS_0611" /old_locus_tag="CMS0611" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709378.1" /db_xref="GI:170781046" /db_xref="GeneID:6156567" /translation="MTTRLHLASTSPARLALLRSAGIEPVVLPSDVDEPAAVAATEAQ RGPLGPEDMVQLLARSKAEAVVGQLVAGAPLTGLVLGGDSAFEIDGVVHGKPHTVARA TERWRAQRGREGRLHSGHWLIEVAEGRIVRGIGRAAVADVRFRADITDAEIDAYVATG EPLLVAGSFTIDSLGAAFIERIQGDPSTVVGLSLPTLRGLVRELGTEWTDLWNRQGAV EARLV" misc_feature complement(646172..646801) /locus_tag="CMS_0611" /old_locus_tag="CMS0611" /inference="protein motif:HMMPfam:PF02545" /note="HMMPfam hit to PF02545, Maf-like protein, score 5.4e-48" gene 646814..648139 /locus_tag="CMS_0612" /old_locus_tag="CMS0612" /db_xref="GeneID:6156568" CDS 646814..648139 /locus_tag="CMS_0612" /old_locus_tag="CMS0612" /codon_start=1 /transl_table=11 /product="putative RNA methyltransferase" /protein_id="YP_001709379.1" /db_xref="GI:170781047" /db_xref="GeneID:6156568" /translation="MVARGSGPPAARPVCPCRLRVCQGCGMGEQVGREVEVDVTNMAH GGVSVARHDGRVIFVSDAIPGERVRARITEDSKKSFWRADTVEVLDASPHRRPHVWAE ASVDRAPEDRVGGAELGHIRLSHQRELKRQVVVDSLSRMAHVDHDVRVQALPGDDESD GLGWRTRVSLHVADDGTVGPYASRSHRVIPVQSLPLATAGVNGAAPFGQRFPGVEGID LVAPSDGHVRMLLIDGKAQRRDTITERVRDREFKLEAGGFWQVHRRAAETLYDAVQSS IDEALFDPRAANLDLYGGVGLLAAAVGDRFGDTTRITSVESDEVATEFAGDNLAEWVG AASLTSRVDRYLQQLAREATPAERRRLQGATVVLDPPRAGAKKPVVDALAELHPAQVV YVACDPVALARDVALFAERGYELRSVRSYDLFPHTHHVESVAVLVPAGS" misc_feature 646895..647074 /locus_tag="CMS_0612" /old_locus_tag="CMS0612" /inference="protein motif:HMMPfam:PF01938" /note="HMMPfam hit to PF01938, Deoxyribonuclease/rho motif-related TRAM, score 8.6e-11" gene 648184..648942 /locus_tag="CMS_0613" /old_locus_tag="CMS0613" /db_xref="GeneID:6156569" CDS 648184..648942 /locus_tag="CMS_0613" /old_locus_tag="CMS0613" /codon_start=1 /transl_table=11 /product="putative two-component response regulator" /protein_id="YP_001709380.1" /db_xref="GI:170781048" /db_xref="GeneID:6156569" /translation="MGEAAVGARRRHATRGIRMTETMQGSDQAAEGRPPVRVAVVDDH ESVRLGLKAACLDAGFEFILAAANARELVEGLVGRECDVVVLDLSLGDGSSVTDNVKA AQGTGAAVLVHSIADRVASVREALAAGAAGVIPKSSATQTVMAAVATVARGDVLNNLE WATAIDADRDFAKAQLGRRERDVLHLYASGLPLKLVAQQLGIANSTAREYLDRIRVKY VEVGRPAPTKVDLLRRAVEDGILPGLDQDGGDGR" misc_feature 648289..648648 /locus_tag="CMS_0613" /old_locus_tag="CMS0613" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.3e-09" misc_feature 648754..648819 /locus_tag="CMS_0613" /old_locus_tag="CMS0613" /note="Predicted helix-turn-helix motif with score 1048.000, SD 2.76 at aa 191-212, sequence LPLKLVAQQLGIANSTAREYLD" gene 648932..651352 /locus_tag="CMS_0615" /old_locus_tag="CMS0615" /pseudo /db_xref="GeneID:6156570" gene complement(648953..649915) /locus_tag="CMS_0614" /old_locus_tag="CMS0614" /db_xref="GeneID:6156572" CDS complement(648953..649915) /locus_tag="CMS_0614" /old_locus_tag="CMS0614" /note="P" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709381.1" /db_xref="GI:170781049" /db_xref="GeneID:6156572" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(648965..649507) /locus_tag="CMS_0614" /old_locus_tag="CMS0614" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-38" misc_feature complement(649592..649657) /locus_tag="CMS_0614" /old_locus_tag="CMS0614" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 10-31, sequence AGPARLAPVTGVPSRTISRILR" misc_feature order(650213..650281,650294..650362,650447..650515, 650552..650620) /locus_tag="CMS_0615" /old_locus_tag="CMS0615" /note="4 probable transmembrane helices predicted for CMS0615 by TMHMM2.0 at aa 142-164, 169-191, 220-242 and 255-277" /pseudo misc_feature 650963..651259 /locus_tag="CMS_0615" /old_locus_tag="CMS0615" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 6.5e-10" /pseudo gene 651349..652371 /locus_tag="CMS_0616" /old_locus_tag="CMS0616" /db_xref="GeneID:6156571" CDS 651349..652371 /locus_tag="CMS_0616" /old_locus_tag="CMS0616" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709382.1" /db_xref="GI:170781050" /db_xref="GeneID:6156571" /translation="MIVVPRSIVLGLAALFSAYHVVLALVAISAPADPAVTLVAVALY LVATLMSLWPTSPTVMPVWLASFNLAVATVVPVLVTSQLAPGPLAPFTTWHVAAVGTL MTITSARRRQGFAWSGIVILAAQTVLWGGPAGLVAYGVTGSALWVAVSHVLAHALAKA ARDARQFHRAEREAADWQAAQEAHLYERQFRLRQTSRMAVPMLRRIVETGGDLSPEER QECLYLEGAIRDEIRGRTLLNDAVREQVMLARRRGTVVTLLDEGGIDDLDDTTRDVVL DRLAAAIRDTQADKIIARTVPEGSDTAITVVGLSVAGDGSASLLGSDDLDDEVDLWLE IPRPRI" sig_peptide 651349..651444 /locus_tag="CMS_0616" /old_locus_tag="CMS0616" /note="Signal peptide predicted for CMS0616 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.783 between residues 32 and 33" misc_feature order(651367..651435,651448..651504,651523..651591, 651619..651672,651685..651738,651751..651819) /locus_tag="CMS_0616" /old_locus_tag="CMS0616" /note="6 probable transmembrane helices predicted for CMS0616 by TMHMM2.0 at aa 7-29, 34-52, 59-81, 91-108,113-130 and 135-157" gene complement(652664..652897) /locus_tag="CMS_0617" /old_locus_tag="CMS0617" /db_xref="GeneID:6156573" CDS complement(652664..652897) /locus_tag="CMS_0617" /old_locus_tag="CMS0617" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709383.1" /db_xref="GI:170781051" /db_xref="GeneID:6156573" /translation="MTDAHGSAGAAGGGFRVLGGSPTEEELAAATAVIAALAAQPAAE QPARRVPDAWQRSQRGVRGTLVPGPGRWRGFSG" gene complement(652894..654507) /locus_tag="CMS_0618" /old_locus_tag="CMS0618" /db_xref="GeneID:6156574" CDS complement(652894..654507) /locus_tag="CMS_0618" /old_locus_tag="CMS0618" /codon_start=1 /transl_table=11 /product="propionyl-CoA carboxylase complex B subunit" /protein_id="YP_001709384.1" /db_xref="GI:170781052" /db_xref="GeneID:6156574" /translation="MTSHEPDEDAGAPDMYTTAGKLADLKRRYHEAVTASGEAAIQKQ HARGKMTARERIDQLLDHGSFVELDEFVRHRTHAFGMDTKRPYGDSVVTGTGTINGRQ VAVYSQDFTIFGGSLGEVAGEKIIKVMELAIKTGVPIIGILDSGGARIQEGVVALGKY GEIFRLNTRASGVIPQISLIMGPAAGGAVYSPALTDFVIMVDKTSHMFVTGPDVIKTV TGEEVGFEELGGALTHNKVSGVAHYLASDEDDALDYARTLLGFLPDNNLAELPEFPRT ADLEITAQDSKLDTIIPDSPNQPYDMKTIIELIVDDGEFLETQPLFAPNIIVGFARVE GRSVGIVANQPNAMAGTLNIEAGEKASRFVRFCDAFSIPILTLVDVPGYLPGTEQEWT GVIRRGAKLLYAYAEATVPLVTVITRKAYGGAYIVMGSKQLGADINLAWPTAEIAVMG GQGAVNILYRGEIKGAEQAGEDVAAVRTRLANEYTYNVASPFLAAERGELDNVIQPAA TRASVVKALRALRTKRASLPPKKHGNIPL" misc_feature complement(652903..654393) /locus_tag="CMS_0618" /old_locus_tag="CMS0618" /inference="protein motif:HMMPfam:PF01039" /note="HMMPfam hit to PF01039, Carboxyl transferase, score 2.1e-273" gene 654582..655397 /gene="birA" /locus_tag="CMS_0619" /old_locus_tag="CMS0619" /db_xref="GeneID:6156575" CDS 654582..655397 /gene="birA" /locus_tag="CMS_0619" /old_locus_tag="CMS0619" /EC_number="6.3.4.15" /note="putative ligase" /codon_start=1 /transl_table=11 /product="putative BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase (biotin--protein ligase)" /protein_id="YP_001709385.1" /db_xref="GI:170781053" /db_xref="GeneID:6156575" /translation="MSSWSARYGGGMDLPLSRLAAPRLLALDSAGSTNDELSRRASAD PAAWPDGSVVLTLDQTAGRGRRGRVWTAPPGRCLAVSVLCAPGRTDLDPGWLPLVAGL ALVATLRDLVPAPAEVTLKWPNDVHVDGRKVSGILGEIVAPGRMLVGTGLNLTLEEAE LPTPTSTSLRLSGVQDPDVDALLAAYLRELRARYLAWVDADGDARACGLVDELTRTCA TIGRDVRVELPGGGELLGRATGVDDDGRLTVESAGDPAVTSVAAGDVTHLRYQ" misc_feature 654657..655061 /gene="birA" /locus_tag="CMS_0619" /old_locus_tag="CMS0619" /inference="protein motif:HMMPfam:PF03099" /note="HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase, score 8.1e-21" misc_feature 655236..655385 /gene="birA" /locus_tag="CMS_0619" /old_locus_tag="CMS0619" /inference="protein motif:HMMPfam:PF02237" /note="HMMPfam hit to PF02237, Biotin protein ligase,C-terminal, score 2.1e-06" gene 655401..656195 /locus_tag="CMS_0620" /old_locus_tag="CMS0620" /db_xref="GeneID:6158627" CDS 655401..656195 /locus_tag="CMS_0620" /old_locus_tag="CMS0620" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709386.1" /db_xref="GI:170781054" /db_xref="GeneID:6158627" /translation="MAHTGDTQRYAPGEGGRALPVRGGRRARRKAEKEERRRVAEDEA GRLTASHDVDPRLGRPAAPPAAPAQQVTAADPERVLVRLRPHGRALTLPVLLLLAICL AGGYFGAWFPEPWENALLLVSLAGVAVFVTLLPVLVWLNRRYTVTTRRLIVSHGFFVR TRQELLHSRGYDVTLRRGPLQHLHRSGHVSINAGLESPVVLRDVPSAVLVVQALQDLM EENANMVAERRRQEESRRGRPGDPAWRQQDEARSVWPDDTQPWQRG" misc_feature order(655665..655733,655752..655820) /locus_tag="CMS_0620" /old_locus_tag="CMS0620" /note="2 probable transmembrane helices predicted for CMS0620 by TMHMM2.0 at aa 89-111 and 118-140" gene complement(656245..656736) /locus_tag="CMS_0621" /old_locus_tag="CMS0621" /db_xref="GeneID:6156576" CDS complement(656245..656736) /locus_tag="CMS_0621" /old_locus_tag="CMS0621" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709387.1" /db_xref="GI:170781055" /db_xref="GeneID:6156576" /translation="MQIAQFGLVGGAGFLVDLAVFNLLRATVLHPDAVEAGPLLAKVA STVVAIAVNWVGNRYWTFGKQRTTRRGREALEFLAVSVLGMVIGLACLYVSHYVLGLT SPLADNVSANVIGLGLGSAVRFVLYRQWVYSPARRHAAPQAEPARAPRADRIEDADRI AVP" misc_feature complement(656341..656724) /locus_tag="CMS_0621" /old_locus_tag="CMS0621" /inference="protein motif:HMMPfam:PF04138" /note="HMMPfam hit to PF04138, GtrA-like protein, score 6.7e-26" misc_feature complement(order(656356..656412,656440..656508, 656569..656637,656650..656718)) /locus_tag="CMS_0621" /old_locus_tag="CMS0621" /note="4 probable transmembrane helices predicted for CMS0621 by TMHMM2.0 at aa 7-29, 34-56, 77-99 and 109-127" gene 656806..658023 /locus_tag="CMS_0622" /old_locus_tag="CMS0622" /db_xref="GeneID:6156577" CDS 656806..658023 /locus_tag="CMS_0622" /old_locus_tag="CMS0622" /EC_number="4.1.1.21" /note="With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase ATPase subunit" /protein_id="YP_001709388.1" /db_xref="GI:170781056" /db_xref="GeneID:6156577" /translation="MARRTTLPVVPGAGIPAASGGPTHLQEEDTMTPTVGVVGGGQLA RMMIAPAVELGIGIRVLAEADGMSAGLAASAVGDYRDLDAVRAFARDVDVITFDHEHV PQHVLRALVAEGVAVHPGPDALLVAQDKLLMRERLEQLGVPVPVWARVADREALAAFL ADNGGVAVVKTPRGGYDGKGVRVVRSADEAGDWFDALGAGDALLAEELVDYARELAQS VARRPSGDIAAWPVVESIQRDGVCAEVIAPAHGASARLRETAEEMARGIAEGLGVTGV LAVELFETVDGRLLVNELAMRPHNTGHWSMDGAVTGQFEQHLRAVLDLPLGSTRPLAP WSVMINVLGGPEAGDIADRYPRALADQPEARFHFYGKDPRPGRKVGHVTVVGDDLDET AYRARAAAAFFRG" sig_peptide 656806..656865 /locus_tag="CMS_0622" /old_locus_tag="CMS0622" /note="Signal peptide predicted for CMS0622 by SignalP 2.0 HMM (Signal peptide probability 0.829) with cleavage site probability 0.214 between residues 20 and 21" misc_feature 656983..657465 /locus_tag="CMS_0622" /old_locus_tag="CMS0622" /inference="protein motif:HMMPfam:PF02222" /note="HMMPfam hit to PF02222, ATP-dependent carboxylate-amine ligase-like, ATP-grasp, score 6.7e-24" gene 658114..658674 /locus_tag="CMS_0623" /old_locus_tag="CMS0623" /db_xref="GeneID:6156578" CDS 658114..658674 /locus_tag="CMS_0623" /old_locus_tag="CMS0623" /EC_number="4.1.1.21" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase catalytic subunit PurE" /protein_id="YP_001709389.1" /db_xref="GI:170781057" /db_xref="GeneID:6156578" /translation="MARAGTRDPAPSMEPVNPDTPALVGLVMGSDSDWNVIEKASLAL DALGIALEVEVLSAHRTPERMIAYGQSARERGIRVIIAGAGGAAHLPGMIASVTTLPV IGVPVPLATLDGMDSLLSIVQMPAGVPVATVSIGGAENAGLLAARILSTSDDRIADAL ARHRAELAELVERKNAALQQKVSSRT" misc_feature 658177..658647 /locus_tag="CMS_0623" /old_locus_tag="CMS0623" /inference="protein motif:HMMPfam:PF00731" /note="HMMPfam hit to PF00731, 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase, score 4.1e-83" gene 658749..660020 /locus_tag="CMS_0624" /old_locus_tag="CMS0624" /db_xref="GeneID:6156579" CDS 658749..660020 /locus_tag="CMS_0624" /old_locus_tag="CMS0624" /codon_start=1 /transl_table=11 /product="LytR family transcriptional regulator" /protein_id="YP_001709390.1" /db_xref="GI:170781058" /db_xref="GeneID:6156579" /translation="MLNVLIPGSAQVLAGSRRLGRVGLVSTMVVWGLAVVAGGLALFA RGALIQVVSQEWLLVVLQLLLAAYAVLWVVLALDTLRLARIIRVAPRARPVIAALSVL LMVGTAGSAGYAAYVVGVGRGALGGIFGDYATEAPVDGRYNIMLLGGDAGSDRAGLRP DSITVVSIDADTGRATMVGLPRDMEKVPFSDGSPLKERYPNGYQRCDVDACMLNSIYT EVEVYKKDLYPDAEEKGSLPGIEAMREAVQGVTGLTIQYYALIDMQGFSEMVDALGGI DIDVKRRIGMGSGHDDKFRPVPIPEWIEPGQQKLDGYHALWYARSRYQATDYDRMSRQ REVQQAVLKQFDPANVLTKFDAIAQAGQQVVKTDIPRGMLGYFTQLALKTKDQPIDDL EIVPPRFDSQKPDFPAVRQAIQQQFANGSAG" misc_feature order(658809..658877,658920..658979,659040..659108) /locus_tag="CMS_0624" /old_locus_tag="CMS0624" /note="3 probable transmembrane helices predicted for CMS0624 by TMHMM2.0 at aa 21-43, 58-77 and 98-120" misc_feature 659223..659789 /locus_tag="CMS_0624" /old_locus_tag="CMS0624" /inference="protein motif:HMMPfam:PF03816" /note="HMMPfam hit to PF03816, Cell envelope-related transcriptional attenuator, score 6.8e-27" gene complement(660037..661176) /locus_tag="CMS_0625" /old_locus_tag="CMS0625" /db_xref="GeneID:6156580" CDS complement(660037..661176) /locus_tag="CMS_0625" /old_locus_tag="CMS0625" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709391.1" /db_xref="GI:170781059" /db_xref="GeneID:6156580" /translation="MTTTLRVIIDQLTGPTPGGIGRYAEDLTSAIVATTPSGCEVEGV VSAITPEQTADLEERLPGLARITRVPLPRRELSRAWQLGLPTPGTTGMVHAPGLLAPL RRHDRVNTNDQIVATIHDVNAWTHPESMTSASVSWTKAMAKRARKHADAVVVPSHALA DELARYVDLGDRVRVIGGAVSPRIALPEDPAARAAELDLPADYLLTVGSLEPRKGVQA LVQALVRPETGDLPLLIVGPATWGDVELAQVADEAGVDPSRVRSLGSLTDADLAVALD RATVFVHPSLSEGFGLPVVEALSFGTPVVHSDAPALLEVAADAGVVVPREDPDGYPLR LAEAIGGLLSDTAARERLAVVGQDRARAFSWRDAAEKVWQLHADL" misc_feature complement(660100..660615) /locus_tag="CMS_0625" /old_locus_tag="CMS0625" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 7.6e-17" misc_feature complement(660382..660447) /locus_tag="CMS_0625" /old_locus_tag="CMS0625" /note="Predicted helix-turn-helix motif with score 1186.000, SD 3.23 at aa 244-265, sequence VELAQVADEAGVDPSRVRSLGS" gene complement(661268..661972) /locus_tag="CMS_0626" /old_locus_tag="CMS0626" /db_xref="GeneID:6156581" CDS complement(661268..661972) /locus_tag="CMS_0626" /old_locus_tag="CMS0626" /codon_start=1 /transl_table=11 /product="putative polysaccharide ABC transport ATP-binding protein" /protein_id="YP_001709392.1" /db_xref="GI:170781060" /db_xref="GeneID:6156581" /translation="MENVRKSFLLRHTHSIKETVIAAVRRKPLASTFNALEDVSFEVR PGESVALMGFNGSGKSTLLKLISGVYQPDSGDVLARGRIAGLIEVGAGFHPDLSGREN IYLNAAILGMDQHEIDARFDQIVEFSEIEKFIDTEVKHYSSGMFLRLAFSVAIHTEVD ILLVDEILSVGDEPFQRKCLAKIRELHDQGKTLVVVSHDLDMVSDLCERGILIQSGRV AFDGPSKDAVERMRQG" misc_feature complement(661325..661837) /locus_tag="CMS_0626" /old_locus_tag="CMS0626" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.6e-33" misc_feature complement(661793..661816) /locus_tag="CMS_0626" /old_locus_tag="CMS0626" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(661998..662867) /locus_tag="CMS_0627" /old_locus_tag="CMS0627" /db_xref="GeneID:6156582" CDS complement(661998..662867) /locus_tag="CMS_0627" /old_locus_tag="CMS0627" /codon_start=1 /transl_table=11 /product="putative polysaccharide ABC transport integral membrane protein" /protein_id="YP_001709393.1" /db_xref="GI:170781061" /db_xref="GeneID:6156582" /translation="MSSMTSTQSREFSRPGTGAGLLDVYRRRYLLSLLVKKEVQVRYR GSVLGWLWSYVKPAAQFAVFFVAMGVFLQLNRNQVNYPVYLFSGIILINFYTEAFSNS TKSLVDNGALIKKIYLPRELFPVSSTFVALVNFLPQLVILLVVCLLVGWAPTPVQVLG IFLAVAIIGTLAIGLGMLFGAANVSFRDSQNFVELIVMVVVWASPVLYPYAQVAKVLP DWLLVIYQLNPVTAAVELFHAAFWYPTTGGSGELPPNLWVYGFIALGVSLLSLLLGQL VFKKLEGRFAQDL" misc_feature complement(order(662034..662102,662139..662207, 662226..662285,662328..662396,662415..662483, 662580..662633,662652..662720)) /locus_tag="CMS_0627" /old_locus_tag="CMS0627" /note="7 probable transmembrane helices predicted for CMS0627 by TMHMM2.0 at aa 50-72, 79-96, 129-151, 158-180,195-214, 221-243 and 256-278" misc_feature complement(662127..662555) /locus_tag="CMS_0627" /old_locus_tag="CMS0627" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 2.6e-17" gene complement(662963..663817) /locus_tag="CMS_0628" /old_locus_tag="CMS0628" /db_xref="GeneID:6156583" CDS complement(662963..663817) /locus_tag="CMS_0628" /old_locus_tag="CMS0628" /EC_number="1.1.1.133" /codon_start=1 /transl_table=11 /product="putative dTDP-sugar reductase" /protein_id="YP_001709394.1" /db_xref="GI:170781062" /db_xref="GeneID:6156583" /translation="MSRILVTGGRGMLGQDLVPALAAHDVTAPARAELDITDEAAVRA AVAGHDVVVNLAAYTAVDAAEEHEDEARAINATGAGVLARAAAEAGARIVHVSTDYVF DGSATTPYPEDAPHAPVSAYGRTKAEGERLVLDGHPDGASIVRTAWLYGAGGPSFPST MLRLAASHDTVSVVDDQRGQPTWTVDLAARIVELVDAGAPAGVFHGTATGETTWFGLA QAVFAEAGLDPERVRPTDSASFVRPAPRPAYSMLGHDAWGRVGLAPLRDWREALSDAA GHGVLRAR" misc_feature complement(663002..663406) /locus_tag="CMS_0628" /old_locus_tag="CMS0628" /inference="protein motif:HMMPfam:PF04321" /note="HMMPfam hit to PF04321, dTDP-4-dehydrorhamnose reductase, score 5.8e-67" gene complement(663814..664803) /locus_tag="CMS_0629" /old_locus_tag="CMS0629" /db_xref="GeneID:6156584" CDS complement(663814..664803) /locus_tag="CMS_0629" /old_locus_tag="CMS0629" /codon_start=1 /transl_table=11 /product="putative sugar dehydratase" /protein_id="YP_001709395.1" /db_xref="GI:170781063" /db_xref="GeneID:6156584" /translation="MRILVTGGAGFIGSNFVRHALQDHYAGLEGADVVVLDALTYSGN LENLAPVSDSPRYTFVQGDIRDDAVLDEWIPQVDAVVHFAAESHVDRSVRDASIFVET NVLGTQKLLDAALRHDLKRFVHVSTDEVYGSIAEGSWDEERPLEPNSPYSASKAGSDL LARSYHRTHGLNVSITRCSNNYGPYHFPEKVIPLFVTNLIDDKHVPLYGEGLNIRDWL HVDDHCRGIALVLVQGAPGEIYNIGGGTELTNRELTQLLLDATGRDWSYVDRVEDRKG HDLRYSVDISKIQRELGYAPQVPFAEGLADVVQWYRDNRAWWEPLKARAELPA" misc_feature complement(663859..664797) /locus_tag="CMS_0629" /old_locus_tag="CMS0629" /inference="protein motif:HMMPfam:PF01370" /note="HMMPfam hit to PF01370, NAD-dependent epimerase/dehydratase, score 9.9e-158" misc_feature complement(664306..664392) /locus_tag="CMS_0629" /old_locus_tag="CMS0629" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 664981..665433 /locus_tag="CMS_0630" /old_locus_tag="CMS0630" /db_xref="GeneID:6156585" CDS 664981..665433 /locus_tag="CMS_0630" /old_locus_tag="CMS0630" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709396.1" /db_xref="GI:170781064" /db_xref="GeneID:6156585" /translation="MAASRIRALLRDERVAFLLVGGFNTAFAFLLFAGLAATAGRALD DAGHPVAGSLVPLAGSYAVAILVAFLLYRRFVFRVRGHVLRDLARFVSVYAVSITLNA VSLPLLVSFGVERLVAQALIVVAITVISYVGHRWFSFRRPPGEGRAGR" sig_peptide 664981..665103 /locus_tag="CMS_0630" /old_locus_tag="CMS0630" /note="Signal peptide predicted for CMS0630 by SignalP 2.0 HMM (Signal peptide probability 0.982) with cleavage site probability 0.688 between residues 41 and 42" misc_feature 665026..665397 /locus_tag="CMS_0630" /old_locus_tag="CMS0630" /inference="protein motif:HMMPfam:PF04138" /note="HMMPfam hit to PF04138, GtrA-like protein, score 1.7e-10" misc_feature order(665029..665097,665125..665193,665251..665319, 665329..665397) /locus_tag="CMS_0630" /old_locus_tag="CMS0630" /note="4 probable transmembrane helices predicted for CMS0630 by TMHMM2.0 at aa 17-39, 49-71, 91-113 and 117-139" gene 665459..666064 /locus_tag="CMS_0631" /old_locus_tag="CMS0631" /db_xref="GeneID:6156586" CDS 665459..666064 /locus_tag="CMS_0631" /old_locus_tag="CMS0631" /codon_start=1 /transl_table=11 /product="putative dTDP-sugar epimerase" /protein_id="YP_001709397.1" /db_xref="GI:170781065" /db_xref="GeneID:6156586" /translation="MQIRELAVPDAYELTPIQRTDDRGVFLEWYRFDEIQEAVGHPLD LRQANMSVSRRGVVRGVHFADVPRGQAKHVKAVSGAVLDFIVDIRVGSPTFGQWDSVR LNTETHKAVYISEGLGHCFVALTDDAAVTYLVSDVYNPGAEHGITPLDPELGLVFPEE AGEPLLSPKDLEAPTLAEAAAAGLLPTWSDMRAFHDAQKVS" misc_feature 665465..665995 /locus_tag="CMS_0631" /old_locus_tag="CMS0631" /inference="protein motif:HMMPfam:PF00908" /note="HMMPfam hit to PF00908, dTDP-4-dehydrorhamnose 3,5-epimerase related, score 1.3e-73" gene 666068..666931 /locus_tag="CMS_0632" /old_locus_tag="CMS0632" /db_xref="GeneID:6156587" CDS 666068..666931 /locus_tag="CMS_0632" /old_locus_tag="CMS0632" /codon_start=1 /transl_table=11 /product="putative nucleotidyl transferase" /protein_id="YP_001709398.1" /db_xref="GI:170781066" /db_xref="GeneID:6156587" /translation="MKGIILAGGSGTRLWPITKGISKQLMPIYDKPMIYYPLSTLMMA DIREVLIITTPEYNDQFRALLGDGSHLGMRIEYAVQPSPDGLAQAFVIGEEFIGDDSV ALVLGDNIFHGAGLGTSLRKNTEIDGALIFAYHVADPTAYGVVEFDEDFTAVSIEEKP AKPKSAYAVPGLYFFDNDVVEIAKGIQPSERGELEITAVNDHYLQAGRLRVQVLDRGT AWLDTGTFESMMQASEYVKVIEDRQGFKIGCIEEIAYRAGWIDRDALEELARPLIKSG YGRYLVTLLDS" misc_feature 666071..666784 /locus_tag="CMS_0632" /old_locus_tag="CMS0632" /inference="protein motif:HMMPfam:PF00483" /note="HMMPfam hit to PF00483, Nucleotidyl transferase,score 1.9e-99" gene complement(666977..667828) /locus_tag="CMS_0633" /old_locus_tag="CMS0633" /db_xref="GeneID:6156588" CDS complement(666977..667828) /locus_tag="CMS_0633" /old_locus_tag="CMS0633" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709399.1" /db_xref="GI:170781067" /db_xref="GeneID:6156588" /translation="MSAPRVSIVIPAYNNADYLAETVDSVLAQTFTDFEVVIADHAST DGTWDVMHRYADEPRVRLLRTDAGGGALRNWNRVSQEARGELIKLVCGDDLLYPTILE RQVAELDASPSVVLVASPRDIVDADSRPIVRDHGVSGSRIAISGAAAVRRTVRSGTNI FGEPGCVLMRRADLEAVGWWDSRWPYLIDETTYAKVLLRGDFASVGPKALAGFRISDS QWSVRLAGEQASAAAGFHHWVLDEHPGVVSRADVRLGDAMARAKALSRRLVYLYLGRR MSRSEVR" misc_feature complement(667295..667810) /locus_tag="CMS_0633" /old_locus_tag="CMS0633" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 1e-28" gene 668103..670340 /locus_tag="CMS_0634" /old_locus_tag="CMS0634" /db_xref="GeneID:6156589" CDS 668103..670340 /locus_tag="CMS_0634" /old_locus_tag="CMS0634" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_001709400.1" /db_xref="GI:170781068" /db_xref="GeneID:6156589" /translation="MWRNQLNVSKRVVWPLVVVVGVLVGAVIPLLVEPGYYFVDDSQS GLFGQWYEIGNRVLAGQWALVVPQVWQSGNYLAEGAWGLFSPVLWLIGVGSHQLADAA LYVTLVKLVFLVVAGLGAQLLARTFGIPRSWAAVTGIAAPLAGFTLYMDAPSWANGLM AYCLWPLAWALARRTVLLGRSAVPAVLVGATLIGFSYAAATIFLGLVLGSTLFEAWRL KRPGMVLRAFWLSVSLGSFAVVVHLPGLLTAPVTGRTDGIINTGLLTVNLSGLFTSST PVGSPQIYIFDRYFPLVPMLYIAWFLPLLAFVDWAALMRLLRSRTRRGIVVVLVAATI GVLLPSDFAVFRFPVRMMPYLTLAVLLITALALSRARIARLSRRRVLFAVGFVLASSA LTDSQTPAYWKVIVLAGLASVAGVLLAAHVIHRRQGPAAASASAPISRDGVTRSLAVL AIAGTLLFLIPQHVAHPSSPLRNYDVPADVADYQRQLAGAEGDVLVIGTVADDAAERK QWADTLVANLWYVNPANVQNAYSSVYFPAYQDTLCMAYNGYTCYQLFSRLFTVEPQTG EQYVDLLSVSSIQLIKESFPTDADWSRVPDGWHVASDTSLTRLLVRDEPLPTAGGVVW ESDGTRVTEVDRDDSGVRFRVDAVPSDGGSVALSRIPWPGYAASEGEVEKRPIAGFLT RVDLDGVRPGDVVDVTFRSPGWQVQSVAGLLVLIGLGVIEVHRFRGRCRRSASTSSRP AGVRA" sig_peptide 668103..668198 /locus_tag="CMS_0634" /old_locus_tag="CMS0634" /note="Signal peptide predicted for CMS0634 by SignalP 2.0 HMM (Signal peptide probability 0.828) with cleavage site probability 0.557 between residues 32 and 33" misc_feature order(668139..668198,668394..668462,668481..668549, 668562..668621,668658..668726,668784..668852, 668889..668957,668985..669053,669072..669140, 669153..669221,669240..669284,669312..669371, 669429..669497) /locus_tag="CMS_0634" /old_locus_tag="CMS0634" /note="13 probable transmembrane helices predicted for CMS0634 by TMHMM2.0 at aa 13-32, 98-120, 127-149, 154-173,186-208, 228-250, 263-285, 295-317, 324-346, 351-373,380-394, 404-423 and 443-465" gene 670337..671299 /gene="TTHA0885" /locus_tag="CMS_0635" /old_locus_tag="CMS0635" /db_xref="GeneID:6156590" CDS 670337..671299 /gene="TTHA0885" /locus_tag="CMS_0635" /old_locus_tag="CMS0635" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709401.1" /db_xref="GI:170781069" /db_xref="GeneID:6156590" /translation="MTVAPPRVVAVVVAYNRRELVMETLGALGRQSRQPDAVVVVDNA STDGSADAVAAAFPDANLTRLARNTGGAGGFAVGIERALHAHEADLVWLMDDDTVPDP GALAALLRARAQAPARTVVLASAVRWVDGRPHPMNTPRTRPSAGRRERERAAAHGCVP VRSASFVSFMVEADAVRRHGLPVADYFLWNDDFEYSTRLLRRGRGHLVVDSTVEHRTR TFGSTDVDPGARFYFEVRNKVWLLTRSRALSPVERVLYAGAATRSWARTFLRSSDRAV LADGLRRGLRDGFASGPRESAAVLADLGGITEGVARLERGAGRA" misc_feature 670361..670870 /gene="TTHA0885" /locus_tag="CMS_0635" /old_locus_tag="CMS0635" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 1.4e-17" gene complement(671342..672340) /locus_tag="CMS_0636" /old_locus_tag="CMS0636" /db_xref="GeneID:6159082" CDS complement(671342..672340) /locus_tag="CMS_0636" /old_locus_tag="CMS0636" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709402.1" /db_xref="GI:170781070" /db_xref="GeneID:6159082" /translation="MNATPVRPLVSFILPSYNEAGSVDVFYRTLVETIEGADLDLDME LIYVNDGSRDDTLQKLLAIAATDDRVQVIDFSRNFGHQIAVTAGLDHARGDAAIIMDT DLQDPPRVAVELIRTWREGYNVVYAQRRTRKDTFFKKVTADAFYRVLQLVAEIEIPRN TGDFRLIDRKVIDAIRRFPERNRFLRGMVSYVGFRQTSVQFDRDERHSGETGYPLRKM LKFAADGILGFSTFPLKLIQLVGWIVSAISALLVVYVLISRLVAPENTVPGWTFTVIA ILFVGGVQIIMLSVLGSYLGRVYDEVQNRPLYLIDTHHGARPIQKTVAVDPLRPEV" misc_feature complement(order(671456..671524,671567..671635)) /locus_tag="CMS_0636" /old_locus_tag="CMS0636" /note="2 probable transmembrane helices predicted for CMS0636 by TMHMM2.0 at aa 236-258 and 273-295" misc_feature complement(671813..672310) /locus_tag="CMS_0636" /old_locus_tag="CMS0636" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 3.4e-25" gene complement(672432..674162) /locus_tag="CMS_0637" /old_locus_tag="CMS0637" /db_xref="GeneID:6156591" CDS complement(672432..674162) /locus_tag="CMS_0637" /old_locus_tag="CMS0637" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709403.1" /db_xref="GI:170781071" /db_xref="GeneID:6156591" /translation="MLVHRTGSVVASFRDYFVYDQLSYLSMVVNFARGDFASVEPFTE TGRNTYPHLYYLVLGASAHLTGLGPVEAWNVVGTILQAGLVAAIAIACIRVTGRAWTG ALGFVPLLLGTFAWTQGPGQWFWQMSSHAVLWGPFGVLFTLNGEAAALSVAGIAFLGG LVPFLRGSSRRARLVAMTVVAVVVGGLLNVHVYSFLATVFLSFYVVAAYAVLERPRRR LLALSAALVPVSLGLAVVVAGAVGPLPAFVVGLLPTVPGLLATIGRTRGLALIPMGAA LAATLPQIVTTVLASAAGDPFLSYRVASSKDLGVDLPLGPIAGAALIVPLVVILVAGI RARRTVWTAYAGGAMLAWAITSTNDLWRANQEPYRLWIDSFLLIAVTIVPVLLDVAVR TLRAGTTDAEAAHGESTGPARAPRRTRVLVASCAALVVAVGATSALDWGRFFSAGREL RQITFAEPLDRAIAEVTAGATDGSIVAGPCLDPQIVKVDSGRSVAHYNLGMAWPADRD AVDAVRTSAADGQVDVDAARVAGVAWLVADSSCTTGPSPASDPGLTEVAAAVYDDVTG ARAVLYRIGG" misc_feature complement(order(672840..672908,672993..673052, 673095..673148,673161..673229,673287..673355, 673374..673427,673440..673508,673527..673580, 673590..673643,673680..673748,673791..673859, 673878..673946)) /locus_tag="CMS_0637" /old_locus_tag="CMS0637" /note="12 probable transmembrane helices predicted for CMS0637 by TMHMM2.0 at aa 78-100, 107-129, 144-166,179-196, 200-217, 224-246, 251-268, 275-297, 317-339,344-361, 376-395 and 424-446" gene 674456..675304 /locus_tag="CMS_0638" /old_locus_tag="CMS0638" /db_xref="GeneID:6156592" CDS 674456..675304 /locus_tag="CMS_0638" /old_locus_tag="CMS0638" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709404.1" /db_xref="GI:170781072" /db_xref="GeneID:6156592" /translation="MPTEAFSLLLPVYRGDRPEFLRRAFRSSVDDQTLRPDEVVVVRD GPVSAELARTMAELAEASPVPVVTVELARNMGLAYALERGLEACAHDVVARMDADDIS LPERFARQLELISSGLDLVGTGMYEFADEVGTIAGRRTPPVGADAISRYARFHDPFNH PTVVYRRQAVKRAGGYLPLGLMEDYYLFARMIQSGARVENLADPLVMYRVSAGAYARR GGVAQLRAELRLQREFRRRRFTSLAQALRNVLVRGSYRLIPEAVRRGLYRRLITRDRT APRARA" misc_feature 674474..674977 /locus_tag="CMS_0638" /old_locus_tag="CMS0638" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 3.5e-20" gene 675372..676535 /gene="glf" /locus_tag="CMS_0639" /old_locus_tag="CMS0639" /db_xref="GeneID:6156593" CDS 675372..676535 /gene="glf" /locus_tag="CMS_0639" /old_locus_tag="CMS0639" /EC_number="5.4.99.9" /codon_start=1 /transl_table=11 /product="UDP-galactopyranose mutase" /protein_id="YP_001709405.1" /db_xref="GI:170781073" /db_xref="GeneID:6156593" /translation="MSPDLVVVGSGFFGLTIAERVAEELGLKVLVIDRRDHIGGNAYS EKDPETGIEVHRYGAHLFHTSNETVWEYVNRFTDFTPYVHRVYTEHEGEVFPLPINLG TINQFFRSAHGPQAARELIAEQASELDAGEARNLEGKGISLIGRPLYEAFIRDYTAKQ WQTDPTDLPAEVISRLPVRYTYDNRYFNDTHEGLPVEGYTAWLERMADHPNIEVRLET DFFDETQEVNRASVVGKVPVVYTGAIDRYFDYSEGALSWRTLDFEREVLPVGDFQGTP VMNYADADVPFTRIHEFRHFHPERDAPADKTVIMREYSRFAEGEDEPYYPVNTAADRE GLLKYRELAKQEEGVFFGGRLGTYQYLDMHMAIGAALSMYENKLKPVLAKDAS" misc_feature 675822..676451 /gene="glf" /locus_tag="CMS_0639" /old_locus_tag="CMS0639" /inference="protein motif:HMMPfam:PF03275" /note="HMMPfam hit to PF03275, UDP-galactopyranose mutase,score 3e-118" gene 676535..678553 /locus_tag="CMS_0640" /old_locus_tag="CMS0640" /db_xref="GeneID:6158717" CDS 676535..678553 /locus_tag="CMS_0640" /old_locus_tag="CMS0640" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709406.1" /db_xref="GI:170781074" /db_xref="GeneID:6158717" /translation="MAADLAGAPAELDLIQRVILPSEHDPDIVPLYVDADYWTSIPVA PEKRRRSPLRVVDADTHNAVVRLSDMGIISAIRGDRGFQVPHRRKVSFGTYFNAFPAS YWRASTTLDGVVLEVETQGEGQVIVYRSNARGVIQKVDGASVTGSTTSRFELPFTFFA DGGWYWFDLMGEEADFALVEAGWYAPAGTAPTVGAAGSVSIAITTLNRAEYCVKLLTD IGEKPDVAALLDHVYVTDQGTQKVADQPAFPRAQELLGAKLRVIDQANLGGSGGFSRG MYETLKEGASDYVLVMDDDITLEPESIRRAVKFADYARTPTIVGGHMFDMYDKSKLHA YAEGFDMWNFMWGPVTPTRHDFSASNLRQTRWMHRRVDAEYNGWWMCLIPVSTIKQVG LSLPVFIKWDDAEYALRAKEVGVPTVTLPGAAVWHVSWVDKDDSQDWQAFFHARNRLI AALLHSPYERGGRFLTANLATDVRHLVSMQYFALAARHEAYRNILRGPRGLHQDMVTR LARTRELAKGFTDGVPIKDRAALPEIVAPDKPQRRRGGGAPSGIARIVWLARTVARHA FAPLSPAATRGPEAHLAFEDARWWVVPSFDSVLVSNAEGSAALLHRRDPVLFRRMLWT SIVLRWRILARWPQLKAAYRAALPTVTSPESWARTFGVDQPTTSRRKG" gene 678632..680527 /locus_tag="CMS_0641" /old_locus_tag="CMS0641" /db_xref="GeneID:6156594" CDS 678632..680527 /locus_tag="CMS_0641" /old_locus_tag="CMS0641" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709407.1" /db_xref="GI:170781075" /db_xref="GeneID:6156594" /translation="MRIASHGTGTQGDLLLDNGVDHVRRARRRSRLIACLAVWAVALG VGLVGTGTIGGPAEPAQAASGADFDPGMIISDAKFYDGDAMSQGDIQSFLRARVPSCA SGYVCLKDYVENTPARSADSRCSSLQASRLSGADIVYWVGRACGVSQAALLVLLEKEQ GLVTDSTPTDRQFRSATGYGCPDTAACDSLYYGFFNQVYNAAHQFKVYQSTPTRWNYQ AGRSNRILWHPNADCGSSQVTIRNQATAGLYIYTPYQPNAAALRNLYGTGDSCSSYGN RNFWRLYTNWFGSTSDGPASSFVKTATDDTVYLVSGGQKHQVPDFGVYQSLDALGGIS TVPRSYLDALGTGIAASELVRDPSSGAVALVQADRRHRFASCDLVASYGYGCGDAVNL DPGQLQALPDAGEMSAFFVLPGSPVTYLLSGGVKYPVSTWAAVLGLNGGRSPFVATMR APVGARYTTGHAALQPGTLAKASNSADVFLVDGLDRKIRVPDFAVTAELGLGRSFATV APATMDGYPRAAADLSLLVRCAGVTSLATQGNVVALSSPGSTGLAVTDLASTTCAALD PTGRAVSGPVFVKSSTSDTVSLLQGGQARPVATWDRLVAIAGTSTPPITVLGPPALAR IPVGAAA" sig_peptide 678632..678817 /locus_tag="CMS_0641" /old_locus_tag="CMS0641" /note="Signal peptide predicted for CMS0641 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.993 between residues 62 and 63" misc_feature 678725..678793 /locus_tag="CMS_0641" /old_locus_tag="CMS0641" /note="1 probable transmembrane helix predicted for CMS0641 by TMHMM2.0 at aa 32-54" gene 680665..681135 /locus_tag="CMS_0642" /old_locus_tag="CMS0642" /db_xref="GeneID:6156595" CDS 680665..681135 /locus_tag="CMS_0642" /old_locus_tag="CMS0642" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709408.1" /db_xref="GI:170781076" /db_xref="GeneID:6156595" /translation="MDQHAHDVEAPREQTAPPGVLLRLIKDERIAFLLVGGFNTVLGT AWFALFYLLWGHLIPYPVVLIIAWAVQLPVSFTLHRKLVFKVSGNLLPDFSRYTLVNL VPLFANMLLLPLVVETTPLEPIVAQILVTIVITVATYTGHKFFSFRRPRDEAVR" misc_feature order(680803..680871,681034..681102) /locus_tag="CMS_0642" /old_locus_tag="CMS0642" /note="2 probable transmembrane helices predicted for CMS0642 by TMHMM2.0 at aa 7-29 and 84-106" gene complement(681172..682464) /locus_tag="CMS_0642A" /old_locus_tag="CMS0642A" /db_xref="GeneID:6156596" CDS complement(681172..682464) /locus_tag="CMS_0642A" /old_locus_tag="CMS0642A" /note="Tandem duplication suggested by similarity to upstream CDS." /codon_start=1 /transl_table=11 /product="putative exopolysaccharide production protein" /protein_id="YP_001709409.1" /db_xref="GI:170781077" /db_xref="GeneID:6156596" /translation="MTHPARLPLPERLPDLLGSARFSAALTHCILGTAVLSHALRSTV GWAGLVAIVAALVAMAAGSLAAKRGDWEWRGLLPISLLILVGWCAATLLWTAYQPDAV GGVLHLAASAFLAVYVGVVRDLIQIVRAAGDVLRLVLVSSLALEVLAGLLIDGPIPFL GIRGALERLGPIQGLLGERNALGIVALVAAVTFAVELSTRSVSRGRGVFSLVVALLVA SLTRSSVVLGTFLVLAVAALAMLGLRHLARQARPLANSAVLVLAAVVAVLVVAFRSPV LQVLQARPDYLQRVALWREMLRLIDLNTIEGWGFVGFWRRDAYPYTALDLVSRGAQET GRNAYLDLYLQAGLVGLALFAAFCALALGRSWVLTTTKRGVGYVWTPLVLVVLVVASL AESVTIVEWGWVLLVICAVKAAQGRSWRHGLPEQHRPG" gene complement(682513..683967) /locus_tag="CMS_0642B" /old_locus_tag="CMS0642B" /db_xref="GeneID:6156597" CDS complement(682513..683967) /locus_tag="CMS_0642B" /old_locus_tag="CMS0642B" /note="Tandem duplication suggested by similarity to downstream CDS." /codon_start=1 /transl_table=11 /product="putative exopolysaccharide production protein" /protein_id="YP_001709410.1" /db_xref="GI:170781078" /db_xref="GeneID:6156597" /translation="MGMPTASRRALRSFATFVLVTTFAGDMWRDSLSWWGFGAIALAV LVTCVTLLMRARPLPRVRVLPIPLLAFTGIAVLSIAWSQYRPESALGVLIQMSTSIAA LTLVVLLSWSEIVQGLGRAFRIILGLSLAFELFVAVVVRGPVMPFFTDYGPRAPAAFA WTRGEILSGGRIQGVVGNANLLAMVALLGLIVFSLQYAARTVRRRDSGLWILVALLTL TLTGSSTVLVALMMTGIVAVLALVARRVGIRGRLVLAGGVVVAAVVGAGIVATRTAEV FELLGRSPDLTGRFQIWESVLGLAQQHPVVGWGWIGYWAPWVHPFQGLAVRSGVTYLQ AHDAYLDVLLQVGAIGLLAFACFVVTTYVRSWWAAIDRPQQRRDRVEPYSTLALAPLL LMTALVVQSLAESRLLYEGNWLLLVVIAIVTKSGMVAREDVPGPAASRRRPVPSEAVA PAPGAPSPRSGAALPAPAPVPSAPAPAAVDPRVA" gene complement(684061..685239) /locus_tag="CMS_0642C" /old_locus_tag="CMS0642C" /db_xref="GeneID:6156598" CDS complement(684061..685239) /locus_tag="CMS_0642C" /old_locus_tag="CMS0642C" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /protein_id="YP_001709411.1" /db_xref="GI:170781079" /db_xref="GeneID:6156598" /translation="MSLTPLIGDFYGYESRLGEREKESLADLRAYLEAEVKPHVNGLW ARAEFPRHVVGGLAERGLFGMPFPETRPFENSAVYRGWAALELGRVDASIATLVGMQS GLVMGSVAVAGSPEQRAEWLPRFASGEILGSFGLTEPLSGSDSARGLRTIATRRGDEW SITGSKRWIGNGTVSDVTVIWAKDADDGQVKGFLVPNDSPGFRATRIEDKQALRIVQN ADIELDGVIVPDANRLQNGTSFADTAAVLRLTRAEVAWAAIGISIGAYEAAVAYTGER VQFGKPLGAHQLIQDLLVRSLGNITASIGLVTRASEMVDEGTQSDEHSALAKAYATSR MRETVAWCREAFGGNGIVLDYDVARFFADAEAIYSYEGTREMNTLIVGRAITGHAAFV" gene 685405..686712 /gene="manA" /locus_tag="CMS_0643" /old_locus_tag="CMS0643" /db_xref="GeneID:6156599" CDS 685405..686712 /gene="manA" /locus_tag="CMS_0643" /old_locus_tag="CMS0643" /EC_number="5.3.1.8" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase" /protein_id="YP_001709412.1" /db_xref="GI:170781080" /db_xref="GeneID:6156599" /translation="MFTSLANTPRDYAWGSTTAIAELLGRDPSGGPEAELWLGAHDGS PTRVVDPASAGGATTLVEWIQADPETTLGPLAHGLRPGDGPGLPFLLKVLAADGPLSL QAHPDLHRARLGFRHEEERGIPVDAPHRNYKDPLHKPELIFALSDEFHALCGFRPLAE VRDVFTLLLTLDASGPDSDPAVIRTVLSRLTGSEADVLRDVFAFLMGGGSEVRRLVDR VTLLANLASDRQCREFSTEMRTVRELAAAYPGDPGIVTSLLLNRVTLRRGEALYLPAG NIHAYLHGLGIELMAASDNVLRGGLTPKHVDVPELLDVLEFQALPVPYLEPERTAPGV DLYRPDVPDFLLAHVSPATRDAADGDGGASVVTVDGPAILLCTSGEMTVCGEVSTVVV RRGDAVYVTPDEGRLVVTGEGEAFLATTPAPAAAADGRDGDGA" misc_feature 685417..686568 /gene="manA" /locus_tag="CMS_0643" /old_locus_tag="CMS0643" /inference="protein motif:HMMPfam:PF01238" /note="HMMPfam hit to PF01238, Mannose-6-phosphate isomerase, type I, score 3.4e-53" gene 686747..687715 /locus_tag="CMS_0644" /old_locus_tag="CMS0644" /db_xref="GeneID:6158800" CDS 686747..687715 /locus_tag="CMS_0644" /old_locus_tag="CMS0644" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="YP_001709413.1" /db_xref="GI:170781081" /db_xref="GeneID:6158800" /translation="MTWLVTGGAGYIGSHIVSAFARAGIDTVVLDDLSSGHEAFVPDG VPFHRGSVLDRELLARVLGSGDIRGVVHVAGYKYPGVSVRRPLHTYEQNVTATAVLLQ EMERAGVDSIVFSSSAAVYGTPHVDLVDERTPKAPESPYGESKLIGEWLLRDQGVAAG LRHASLRYFNVVGSGEEGYFDTSPHNLFPLVFDALLDGRSPRIYGSDYPTPDGTCVRD YIHVVDLAASHVAAARRLEAGEPVEPVYCLGSGAGVSVREIMTAIASATGIAFEPEVE DRRPGDPARIVASGELAARDIDWAMRHSLDDMVTSAWDARQAGTAV" misc_feature 686753..687706 /locus_tag="CMS_0644" /old_locus_tag="CMS0644" /inference="protein motif:HMMPfam:PF01370" /note="HMMPfam hit to PF01370, NAD-dependent epimerase/dehydratase, score 1.4e-87" gene complement(687726..688688) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /db_xref="GeneID:6156600" CDS complement(687726..688688) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709414.1" /db_xref="GI:170781082" /db_xref="GeneID:6156600" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(687738..688280) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(688365..688430) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(688430..688551) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(688551..688616) /locus_tag="CMS_0645" /old_locus_tag="CMS0645" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 688939..689256 /locus_tag="CMS_0646" /old_locus_tag="CMS0646" /db_xref="GeneID:6156601" CDS 688939..689256 /locus_tag="CMS_0646" /old_locus_tag="CMS0646" /codon_start=1 /transl_table=11 /product="WhiB family transcriptional regulator" /protein_id="YP_001709415.1" /db_xref="GI:170781083" /db_xref="GeneID:6156601" /translation="MALPEYHAGVPDDWFVDPVRLGVPGVRSVDDGNPLAWQADSLCA QTDPEAFFPEKGGSTRDAKKICGSCEVRSECLEYALENDERFGIWGGLSERERRKLRK RAV" misc_feature 689047..689238 /locus_tag="CMS_0646" /old_locus_tag="CMS0646" /inference="protein motif:HMMPfam:PF02467" /note="HMMPfam hit to PF02467, Transcription factor WhiB,score 3.5e-37" gene 689350..692439 /locus_tag="CMS_0647" /old_locus_tag="CMS0647" /db_xref="GeneID:6156602" CDS 689350..692439 /locus_tag="CMS_0647" /old_locus_tag="CMS0647" /codon_start=1 /transl_table=11 /product="putative integral membrane glycosyl transferase" /protein_id="YP_001709416.1" /db_xref="GI:170781084" /db_xref="GeneID:6156602" /translation="MQPRVTAILVAHEGAQFLDRTIQGLAAQTRRPDRVVAVDFGSRD GSAALLAASDPTRMVQAPARMTLGQAVDQAVRVIPAPDGDHEFLWLLSADNAPAPDAL ERLLAAIEASPSVAVAGPKLMEWDHPGYIHELGSTLTTLGAAVPVVDVELDQAQYDDM SDVLGVAAGGMLVRHRLWDELGGFDDALPVIDDALDLCVRARLAGHRVVVVPAARVAS AGDAAPGTAFLGKRTPRRRRRRLRRQAQLHRRLSYAPPAAVPFHWLSLVPLAILRALL QLLRKRPTAAPGEIGAAVRVAVAPGRIRASRRRLAAARTAPWSSIASLRQPLAVGRRR RSLAREQYRVEHMGVSDGVEFLATGGGWTVLAALVLSAVMWLPRLTGTALVGGQLLPL GPSAGALWAQVGIGVRGSGAGPVAPSDPFAYVLAVLGSVTAWEPSLAVLGLFVAALPL AALAAWLCAAQLTRNAWLRALAALVWTLAPTLLIALGDGRLPAVLAHLLLPWLALAVL RAPRSWSASAVAGILMAAVGASAPSLVPAVLVLWLVATVRAGRRAGRLVTIPVPLLAL VAPLVAYRVMQGQPLALAADPAVPASFTPADVPGLALGFPTAGLGGWSAFVDGLGTGL PAAVPLIVVAVLVAPLVLGAVAALFLRGSHRAALALGVTVLGFATAVLAARTVVQSAG SEVVAVWPGSGLSLLWLGLAGALVLGFATLGRRSVVPGLVAAVTLVVLALPIVSAAVA GSTAVRATTDTSLPGLVVAEAATDPDVGTLVLRAADDGSLSADVERGAGRTLEQVATV DSTIGPLSDTQTRVAELAGNISSRSGLDATDDLRALGVSYVLLQTPAGDAEAAVNDRA RSALDDDPVFTAVGQTEAGLLWRFVGSDDLVAQVAGPGNLDDPGRAAVLAAQALVFAL TLLLAIPTGGLAARSRPLPAYREPVVGSDARPADAEEPRPAHDDRGTPAYIDEPTGQA VEAAPFGDIPQAGERPAGDDGEGDGDGGDVAPAPAADQDDDRSRGADDDRRRTDGQA" misc_feature 689365..689895 /locus_tag="CMS_0647" /old_locus_tag="CMS0647" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 3.5e-10" misc_feature order(690412..690480,690499..690567,690661..690729, 690742..690810,690913..690981,691015..691083, 691228..691296,691315..691383,691411..691479, 691498..691566,692059..692127) /locus_tag="CMS_0647" /old_locus_tag="CMS0647" /note="11 probable transmembrane helices predicted for CMS0647 by TMHMM2.0 at aa 355-377, 384-406, 438-460,465-487, 522-544, 556-578, 627-649, 656-678, 688-710,717-739 and 904-926" gene 692426..693943 /locus_tag="CMS_0648" /old_locus_tag="CMS0648" /db_xref="GeneID:6156603" CDS 692426..693943 /locus_tag="CMS_0648" /old_locus_tag="CMS0648" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709417.1" /db_xref="GI:170781085" /db_xref="GeneID:6156603" /translation="MARRDAVRIATRVTTGIAGVAVLGLVVTGALLLPPAPSDASAPS VLVTPVATDQQRVCPGGLLRPPAADAASSTTAIAVGSAVVTSGSATTGTTGSAPAVRT SSIQAPEVQGAASSAPSVLAVAGAVDDAPTDLAGAASEVATEADLAGLAAASCSEATA DAWLVGGATTTGRTTFVVLDNPSGVSSTVDLAITGEDGAVSAPGASGISVPAGGRRVL SLAGLAPDLASPVVHVESRGGQVVARLEQSTVRGLLAGGVDWIGPSAAPSTALTMTGL RIDSQAAPVAPVEGGDAPPAAEGGATPGAGSDGGADPDLVTAVRIAVPGSDDADVSVS VAPEEGTDGTGTTFTIQADAGRTIDVPVSDLSDGRYSVTVQSSVPVTAAVRSVSGAAE GGATDFAWLPSAEALTRDALVSVPAGPAPLLHLRNAGDQAAAVTARPTDGSASVSLDV PAGSEVSAAVEAGRTYLLEGAAGLTATVTLAEPGRSAALPVVPVLPAADPLRVHP" sig_peptide 692426..692551 /locus_tag="CMS_0648" /old_locus_tag="CMS0648" /note="Signal peptide predicted for CMS0648 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.449 between residues 42 and 43" misc_feature 692462..692530 /locus_tag="CMS_0648" /old_locus_tag="CMS0648" /note="1 probable transmembrane helix predicted for CMS0648 by TMHMM2.0 at aa 13-35" gene complement(694056..694499) /locus_tag="CMS_0649" /old_locus_tag="CMS0649" /db_xref="GeneID:6156604" CDS complement(694056..694499) /locus_tag="CMS_0649" /old_locus_tag="CMS0649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709418.1" /db_xref="GI:170781086" /db_xref="GeneID:6156604" /translation="MPRSRRRGGHVSIRGSWRDRHGRGLRSPVTGPELPVLRTRADVF DQTIASAAEYLRGLWPDELERVSFEVAALPADNSERDGIDRWSVLADERRVIFYRLPI ERLAHLHEDDEYHQRALVEGCVYRAVAELLGKDPWDLAPDRYDPH" gene 694545..694766 /locus_tag="CMS_0650" /old_locus_tag="CMS0650" /db_xref="GeneID:6156605" CDS 694545..694766 /locus_tag="CMS_0650" /old_locus_tag="CMS0650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709419.1" /db_xref="GI:170781087" /db_xref="GeneID:6156605" /translation="MTNRPCSRVGCTGVATTTLTYVYADSMAVLGPLSHDSEPHSYDL CDRHAARLSAPQGWQIVRHGVLGEVGFGA" gene 694799..696190 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /db_xref="GeneID:6156606" CDS 694799..696190 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /EC_number="5.4.2.8" /note="converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells" /codon_start=1 /transl_table=11 /product="phosphomannomutase/phosphoglucomutase" /protein_id="YP_001709420.1" /db_xref="GI:170781088" /db_xref="GeneID:6156606" /translation="MKTYDVRGLVGSQLTEELVTALGAGFVDELGAAGSEVVVGHDMR DSSPAFAQAFARGATARGGNVLLIGLCSTDETYFASGSLDAPAVMFTASHNPATYNGL KFSRAGAQGISLDTGLAAIRDRAIGFLSDGIAPVEPAGEVRERDVLADYAGYLRQLVD LSGIRPLRVVVDAGNGMGGMTVPAVLGTAAGLPELPIEIIPLYFELDGTFPNHEANPL EPANLVDLQKAVVEHGADLGLAFDGDADRCFVVDEKGRAVTPSAVAAIVALREISRVK AQSPGDDVTVLHNLITSRIVPETIEAAGATAVRTRVGHSLIKDQMAATGAVFGGEHSA HYYFRDFWGADNGMLAAMHLLAEFGQTDGLMSDLSARYTPYALSGEINSTVDDVPAAY ERIVEAFRGRGEFDELDGLTVDGPVGDDGAFWWFSVRPSNTEPLLRLNVEASTEEKMA ALRDELLGLIRGA" misc_feature 694799..695194 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /inference="protein motif:HMMPfam:PF02878" /note="HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, score 2.2e-36" misc_feature 695243..695569 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /inference="protein motif:HMMPfam:PF02879" /note="HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, score 1.9e-36" misc_feature 695573..695923 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /inference="protein motif:HMMPfam:PF02880" /note="HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, score 1.1e-15" misc_feature 695936..696184 /gene="manB" /locus_tag="CMS_0651" /old_locus_tag="CMS0651" /inference="protein motif:HMMPfam:PF00408" /note="HMMPfam hit to PF00408,Phosphoglucomutase/phosphomannomutase C terminal, score 7.7e-07" gene 696324..696614 /locus_tag="CMS_0652" /old_locus_tag="CMS0652" /db_xref="GeneID:6158801" CDS 696324..696614 /locus_tag="CMS_0652" /old_locus_tag="CMS0652" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709421.1" /db_xref="GI:170781089" /db_xref="GeneID:6158801" /translation="MAAMVGYSEGKDDILKRLRRAEGQVRGIERMVESDTYCIDVLTQ VSAVTRAMETVALKLLDDHLAHCLAEAAREGGQVADDKVREASAAIARLVRS" misc_feature 696414..696605 /locus_tag="CMS_0652" /old_locus_tag="CMS0652" /inference="protein motif:HMMPfam:PF02583" /note="HMMPfam hit to PF02583, Protein of unknown function DUF156, score 6.8e-22" gene 696659..696874 /locus_tag="CMS_0653" /old_locus_tag="CMS0653" /db_xref="GeneID:6156607" CDS 696659..696874 /locus_tag="CMS_0653" /old_locus_tag="CMS0653" /codon_start=1 /transl_table=11 /product="putative heavy metal binding protein" /protein_id="YP_001709422.1" /db_xref="GI:170781090" /db_xref="GeneID:6156607" /translation="MTTTTFPVTGMTCAHCVASVTEEVGELPGVASVAVDLVVGGAST VTVESDAPLDPAALRAAVDEAGYVAGL" misc_feature 696671..696871 /locus_tag="CMS_0653" /old_locus_tag="CMS0653" /inference="protein motif:HMMPfam:PF00403" /note="HMMPfam hit to PF00403, Heavy metal transport/detoxification protein, score 1.8e-10" misc_feature 696680..696769 /locus_tag="CMS_0653" /old_locus_tag="CMS0653" /note="PS01047 Heavy-metal-associated domain." gene 696876..699344 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /db_xref="GeneID:6156608" CDS 696876..699344 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /codon_start=1 /transl_table=11 /product="putative metal transporter ATPase" /protein_id="YP_001709423.1" /db_xref="GI:170781091" /db_xref="GeneID:6156608" /translation="MADPASGSAAEEGASGADGAPAEEGAVLTRVDLDVQGMTCASCA MRIERKLGRMPGVEAAVNYATHRARVQLPAGTSVADAIRTIERTGYRASERAGWGSGA ADGMPGSAAVPSAPASAPASDERAPVAVAAPRVRPDAPDAAASDPAPPPAPTDAPTRD AVAARRPDADELALRQRLVVSAALTVPVFLMAMIPALQFDDWQWLSLTLAAPVAVWGA WPFHRSAAVSARHGGVGMDTLVSIGVAAAFLWSLYALFLGDAGEPGMRMTMSLVSEPG GGSGDVYLEVAAAVTVFLLGGRYLEARAARASGAALAALLDLAAKDVAVVRDGVETRI PIRELRVGAEFVVRPGERIATDGVVVDGSSAVDRSLLTGESLPVEVGPGDDVTGATLN AGGRLLVRATRVGEETRLARMAALVEEAQTGKARIQRLADRVSAVFVPVVLVLAAGTL VGWLLLGFPPEAAFTAAVATLIIACPCALGLATPTALLVGTGRGAQLGILITGPEVLE STRRIDTVLLDKTGTVTTGVMSLVRAVPAAGVDADELVRLAAALEQRSEHPVARAVVE TAGTGSVPAVEGFVATPGLGVHGVVDGRAVAVGRPSWLAEQWAARPGAPLAEALDEAE AEGSTVVAVAWDGAVRGILAVADTLKPTSAEAVRRLRALDLRPVLLTGDTAGAAHRVA AEAGIDEVIAGVLPEGKLEAVRRLQAEGRVVAMVGDGVNDAAALAQADLGIAMGTGTD AAIEAGDITIVRGDLVLVADAVRLARRTLGTIRGNLFWAFAYNAAAIPVAMLGLLNPL VAGLAMALSSVFVVTNSLRLRSFR" misc_feature 696969..697157 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /inference="protein motif:HMMPfam:PF00403" /note="HMMPfam hit to PF00403, Heavy metal transport/detoxification protein, score 1.8e-11" misc_feature 696978..697064 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /note="PS01047 Heavy-metal-associated domain." misc_feature order(697407..697466,697479..697532,697590..697649, 697707..697775,698175..698243,698271..698339, 699201..699260,699270..699329) /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /note="8 probable transmembrane helices predicted for CMS0654 by TMHMM2.0 at aa 178-197, 202-219, 239-258,278-300, 434-456, 466-488, 776-795 and 799-818" misc_feature 697740..698402 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /inference="protein motif:HMMPfam:PF00122" /note="HMMPfam hit to PF00122, E1-E2 ATPase-associated region, score 2e-85" misc_feature 698430..698450 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /note="PS00154 E1-E2 ATPases phosphorylation site." misc_feature 699021..699089 /locus_tag="CMS_0654" /old_locus_tag="CMS0654" /note="PS01229 Hypothetical cof family signature 2." gene 699407..700891 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /db_xref="GeneID:6156609" CDS 699407..700891 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /EC_number="3.3.1.1" /note="catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine" /codon_start=1 /transl_table=11 /product="S-adenosyl-L-homocysteine hydrolase" /protein_id="YP_001709424.1" /db_xref="GI:170781092" /db_xref="GeneID:6156609" /translation="MTLLPEATSTALPFRVADLSLAESGRHQIRLAENEMPGLMALRE EFGASQPLAGARIAGSIHMTVQTAVLIETLTALGAQVRWASCNIFSTQDEAAAAVAVG AGTPEAPAGVPVFAWKGETLEEYWWCTEQIFDWSGEAQAADADWTGPNMILDDGGDAS LLVHKGREYELAGAVPETPEDASHEYRVILDTLRRSLAASSDRWTRRAADIQGVTEET TTGVHRLYELARDGELLFPAINVNDSVTKSKFDNKYGIRHSLPDGLNRATDTLIGGKV AFVVGYGDVGKGAAEALRGQGARVIVSEVDPICALQAAMDGYQVAKLSSVIETVDILV TGTGNVDVVRVDDIERMKHQAIIANVGHFDNEIDMAGLERLPGVEKVEIKPQVHEWRL PSGRSVLVLSEGRLMNLGNATGHPSFVMSNSFTNQVLAQIELYVRNEQYPIGVYVLPK HLDEKVARLHLDALGVELTELRPEQAAYIGVPVEGPYKVDHYRY" misc_feature 699440..700885 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /inference="protein motif:HMMPfam:PF05221" /note="HMMPfam hit to PF05221, S-adenosyl-L-homocysteine hydrolase, score 6.7e-154" misc_feature 699659..699703 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /note="PS00738 S-adenosyl-L-homocysteine hydrolase signature 1." misc_feature 700160..700648 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /inference="protein motif:HMMPfam:PF00670" /note="HMMPfam hit to PF00670, S-adenosyl-L-homocysteine hydrolase, score 8.4e-100" misc_feature 700226..700276 /locus_tag="CMS_0655" /old_locus_tag="CMS0655" /note="PS00739 S-adenosyl-L-homocysteine hydrolase signature 2." gene complement(700985..701854) /locus_tag="CMS_0656" /old_locus_tag="CMS0656" /db_xref="GeneID:6156610" CDS complement(700985..701854) /locus_tag="CMS_0656" /old_locus_tag="CMS0656" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709425.1" /db_xref="GI:170781093" /db_xref="GeneID:6156610" /translation="MAAADAHDPIISDGPDALVVGEAVALDVRPAGFVLRAAGAAIDV VASLAVGLLLVLLIGRLAGAGLLDAASSAACAIAAVVLAIVVMPVVVEVASRGRSLGR WAVGARIVRADGGGIGLRHAVARALVGILEVYLTLGGLAALVGLLSPRAQRLGDLVAG TRSQHERVPAYPAPLPPVPPHLVAWASEADVGRLPDALGRRLARFLSQREAMTPASRA RLAAELADEAAVHVSPLPATDPESFVAAVGAVRREREHRALMLERDRMASLEPILAGL PHGFPARGGSTPS" misc_feature complement(701360..701767) /locus_tag="CMS_0656" /old_locus_tag="CMS0656" /inference="protein motif:HMMPfam:PF06271" /note="HMMPfam hit to PF06271, RDD, score 2.8e-19" misc_feature complement(order(701411..701479,701582..701650, 701678..701746)) /locus_tag="CMS_0656" /old_locus_tag="CMS0656" /note="3 probable transmembrane helices predicted for CMS0656 by TMHMM2.0 at aa 37-59, 69-91 and 126-148" gene 702360..702800 /locus_tag="CMS_0658" /old_locus_tag="CMS0658" /db_xref="GeneID:6156611" misc_feature order(702360..702428,702507..702575,702636..702704, 702732..702800) /locus_tag="CMS_0658" /old_locus_tag="CMS0658" /note="4 probable transmembrane helices predicted for CMS0658 by TMHMM2.0 at aa 57-79, 106-128, 149-171 and 181-203" gene complement(702920..705478) /locus_tag="CMS_0659" /old_locus_tag="CMS0659" /db_xref="GeneID:6156612" CDS complement(702920..705478) /locus_tag="CMS_0659" /old_locus_tag="CMS0659" /EC_number="3.2.1.21" /codon_start=1 /transl_table=11 /product="putative beta-glucosidase" /protein_id="YP_001709426.1" /db_xref="GI:170781094" /db_xref="GeneID:6156612" /translation="MSTRHEQDRPDTDVPRGAPMDPHATDPHATDPHAATPLDPEAAR LEQLAARLTLEQKVQLITGRDFWTTWPVEGIGLRRMLVSDGPSGVRGEVWDERSPSLN LPSASALSSSWDTGIAARYGRASAVEARRKGVDVVLGPTINLHRSPYGGRHFEAFSED PLLTADLAAAYVAGVQENGVGATPKHYVANEYETDRFTADSVVSERALRELYLAAFEK AVVESRAWLVMSSYNSINGTTSTENDLLETPLNSEWGFDGVVVSDWTGVRSVDAARAS QDLEMPGPVGAWGDALLAAVRDGRVPESDVDRKVVRLLRLAARVGALEGFDAVVPAPV EVEDGVAFARTAAAAGAVLVRNEDAALPLDASALRSVAVIGHNAVEARTQGGGSATVI PEHVVTPLDGILEALGDGVEVRYARGAVVQKGIQELPLAEIVNPRTGEPGALVRFLDA DGAEMFAEDRRATTLMYFGGDAPTGTAAVIEITARWTPAATGEVLFGFSATGRGRVYA DGRLLREDGAAPVGMDLGASLMSPPSISAPLQTTAGETVDLRVEFELTSMPGGLAGIL GITVGLEADESAPDRLLDEAVEAATGADVAILVVGTNAQVESEGFDRDSLALPGRQDE LVRRVAAANPRTIVVVNSGSPVLLPWRDDVQAVLLAWFGGQEFGGALADVLFGDVEPG GRLPTTWPATEENVPVRSVTPVDGKVVYDEGIHVGYRAWLRSGATPAYEFGHGLGYTT HALDDLRVAEDGAGGITATVTVANTGDRAGKQVVQAYLSREGSAVDRPVRWLAGFASV ELAAGASADVDIAIGARTFAHWDGGWQREPGAFRLHVGTSVSATPLEAEVDPAA" misc_feature complement(703325..704428) /locus_tag="CMS_0659" /old_locus_tag="CMS0659" /inference="protein motif:HMMPfam:PF01915" /note="HMMPfam hit to PF01915, Glycoside hydrolase, family 3, C-terminal, score 3.4e-82" misc_feature complement(704633..705274) /locus_tag="CMS_0659" /old_locus_tag="CMS0659" /inference="protein motif:HMMPfam:PF00933" /note="HMMPfam hit to PF00933, Glycoside hydrolase, family 3, N-terminal, score 3e-80" gene complement(705475..706809) /locus_tag="CMS_0660" /old_locus_tag="CMS0660" /db_xref="GeneID:6156613" CDS complement(705475..706809) /locus_tag="CMS_0660" /old_locus_tag="CMS0660" /codon_start=1 /transl_table=11 /product="putative sugar transporter" /protein_id="YP_001709427.1" /db_xref="GI:170781095" /db_xref="GeneID:6156613" /translation="MLPSCRSADEGGREPGGTVADAVRDQQTEGASRARSGRPGGARP PGSRRAEIGMPIALLGLFVALLPPIIVSLALKVAEIAPDDTAGTLSLVLGLGALVALV VNPLAGRLSDRTPGRFGMRRPWIIGGVVLGYGALILLTQATTVLALVGAWMLVQGCFN AAIAALIAVMADSARPRNRGRVAAAIGVAQNGSLVVGTFIVQLFTTTTQQVLVPGAIG VAVVVVFALVFHDRVLTERPTARLSVKELLGSFVFDPRRNPDFGWAWLMRFLLTASAV TATNYLAFYLIDDLGVAQADVANAVFVATLFNVIGVVSTTFVAGWLSDRLGRRKVFVA AAALVAVIGLVILALAPSLAVVYVAQLVIGAGIGSFYAVDLALITDVLPSDSDNGKDL GVVNIAQALPQSLVPTAASGVVGIAGYPGLFIAGAAAGLLGAVAAFRVKGVR" misc_feature complement(order(705496..705564,705661..705729, 705748..705816,705844..705912,705949..706017, 706120..706179,706198..706266,706309..706377, 706390..706443,706486..706554,706588..706656)) /locus_tag="CMS_0660" /old_locus_tag="CMS0660" /note="11 probable transmembrane helices predicted for CMS0660 by TMHMM2.0 at aa 52-74, 86-108, 123-140, 145-167,182-204, 211-230, 265-287, 300-322, 332-354, 361-383 and 416-438" misc_feature complement(705565..706641) /locus_tag="CMS_0660" /old_locus_tag="CMS0660" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature complement(705802..705855) /locus_tag="CMS_0660" /old_locus_tag="CMS0660" /note="PS00216 Sugar transport proteins signature 1." gene 706866..707501 /locus_tag="CMS_0661" /old_locus_tag="CMS0661" /db_xref="GeneID:6156614" CDS 706866..707501 /locus_tag="CMS_0661" /old_locus_tag="CMS0661" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709428.1" /db_xref="GI:170781096" /db_xref="GeneID:6156614" /translation="MAVDEGPRRYAKGAARRREILEAALALIAERGYSASSLQEIADA VGISKAGVLHYFESREALIAAVLEERDAHSVADFREAMPDRDPTDMVGMLLRASSHNG DTPGLVALYSRLVVDAAGAEHPAHAYIAGRYARVVGAVADQVRALDVELPAGLDPDSF ARVAVAVSDGLQLQWSYRPEIDMRDALERAIRALSGGVLPLPSADPAAAPA" misc_feature 706923..707063 /locus_tag="CMS_0661" /old_locus_tag="CMS0661" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2.7e-17" misc_feature 706971..707036 /locus_tag="CMS_0661" /old_locus_tag="CMS0661" /note="Predicted helix-turn-helix motif with score 1494.000, SD 4.28 at aa 36-57, sequence SSLQEIADAVGISKAGVLHYFE" gene complement(707562..708869) /locus_tag="CMS_0662" /old_locus_tag="CMS0662" /db_xref="GeneID:6156615" CDS complement(707562..708869) /locus_tag="CMS_0662" /old_locus_tag="CMS0662" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709429.1" /db_xref="GI:170781097" /db_xref="GeneID:6156615" /translation="MALTGRTVALLLLGIAPLVALGDGSDAAYALLAGWILLVAVLEA TDLALAASPRAVALERSLPARIRLDETGESVLLVTNRGSRTLRGVVRDAWQPSAGASS TRDRVRIPAGERRAIRLTLTPTRRGERRTERVTIRSAGPLGLAARQATLISPGAVRVL PPFRSRRHLPSRLARMRELDGRTALMVRGQGTEFDSLRDYVRGDDVRSIDWRATARRQ DVVVRTWRPERDRRVVLVLDTGRTAAGRIRDETRLDTAFEASLLLAALATRSGDRVDM VAHDRRVRARVRAGSGGDVVSRMVDALAPVDPELLETDWTAVPALVRRIVSQRSLVVL LTAVDSPGSSRALLQVLPQLTRTHHVLVAAVVDPGLAERAADRSGRAAVYRAAAAERA LLDVARVEAAVRRLGADVVTGAPADLPPALADRYIRLKATGRL" sig_peptide complement(707562..707642) /locus_tag="CMS_0662" /old_locus_tag="CMS0662" /note="Signal peptide predicted for CMS0662 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.685 between residues 27 and 28" misc_feature complement(708186..708500) /locus_tag="CMS_0662" /old_locus_tag="CMS0662" /inference="protein motif:HMMPfam:PF01882" /note="HMMPfam hit to PF01882, Protein of unknown function DUF58, score 2.2e-29" gene complement(708884..709847) /locus_tag="CMS_0663" /old_locus_tag="CMS0663" /pseudo /db_xref="GeneID:6156616" misc_feature complement(708896..709438) /locus_tag="CMS_0663" /old_locus_tag="CMS0663" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" /pseudo misc_feature complement(709709..709774) /locus_tag="CMS_0663" /old_locus_tag="CMS0663" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 39-60, sequence RPVSHVARELGVSRQCAHRWVA" /pseudo gene complement(709959..710912) /locus_tag="CMS_0664" /old_locus_tag="CMS0664" /db_xref="GeneID:6156617" CDS complement(709959..710912) /locus_tag="CMS_0664" /old_locus_tag="CMS0664" /codon_start=1 /transl_table=11 /product="putative regulatory protein" /protein_id="YP_001709430.1" /db_xref="GI:170781098" /db_xref="GeneID:6156617" /translation="MTDDLRTSLLAVRTEVGKAVVGQDGAVTGMIIALLARGHVLLEG VPGVAKTLLVRSLSQALRLDTARVQFTPDLMPGDITGSLVYDSREGAFSFRRGPVFTS ILLADEINRTPPKTQSALLEAMEERQVTVDGESHALPDPFLVAATQNPVEYEGTYTLP EAQLDRFLLKLVLDLPERDAEVEVLRRHCAGFDPRDLEAAGVRPVLDADGLHRAQAAV REVRVGADVLAYMVDLARATRRSPSVQLGVSPRGSTSLLAASRAWAWLSGFDAVTPDH VQEMVLPVLRHRIALRPEAELEGVSVDAVLRGVMAQVQVPI" misc_feature complement(710097..710798) /locus_tag="CMS_0664" /old_locus_tag="CMS0664" /inference="protein motif:HMMPfam:PF07728" /note="HMMPfam hit to PF07728, ATPase family associated with various cellular activities (AAA)" misc_feature complement(710406..710798) /locus_tag="CMS_0664" /old_locus_tag="CMS0664" /inference="protein motif:HMMPfam:PF07726" /note="HMMPfam hit to PF07726, ATPase family associated with various cellular activities (AAA)" gene complement(710909..712165) /locus_tag="CMS_0665" /old_locus_tag="CMS0665" /db_xref="GeneID:6156618" CDS complement(710909..712165) /locus_tag="CMS_0665" /old_locus_tag="CMS0665" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709431.1" /db_xref="GI:170781099" /db_xref="GeneID:6156618" /translation="MSAPMPAAAALATAATRTPRQALRRAGTWIALAALAVVVALASL AVSGAARQGDALAPDNPAPGGTQALARVLQGQGVEVTLATTLAEARASVGDGDDATLV LGATSDRLDDARLAEVGRLSTRTVLLAPDFRTLQAIAPDVAAGGAAESADRALDAACA LPAARAAGSVPDDAPVFRYLGDDASDAVTCFPDDTGDAFALLQVPATLAPGGTVTVLG ADPILTNGRIAEQGSAALALGVLGERPRLVWYTPSPDDAASDAPPTLGELTPGWVTPA ILLLGAAALAAAVWRGRRFGPLVVERLPVVVRADETAEGRARLYQRADARGHALDALR VGTVDRIASALALGRLASVDDVVGASAATLREDPAGIRALLLDDRPRTDRVLVDLAAR LADLERRVARAADPADPTDPTRRMDP" sig_peptide complement(710909..711061) /locus_tag="CMS_0665" /old_locus_tag="CMS0665" /note="Signal peptide predicted for CMS0665 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.281 between residues 51 and 52" misc_feature complement(712022..712090) /locus_tag="CMS_0665" /old_locus_tag="CMS0665" /note="1 probable transmembrane helix predicted for CMS0665 by TMHMM2.0 at aa 26-48" gene complement(712162..712848) /locus_tag="CMS_0666" /old_locus_tag="CMS0666" /db_xref="GeneID:6156619" CDS complement(712162..712848) /locus_tag="CMS_0666" /old_locus_tag="CMS0666" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709432.1" /db_xref="GI:170781100" /db_xref="GeneID:6156619" /translation="MTGSLLLAAVAHAAAVPVDPDADDARRLLLDELAKPEYEAARPN ALDLAAQAVGDWIADLLGGAGGGLADLAPVVIGVLVLAVVVVAFLVFGAPRRDRRRAA ARGDGLFGSDDRRSAEELRRAAEASRRAGDLAAAASDLFRAIAREQAERTIVAVDPGT TARGFARRAGSAHPAHAARLVGAADDFDAVRYLGRPGTEEMLDRLSALDRDLRTAVPV LHEPVGAGQR" sig_peptide complement(712162..712200) /locus_tag="CMS_0666" /old_locus_tag="CMS0666" /note="Signal peptide predicted for CMS0666 by SignalP 2.0 HMM (Signal peptide probability 0.952) with cleavage site probability 0.920 between residues 13 and 14" misc_feature complement(712570..712638) /locus_tag="CMS_0666" /old_locus_tag="CMS0666" /note="1 probable transmembrane helix predicted for CMS0666 by TMHMM2.0 at aa 71-93" gene complement(712845..714128) /locus_tag="CMS_0667" /old_locus_tag="CMS0667" /db_xref="GeneID:6156620" CDS complement(712845..714128) /locus_tag="CMS_0667" /old_locus_tag="CMS0667" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709433.1" /db_xref="GI:170781101" /db_xref="GeneID:6156620" /translation="MTDDQSWQAPGGAPSGQGGSPDPDRTRSDAGHAAPPPPGWPPAS PYAAPSAAPPGAGFPPPPGWGSAPGWTPPPKPGLLPLRPLGLGAILAGSFQTLRRNPG ATVGSALLIQGLVGVVTLVIVGGVTGFVVTRIFSAREADQGPLIAGGVTAVVIAALVT IVLSIVASAFLQGVVASEVARGTLGERLRMRALWRLARPRLVPLVLWSLSLTAAWTLV FGVLVGIVALLVLAGGGGIVAGILVGVLGVMGLVVVSAWVSTRLALVPSAIVIERLRP LAAARRSWSITIGSFWRVLGILLLTAVIVSAATNVVTIPLTLLTSILQGVLFPNGELD FQTFDASAVFYLGAQLLSLVVSVVVGSIGAVVTSANAAILYIDLRMRREGLDLELARF AEERAAGADSATGPDARDPYAAPAAGATTAGPGRA" misc_feature complement(order(713001..713069,713190..713258, 713355..713423,713451..713519,713628..713696, 713739..713807)) /locus_tag="CMS_0667" /old_locus_tag="CMS0667" /note="6 probable transmembrane helices predicted for CMS0667 by TMHMM2.0 at aa 108-130, 145-167, 204-226,236-258, 291-313 and 354-376" gene 714242..714922 /locus_tag="CMS_0668" /old_locus_tag="CMS0668" /db_xref="GeneID:6156621" CDS 714242..714922 /locus_tag="CMS_0668" /old_locus_tag="CMS0668" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001709434.1" /db_xref="GI:170781102" /db_xref="GeneID:6156621" /translation="MTARILVVDDDTALAEMIGIVLRTEGFEPSFCADGGQALAAFHE AKPDLVLLDLMLPGLDGIQVCDLIRAESGIPIIMLTAKSDTADVVKGLESGADDYIVK PFNPKELVARIRTRLRPAAAASPGLLQVGDLVVDVEGHEVRRGEDRINLTPLEFDLLH ALASRPQQVFTREMLLEQVWGYQYKADTRLVNVHVQRLRAKVEDDPDNPRIVMTVRGV GYRAGAAA" misc_feature 714248..714604 /locus_tag="CMS_0668" /old_locus_tag="CMS0668" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 7.8e-39" misc_feature 714677..714907 /locus_tag="CMS_0668" /old_locus_tag="CMS0668" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 1e-23" gene 714942..716561 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /db_xref="GeneID:6156622" CDS 714942..716561 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /codon_start=1 /transl_table=11 /product="putative two-component sensor kinase" /protein_id="YP_001709435.1" /db_xref="GI:170781103" /db_xref="GeneID:6156622" /translation="MWLVDWRSWPRRLVRIWSVSLQFRTVLITVALSGVTVLLIGVLM TQSISSDLFRQRLDTVLQQSNSATSRMQEQFTSSDASDQTELEQLRTQVFDELRGSAI NLSDFAFRRTPGTEARNVLQNASTADYVDSLLSADLRRAVGEGTGTQQWQSVAIPVGD QGSTSPGIVVGSSIDIPSAGRYELYLVYDLGDIQQTLDFVAGTILLAFLFLIVLIGAI AWLVVRLVVAPIRVAADTSQKLAAGQLEERLPVKGEDVIATLARSFNGMADSLQSQIT QLADLSQLQQRFVSDVSHELRTPLTTIRLAGGVLYDLREDFSPPAARSAELLHTQVER FETLLADLLEISRFDAGAVDLVTEPTNLVRLVEDSIEEFEGLAAQKGSELRLVAPGGY FDAEMDARRVRRIVTNLVGNAVDHGEGRPIVITVDSDRDAVALAVRDYGVGMTHEEMG HVFDRFWRADPSRQRTTGGTGLGLAISLEDTNLHHGWLQLWSRPGEGSCFRLTLPRRP DVPLEGSPVALPPDDPADDRADEEDARVPST" sig_peptide 714942..715088 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /note="Signal peptide predicted for CMS0669 by SignalP 2.0 HMM (Signal peptide probability 0.781) with cleavage site probability 0.417 between residues 49 and 50" misc_feature order(714999..715067,715536..715604) /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /note="2 probable transmembrane helices predicted for CMS0669 by TMHMM2.0 at aa 20-42 and 199-221" misc_feature 715551..715760 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 1.9e-17" misc_feature 715791..715994 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 7.9e-17" misc_feature 716130..716462 /locus_tag="CMS_0669" /old_locus_tag="CMS0669" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1.9e-37" gene 716680..718278 /locus_tag="CMS_0670" /old_locus_tag="CMS0670" /db_xref="GeneID:6156623" CDS 716680..718278 /locus_tag="CMS_0670" /old_locus_tag="CMS0670" /codon_start=1 /transl_table=11 /product="lipoprotein LpqB" /protein_id="YP_001709436.1" /db_xref="GI:170781104" /db_xref="GeneID:6156623" /translation="MSEGDPATVTDESGVSYQPDGPQAGDGPDDVIAGFVDAATSSAD QYGVARQFLSSDFASRWDPFASVVVWEGQAETSEEVDGTYSYSVTTIATVDGQGHYRE VGSDQETRLSFQLVQERGEWRIAKAPDGIALRSTYFREIFSAHALYFFDPTFSFLVPD LRFFVTRASQSVSTRIVKSLLQGPSPWLSQPAVVTAFPEGTQLASSAVTTASGTPQVD LSTEARAADGVTQQRMKLQLRLSLSNIPSVLDVQMLVDGTPLDVADLGGRGPVKDPQA ESRPLVLAQGQFGYLGGGDVVPLGTLGTRVTALGADAATLSADGRQAAVRNASGVWSV GDGDRDAVLLDTRPGLVAPSLDAQGYVWSTPASDPRGLVAWGPDGVGHPVAVSWTATG RVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDA TWVDELDVATLTLAPDGERQVELHQVGGPSKDMGSAADGVSITGANDESGLRVLTSAG ALLTPRGSTWQQTATGVSFVATKR" gene 718340..719164 /locus_tag="CMS_0671" /old_locus_tag="CMS0671" /db_xref="GeneID:6156624" CDS 718340..719164 /locus_tag="CMS_0671" /old_locus_tag="CMS0671" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709437.1" /db_xref="GI:170781105" /db_xref="GeneID:6156624" /translation="MIPAPRQPALSLSPSSLSSRVPSAVRSALLDALAVVAPVTCAGC GAPDRAVCPACRAAILALPVVRPLALPAVPSSGGREPARIVPVGCGSAYAPPWPALLS ALKEDGRTDAARALAATLVGAVRAAVAAAEREAGSAGARARPLDVIPVPSPAASLRRR GYAPVEVLLARAGIRPLRAPGVPGLRRHPLRFTRRPADQAGLGVAARAANVDGCLVAR TDLAGRQILVVDDVLTTGATLRETCRAIRAAGGDVVACAVLTAVPARSRDGLPRAR" misc_feature 718625..719152 /locus_tag="CMS_0671" /old_locus_tag="CMS0671" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 0.00017" misc_feature 719015..719053 /locus_tag="CMS_0671" /old_locus_tag="CMS0671" /note="PS00103 Purine/pyrimidine phosphoribosyl transferases signature." gene 719301..720008 /locus_tag="CMS_0672" /old_locus_tag="CMS0672" /db_xref="GeneID:6156625" CDS 719301..720008 /locus_tag="CMS_0672" /old_locus_tag="CMS0672" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709438.1" /db_xref="GI:170781106" /db_xref="GeneID:6156625" /translation="MIWRYVMDINITGRNAEITDRFRVYATEKADKIVQLAEKSISLD IKVSRHSEKSGGSAGDDRVEITLVGPGPVIRAESSAADKFAAFDLALGRMLERLRRAK DKKKIHRGNHRPLSLHEAATDGFAQIDLDPADAELIERVNGKSVAPVDQPVAEDDYCP VVIRTKVFPSQSMTVDQALEHMELVGHDFFLFIDAETDRPSVVYRRKGWDYGVIGLAD GEQELAGAGAGSRALRR" misc_feature 719322..719624 /locus_tag="CMS_0672" /old_locus_tag="CMS0672" /inference="protein motif:HMMPfam:PF02482" /note="HMMPfam hit to PF02482, Sigma 54 modulation protein/ribosomal protein S30EA, score 1.2e-14" gene 720208..723030 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /db_xref="GeneID:6156626" CDS 720208..723030 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /note="functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="YP_001709439.1" /db_xref="GI:170781107" /db_xref="GeneID:6156626" /translation="MASVLEKVLRVGEGRTLRKLQNYAKAVNQLEEDFTHLTDEELKN ETVELRERHANGESLDDLLPEAFAAVREASRRTLGLRHFDVQIMGGAALHLGNIAEMK TGEGKTLVATLPAYLNAIASRGVHVITVNDYLASYQSELMGRVFRALGMTTGVILAGQ TPQQRREQYAADITYGTNNEFGFDYLRDNMAWQASDMVQRGHFFAVVDEVDSILIDEA RTPLIISGPSAGDANRWFTEFANVAKRLVPEVDYEVDEKKRTVGVLETGIEKVEDHLG IDNLYESANTPLISFLNNSIKAKALFKKDKDYVVMNGEVLIVDEHTGRILMGRRYNEG IHQAIEAKEGVAVKAENQTLATVTLQNYFRLYKKLSGMTGTAETEAAEFMSTYKLGVV PIPTNRPMQRKDQSDLIYKNEKAKFEQVVEDIAERHAAGQPVLVGTTSVEKSEYLSKL LAKKGVRHEVLNAKNHAREAAIVAQAGHLGSVTVATNMAGRGTDIMLGGNAEFLAVAA MNARGLSPVETPEQYETEWDDVFAQVKAEVDEEAAKVIEAGGLYVLGTERHESRRIDN QLRGRSGRQGDPGESRFYLSLTDDLMRLFNNGAAASLMGRDSVPDDVAIESKVVSRAI RSAQGQVEARNAEIRKNVLKYDDVLNRQREAIYGDRRHILEGDDLQERSQRFLEAVID DVLDSHIGEGNGDDWDFDALWTELKTLYPISITIDEVITEAGSKGRVNRDFVRREILS DAKLAYSKREEQLGEAAMRELERRVVLSVIDRRWREHLYEMDYLKDGIGLRAMAQRDP LVEYQREGFALFQQMMGAIREETVGFLFNLEVEVQAPADAESVGPRIQAKGLAANQAT ADKLRYTAPTDDGGVEVRNQRGQIEKAATAKAQKDQQAEDAVLVGEDEPETPQGPPAR GAFGQPTGASSAPQNREERRKADRRK" misc_feature 720220..721359 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /inference="protein motif:HMMPfam:PF07517" /note="HMMPfam hit to PF07517, SecA DEAD-like, score 1.3e-149" misc_feature 720889..721227 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /inference="protein motif:HMMPfam:PF01043" /note="HMMPfam hit to PF01043, SecA preprotein cross-linking region, score 4.1e-60" misc_feature 721651..721698 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /note="PS01312 Protein secA signatures." misc_feature 722047..722697 /gene="secA" /locus_tag="CMS_0673" /old_locus_tag="CMS0673" /inference="protein motif:HMMPfam:PF07516" /note="HMMPfam hit to PF07516, SecA Wing and Scaffold,score 2.3e-90" gene complement(723144..723731) /locus_tag="CMS_0674" /old_locus_tag="CMS0674" /db_xref="GeneID:6158981" CDS complement(723144..723731) /locus_tag="CMS_0674" /old_locus_tag="CMS0674" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709440.1" /db_xref="GI:170781108" /db_xref="GeneID:6158981" /translation="MSEAVPREDLPDRRSAVARNAEGAPTRRSGARKPASTQSQATSA AVGSSSAAAPAPTATVRGTVRKRFDVDYFFGRQPCSSQDLPPSGPLLENLTRCVIEIL AGARELDQIARWVSDDVYRHLLKRVVLSARARRAKGQSVTRPVFTIGTVTSFSPRDGV IEAVIVVHGRARARAVAIRLEGLDRRWRATAINVL" gene 723938..724543 /locus_tag="CMS_0675" /old_locus_tag="CMS0675" /db_xref="GeneID:6156627" CDS 723938..724543 /locus_tag="CMS_0675" /old_locus_tag="CMS0675" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709441.1" /db_xref="GI:170781109" /db_xref="GeneID:6156627" /translation="MRWENLFDDLEGQWETARLAEERDQRAEEERVRVARTVMRDRLR ALISPDQARPLRLSLSDGTWIDLRAKVLGRDWLSGELTVPGDAPSPEERACILPIASI NALALDREQARSSLAPVSELPPERGIVDRIGLPFVLRDLCRRRARVELRLRDTVIGGT LDRVARDHVDIAVHEAGTPRRESAVSGYRLVPLAGIVLVRV" gene 724613..725251 /locus_tag="CMS_0676" /old_locus_tag="CMS0676" /db_xref="GeneID:6156628" CDS 724613..725251 /locus_tag="CMS_0676" /old_locus_tag="CMS0676" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709442.1" /db_xref="GI:170781110" /db_xref="GeneID:6156628" /translation="MPPTPRPARPARRPVWLDPRFVVGLVLVLVSTGGVVALLRSADS SVVVMAAASALDAGTTVHASDLVPVRVRIDGAADHYVSPDSADGLVVTRFVGAGELVP RSSLSSADARTTASVVIPTSAGADHLVAPGTVVDIWAAAVKGSGTNAYDAPRVIVSGA TVAQVIRPEGFVADQDHTQVQLTVPREDVAAVLASTDAGDQMSLVPVGDAGA" sig_peptide 724613..724762 /locus_tag="CMS_0676" /old_locus_tag="CMS0676" /note="Signal peptide predicted for CMS0676 by SignalP 2.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.267 between residues 50 and 51" misc_feature 724673..724729 /locus_tag="CMS_0676" /old_locus_tag="CMS0676" /note="1 probable transmembrane helix predicted for CMS0676 by TMHMM2.0 at aa 21-39" gene 725287..726843 /locus_tag="CMS_0677" /old_locus_tag="CMS0677" /db_xref="GeneID:6156629" CDS 725287..726843 /locus_tag="CMS_0677" /old_locus_tag="CMS0677" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709443.1" /db_xref="GI:170781111" /db_xref="GeneID:6156629" /translation="MEDALLRDVVEAGHAVLARVTGGAEVVAAVQATTIDPLHLVIAA SPATLDRDVLAALDDRGARAVAVASSEADRRNAQALGHHEVVDEGATWREIEELLLSV RPLGAAGGTASGVRRADAVAAHLEIAPPEHGDPGDSRDRARLPEAGTRRSAHGSDVRA DPSSGRDGTDGSSRPGTSSRTRPERDRRARPLRARLGLARRPRVPAPVVREQEPDDGR ERIGRVIAVRGPQGAPGRTTTALAIAGEVAAAGRSAVLVDADVHGGTVAATLGLLDEA PGFAAACRLAAADSLTVEELERIAQHHPSTRAPGFSVLTGISRPDRWPELAEGRVSAV LQACRGWRDYTVVDASFNLEDDEEISSDMFAPRRNAATHAVLRGADHVVAVVSADTVG LSRFFRAYVQLLEIVDPSRVSVLVNRVRPSAGGWDAAGQVRRTLFRFGSVEAVGYVPE DRESLDAAVLAGATLRDIAPRSPALVEWSRFTRTTLLPPEDAPRRVRRAAGSRRRGAD RAGEERARPA" gene 726853..728355 /locus_tag="CMS_0678" /old_locus_tag="CMS0678" /db_xref="GeneID:6156630" CDS 726853..728355 /locus_tag="CMS_0678" /old_locus_tag="CMS0678" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_001709444.1" /db_xref="GI:170781112" /db_xref="GeneID:6156630" /translation="MSTLSDLVHAQGLSSDADVEWLHLLVGDWQLLADLAFADIVLWV PTVSGSFVAVAHARPSSSATLFYRDFVGQPIKAEWRKQVTDAHETARIIDSSAPDWYE ETPTRVRAVPVLRRLAQGSPEVTDTPIAVITRHTNLSETRTPSRQELTFNECANDLFA MIADGDFPDLGSPTGPRRGAPRASDGLLRLDVDGITTFASPNALSAFNRMGFSEELEG ESLADATSSLLTGKRLTVDESLALIVAGRAPWRTDIESRGVTVSLRAIPIRSHGERVG AVVLCRDVTELRHQERELITKDATIREIHHRVKNNLQTVASLLRIQARRSHTEEAREA LGHAQRRVGAIAVVHDTLSEGLNQNVDFDAVFDRVLLLIAEVASAHNTRVHPKILGSF GVLPSAYATPLALALTELVTNAVEHGLAGRSGEVAIEAARTEETLTVSVRDDGVGLPE GKVGTGLGTQIVRTLIQGELSGTIDWHTLMGSGTEVTIEVPLRWLAPVTA" misc_feature 727759..728016 /locus_tag="CMS_0678" /old_locus_tag="CMS0678" /inference="protein motif:HMMPfam:PF07568" /note="HMMPfam hit to PF07568, Histidine kinase,dimerisation/phosphoacceptor, score 1.8e-28" misc_feature 728044..728331 /locus_tag="CMS_0678" /old_locus_tag="CMS0678" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2.1e-20" gene complement(728453..728701) /locus_tag="CMS_0679" /old_locus_tag="CMS0679" /db_xref="GeneID:6156631" CDS complement(728453..728701) /locus_tag="CMS_0679" /old_locus_tag="CMS0679" /codon_start=1 /transl_table=11 /product="WhiB family transcriptional regulator" /protein_id="YP_001709445.1" /db_xref="GI:170781113" /db_xref="GeneID:6156631" /translation="MDWRDKAACLTVDPELFFPVGNTGPAVDQIDKAKAVCGRCSVTE MCLQYALETGQDSGVWGGLSEDERRALKRRAARARRAS" misc_feature complement(728489..728695) /locus_tag="CMS_0679" /old_locus_tag="CMS0679" /inference="protein motif:HMMPfam:PF02467" /note="HMMPfam hit to PF02467, Transcription factor WhiB,score 4.1e-34" gene 729013..729378 /locus_tag="CMS_0681" /old_locus_tag="CMS0681" /db_xref="GeneID:6156632" CDS 729013..729378 /locus_tag="CMS_0681" /old_locus_tag="CMS0681" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709446.1" /db_xref="GI:170781114" /db_xref="GeneID:6156632" /translation="MILLTVLVALEALGMAGVTALLVVDLLTSTPSSLASAVALIALA ALAAVFLGAVVRGILRGRSWVRPAAVTWQVLQIAVGAGSLQGADARQDLGWGLIVPSV LVIVLLFTRSVLLATRRRD" sig_peptide 729013..729144 /locus_tag="CMS_0681" /old_locus_tag="CMS0681" /note="Signal peptide predicted for CMS0681 by SignalP 2.0 HMM (Signal peptide probability 0.979) with cleavage site probability 0.337 between residues 44 and 45" misc_feature order(729016..729084,729121..729189,729202..729261, 729289..729357) /locus_tag="CMS_0681" /old_locus_tag="CMS0681" /note="4 probable transmembrane helices predicted for CMS0681 by TMHMM2.0 at aa 2-24, 37-59, 64-83 and 93-115" gene complement(729402..729881) /locus_tag="CMS_0682" /old_locus_tag="CMS0682" /db_xref="GeneID:6156633" CDS complement(729402..729881) /locus_tag="CMS_0682" /old_locus_tag="CMS0682" /codon_start=1 /transl_table=11 /product="putative peroxidase" /protein_id="YP_001709447.1" /db_xref="GI:170781115" /db_xref="GeneID:6156633" /translation="MTETTRLEKGQPAPDFTLPDQDGSPVTLSDLRGQDVIVRFYPAA GTPGCTTQACDFRDSMDSLQGAGYRVLGISKDPQEDLARFREEQGLGFTLLSDPDLEV HRAYAAYGEKSLYGKKVTGVIRSTVVVDGEGRVTLPLYNVKATGHVASLRKKLGVDA" misc_feature complement(729420..729857) /locus_tag="CMS_0682" /old_locus_tag="CMS0682" /inference="protein motif:HMMPfam:PF00578" /note="HMMPfam hit to PF00578, Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, score 1.7e-28" gene 730036..730108 /locus_tag="CMS_r050" /old_locus_tag="CMSr050" /db_xref="GeneID:6156634" tRNA 730036..730108 /locus_tag="CMS_r050" /old_locus_tag="CMSr050" /product="tRNA-Lys" /note="codon recognized: AAG; tRNA Lys anticodon CTT, Cove score 68.77" /anticodon=(pos:730069..730071,aa:Lys) /db_xref="GeneID:6156634" gene 730390..730884 /locus_tag="CMS_0684" /old_locus_tag="CMS0684" /db_xref="GeneID:6159051" CDS 730390..730884 /locus_tag="CMS_0684" /old_locus_tag="CMS0684" /note="Contains an N-terminal domain in common with CarD from Myxococcus xanthus Q50887 but does not include the C-terminal DNA-binding domain so is unlikely to carry out the equivalent regulation role." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709448.1" /db_xref="GI:170781116" /db_xref="GeneID:6159051" /translation="MIFEVGETVVYPHHGAATITAVKTRTIKGVDKKYITLQIHQSEL VIDVPVDNAELVGLRDVIDSSGVEAVFDVLRGDVEEEAGNWSRRFKANTEKMGSGDVR RVSEVVRDLWRRDQDSGVSAGEKRMLAKARQILVSELALAQKSTDEEASVVLDGVLAQ SISA" misc_feature 730393..730725 /locus_tag="CMS_0684" /old_locus_tag="CMS0684" /inference="protein motif:HMMPfam:PF02559" /note="HMMPfam hit to PF02559, Transcription factor CarD,score 4e-25" gene 731009..731239 /locus_tag="CMS_0685" /old_locus_tag="CMS0685" /db_xref="GeneID:6156635" CDS 731009..731239 /locus_tag="CMS_0685" /old_locus_tag="CMS0685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709449.1" /db_xref="GI:170781117" /db_xref="GeneID:6156635" /translation="MREHPERPDHDGPLEQNPLQPAHGGLRIWIYVIAAVVVIAVVAF ALVRFATAGQNTPGPSSLGAVLHLAGAARALI" misc_feature 731090..731158 /locus_tag="CMS_0685" /old_locus_tag="CMS0685" /note="1 probable transmembrane helix predicted for CMS0685 by TMHMM2.0 at aa 28-50" gene 731455..732222 /locus_tag="CMS_0686" /old_locus_tag="CMS0686" /db_xref="GeneID:6156636" CDS 731455..732222 /locus_tag="CMS_0686" /old_locus_tag="CMS0686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709450.1" /db_xref="GI:170781118" /db_xref="GeneID:6156636" /translation="MRILRTRREAVRALLVAVAVVVVLAAVVVGAREAALGPDSGSGR LSAEVPDGAVVRTLAGAGLVGDGRIDLAAARGMTDAIPADGRERHPRYDRDAFGPAWA DTDGNGCDQRDDVLVRDLARASSSPADPGCTVVAGHLDDVYTGRGIDFTRGPRTSAAV QIDHLVPLSWAWQHGAWSWTDERRERLATDLDELQAVDGPTNQDKSDQGPGTWLPPDA AYRCLYVTRFAFIVSRYGLSIDDADRSAIDRVLQACA" sig_peptide 731455..731547 /locus_tag="CMS_0686" /old_locus_tag="CMS0686" /note="Signal peptide predicted for CMS0686 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.539 between residues 31 and 32" misc_feature 731491..731559 /locus_tag="CMS_0686" /old_locus_tag="CMS0686" /note="1 probable transmembrane helix predicted for CMS0686 by TMHMM2.0 at aa 13-35" gene 732376..732711 /locus_tag="CMS_0687" /old_locus_tag="CMS0687" /db_xref="GeneID:6156637" CDS 732376..732711 /locus_tag="CMS_0687" /old_locus_tag="CMS0687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709451.1" /db_xref="GI:170781119" /db_xref="GeneID:6156637" /translation="MPEHPHAHPVRGAWLVRVGDGPALGWVLRHRADLAAPFSYEVYA CGLGSDGLRVWVQRRESLNAAVAWVMQHDAELLAYGRRLRPDPAQPAARGDEDAAAPG EGDGGVGSR" gene complement(732722..734203) /locus_tag="CMS_0688" /old_locus_tag="CMS0688" /db_xref="GeneID:6156638" CDS complement(732722..734203) /locus_tag="CMS_0688" /old_locus_tag="CMS0688" /codon_start=1 /transl_table=11 /product="putative L-asparagine permease" /protein_id="YP_001709452.1" /db_xref="GI:170781120" /db_xref="GeneID:6156638" /translation="MAQDFSHEQEGYQHGLKPRQLQMIAIGGAIGTGLFLGAGGRLAS AGPALAIVFLICGVFAFFILRALGELVLHRPSSGSFISYAREFYGEKFAYAAGWMYFL NWATTAIVDVTAVALYMHYWSAFTAAPQWLLALIALAVVLALNLVAVKVFGEMEFWFA LVKVAALVVFLIVGIVWLAWSFPVTVGGAEVQTGWTVLQQNGGIFPQGLVPVVLVVQG VVFAYAAIELVGTASGETQDVEKVIPRAINSVVFRIAIFYVGSIVLLSLLLPYTAYSA DQSPFVTFFSSLGSPEVGAIAGSVMNFVVLTAAMSSLNAGLYSTGRVLHSMGMNGSAP KFTTVMSKGGVPFGGIMLTGSITLLGVGLNALVPKQAFEIVLNVAALGIVAGWATIIL CQMRLRTWAKQGKAKEPTFRLPGAPVTSWLTLAFLVSVLVLMAVDWPIGTLTVASLVI IIPLLVAGWYLQRDRILEIARVREGITGPFPVTGRDAADQRKR" misc_feature complement(732791..734146) /locus_tag="CMS_0688" /old_locus_tag="CMS0688" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 4.8e-128" misc_feature complement(order(732821..732889,732899..732967, 733025..733093,733103..733171,733259..733327, 733385..733453,733514..733582,733664..733732, 733757..733825,733838..733906,734012..734080, 734090..734143)) /locus_tag="CMS_0688" /old_locus_tag="CMS0688" /note="12 probable transmembrane helices predicted for CMS0688 by TMHMM2.0 at aa 21-38, 42-64, 100-122, 127-149,158-180, 208-230, 251-273, 293-315, 345-367, 371-393,413-435 and 439-461" misc_feature complement(733979..734071) /locus_tag="CMS_0688" /old_locus_tag="CMS0688" /note="PS00218 Amino acid permeases signature." gene 734351..734917 /locus_tag="CMS_0689" /old_locus_tag="CMS0689" /db_xref="GeneID:6156639" CDS 734351..734917 /locus_tag="CMS_0689" /old_locus_tag="CMS0689" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001709453.1" /db_xref="GI:170781121" /db_xref="GeneID:6156639" /translation="MARTHSPARRIRSWAPVIAAAAGALVLAGCTTDPGQPEPEATTP AASATPDAGAAPGGTASPEPTVTRAPGPPTEDELATCSTLAQVLPDSTKLVQALGDGK AVDPTLLDRVKQGDAALAGMAPENMKPLVASFSTIVDELEALRTGADTDGASLDTGQY LRATSAFLDYCLDDVGYVPPTATPAPAP" sig_peptide 734351..734512 /locus_tag="CMS_0689" /old_locus_tag="CMS0689" /note="Signal peptide predicted for CMS0689 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.889 between residues 54 and 55" misc_feature 734408..734440 /locus_tag="CMS_0689" /old_locus_tag="CMS0689" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(734945..736273) /locus_tag="CMS_0690" /old_locus_tag="CMS0690" /db_xref="GeneID:6156640" CDS complement(734945..736273) /locus_tag="CMS_0690" /old_locus_tag="CMS0690" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709454.1" /db_xref="GI:170781122" /db_xref="GeneID:6156640" /translation="MSAVFRSLRAPNYRIWFAGALVSNVGTWMQRTAQDWIVLTELTR YDATAVGIVMALQFGPMLLLSPYAGLIADRYDKRRVLMITQGAMAVLGLGLGLVVLSG RAELWHVYLFALLLGVASALDAPARQSFVSELVSDDDLSNAVALNSASFSAARMIGPA VAGVLIAGVGTGWVFLLNAVSFIAVLFALTRLRVGELRRPERVARSRGQLREGFRYIG GRPDIMVILVIVFLVGAFGYNFPIFTSTMASVEFGKGATEFGLLSSSLAVGSVAGALL SARRERPRIRLVFVGAALFGIATGLAAIAPTYLLFAGALVIVGVVSQTLMTSANSTVQ LTVEPRMRGRVMAVYMAIFVGGTPLGAPIVGWVANTWGPRAALMVGAASGIVAALIAI AWLVLHRHLRVSYRIHRTPHLLVTHDGDGRDRREDAREDIEADEAVARRT" misc_feature complement(734948..736270) /locus_tag="CMS_0690" /old_locus_tag="CMS0690" /inference="protein motif:HMMPfam:PF05977" /note="HMMPfam hit to PF05977, Bacterial protein of unknown function DUF894, score 6.4e-10" misc_feature complement(order(735083..735151,735179..735247, 735284..735352,735362..735421,735440..735508, 735536..735604,735707..735808,735896..735955, 735974..736033,736061..736129)) /locus_tag="CMS_0690" /old_locus_tag="CMS0690" /note="10 probable transmembrane helices predicted for CMS0690 by TMHMM2.0 at aa 49-71, 81-100, 107-126, 156-189,224-246, 256-278, 285-304, 308-330, 343-365 and 375-397" misc_feature complement(735167..736228) /locus_tag="CMS_0690" /old_locus_tag="CMS0690" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(736270..736692) /locus_tag="CMS_0691" /old_locus_tag="CMS0691" /db_xref="GeneID:6156641" CDS complement(736270..736692) /locus_tag="CMS_0691" /old_locus_tag="CMS0691" /codon_start=1 /transl_table=11 /product="putative MarR-family protein" /protein_id="YP_001709455.1" /db_xref="GI:170781123" /db_xref="GeneID:6156641" /translation="MSDSPDLSQSLRAGVMRLARRLRAEKADHELSDSQFVVLALLLR DGPTSPGRLAEIERVTAPSMNRTVNCLVEAGYAERSPAPDDGRRVTVSITDAGRTVVQ ETRRQRNAWLSLRLGELTAAERATLAEAASLLGRMAAA" misc_feature complement(736291..736602) /locus_tag="CMS_0691" /old_locus_tag="CMS0691" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 5.7e-23" gene 736879..737100 /locus_tag="CMS_0692" /old_locus_tag="CMS0692" /db_xref="GeneID:6156642" CDS 736879..737100 /locus_tag="CMS_0692" /old_locus_tag="CMS0692" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709456.1" /db_xref="GI:170781124" /db_xref="GeneID:6156642" /translation="MTHHDGTADAHDDDEKLGGEGTIPAGTTGVAAGHDGGNDHFEPE EDTPHPADEDGDGTAASCSSSGGCERWGG" gene 737157..738119 /locus_tag="CMS_0693" /old_locus_tag="CMS0693" /db_xref="GeneID:6156643" CDS 737157..738119 /locus_tag="CMS_0693" /old_locus_tag="CMS0693" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709457.1" /db_xref="GI:170781125" /db_xref="GeneID:6156643" /translation="MTHANAPFAPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSRRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 737229..737294 /locus_tag="CMS_0693" /old_locus_tag="CMS0693" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 737553..738095 /locus_tag="CMS_0693" /old_locus_tag="CMS0693" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" gene complement(738932..739867) /locus_tag="CMS_0694" /old_locus_tag="CMS0694" /db_xref="GeneID:6156644" CDS complement(738932..739867) /locus_tag="CMS_0694" /old_locus_tag="CMS0694" /codon_start=1 /transl_table=11 /product="putative macrolide-resistance protein" /protein_id="YP_001709458.1" /db_xref="GI:170781126" /db_xref="GeneID:6156644" /translation="MDLDRLAAWLRCPSCGADLHAVPPLVLRCDQGHAMDANKRGYVN LLAAGTRVTGDTAEMLAARGAFLDRGHYAPLIDALTEAVGTPVGPRSEAPMRAPLGSG AHRDGGLRVVDAGCGTGYYLRALLDAVPGSTGLAVDLSPAAVGIAVRGRLDVDGVVAD TWAPFPMRDGVADLVLDVFAPRNMPEFHRILTPHGRVVILAAGRQHLAELRATGRAVG VQEDKRERILEAAGPFFEPVSETHVHRVLSLSEDDVDRLLGMGPSAHHRSAPSVPSRP RDEAAVPPTGDAARHDITVDVMVHVLRRREVEAPS" gene complement(739985..741613) /gene="qcrB" /locus_tag="CMS_0695" /old_locus_tag="CMS0695" /db_xref="GeneID:6156645" CDS complement(739985..741613) /gene="qcrB" /locus_tag="CMS_0695" /old_locus_tag="CMS0695" /codon_start=1 /transl_table=11 /product="ubiquinol-cytochrome c reductase cytochrome b subunit" /protein_id="YP_001709459.1" /db_xref="GI:170781127" /db_xref="GeneID:6156645" /translation="MTTTADPTTTGATAPAAKSGGGLTAAATYLDERTSVSVAVKEFG RKIFPDHWSFMLGEVALYSFVVILLTGTWLTFFFNPSMAETHYAGSYAPLKGVEMSVA MSSSLDISFDIRGGLLMRQIHHWAALLFVASIGLHMLRIYFTGAFRKPRELNWFIGFV LFILAMAEGFTGYSLPDDLLSGNGLRIIDGMVKGIPVIGTWISFLLFGGEFPGTHIIP RLYTLHILLLPAILVAFLALHLLFVVVHKHTQFAGPGRTNENVVGVPVLPTFAAKAGG FFFVVFGVIVVMASFFTINPIWNYGPYDPSPVSAGTQPDWYIGFADGALRLVPPGLEF VLFDHTFSFNIILPITVLGLFIVLVALYPFIEAWITGDKREHHILDRPRNAPTRTAIG AAGVTFYAVLWSAASSDLIATHFKVSMEGVIHTLQALLILGPVIAYQVAKRICLALMK KDREIALHGVESGRIVKLPGGEFIEVHEQLDEYERWRLVSYDDYKPLMIRPDSRGRIT VNQRARAALSKWFFEDRISPVTTKDVERSHSDHH" misc_feature complement(order(740291..740350,740393..740461, 740519..740587,740720..740788,740885..740953, 741089..741157,741182..741250,741383..741451)) /gene="qcrB" /locus_tag="CMS_0695" /old_locus_tag="CMS0695" /note="8 probable transmembrane helices predicted for CMS0695 by TMHMM2.0 at aa 55-77, 122-144, 153-175,221-243, 276-298, 343-365, 385-407 and 422-441" misc_feature complement(740867..741523) /gene="qcrB" /locus_tag="CMS_0695" /old_locus_tag="CMS0695" /inference="protein motif:HMMPfam:PF00033" /note="HMMPfam hit to PF00033, Cytochrome b/b6,N-terminal, score 1.6e-25" gene complement(741597..742706) /gene="qcrA" /locus_tag="CMS_0696" /old_locus_tag="CMS0696" /db_xref="GeneID:6158916" CDS complement(741597..742706) /gene="qcrA" /locus_tag="CMS_0696" /old_locus_tag="CMS0696" /codon_start=1 /transl_table=11 /product="ubiquinol-cytochrome C reductase iron-sulfur subunit (Rieske iron-sulfur protein)" /protein_id="YP_001709460.1" /db_xref="GI:170781128" /db_xref="GeneID:6158916" /translation="MAHDDEDESGVVPAGYDAGELEPAGRDVVLPGGTAVATRDAFQN PGFPEHRLRVTDKDPKKAKTAERVVYTCFYLSIVGSVFAIGAYFGFPIYADDPGSVRL NNLFLGVGIALALLSLGIGAIHWSKALMSDHELIDERHPQGGSPATQARAVEIFAQAN EESGFGRRSLIRNSLIGALVAFPLPAVILFRDLYPGSAEEPASALSHTLWKKGEVLTR DPSGTPIKASDVTIGSAFHVIPASLMELEEDKLEEKAKAAVLLMRLRPEDLVESPERK GWSYDGIVAYSKVCTHVGCPVALYEQQTHHLLCPCHQSQFDVTNHCEVIFGPAKRPLP QLPIAVNDEGYLIAQSDFTEPVGASFWERRGDYNS" misc_feature complement(741678..741974) /gene="qcrA" /locus_tag="CMS_0696" /old_locus_tag="CMS0696" /inference="protein motif:HMMPfam:PF00355" /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] region,score 6.2e-09" misc_feature complement(741765..741782) /gene="qcrA" /locus_tag="CMS_0696" /old_locus_tag="CMS0696" /note="PS00200 Rieske iron-sulfur protein signature 2." misc_feature complement(order(742140..742199,742329..742397, 742425..742493)) /gene="qcrA" /locus_tag="CMS_0696" /old_locus_tag="CMS0696" /note="3 probable transmembrane helices predicted for CMS0696 by TMHMM2.0 at aa 72-94, 104-126 and 170-189" gene complement(742752..743552) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /db_xref="GeneID:6158915" CDS complement(742752..743552) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /codon_start=1 /transl_table=11 /product="ubiquinol-cytochrome c reductase cytochrome c subunit" /protein_id="YP_001709461.1" /db_xref="GI:170781129" /db_xref="GeneID:6158915" /translation="MSTKTARARRTGRRSPLTTIALLAIGLLTTGGAYAMIQSGSASA EVDLKSAQTIDEGQKLFGSNCATCHGMDATGTGVAPSLIGVGAASVDFQVGTGRMPLQ GTTVQAPEKPTQFTDTQVKELAAYVASLAPGPAIPDGQYLDGKGDAANGAELFRINCA MCHNVAAAGGALTEGKFAPSLEGVAPVHIYEAMVTGPQNMPVFNDTNISPEDKRDIIT SLQYIEENSTVGGANLGGLGPVSEGLFMWIFGLGGIVALTVWLTARSN" sig_peptide complement(742752..742883) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /note="Signal peptide predicted for CMS0697 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.373 between residues 44 and 45" misc_feature complement(order(742764..742823,743427..743495)) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /note="2 probable transmembrane helices predicted for CMS0697 by TMHMM2.0 at aa 20-42 and 244-263" misc_feature complement(742881..743108) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /inference="protein motif:HMMPfam:PF00034" /note="HMMPfam hit to PF00034, Cytochrome c, class I,score 0.0041" misc_feature complement(743061..743078) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /note="PS00190 Cytochrome c family heme-binding site signature." misc_feature complement(743160..743390) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /inference="protein motif:HMMPfam:PF00034" /note="HMMPfam hit to PF00034, Cytochrome c, class I,score 7.7e-08" misc_feature complement(743322..743354) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /note="PS00639 Eukaryotic thiol (cysteine) proteases histidine active site." misc_feature complement(743343..743360) /gene="qcrC" /locus_tag="CMS_0697" /old_locus_tag="CMS0697" /note="PS00190 Cytochrome c family heme-binding site signature." gene complement(743579..744217) /gene="ctaE" /locus_tag="CMS_0698" /old_locus_tag="CMS0698" /db_xref="GeneID:6158917" CDS complement(743579..744217) /gene="ctaE" /locus_tag="CMS_0698" /old_locus_tag="CMS0698" /EC_number="1.9.3.1" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase polypeptide III" /protein_id="YP_001709462.1" /db_xref="GI:170781130" /db_xref="GeneID:6158917" /translation="MEPVTTTSISPVSIAPVVNRPNTVAVGTIVWLGSEVMFFAGLFA IYFTLRSTSGALWEFEAGRLNVPFSLVNTLILVSSSFTCQFGVFAAERLQARATGWKP SQWGTVEWFFLTYALGAIFVVGQIFEYATLVTEGITLSSNAYGSAFYMTTGFHGLHVT GGLIAFLLVIGRIFAVRSMGHREATSAIVVSYYWHFVDVVWIGLFLVIYVLK" misc_feature complement(743585..744202) /gene="ctaE" /locus_tag="CMS_0698" /old_locus_tag="CMS0698" /inference="protein motif:HMMPfam:PF00510" /note="HMMPfam hit to PF00510, Cytochrome c oxidase,subunit III, score 9e-09" misc_feature complement(order(743585..743653,743690..743758, 743822..743890,743948..744016,744074..744142)) /gene="ctaE" /locus_tag="CMS_0698" /old_locus_tag="CMS0698" /note="5 probable transmembrane helices predicted for CMS0698 by TMHMM2.0 at aa 26-48, 68-90, 110-132, 154-176 and 189-211" gene 744297..745352 /gene="trpD" /locus_tag="CMS_0699" /old_locus_tag="CMS0699" /db_xref="GeneID:6158645" CDS 744297..745352 /gene="trpD" /locus_tag="CMS_0699" /old_locus_tag="CMS0699" /EC_number="2.4.2.18" /note="Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="YP_001709463.1" /db_xref="GI:170781131" /db_xref="GeneID:6158645" /translation="MPSAPTWPALITTLIEGRHLSVSESTWAMRQVMRGEATPAQLGG LLVALRASGETVDEIVGFRDAVLEDALPLDADPRALDIVGTGGDPYGAVLNISSAASI VAASTGVPVIKHGNRGASSASGASDVLTALGIDLTIAPERVAAVLRETGITYAHAALF HPGFRHAAATRRELGISTLFNVLGPLCNPARPEASAVGVADLSRVPLMVGVFRTRGAT ALVYRGDDGIDKLTTTGHSHIWEVSRGAVTEHDLDPLELGIPRAPIEALLGEGVEENA EVIRRVLAGEPGPQRDVVLLNAAAGLEAFDLMGDPTRVQQPMARRLREKVTVAAEAVD SGRAAAKLEEWAAATRA" misc_feature 744315..744509 /gene="trpD" /locus_tag="CMS_0699" /old_locus_tag="CMS0699" /inference="protein motif:HMMPfam:PF02885" /note="HMMPfam hit to PF02885, Glycosyl transferase,family 3, score 1.4e-21" misc_feature 744522..745313 /gene="trpD" /locus_tag="CMS_0699" /old_locus_tag="CMS0699" /inference="protein motif:HMMPfam:PF00591" /note="HMMPfam hit to PF00591, Glycosyl transferase,family 3, score 1.6e-83" gene 745400..746146 /locus_tag="CMS_0700" /old_locus_tag="CMS0700" /db_xref="GeneID:6159074" CDS 745400..746146 /locus_tag="CMS_0700" /old_locus_tag="CMS0700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709464.1" /db_xref="GI:170781132" /db_xref="GeneID:6159074" /translation="MCGRFVVARATGDLVGDWAVDDVEGDDPAPSWNVAPTTTVRMVA DRRPRDDADGAVRRVLTGARWGIVPPWAKAVQGAPLINARVETVMEKPTFRRAVLTRR AVVPADGYYEWQATASGKQPVYLHGEDERPLAFAAVYEHWRDPAVPEGEPGAWLRSLA IITSAASDALGHIHDRTPVIVPRDRLDEWLDAGTAAVDDVRHLLGSLPEPRLVPRLVS TRVNSVRNDGPDLVAPVDREPAGHGQPTLI" misc_feature 745400..746089 /locus_tag="CMS_0700" /old_locus_tag="CMS0700" /inference="protein motif:HMMPfam:PF02586" /note="HMMPfam hit to PF02586, Protein of unknown function DUF159, score 7.4e-74" gene complement(746234..747752) /locus_tag="CMS_0701" /old_locus_tag="CMS0701" /pseudo /db_xref="GeneID:6156646" misc_feature complement(746300..746983) /locus_tag="CMS_0701" /old_locus_tag="CMS0701" /inference="protein motif:HMMPfam:PF02782" /note="HMMPfam hit to PF02782, Carbohydrate kinase, FGGY,score 1.8e-72" /pseudo misc_feature complement(746597..746659) /locus_tag="CMS_0701" /old_locus_tag="CMS0701" /note="PS00445 FGGY family of carbohydrate kinases signature 2." /pseudo misc_feature complement(746990..747520) /locus_tag="CMS_0701" /old_locus_tag="CMS0701" /inference="protein motif:HMMPfam:PF00370" /note="HMMPfam hit to PF00370, Carbohydrate kinase, FGGY,score 6.2e-44" /pseudo misc_feature complement(747311..747349) /locus_tag="CMS_0701" /old_locus_tag="CMS0701" /note="PS00933 FGGY family of carbohydrate kinases signature 1." /pseudo gene complement(747782..748588) /locus_tag="CMS_0702" /old_locus_tag="CMS0702" /db_xref="GeneID:6156647" CDS complement(747782..748588) /locus_tag="CMS_0702" /old_locus_tag="CMS0702" /codon_start=1 /transl_table=11 /product="putative glycerol uptake facilitator protein" /protein_id="YP_001709465.1" /db_xref="GI:170781133" /db_xref="GeneID:6156647" /translation="MMRQRPPPRLDERSEHHAVDLGVIFLSETVGTALLVLLGCGVVA NVALIKSKGLAGGTLMVNFGWGLAVFAGVTVSYASGAHLNPAVTLGLLAAGKIEDVAS VPVYILAQMVGAIIGAVFCWLAYKQHFDEEPDAATKLGVFSTGPSIRNYAWNLVTEII GTFVLVIVILGFSLANNPDADAATPAGLSALGAIPVALLVVGIGASLGGPTGYAINPA RDLGPRIAHAILPIKGKGSSDWSYAWVPVVGPAIGGVLAGLASYALLPIL" misc_feature complement(order(747797..747865,747962..748030, 748073..748141,748214..748282,748340..748408, 748442..748501)) /locus_tag="CMS_0702" /old_locus_tag="CMS0702" /note="6 probable transmembrane helices predicted for CMS0702 by TMHMM2.0 at aa 30-49, 61-83, 103-125, 150-172,187-209 and 242-264" misc_feature complement(747803..748546) /locus_tag="CMS_0702" /old_locus_tag="CMS0702" /inference="protein motif:HMMPfam:PF00230" /note="HMMPfam hit to PF00230, Major intrinsic protein,score 1.8e-40" misc_feature complement(748319..748345) /locus_tag="CMS_0702" /old_locus_tag="CMS0702" /note="PS00221 MIP family signature." gene 748816..749817 /locus_tag="CMS_0703" /old_locus_tag="CMS0703" /db_xref="GeneID:6156648" CDS 748816..749817 /locus_tag="CMS_0703" /old_locus_tag="CMS0703" /note="with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase subunit DhaK" /protein_id="YP_001709466.1" /db_xref="GI:170781134" /db_xref="GeneID:6156648" /translation="MKKLINDPRAVADEAVRGFASAHPDLVALSADPLFVRRAEPTRP GRVAVVSGGGSGHEPLHAGFVGHGMLDAAVPGPVFTSPTPDPVVAATLAVDGEAGVLH IVKNYTGDVLNFETAAELAEAEGVRVRTVVVDDDVAVTDSLYTAGRRGVAGTVLVERI AGAAAERGDDLDAVAAIAGRVVGQVRSMGVAIRACTVPHAGEPSFALEVDEMEIGIGI HGEPGRVKLPLEPVDAIVERLLDPVLEDLAAPSGSRVLLLVNGMGATPLSELYIAYRR AAAVLEEAGLTVARSLVGDYVTALDMEGLSLTVLLLDDELVDLWDSPVQTAALRWGR" misc_feature 748861..749814 /locus_tag="CMS_0703" /old_locus_tag="CMS0703" /inference="protein motif:HMMPfam:PF02733" /note="HMMPfam hit to PF02733, Dak kinase, score 1.6e-138" gene 749821..750474 /gene="dak2" /locus_tag="CMS_0704" /old_locus_tag="CMS0704" /db_xref="GeneID:6156649" CDS 749821..750474 /gene="dak2" /locus_tag="CMS_0704" /old_locus_tag="CMS0704" /codon_start=1 /transl_table=11 /product="putative dihydroxyacetone kinase subunit" /protein_id="YP_001709467.1" /db_xref="GI:170781135" /db_xref="GeneID:6156649" /translation="MALGTDWVVAWITEAARVIADQRGALIALDREIGDGDHGENLDR GFGAVTAKLAGLASDAAPADALKAVATTLISTVGGASGPLLGTAYLKAAAAVSGRADL DASAITDLLEAAVGGIVLRGKAERGDKTMVDAWAPAAEAARAAADAGSAPADALAAAA DAAARGAEETEPLVARKGRASYLGDRAIGHRDPGAQSSALILRAAATTAADADGGAS" misc_feature 749914..750441 /gene="dak2" /locus_tag="CMS_0704" /old_locus_tag="CMS0704" /inference="protein motif:HMMPfam:PF02734" /note="HMMPfam hit to PF02734, Dak phosphatase, score 2.1e-63" gene 750471..751205 /locus_tag="CMS_0705" /old_locus_tag="CMS0705" /db_xref="GeneID:6158653" CDS 750471..751205 /locus_tag="CMS_0705" /old_locus_tag="CMS0705" /codon_start=1 /transl_table=11 /product="putative PTS system enzyme" /protein_id="YP_001709468.1" /db_xref="GI:170781136" /db_xref="GeneID:6158653" /translation="MSVGLVLVSHSALIAHGLVDLARQMAPTVALIPAGGSGDGTRED AGIGTSFDVVSAALAEAEGGDGVVVLADLGSAYLTAETAVDLLDEDTAARVVVVRALL VEGAVAAAVAAETGGSLEDVAAAAASAAGVDAAEDADAGLAPDPNADGTEPAPAGGAG IVRGEATLVNRDGLHARPAADFVTRASAYSAAVTVNGQNAASLLGVMALGLTRGARVV IEATGDDAEEAVTALVELIESGFGEV" misc_feature 750477..750839 /locus_tag="CMS_0705" /old_locus_tag="CMS0705" /inference="protein motif:HMMPfam:PF03610" /note="HMMPfam hit to PF03610, PTS system fructose subfamily IIA component, score 9.3e-23" misc_feature 750951..751190 /locus_tag="CMS_0705" /old_locus_tag="CMS0705" /inference="protein motif:HMMPfam:PF00381" /note="HMMPfam hit to PF00381, Phosphocarrier HPr protein,score 3.6e-24" misc_feature 750987..751010 /locus_tag="CMS_0705" /old_locus_tag="CMS0705" /note="PS00369 PTS HPR component histidine phosphorylation site signature." gene complement(751231..751647) /locus_tag="CMS_0706" /old_locus_tag="CMS0706" /db_xref="GeneID:6156650" CDS complement(751231..751647) /locus_tag="CMS_0706" /old_locus_tag="CMS0706" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709469.1" /db_xref="GI:170781137" /db_xref="GeneID:6156650" /translation="MTRLSPDAPWSTPDDDAWCPCTSGDPYGACCGPLHRGDAPAPTA ERLMRSRFSAYARGDAAYLARSWHPSTRPEEIEVEPSMRWFRLTIHRTALGGPDDATG VVGFEAAFRHGGERGSQREASRFARHSGAWVYLDAH" gene 751740..752255 /locus_tag="CMS_0707" /old_locus_tag="CMS0707" /db_xref="GeneID:6156651" CDS 751740..752255 /locus_tag="CMS_0707" /old_locus_tag="CMS0707" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709470.1" /db_xref="GI:170781138" /db_xref="GeneID:6156651" /translation="MTPATDLLVDAYGRIVEIVRDAVDGLDVDDLAFRPDAEANSIGW LVWHLARVQDAQVADVAGQEQTWSTGGWAERFALPFDGSATGYGQSSDDVAALEGVTP ELLVGYLEAVQSATLAYLAGLDDAELDRVVDQDWTPPVTLGARLVSVLADDLQHAGQA SYLAGLVARRR" gene complement(752301..752792) /locus_tag="CMS_0708" /old_locus_tag="CMS0708" /db_xref="GeneID:6156652" CDS complement(752301..752792) /locus_tag="CMS_0708" /old_locus_tag="CMS0708" /codon_start=1 /transl_table=11 /product="putative glutathione peroxidase" /protein_id="YP_001709471.1" /db_xref="GI:170781139" /db_xref="GeneID:6156652" /translation="MTHPRLDEIPLTTLQGEATTFGAYADKVVLVVNVASRCGLAPQY EKLEQLQRTYGERGFTVIGFPSNQFLQELGSAEAIDEYCSTTWGVTFPMMEKVKVNGR SAHPVYAELTKTPDAEGKAGRVKWNFEKFVVTPSGAVHRFRPTVEPDAPEIVSLIEAE LPA" misc_feature complement(752457..752708) /locus_tag="CMS_0708" /old_locus_tag="CMS0708" /inference="protein motif:HMMPfam:PF00255" /note="HMMPfam hit to PF00255, Glutathione peroxidase,score 1.4e-23" misc_feature complement(752586..752609) /locus_tag="CMS_0708" /old_locus_tag="CMS0708" /note="PS00763 Glutathione peroxidases signature 2." gene complement(752860..754620) /locus_tag="CMS_0709" /old_locus_tag="CMS0709" /db_xref="GeneID:6156653" CDS complement(752860..754620) /locus_tag="CMS_0709" /old_locus_tag="CMS0709" /codon_start=1 /transl_table=11 /product="putative glycerol phosphate dehydrogenase" /protein_id="YP_001709472.1" /db_xref="GI:170781140" /db_xref="GeneID:6156653" /translation="MTTSKKTELRDNVARIHDRPSAKVLVIGGGINGIATFRDLALQG VDVVLVERADYGSGASAASSHMIHGGIRYLENGEFRLVRESVEERNGLIRIAPHYVKP LQTTMPIFSTFSGILNAPLRMLTHKQRSTKERGALLISVGMTLYDSFSRDGGSVPRHR FRIGKAAREDMPALNKDVKFTGTYYDASVHEPERLALDVLKDGLAAGDHARSANYLEA VGVADGGVKLRDVISGTEFVVTADVVVNASGPWTDLTNEAMGGDTKYMGGTKGSHIVV DNAELLEATKGREIFFENNDGRIVLIYPLKGRVLIGTTDIDADPREPAVCTEEEVDYF FDLVKHVFPQIELNRDHIVYRYSGIRPLPRHEDTAPGFVSRDYRIVETEIQGLSGSKV LSLVGGKWTTFRALSAHLSTEATTRLGVERSVDTTGMPIGGGKDFPSSSTARARWIAT QAARAEGIGTEQVDRLLNRYGTRATSVIDVLSGQPSTPLATDPQLTRAEIAYFATHED AVHLADVVLRRTNLAFVGGVTHEMLAEIADVLQEVLGWTGEERDAEIQDTVDTLLTYH GVDVGATKVAADATVMEFAN" misc_feature complement(753409..754554) /locus_tag="CMS_0709" /old_locus_tag="CMS0709" /inference="protein motif:HMMPfam:PF01266" /note="HMMPfam hit to PF01266, FAD dependent oxidoreductase, score 5.3e-37" gene 754712..755689 /locus_tag="CMS_0710" /old_locus_tag="CMS0710" /db_xref="GeneID:6156654" CDS 754712..755689 /locus_tag="CMS_0710" /old_locus_tag="CMS0710" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001709473.1" /db_xref="GI:170781141" /db_xref="GeneID:6156654" /translation="MCKARVMVDGIAHERTQDALRAAHLYYMQDLTMEAIARELGTSR SSVSRLLSFARETGLVDIQIRSPLDLATVLGEQLHDRYGVVAHVVPVPDQTSDVDRVD RVALSAARMLTQYVDSNMVVGVAWGSTVSTVSRYLVPKPTHNTLVVQLNGAGNVRTTG IMYASEILRRFGQAYGATVQQFPVPAFFDDPATKQALWRERSTKRVLELQERMDMVLF GVGSPVALVPSHVYSGGYLERSDQRALDADGVVGDVSTVFFREDGSSADIAINARASG PDLATIRRAPRRVCVVAGASKVRSVRGALAAGLVTDVVLDEGTARALLA" misc_feature 754802..754867 /locus_tag="CMS_0710" /old_locus_tag="CMS0710" /note="Predicted helix-turn-helix motif with score 2140.000, SD 6.48 at aa 31-52, sequence LTMEAIARELGTSRSSVSRLLS" misc_feature 754907..755686 /locus_tag="CMS_0710" /old_locus_tag="CMS0710" /inference="protein motif:HMMPfam:PF04198" /note="HMMPfam hit to PF04198, Putative sugar-binding region, score 3.1e-69" gene complement(755741..755813) /locus_tag="CMS_r019" /old_locus_tag="CMSr019" /db_xref="GeneID:6156655" tRNA complement(755741..755813) /locus_tag="CMS_r019" /old_locus_tag="CMSr019" /product="tRNA-Val" /note="codon recognized: GUG; tRNA Val anticodon CAC, Cove score 76.00" /anticodon=(pos:755778..755780,aa:Val) /db_xref="GeneID:6156655" gene 756094..756165 /locus_tag="CMS_r020" /old_locus_tag="CMSr020" /db_xref="GeneID:6159070" tRNA 756094..756165 /locus_tag="CMS_r020" /old_locus_tag="CMSr020" /product="tRNA-Gly" /note="codon recognized: GGC; tRNA Gly anticodon GCC, Cove score 73.90" /anticodon=(pos:756126..756128,aa:Gly) /db_xref="GeneID:6159070" gene 756230..756300 /locus_tag="CMS_r017" /old_locus_tag="CMSr017" /db_xref="GeneID:6159040" tRNA 756230..756300 /locus_tag="CMS_r017" /old_locus_tag="CMSr017" /product="tRNA-Cys" /note="codon recognized: UGC; tRNA Cys anticodon GCA, Cove score 52.40" /anticodon=(pos:756262..756264,aa:Cys) /db_xref="GeneID:6159040" gene 756314..756385 /locus_tag="CMS_r018" /old_locus_tag="CMSr018" /db_xref="GeneID:6159035" tRNA 756314..756385 /locus_tag="CMS_r018" /old_locus_tag="CMSr018" /product="tRNA-Val" /note="codon recognized: GUC; tRNA Val anticodon GAC, Cove score 76.23" /anticodon=(pos:756346..756348,aa:Val) /db_xref="GeneID:6159035" gene 756547..758601 /gene="thrS" /locus_tag="CMS_0711" /old_locus_tag="CMS0711" /db_xref="GeneID:6159068" CDS 756547..758601 /gene="thrS" /locus_tag="CMS_0711" /old_locus_tag="CMS0711" /note="catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)" /codon_start=1 /transl_table=11 /product="threonyl-tRNA synthetase" /protein_id="YP_001709474.1" /db_xref="GI:170781142" /db_xref="GeneID:6159068" /translation="MVDAAQPEIHDEAAPAETTGQPVEATEAGTGFTLFSDRAVVAMR IDGELKDLAAEVAPGDVVEPVRIDSPDGLAILRHSAAHVMAQAVQQINPEAKLGIGPP VTDGFYFDFDVAEPFTPEDLKAISKNMERIVRQGQRFTRRVVSEEEARELMAAEPYKL ELIGLKGGSSDELGEDGESVEVGGAELTVYENVDGKTGEVFWRDLCRGPHLPSTRMVG NGWALSRVAAAYWRGSEKNPQLQRIYGTAWPTKDELRAYQGRIEEALKRDHRRLGAEL DLFSFPDEIGSGLAVFHPKGGIIRREMEDYSRRRHETAGYEFVYSPHITKSNLFETSG HLDFYKDGMFPAMHLDEARNDEGEITRQGADYYLKPMNCPMHVLIYRSRQRSYRELPL RLFEFGTVYRNEKSGVIHGLTRVRGMTQDDAHIFTTRERMADELKGTLEFVLSLLRDY GLDDFYLELSTKDPEKFVGSDEVWEEATETLRQVAVDTGLELVPDPAGAAFYGPKISV QARDAIGRTWQMSTIQLDFNLPERFGLEYTANDGTRKQPVMIHRALFGSIERFFGVLT EHYAGAFPVWLSPVQVVGIPVAEDYEEYLGGVLDRLRAEGVRVQLDTSDDRMPKKIRT HTKARVPYQLIAGEDDRAAGSVSFRFRDGTQVNGVPVAEAVERITGAIARREQVVTAW PV" misc_feature 757408..757908 /gene="thrS" /locus_tag="CMS_0711" /old_locus_tag="CMS0711" /inference="protein motif:HMMPfam:PF00587" /note="HMMPfam hit to PF00587, tRNA synthetases, class-II (G, H, P and S), score 2e-46" misc_feature 758209..758238 /gene="thrS" /locus_tag="CMS_0711" /old_locus_tag="CMS0711" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." misc_feature 758287..758559 /gene="thrS" /locus_tag="CMS_0711" /old_locus_tag="CMS0711" /inference="protein motif:HMMPfam:PF03129" /note="HMMPfam hit to PF03129, Anticodon-binding, score 1.1e-20" gene 758604..759188 /locus_tag="CMS_0712" /old_locus_tag="CMS0712" /db_xref="GeneID:6156656" CDS 758604..759188 /locus_tag="CMS_0712" /old_locus_tag="CMS0712" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709475.1" /db_xref="GI:170781143" /db_xref="GeneID:6156656" /translation="MSDHESGGEDERGQVRVDDPGHLAGVPDEFQRLWPPHRMVYIQK GQQPDRDECPFCIAPSMSDEDALIVARGEHAYVLLNLFPYNSGHLLVCPYRHIATYDL ASPEEVAEIGSLTQTAMRVVREVSRNDGYNIGMNQGQVAGAGIAEHLHQHIVPRWGQD ANFLPIIAKTKALPQLLGDVRASIAAAWPAPAGE" misc_feature 758760..759080 /locus_tag="CMS_0712" /old_locus_tag="CMS0712" /inference="protein motif:HMMPfam:PF01230" /note="HMMPfam hit to PF01230, Histidine triad (HIT) protein, score 2.2e-10" misc_feature 758823..758855 /locus_tag="CMS_0712" /old_locus_tag="CMS0712" /note="PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature." gene 759202..760104 /locus_tag="CMS_0713" /old_locus_tag="CMS0713" /db_xref="GeneID:6156657" CDS 759202..760104 /locus_tag="CMS_0713" /old_locus_tag="CMS0713" /note="with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate" /codon_start=1 /transl_table=11 /product="pyridoxal biosynthesis lyase PdxS" /protein_id="YP_001709476.1" /db_xref="GI:170781144" /db_xref="GeneID:6156657" /translation="MTDTNTTGQVGSNRVKRGLAEMLKGGVIMDVVNAEQARIAEDAG AVAVMALERVPADIRSQGGVARMSDPDLIDQIKAEVSIPVMAKARIGHFVEAQVLQSL EVDYIDESEVLSPADYVNHIDKWGFTVPFVCGATTLGEALRRITEGAAMIRSKGEAGT GDVSEATKHIRTIKSEIRALSALTHDEIYVAAKELQAPYDLVLEVARTGQLPVVLFTA GGVATPADAAMMMQLGADGVFVGSGIFKSGNPVARAKAVVTATALFNDPDAIAEASRG LGEAMVGINVADVPAPHRLAERGW" misc_feature 759238..759855 /locus_tag="CMS_0713" /old_locus_tag="CMS0713" /inference="protein motif:HMMPfam:PF01680" /note="HMMPfam hit to PF01680, Vitamin B6 biosynthesis protein, score 5.8e-125" misc_feature 759832..759888 /locus_tag="CMS_0713" /old_locus_tag="CMS0713" /note="PS01235 Uncharacterized protein family UPF0019 signature." gene 760094..760723 /locus_tag="CMS_0714" /old_locus_tag="CMS0714" /db_xref="GeneID:6156658" CDS 760094..760723 /locus_tag="CMS_0714" /old_locus_tag="CMS0714" /note="with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase subunit PdxT" /protein_id="YP_001709477.1" /db_xref="GI:170781145" /db_xref="GeneID:6156658" /translation="MAGSTPAPHGDGPLVGVLALQGDVREHVRVLEGFGARTRLVRQP KDLPGISGLVIPGGESTVMDKLSRQFGIAEPLRAAIDDGLPVYGTCAGLIMLADEIVD AIHDQRGIGGLDVSVRRNAFGSQTASFEVDLDVPALGAPPVHAVFIRAPVVASVGPAA SALASLDDGRVVAVRQGALLGTSFHPEVTGDLRFHRLFLDMVEDAGRTL" misc_feature 760142..760705 /locus_tag="CMS_0714" /old_locus_tag="CMS0714" /inference="protein motif:HMMPfam:PF01174" /note="HMMPfam hit to PF01174, SNO glutamine amidotransferase, score 4.4e-71" misc_feature 760220..760672 /locus_tag="CMS_0714" /old_locus_tag="CMS0714" /inference="protein motif:HMMPfam:PF07685" /note="HMMPfam hit to PF07685, CobB/CobQ-like glutamine amidotransferase domain" gene 760800..761567 /locus_tag="CMS_0715" /old_locus_tag="CMS0715" /db_xref="GeneID:6156659" CDS 760800..761567 /locus_tag="CMS_0715" /old_locus_tag="CMS0715" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709478.1" /db_xref="GI:170781146" /db_xref="GeneID:6156659" /translation="MSGHSKWATTKHKKAIIDSRRAKSFAKLIKNIEVAAKIGGADMS GNPTLVDAVQKAKKTSVPNDNIDRAVKRGAGLLGEVVDYQTIMYEGYAANGVAMLVEC LTDNKNRAAAEVRTAMSRNGGTMADPGSVAYNFHRKGVIAVPHADAPTEDDVLAAVLD AGAEDVTDHGEVFEIRCEPSDMVGVRQALQEAGIDYDSADVEFVPQVKVEVDLETARK VNKLVDAMEDLDDVQNIYVNSDVPADVQAALDDDDEE" misc_feature 760812..761519 /locus_tag="CMS_0715" /old_locus_tag="CMS0715" /inference="protein motif:HMMPfam:PF01709" /note="HMMPfam hit to PF01709, Protein of unknown function DUF28, score 1.3e-120" gene 761619..762233 /gene="ruvC" /locus_tag="CMS_0716" /old_locus_tag="CMS0716" /db_xref="GeneID:6156660" CDS 761619..762233 /gene="ruvC" /locus_tag="CMS_0716" /old_locus_tag="CMS0716" /EC_number="3.1.22.4" /note="endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /protein_id="YP_001709479.1" /db_xref="GI:170781147" /db_xref="GeneID:6156660" /translation="MRILGIDPGLTRCGVGVVDVYADRSARLVDVQVVRTSPTAELHH RLLAVGDGIEELVDRHRPSVVAVERVFAQDNLSTVMGVAQITGVALVGAARRGLDVAL HTPSEVKAAVTGYGQADKRQVATMVARILGLDELPTPADASDALALAICAGWRAGMSR AGIAGTQAPTRTGVASAADAAAGAGPTAAQAAWLAAERAQRGRR" misc_feature 761625..762074 /gene="ruvC" /locus_tag="CMS_0716" /old_locus_tag="CMS0716" /inference="protein motif:HMMPfam:PF02075" /note="HMMPfam hit to PF02075, Crossover junction endodeoxyribonuclease RuvC, score 8.2e-66" misc_feature 761958..762065 /gene="ruvC" /locus_tag="CMS_0716" /old_locus_tag="CMS0716" /note="PS01321 Crossover junction endodeoxyribonuclease ruvC signature." gene 762251..762895 /gene="ruvA" /locus_tag="CMS_0717" /old_locus_tag="CMS0717" /db_xref="GeneID:6158975" CDS 762251..762895 /gene="ruvA" /locus_tag="CMS_0717" /old_locus_tag="CMS0717" /note="plays an essential role in ATP-dependent branch migration of the Holliday junction" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvA" /protein_id="YP_001709480.1" /db_xref="GI:170781148" /db_xref="GeneID:6158975" /translation="MISSLRGTVLSVSGQTLLLEVHGVGYGVSVTPRHALELRHGSEA TVLTSLVVREDSLTLFGFPGPDELRAFELLCGVTGVGPKSALAVLEHLDPEAMAQAVA AEDDAAFRRVSGIGPKTAKLIVLQLAGKLFVTQPRTRSASSAASTVTADVVTALIGLG WSERVARTAVDDAAAAAAEQGLPADMPRLLRVALGMLGPQQPAGAPAAAQAADR" misc_feature 762251..762433 /gene="ruvA" /locus_tag="CMS_0717" /old_locus_tag="CMS0717" /inference="protein motif:HMMPfam:PF01330" /note="HMMPfam hit to PF01330, Bacterial DNA recombination protein, RuvA, score 2.2e-22" misc_feature 762434..762523 /gene="ruvA" /locus_tag="CMS_0717" /old_locus_tag="CMS0717" /inference="protein motif:HMMPfam:PF00633" /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 0.11" misc_feature 762539..762628 /gene="ruvA" /locus_tag="CMS_0717" /old_locus_tag="CMS0717" /inference="protein motif:HMMPfam:PF00633" /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 2.7" gene 762892..763971 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /db_xref="GeneID:6158973" CDS 762892..763971 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /note="promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvB" /protein_id="YP_001709481.1" /db_xref="GI:170781149" /db_xref="GeneID:6158973" /translation="MSGLAHGDASSPVPESDAELAFEGALRPRSLSEFVGQVKVRGQL ELLLTAAAMQNRSPDHILLAGPPGLGKTTLAMIVAEESRRPLRLTSGPAIQHAGDLAA VLSALVPGEILFVDEIHRMARSAEEMLYLAMEDYRIDIMVGKGAGATSIPLELSPFTL VGATTRSGMLPSPLRDRFGFTAHLEFYETHELEQVIERAARMLHLEIEHEAVAEIAGR CRGTPRIANRLLRRVRDYALVHGTEAGLESVRAALDLYDVDPLGLDRLDRAVMRGILT RFGGGPVGLNTLAVSVGEEAETIESVVEPFLVRIGLVTRTPRGRVATPAAWEHFGLEA PAAPGAPGRAPGPSGAAGALHSDEL" misc_feature 762910..763068 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /inference="protein motif:HMMPfam:PF05496" /note="HMMPfam hit to PF05496, Holliday junction DNA helicase RuvB, N-terminal, score 4.1e-08" misc_feature 763069..763608 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 3.2e-26" misc_feature 763084..763107 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 763654..763890 /gene="ruvB" /locus_tag="CMS_0718" /old_locus_tag="CMS0718" /inference="protein motif:HMMPfam:PF05491" /note="HMMPfam hit to PF05491, Holliday junction DNA helicase RuvB, C-terminal, score 2.9e-45" gene 764009..764431 /locus_tag="CMS_0719" /old_locus_tag="CMS0719" /db_xref="GeneID:6158974" CDS 764009..764431 /locus_tag="CMS_0719" /old_locus_tag="CMS0719" /codon_start=1 /transl_table=11 /product="putative preprotein translocase subunit" /protein_id="YP_001709482.1" /db_xref="GI:170781150" /db_xref="GeneID:6158974" /translation="MSVTSQHLKGPSRMDPFTLIMFAVLALLIFFMFRNSRKRQKDLA ALQTQMVPGAEVMTASGIYGTLVSFDEENNLAYLEVSPGTVLKLHRQTIARVVEPTVA DDASVLVDDAPAAGVVDEAGTSDASRRLDEGDAPTARS" misc_feature 764051..764299 /locus_tag="CMS_0719" /old_locus_tag="CMS0719" /inference="protein motif:HMMPfam:PF02699" /note="HMMPfam hit to PF02699, YajC, score 3.9e-07" misc_feature 764051..764107 /locus_tag="CMS_0719" /old_locus_tag="CMS0719" /note="1 probable transmembrane helix predicted for CMS0719 by TMHMM2.0 at aa 15-33" gene 764558..766369 /gene="secD" /locus_tag="CMS_0720" /old_locus_tag="CMS0720" /db_xref="GeneID:6156661" CDS 764558..766369 /gene="secD" /locus_tag="CMS_0720" /old_locus_tag="CMS0720" /note="part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecD" /protein_id="YP_001709483.1" /db_xref="GI:170781151" /db_xref="GeneID:6156661" /translation="MAKSPTPVRKARRKLIWLLVIIGILAGGNAASVAFSNGSWTPKL ALDLEGGTQIILAPQLDGASSGPTSEQLAQAVSIIRQRVDASGVSEAEITTQGGSNIV VSLPGEPDAATMQRLQSSAKLELRPVLIGAAGTASVAPTPTPTDGSAPADGTTPTDGS TPAAEAPAATPDPSTLSDEPTAEPTGPSDVSWVTPRLQAEFAAYDCATAPESDGQAAP ADRAIIACSDDGAAKYVLGPVEVDGSTISDATSGLQQSSQGVSTGTWSVNLVFDGDGT KQFGDMSTRLITLESPRNQFAFVLDNEVISAPVTQGVVTNGKPSITGNFTQESAKALA DQLKFGALPLSFTLQSSDVISATLGSSQLTSGLIAGLIGLVLVVLYSLVQYRALGMVT IASLVIAAVITYLLITLLSWREGYRLSLAGVAGLIVAIGITADSFIVYFERIKDELRD GRGLVSSVEQGWKRALRTIIASDTVNFLAAAVLFILAVGNVKGFALTLGLTTIIDLIV VSLFTHPILQLLANRRFFAEGHRMSGLDPRALGAVYRGRATFRTPTATTGRRAAAAKE AARRQTIAERKAAQQATGSTKTATIDAPRADDTSRDD" sig_peptide 764558..764665 /gene="secD" /locus_tag="CMS_0720" /old_locus_tag="CMS0720" /note="Signal peptide predicted for CMS0720 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.817 between residues 36 and 37" misc_feature order(764594..764662,765629..765697,765716..765784, 765812..765880,765962..766030,766040..766108) /gene="secD" /locus_tag="CMS_0720" /old_locus_tag="CMS0720" /note="6 probable transmembrane helices predicted for CMS0720 by TMHMM2.0 at aa 13-35, 358-380, 387-409,419-441, 469-491 and 495-517" gene 766369..767379 /gene="secF" /locus_tag="CMS_0721" /old_locus_tag="CMS0721" /db_xref="GeneID:6158982" CDS 766369..767379 /gene="secF" /locus_tag="CMS_0721" /old_locus_tag="CMS0721" /note="forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecF" /protein_id="YP_001709484.1" /db_xref="GI:170781152" /db_xref="GeneID:6158982" /translation="MAGFSEFGNDLYTGKRSFDIVGRRRLWYSIAAICILVSVLGPLL RGGFTFGIEFTGGSEYTVSGVQSQSQDIASDAVATVTPVPARVSSVGSDGVRVQTDQL QPADSTAVRQALATAYGVETSSVTESFIGPSWGQDITRQALWGLVVFLALAAVVMSVY FRTWKMSVAAIIALLHDLVLTAGIYGITGFEVTPAAVIGFLTILGYSLYDTVVVFDKI RENTAEDGQESRRTFAQSVNLAVNQTLVRSINTSIVAILPVGSILFIGAVVLGAGTLR DIALSLFIGIIVGTYSTIFIAAPLYAHLREGEPKVKRGDALAASAASRAQAERAAVTV ES" misc_feature order(766444..766512,766780..766848,766867..766935, 766945..767013,767125..767193,767206..767274) /gene="secF" /locus_tag="CMS_0721" /old_locus_tag="CMS0721" /note="6 probable transmembrane helices predicted for CMS0721 by TMHMM2.0 at aa 26-48, 138-160, 167-189,193-215, 253-275 and 280-302" misc_feature 766693..767289 /gene="secF" /locus_tag="CMS_0721" /old_locus_tag="CMS0721" /inference="protein motif:HMMPfam:PF02355" /note="HMMPfam hit to PF02355, SecD/SecF/SecDF export membrane protein, score 2.4e-67" gene 767376..767735 /locus_tag="CMS_0722" /old_locus_tag="CMS0722" /db_xref="GeneID:6158984" CDS 767376..767735 /locus_tag="CMS_0722" /old_locus_tag="CMS0722" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709485.1" /db_xref="GI:170781153" /db_xref="GeneID:6158984" /translation="MTSSQGAGVPEDLDAATAKARTATGDSWLLDVREPDEWEAGHSA VAHHIPMGELEARVAEIPTDRHIAVVCRSGHRSGIATQALLRGGFAASNVTGGMHAWS EMGGDVVTDDGQPGRVA" gene 767866..770115 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /db_xref="GeneID:6156662" CDS 767866..770115 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /EC_number="2.7.6.5" /codon_start=1 /transl_table=11 /product="GTP pyrophosphokinase" /protein_id="YP_001709486.1" /db_xref="GI:170781154" /db_xref="GeneID:6156662" /translation="MTETTSSTASLRRLVPRLFSRAQPAGAVEQLIRTARLHHPKADM SLIERAYAVAERAHEGQKRKSGEPYITHPVAVAQILADLGIGPKTLAAALLHDTVEDT EYTLDMLRHDFGDEIAMLVDGVTKLDKLKYGDSAQAETVRKMVVAMSKDIRVLVVKLA DRLHNARTWGFVESASAERKAKETLEIYAPLAHRLGISTIKWELEDLSFAVLYPKIYV EIENLVKQRTPQREEFVQQVIDSVNDDLRAAKIRGKVAGRPKQYYSIYQKMVVRGREF DEIYDLVGIRVLVDSLRDCYAVLGAIHARWTPVPGRFKDYIATPKFNLYQSLHTTVIG PKGRPVEIQIRTHEMHQRAEFGVAAHWKYKERMNGGRAAEVSPQGDTDLAWLAHISDW QSETADPGEFLDSLRFEIGAKEVYVFTPHGKVIGLPAGGTPVDFAYAVHTDVGHRTMG AKVNGRLVPLENPLTTGDVVEVFTSKNPDSGPSKDWLAIVKSARARNKIKQWFTKERR EEAIEQGKDAIARAMRKQNLPLQKLMNQDAFSDVAQSMKYDDVAALYAAVGEGHVSTQ SVIEKVLSSIQGDSGGEAEEVFAVTQRSRVSRNSDSGVLVRGAPDILVKLAKCCTPVP GDEIIGFVTRGAGVSVHQANCHNVDSLRAEPDRMIEVEWAPSSKSLFLVHIQVEALDR SGLLSDVTRVLSEHHVNILSASVSTSSNRLAISRFVFEMGDVTHLDRVLNAVRRIDAV YDVYRVSGG" misc_feature 768070..768363 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /inference="protein motif:HMMPfam:PF01966" /note="HMMPfam hit to PF01966, Metal-dependent phosphohydrolase, HD subdomain, score 9.4e-15" misc_feature 768634..768966 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /inference="protein motif:HMMPfam:PF04607" /note="HMMPfam hit to PF04607, RelA/SpoT, score 6.3e-56" misc_feature 769096..769287 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /inference="protein motif:HMMPfam:PF02824" /note="HMMPfam hit to PF02824, TGS, score 4.3e-26" misc_feature 769882..770103 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1e-14" misc_feature 769906..769953 /gene="relA" /locus_tag="CMS_0723" /old_locus_tag="CMS0723" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(770094..770669) /locus_tag="CMS_0724" /old_locus_tag="CMS0724" /db_xref="GeneID:6158928" CDS complement(770094..770669) /locus_tag="CMS_0724" /old_locus_tag="CMS0724" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709487.1" /db_xref="GI:170781155" /db_xref="GeneID:6158928" /translation="MSPRLAPVLSVLDLPLAELCSARLDGEVYEVDACYSPVDELASP WLRAAALAAWVHGAVRTPPRTHEYCVDSVARCHPPALRNVRIREVVLDERDTIVLAGL RITTPLRTLCDIARTVADFSPFHEDACLGLLTLPGVTDAAAREHLAASGALPDKRRAL TRLDALARRTAPRDDAEGGRGADARQPPLTR" gene complement(770763..771995) /locus_tag="CMS_0725" /old_locus_tag="CMS0725" /db_xref="GeneID:6156663" CDS complement(770763..771995) /locus_tag="CMS_0725" /old_locus_tag="CMS0725" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709488.1" /db_xref="GI:170781156" /db_xref="GeneID:6156663" /translation="MADNDQTPWGRVDETGTVFLREGDGERAVGQYPDGTPEEALAYF QRKFTDLARQVTLLEQRAKRGAPATDVAKAVAHLIQAVDGANAVGDLAALRARLDVLA ATVGELTEKQGEEQRQVVQGAIAERTAIVEETERLASQDFSKVQWKQLTAEVDALFAR WQQHQQTGPRLPKNDANELWKRFRTARSTIDTERKAFFAELDNAHKDARSKKQAIVEQ ARALEPQGVAGIPAYRRLLDEWKLAGRAGKRYDDALWAQFKAAGDVLYGAKAEVDAAD DEEQQANLQAKLALLDEAEPILQITERTAARDKLTAVQLRWDAIGRVPRDSVKTVEDR LRKVETHVRTLDEEFWRKNNPETKARSEGLASQLGAAIDKLQRELDAARADGDARRIK DAEEALAARRVWLDALGS" misc_feature complement(771012..771242) /locus_tag="CMS_0725" /old_locus_tag="CMS0725" /inference="protein motif:HMMPfam:PF03993" /note="HMMPfam hit to PF03993, Protein of unknown function DUF349, score 4.7e-11" gene 772596..774056 /locus_tag="CMS_0726" /old_locus_tag="CMS0726" /db_xref="GeneID:6156664" CDS 772596..774056 /locus_tag="CMS_0726" /old_locus_tag="CMS0726" /codon_start=1 /transl_table=11 /product="recombination factor protein RarA" /protein_id="YP_001709489.1" /db_xref="GI:170781157" /db_xref="GeneID:6156664" /translation="MTDTRPGLRSGATPLAVRMRPRSLDEVTGQRHLLTPGSPLVSLA SDVAGEQGSVSIILWGPPGTGKTTLAQAIAHGSSRRFVELSAVTAGVRDVRQVMEKAL SDRDLFGVSTVLFLDEIHRFTKAQQDALLPGVENGWVILIAATTENPSFSVISPLLSR SLLLTLEQLDDDDLGVLVDRAVADARGLGGRFALEDDARAMIIRLASGDARRALTALE AAAVSAQADASGRARAAAEGQEPDEDDDDDGEDDDEDDEREDADAAAAEDPASIPIPI PISTEQVALAVDRALLRYDRNGDEHYDVISAFIKSIRGSDVDAALHYLARMIEAGEDP RFIARRIIVSASEDIGLADPEALVVAVAAADAVQLIGMPEGRIPLAQAVVHLATAPKS NASYLGIDQAIADVRAGAFGRVPLHLRDAHYPGAKRLGHGKGYRYPHDADIGVVTQQY LPDELVGRTYYSPTQHGHERDLSARLEKLRRIVRGG" misc_feature 772758..773276 /locus_tag="CMS_0726" /old_locus_tag="CMS0726" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 5.9e-12" misc_feature 772773..772796 /locus_tag="CMS_0726" /old_locus_tag="CMS0726" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 774305..774934 /gene="rpsD" /locus_tag="CMS_0727" /old_locus_tag="CMS0727" /db_xref="GeneID:6156665" CDS 774305..774934 /gene="rpsD" /locus_tag="CMS_0727" /old_locus_tag="CMS0727" /note="primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="YP_001709490.1" /db_xref="GI:170781158" /db_xref="GeneID:6156665" /translation="MSTKSRTRSKTRLSRALGIPLTPKAAKYLEKRPYAPGEHGRSKR KQDSDYAVRLREKQRLRAQYGIREAQLKIAFQEARRTQGLTGENLVEILEQRLDALVV RSGLARTTAQARQLVVHRHIMVDGKIVDRPSFRVKAGQMIHVKPRSEGTEPFQVAAAG GHADVLPKLPPYLEVELDKLQARLVRLPKRAEVPVTCEVQLVVEYYAAR" misc_feature 774317..774586 /gene="rpsD" /locus_tag="CMS_0727" /old_locus_tag="CMS0727" /inference="protein motif:HMMPfam:PF00163" /note="HMMPfam hit to PF00163, Ribosomal protein S4, score 4.1e-14" misc_feature 774581..774655 /gene="rpsD" /locus_tag="CMS_0727" /old_locus_tag="CMS0727" /note="PS00632 Ribosomal protein S4 signature." misc_feature 774587..774730 /gene="rpsD" /locus_tag="CMS_0727" /old_locus_tag="CMS0727" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 7.2e-19" gene 775108..775329 /locus_tag="CMS_0728" /old_locus_tag="CMS0728" /db_xref="GeneID:6156666" CDS 775108..775329 /locus_tag="CMS_0728" /old_locus_tag="CMS0728" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709491.1" /db_xref="GI:170781159" /db_xref="GeneID:6156666" /translation="MKNLVLIAVGVAIGFAVAHVVDRTPAGHRLFQDVEARARRFGEA VEHGYRSREAELRSVVGEAEDTITELGKQ" sig_peptide 775108..775176 /locus_tag="CMS_0728" /old_locus_tag="CMS0728" /note="Signal peptide predicted for CMS0728 by SignalP 2.0 HMM (Signal peptide probability 0.949) with cleavage site probability 0.653 between residues 23 and 24" misc_feature 775117..775170 /locus_tag="CMS_0728" /old_locus_tag="CMS0728" /note="1 probable transmembrane helix predicted for CMS0728 by TMHMM2.0 at aa 4-21" gene 775335..777992 /gene="alaS" /locus_tag="CMS_0729" /old_locus_tag="CMS0729" /db_xref="GeneID:6156667" CDS 775335..777992 /gene="alaS" /locus_tag="CMS_0729" /old_locus_tag="CMS0729" /note="Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /protein_id="YP_001709492.1" /db_xref="GI:170781160" /db_xref="GeneID:6156667" /translation="MQTADIRNAWLTYFGDRGHTVVPSASLVSDDPTLLFTVAGMVPF VPYLTGVVPAPFARATSVQKCIRTLDIEEVGRTPRHGTFFQMNGNFSFGDYFKEQAIA YAWELLTTSEADGGLGFSPDDLWVTVYHEDDEARQAWKRIAGLPDERIQGLGRDTNYW HTGQPGPAGPCSEIFFDRGPAYGADGGPATDDDRYVEIWNLVFMQYLRGAGTGKSDFE ILGDLPTRNIDTGMGLERVAFIKQGVENMYETDQVRPVLDRAAELSGRRYGADHEDDV RMRIVADHVRSSVMLMSDGVRPSNEGRGYILRRLMRRTVRAMRLMGVDAATFGELFPA SRDAMKAAYPEVSDDFDRISRLAYAEEETFLRTLSGGTTILDVAVGETKAKGGERIAG DTAFLLHDTFGFPIDLTLEMAEENGLTVDREAFDRLMLEQRTRAKADAKSKKTALADL TVYSEFRAAGETRFTGYDELETGTTILGLIVGGHSVDHAVAGDIAEVILPETSLYAES GGQEADAGSIVGQGFDLEVLDVQKPVKGLISHRVQVRSGEVGVGDAATTIVDADWRRG ATQAHSGTHLVHAALRQVLGQDAHQSGSYNRAGYMRLDFAWNQALSPATRSEIEDIAN GAVRDDLQVVTRVMPIDEAKQLGAMALFGEKYGDTVRVVDIGGPWSRELCAGTHVSSS AQIGLINVVGESSVGSTNRRIESLVGREAFQDLAVERAIVSQLTSSLKTPREQLPDRI ADLLQNLKTAERRIADFEAQALQQRVPTLLAQGSRVGSVTLIQESLGSVRSADEVRQL VTLVRERAGSDPVVVALAGDAGGKPTVIVATNQAARDAGAKAGQLARAAAAVLGGGGG GKDDLAQGGGSDVSAIGEALAAVRQALDS" misc_feature 775347..777473 /gene="alaS" /locus_tag="CMS_0729" /old_locus_tag="CMS0729" /inference="protein motif:HMMPfam:PF01411" /note="HMMPfam hit to PF01411, Alanyl-tRNA synthetase,class IIc, score 0" misc_feature 777759..777977 /gene="alaS" /locus_tag="CMS_0729" /old_locus_tag="CMS0729" /inference="protein motif:HMMPfam:PF02272" /note="HMMPfam hit to PF02272, Phosphoesterase, DHHA1,score 4.4e-13" gene 777992..778477 /locus_tag="CMS_0730" /old_locus_tag="CMS0730" /db_xref="GeneID:6156668" CDS 777992..778477 /locus_tag="CMS_0730" /old_locus_tag="CMS0730" /note="similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase-like protein" /protein_id="YP_001709493.1" /db_xref="GI:170781161" /db_xref="GeneID:6156668" /translation="MRVGSRLAVDVGKARIGLARSDPHGLIATPVETVPRDAAGSADV RRILEVAAEIDCTELVVGLPLALSGRATASTDDAEGFARRLADATEIRVRLVDERLST VSAQGALRASGRGSRKQKPVIDQVAAVIILQHALETERAAGSPPGALVPRNRVDPDRH A" misc_feature 778001..778405 /locus_tag="CMS_0730" /old_locus_tag="CMS0730" /inference="protein motif:HMMPfam:PF03652" /note="HMMPfam hit to PF03652, Conserved hypothetical protein 250, score 2.3e-41" gene 778995..780005 /locus_tag="CMS_0731" /old_locus_tag="CMS0731" /db_xref="GeneID:6156669" CDS 778995..780005 /locus_tag="CMS_0731" /old_locus_tag="CMS0731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709494.1" /db_xref="GI:170781162" /db_xref="GeneID:6156669" /translation="MLFGGAAVIATSLFGPVVSALLTPAEPTDYDGDGSGEVQVVVKT GDTGSTIGDTLASQDVVKTSKAFYQAVVASGGEVVFQPGTYILRKQMSAASALAMLQD PSSQSQAKVTIPEGQTAAQAFELIAEGTGTPVADLEAAAADRAALGIPSEAPNIEGYL FPATYDFPPGTSATDMVKAMVSRTFEALDQAGVPVADRHRVLTLAALIQKEARFEGDF YKVSRVFQNRIAIGMPLQSDATVAYGAQSVGRVTTTDAERADDNPWNTYVHPGLPVGP ISNPGDLAIKAALAPADGPWLYFVTVNTITGDTVFSETYEEHQKAVAQWQQFMKDNPG NG" sig_peptide 778995..779069 /locus_tag="CMS_0731" /old_locus_tag="CMS0731" /note="Signal peptide predicted for CMS0731 by SignalP 2.0 HMM (Signal peptide probability 0.960) with cleavage site probability 0.491 between residues 25 and 26" misc_feature 779106..779978 /locus_tag="CMS_0731" /old_locus_tag="CMS0731" /inference="protein motif:HMMPfam:PF02618" /note="HMMPfam hit to PF02618, Protein of unknown function DUF175, score 1.8e-99" gene 779998..780888 /locus_tag="CMS_0732" /old_locus_tag="CMS0732" /db_xref="GeneID:6156670" CDS 779998..780888 /locus_tag="CMS_0732" /old_locus_tag="CMS0732" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /protein_id="YP_001709495.1" /db_xref="GI:170781163" /db_xref="GeneID:6156670" /translation="MADPRTPAVRLAVLGSPIAHSLSPRLHAAAYGVLGLGWSYEAVE CTGAQLPAFVDGLGSGWRGLSLTMPLKRDVVPLLDRLDDTARLAGAANTLLLEREPAG AIVRRGANTDVAGIVRALDVAGVERSQRAVVLGAGSTARSAVVALARMGAREVVVAAR RPEQGRELAPLADELGVALRTAPLDDADAALREADTVISTLPGDAAAAVPLPGGLPEA TVLLDVTYAPWPTGIAAGWEHAGGWVVPGIDMLVHQALDQVRLFVAGDADLPLPDEER VLAAMLSSVGRDPDRAWTGA" misc_feature 780073..780792 /locus_tag="CMS_0732" /old_locus_tag="CMS0732" /inference="protein motif:HMMPfam:PF01488" /note="HMMPfam hit to PF01488, Shikimate/quinate 5-dehydrogenase, score 4.8e-45" gene 780892..782214 /locus_tag="CMS_0733" /old_locus_tag="CMS0733" /db_xref="GeneID:6156671" CDS 780892..782214 /locus_tag="CMS_0733" /old_locus_tag="CMS0733" /note="catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="YP_001709496.1" /db_xref="GI:170781164" /db_xref="GeneID:6156671" /translation="MGPSRQLREAVDLGPAVGPSLPLWEDGGMLRWLTAGESHGPELI AVLEGLPAGVPVSLDGIRADLARRKLGYGRGARMAFEQDELSLSTGVVHGRTLGSPIA VRIGNTEWPKWVDIMSPEPVDAEKLQGARAAALTRPRPGHADLVGMQKYDFDEARPVL ERASARETAARVALGAVARAFLAELGITLVSHTLAIGPVRVPEGAPLPTPADVDALDA DPLRCFHPETSARMVAEVDDTKSSGDTVGGVVEVLAYDLPPGLGSHVHWDRRLDSKLA GALMGIQAIKGVEVGDGFLTTTRRGSEAHDELFSTAAGIGRSTDRAGGTEGGMSTGSV LRVRAGMKPIATVPRALRTIDTATGGAAPANHQRSDVCAVPAAGVVAEAMVALTLADA VLEKFGGDSVGETLRNLRGYLDAIPEGRRTGADLVDEADAAPPAPPEA" misc_feature 780979..782082 /locus_tag="CMS_0733" /old_locus_tag="CMS0733" /inference="protein motif:HMMPfam:PF01264" /note="HMMPfam hit to PF01264, Chorismate synthase, score 6.3e-154" misc_feature 781372..781416 /locus_tag="CMS_0733" /old_locus_tag="CMS0733" /note="PS00788 Chorismate synthase signature 2." misc_feature 781993..782043 /locus_tag="CMS_0733" /old_locus_tag="CMS0733" /note="PS00789 Chorismate synthase signature 3." gene 782217..782708 /locus_tag="CMS_0734" /old_locus_tag="CMS0734" /db_xref="GeneID:6156672" CDS 782217..782708 /locus_tag="CMS_0734" /old_locus_tag="CMS0734" /codon_start=1 /transl_table=11 /product="shikimate kinase I" /protein_id="YP_001709497.1" /db_xref="GI:170781165" /db_xref="GeneID:6156672" /translation="MPVVLIGPPGAGKTTVGRRVAKALGLPFTDTDRVIVQAHGSIAD IFREHGEPRFRELERAAVATALADDGVVSLGGGAVLDPATRADLEACRVVLLTVSEHA VRARIRGDDRPLVDGLDSWRRIVADREELYRSLADLTIDTSDRPLPRIAGEIERFARE RQP" misc_feature 782235..782258 /locus_tag="CMS_0734" /old_locus_tag="CMS0734" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 782241..782693 /locus_tag="CMS_0734" /old_locus_tag="CMS0734" /inference="protein motif:HMMPfam:PF01202" /note="HMMPfam hit to PF01202, Shikimate kinase, score 3.7e-48" misc_feature 782379..782453 /locus_tag="CMS_0734" /old_locus_tag="CMS0734" /note="PS01128 Shikimate kinase signature." gene 782705..783835 /gene="aroB" /locus_tag="CMS_0735" /old_locus_tag="CMS0735" /db_xref="GeneID:6156673" CDS 782705..783835 /gene="aroB" /locus_tag="CMS_0735" /old_locus_tag="CMS0735" /note="catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="YP_001709498.1" /db_xref="GI:170781166" /db_xref="GeneID:6156673" /translation="MTDQNAPAPDSVDRAAAEPDAPTVIRVSGTPGYDVTVGRGLVQG VGALLGPRVRKVLIVHAPALAEEASRLRERLQGDVEVYLAEVPDAEGAKRVEVAAFCW KIMGTTDFTRSDAVITLGGGATTDLGGFVAATWLRGVMLIQIPTTVLAMVDAAVGGKT GINTSEGKNLVGAFYAPTAVIVDLDLLATLPRNEIVTGFAEIVKAGFIAVPEILDIIE RDVARVTDPTSPEFRRVVELSIAMKAEVVGEDFTEKGRREILNYGHTLGHAIEHAERY RWRHGAAVAVGMVFAAELSRLTRSLSDEAVDRHRRILDSLDLPTSYPVGRWPTLVASM KRDKKARGDMMRFIVLDGVGRASVLNGPEEALLFAAYQEIGS" misc_feature 782813..783727 /gene="aroB" /locus_tag="CMS_0735" /old_locus_tag="CMS0735" /inference="protein motif:HMMPfam:PF01761" /note="HMMPfam hit to PF01761, 3-dehydroquinate synthase,score 6e-117" gene 783832..784620 /locus_tag="CMS_0736" /old_locus_tag="CMS0736" /db_xref="GeneID:6156674" CDS 783832..784620 /locus_tag="CMS_0736" /old_locus_tag="CMS0736" /codon_start=1 /transl_table=11 /product="putative short chain oxidoreductase" /protein_id="YP_001709499.1" /db_xref="GI:170781167" /db_xref="GeneID:6156674" /translation="MSDPASGPAADPRPVALVTGVGGVSGIGAAVAESLALDGWDVAF AYWSGYDERMPWGRQPEDPARVAEAVVRAGGRVQAMEADLLDTDAAERLLEGAERELG PITALVLAHCESVDSPLLDTTVEVLDRHLAVNVRASLQLIQGFARRYRAVPGAGRIVA LTSDHVVGNVPYGASKAALDRIVIASARELEDVRITANLVDPGPTDTGWFTPEIRAHL EETTPRGRLAEPRDAAALVSFLLSAEGGWINGQRIRSDGGQSVG" misc_feature 783874..783942 /locus_tag="CMS_0736" /old_locus_tag="CMS0736" /note="1 probable transmembrane helix predicted for CMS0736 by TMHMM2.0 at aa 15-37" misc_feature 783877..784608 /locus_tag="CMS_0736" /old_locus_tag="CMS0736" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.6e-26" gene 784728..785690 /locus_tag="CMS_0737" /old_locus_tag="CMS0737" /db_xref="GeneID:6156675" CDS 784728..785690 /locus_tag="CMS_0737" /old_locus_tag="CMS0737" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709500.1" /db_xref="GI:170781168" /db_xref="GeneID:6156675" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGVPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 784800..784865 /locus_tag="CMS_0737" /old_locus_tag="CMS0737" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 25-46, sequence RPVSHVARELGVSRQCAHRWVA" misc_feature 785136..785678 /locus_tag="CMS_0737" /old_locus_tag="CMS0737" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(785701..786315) /locus_tag="CMS_0738" /old_locus_tag="CMS0738" /db_xref="GeneID:6156676" CDS complement(785701..786315) /locus_tag="CMS_0738" /old_locus_tag="CMS0738" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709501.1" /db_xref="GI:170781169" /db_xref="GeneID:6156676" /translation="MTRIVAGFAGSLVLRVPRTGTRPTSDRVREALFSGLEARDALDG ARVLDLYAGSGALGLEAASRGAREVVLVERAVPAAAVCRSNAGIVERAAPRGTELRIR VAAQSVHAFLAGDRGSYDVAFLDPPYEVGDAELADELAALVPRLVDGAVVMVERSARS AEPTWPAGLELDRRKAYGDTVVWWAVAGSPDDDPEPDDAGEPAS" misc_feature complement(785758..786312) /locus_tag="CMS_0738" /old_locus_tag="CMS0738" /inference="protein motif:HMMPfam:PF03602" /note="HMMPfam hit to PF03602, Conserved hypothetical protein 95, score 3.5e-50" misc_feature complement(785932..785952) /locus_tag="CMS_0738" /old_locus_tag="CMS0738" /note="PS00092 N-6 Adenine-specific DNA methylases signature." gene 786579..787553 /locus_tag="CMS_0739" /old_locus_tag="CMS0739" /db_xref="GeneID:6156677" CDS 786579..787553 /locus_tag="CMS_0739" /old_locus_tag="CMS0739" /codon_start=1 /transl_table=11 /product="putative ATPase" /protein_id="YP_001709502.1" /db_xref="GI:170781170" /db_xref="GeneID:6156677" /translation="MPLEEVRRLAELILGNIDSVMSGKHEATRMALTVFLSGGHLLIE DVPGVGKTMLAKALARSVDCTVNRIQFTPDLLPSDVTGVSVYSQADHRFEFQPGAVFA NIVIGDEINRASPKTQSALLECMEEGQVTVDGVTHPLQQPFTVVATQNPVEMEGTYAL PEAQRDRFMARISMGYPDAAAELAMLRSRDTVSPLDELRPVVDAEELDAMMHAARGVY VSDPVSRYAVAIVQATRGHEDIRLGASPRATLQLIRAAKTRAALDGRDFVLPDDIDAL AAPVLAHRLVATGRALGQRGRGQAAVVEILERIVSSTAVPLSAAGRTR" misc_feature 786696..787346 /locus_tag="CMS_0739" /old_locus_tag="CMS0739" /inference="protein motif:HMMPfam:PF07728" /note="HMMPfam hit to PF07728, ATPase family associated with various cellular activities (AAA)" misc_feature 786696..787088 /locus_tag="CMS_0739" /old_locus_tag="CMS0739" /inference="protein motif:HMMPfam:PF07726" /note="HMMPfam hit to PF07726, ATPase family associated with various cellular activities (AAA)" gene 787558..788886 /locus_tag="CMS_0740" /old_locus_tag="CMS0740" /db_xref="GeneID:6156678" CDS 787558..788886 /locus_tag="CMS_0740" /old_locus_tag="CMS0740" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709503.1" /db_xref="GI:170781171" /db_xref="GeneID:6156678" /translation="MRSLARLMRRIGIEAVPHPTLRGIALLAAGVAAFAGAFIAGRRE FLFIGVALLALPLLAAAWLVIARVRLHVERTFTSEVVESGTATTVTVSVANSGSMPTP RSWVLDLVPGSDGATPPVELPSMRGLARGSRRSSARAVLRYDLTPERRGIHEVGPLAV EEHDPFRLMGLRHVAGGTSRLVVTPRLTDLEAEPGGQVSSEGESERVQRRADGGEDDL GTREYRAGDPLRRVHWRATARHGELMVRQEEQRSSPRSLVLLDTRAAGFPLHADDDGD GDRAFERAVAFAASVSVHLQRGGYAVHLVETAAGSDRQALVSARPGDAAAEGDLLLHL AEVQPAAVDPDRDGVQEALADLRRSRRAVPMHAVLGHLDEQEARRLAGFGAACRPAVA FLAHAGRVDGRDDREALRILREAGWRTVVLDDDTRPADAWSAARTEEMAR" sig_peptide 787558..787668 /locus_tag="CMS_0740" /old_locus_tag="CMS0740" /note="Signal peptide predicted for CMS0740 by SignalP 2.0 HMM (Signal peptide probability 0.932) with cleavage site probability 0.545 between residues 37 and 38" misc_feature order(787618..787677,787687..787755) /locus_tag="CMS_0740" /old_locus_tag="CMS0740" /note="2 probable transmembrane helices predicted for CMS0740 by TMHMM2.0 at aa 21-40 and 44-66" misc_feature 787999..788310 /locus_tag="CMS_0740" /old_locus_tag="CMS0740" /inference="protein motif:HMMPfam:PF01882" /note="HMMPfam hit to PF01882, Protein of unknown function DUF58, score 8.4e-27" gene 789082..791427 /locus_tag="CMS_0741" /old_locus_tag="CMS0741" /db_xref="GeneID:6156679" CDS 789082..791427 /locus_tag="CMS_0741" /old_locus_tag="CMS0741" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709504.1" /db_xref="GI:170781172" /db_xref="GeneID:6156679" /translation="MALLAGSASLHLLVEPGAWFLLCVLVVAAVLGSAALLRAAGVPR LLASVGGLVLLVLLVTLVFAGRTAVLGLIPTPETLRTLLAVGEQAGDEIYRRSAPVPP LASIVFVIVASIGALAVVLDVLAHALRMPAVTGLPLLVLVSVPGAVLVGEFSVWSFAV TALAWFAVLAADARETDRDDGWRGSGLLGGSRLAPPSAPHRSSSGRPAGSARTTLVSA GALAGVAVVLSLVAPAIVPGLTSATFPTSSASGQGGSRVVNPILDLGDDLRRPVDVEA LRYSTASKTPLYFKVTTLSRFEGDEWAPSPLRPPDGNTVDAIGPDLGSGSDVPAEEVE ARVQVEGSSSAWLPAPYAPRSVTGLEGSWRWSEQGLAIRSSDSDSRDQSYTVTSELPR PERDQLEAVAPATDDDLAPYLQIPSGTPAIVASTTADVLAGIDTPYDQALALQEFFTG GQFRYSEDAPVQQGYDGSGVDVVGEFLRVRSGYCVHFASAMAIMAREAGIPSRVAVGY LPGDQVGRDGDLITYRVGSHDLHSWPELYFSGIGWIAFEPTPGRGQAAPYAQPSAAPT TAPTPSATPSATAEATPTATPAPTTSAAPGTSGATAVRIPWAGLGTAALVLLVLALLA TPALLRRARRAGRLRALEAGDAAAGTAWHEVEDRAVDLGIRTPDTESPRELGRRLQGD DPSLADPVALLVTARERERFARADVPVDAAAGAAQAAALVALGDALRARAGRVDRILA LVAPRSLVRRRPRSDEGPDDGTAGAPPSGAPASDVPRTLGG" sig_peptide 789082..789198 /locus_tag="CMS_0741" /old_locus_tag="CMS0741" /note="Signal peptide predicted for CMS0741 by SignalP 2.0 HMM (Signal peptide probability 0.766) with cleavage site probability 0.468 between residues 39 and 40" misc_feature order(789124..789192,789205..789273,789388..789456, 789475..789528,789538..789591,789724..789792, 790900..790968) /locus_tag="CMS_0741" /old_locus_tag="CMS0741" /note="7 probable transmembrane helices predicted for CMS0741 by TMHMM2.0 at aa 15-37, 42-64, 103-125, 132-149,153-170, 215-237 and 607-629" misc_feature 790516..790728 /locus_tag="CMS_0741" /old_locus_tag="CMS0741" /inference="protein motif:HMMPfam:PF01841" /note="HMMPfam hit to PF01841, Transglutaminase-like,score 7.1e-17" gene 791424..793607 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /db_xref="GeneID:6156680" CDS 791424..793607 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /EC_number="3.6.1.-" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase RecG" /protein_id="YP_001709505.1" /db_xref="GI:170781173" /db_xref="GeneID:6156680" /translation="MTGSGAALAGVVGGRTAGVLQKAFGLRTVADLLEHLPRRYARRG ELTALAELPVDQQATIVAEVREVRERPMRARRGSILEVRITDGRGFLTLTFFNQAWRA KDLVPGVRGIFAGKVSDYRGALQLAHPDYELFDAHEGPELSGGEPDAAARRWAEMPIP IYPASASMASWQVAKSVELALDAVDDLEDPVPADVRAERGLLPYREALEGVHRPEKDV DWKRGRDALRFQEAFVLQTALLQRRQAARALPATPRIPTPGGHLDRLDAQLPFELTGD QRLVGEEIATDMARTWPMNRLVQGEVGSGKTLVALRAMLAVADSGGQSALLAPTEVLA SQHLRSLTASLGPDLAAELMPTLLTGQLSTAERKRALLRIVSGQARIVVGTHALLGDR VGFLDLGLVVVDEQHRFGVDQREALRRKGGTPPHVLVLTATPIPRTVAMTVFGDLDVS TIAELPSGRQPIESFVVPLHEHPGWIERVWERTAEEIQKGRQAFVVCPAIDPQDPDAE DEDAGEGAEDAPTRPSLATVTEVDALLGAHPRLGSVRRAVLHGRMTGEEKDRVMRAFS AGDIDLIVATTVIEVGVDVPNASTMVILDADRFGVSQLHQLRGRVGRGGVPGLCLMVT HAEPETVARERVDAVAATLDGFELARVDLELRREGNVLGTNQSGGRSSLRLLRVAQDG DLIESAREHAHDVLEASPDLADQPALGRALARRLDDEERAFLDKN" misc_feature 791595..791825 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 1.8e-07" misc_feature 792240..792749 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 2.9e-31" misc_feature 792321..792344 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 793035..793268 /gene="recG" /locus_tag="CMS_0742" /old_locus_tag="CMS0742" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 3.8e-22" gene 793633..794124 /gene="coaD" /locus_tag="CMS_0743" /old_locus_tag="CMS0743" /db_xref="GeneID:6158922" CDS 793633..794124 /gene="coaD" /locus_tag="CMS_0743" /old_locus_tag="CMS0743" /EC_number="2.7.7.3" /note="Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA" /codon_start=1 /transl_table=11 /product="phosphopantetheine adenylyltransferase" /protein_id="YP_001709506.1" /db_xref="GI:170781174" /db_xref="GeneID:6158922" /translation="MQRIAVVPGSFDPVTLGHLDVIRRAARLYDQLVVLVVHNPGKTP MLPLEDRVDLIERVIRDAGLPATVRVDSWGAGLLVDYCRQVGATVLVKGVRSQLDVAY ETPMALVNRDLADVETVMLLPDPAHAHVSSSLVRQVEALGGDVAPYVPAAVAEALAVR RAG" misc_feature 793648..794046 /gene="coaD" /locus_tag="CMS_0743" /old_locus_tag="CMS0743" /inference="protein motif:HMMPfam:PF01467" /note="HMMPfam hit to PF01467, Cytidylyltransferase, score 1.5e-15" gene 794144..794716 /locus_tag="CMS_0744" /old_locus_tag="CMS0744" /db_xref="GeneID:6158640" CDS 794144..794716 /locus_tag="CMS_0744" /old_locus_tag="CMS0744" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709507.1" /db_xref="GI:170781175" /db_xref="GeneID:6158640" /translation="MSRFQKTPFTVHVHDIVHRPGEMRELDLTIVTPERMGEGLIAVP AGREMRVTVRLESLHDGILVTGEVDTVADGQSARTLADMQERVQVDFAELFAYGLDEA FDYQVQDEHVDLEPVIRDAVVLSLPFQPEVPGEDLDLDLGPGISLVLADSEPEPVIDQ RWAALSGFRASEDSGAAREDADTETQRDES" misc_feature 794192..794653 /locus_tag="CMS_0744" /old_locus_tag="CMS0744" /inference="protein motif:HMMPfam:PF02620" /note="HMMPfam hit to PF02620, Protein of unknown function DUF177, score 6.9e-15" gene 794720..794923 /gene="rpmF" /locus_tag="CMS_0745" /old_locus_tag="CMS0745" /db_xref="GeneID:6156681" CDS 794720..794923 /gene="rpmF" /locus_tag="CMS_0745" /old_locus_tag="CMS0745" /note="some L32 proteins have zinc finger motifs consisting of CXXC while others do not" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="YP_001709508.1" /db_xref="GI:170781176" /db_xref="GeneID:6156681" /translation="MAVPKRKMSRSNTRARRSQWKAEAPTLVKTIENGKVVYSMPHRA RVIEDAAGTPLYMEYKGRKVADV" misc_feature 794723..794866 /gene="rpmF" /locus_tag="CMS_0745" /old_locus_tag="CMS0745" /inference="protein motif:HMMPfam:PF01783" /note="HMMPfam hit to PF01783, Ribosomal L32p protein,score 9.7e-08" gene 794949..795665 /gene="rnc" /locus_tag="CMS_0746" /old_locus_tag="CMS0746" /db_xref="GeneID:6158958" CDS 794949..795665 /gene="rnc" /locus_tag="CMS_0746" /old_locus_tag="CMS0746" /note="cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="YP_001709509.1" /db_xref="GI:170781177" /db_xref="GeneID:6158958" /translation="MTDTQGSRVHGDRDALRRLLAVDVSPELLELALTHRSYAYEHGG IPHNERLEFLGDSILGQAVTVMLYLENPDLDEGELAKRRASLVSSVALAEVATRIGLG EHLLLGRGEELTGGRAKSSILADTVEAIIGASYLDAGGEAATGLVLRLIAPLLEDPAR FGAAMDPKTALQESAARQGLPAPAYDVSDSGPDHSKRFHAVVTVGDAVRTTGEGSSKK QAEMTAALEAWTRLEARTTA" misc_feature 795093..795365 /gene="rnc" /locus_tag="CMS_0746" /old_locus_tag="CMS0746" /inference="protein motif:HMMPfam:PF00636" /note="HMMPfam hit to PF00636, Ribonuclease III, score 5.2e-41" misc_feature 795093..795119 /gene="rnc" /locus_tag="CMS_0746" /old_locus_tag="CMS0746" /note="PS00517 Ribonuclease III family signature." misc_feature 795447..795644 /gene="rnc" /locus_tag="CMS_0746" /old_locus_tag="CMS0746" /inference="protein motif:HMMPfam:PF00035" /note="HMMPfam hit to PF00035, Double-stranded RNA binding, score 5.3e-19" gene 795672..796607 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /db_xref="GeneID:6156682" CDS 795672..796607 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /note="Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="YP_001709510.1" /db_xref="GI:170781178" /db_xref="GeneID:6156682" /translation="MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAF VDLLVGRVITSAVRRGKFMWLPLEPEPTGDRTGPRALVTHLGMSGQVLLREPGSDPDG LLRIRMGIEHPAHGELVVAFVDQRIFGSMAVDRLVATPDGHAGGRGSTAALVPTQVAH IARDPLDPAFDDEQLLSRLARRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHP TDQLGRGRALRLLAEVRHVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKP CPRCGTPIVREAFMNRGSHFCPRCQALPDPDAAAA" misc_feature 795672..796073 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /inference="protein motif:HMMPfam:PF01149" /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA glycolase, score 3.9e-27" misc_feature 796152..796430 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /inference="protein motif:HMMPfam:PF06831" /note="HMMPfam hit to PF06831, Formamidopyrimidine-DNA glycolase, score 9.2e-40" misc_feature 796491..796580 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /inference="protein motif:HMMPfam:PF06827" /note="HMMPfam hit to PF06827, FPG and IleRS zinc finger,score 4.1e-10" misc_feature 796500..796574 /locus_tag="CMS_0747" /old_locus_tag="CMS0747" /note="PS01242 Formamidopyrimidine-DNA glycosylase signature." gene complement(796620..797738) /locus_tag="CMS_0748" /old_locus_tag="CMS0748" /db_xref="GeneID:6156683" CDS complement(796620..797738) /locus_tag="CMS_0748" /old_locus_tag="CMS0748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709511.1" /db_xref="GI:170781179" /db_xref="GeneID:6156683" /translation="MPHSDDDLAFDVVEVRPPVVVGSAGWDDFVALTDVVNRAQSHDL GHDAFVWLPEELIADYADVEHVRKRLFAARVDSRVVGRGLLTTWLHDPTTSDVAVSVL PEHRRRGIGRALRERVERIAVDEGCRTLTGFTMHRPEATGAPIPSPAGIGAVGADDPS SRFVVDAGYRLGQTARTSSLDTASAAPTLDAHLADARLAAGDAYRVISWVDATPERLL DDLAVLHTRMSTDAPQGDLPQTEDPWDSDRIRAAEARRASSGRVGLTTAAEHVATGQL VGFTEIAVSPSGRRSDGHAYSYQQDTLVLAEHRGHRLGMLLKAENLRHLARQAPEVDR VVTWNADENRPMLRVNEALGFAHVGTSGSWLREVGPAR" misc_feature complement(797262..797282) /locus_tag="CMS_0748" /old_locus_tag="CMS0748" /note="PS00485 Adenosine and AMP deaminase signature." misc_feature complement(797316..797528) /locus_tag="CMS_0748" /old_locus_tag="CMS0748" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3e-06" gene 797891..801616 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /db_xref="GeneID:6156684" CDS 797891..801616 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /codon_start=1 /transl_table=11 /product="putative chromosome structure maintenance protein" /protein_id="YP_001709512.1" /db_xref="GI:170781180" /db_xref="GeneID:6156684" /translation="MHLKSLTLKGFKSFAQPTTFQFETGVTCVVGPNGSGKSNVVDAL AWVMGEQGAKTLRGGKMEDVIFAGTSTRGPLGRAEVTLTIDNADGALPIDYTEVAIRR TLFRNGGSEYAINGTSCRLLDVQELLSDSGLGREMHVIVGQGRLDNVLRATPEERRGF IEEAAGILKHRRRKERTLRKLEGMQANLTRLNDLAGEIRRQLKPLGRQAEVARQAQTV AAVVRDARARLVADEVVTLRRALAEHTRTEEERTTERMVLQEKLDRAVLRSERIVEEQ EGDEVDGARRTAFALEQVQERLRNLLSLAQQRLALLGSADDAPETAAGTTPGQVQESR DEAERLVALIAEAEAGWASARQATAAARQALDALDEEIQAQSALVSRHDLEIAGLTGR AETAGSRLAAVRGEVLRQQNALDAARARLAAAEAERERGEAEGEADEQGGSELTRAYE DAQADVASEESAIEAVREELHAKERERDALAAREQALASALDQRDGSSDLVAAGMPGV RGLLAEHVHVQPGYEAAVAAALGSLADAVLAETHDDAVAALRRAVDDDLGRVEVVVAG SADGRVAEPTGGAPGPVPVSSVVDAPDGVRRILAGVVVVDDLAQAVELARSPGSPATV ITRGGDVVSAHVLRGGSGATRSKLELVAAREAAAATLTGVRARIDDLQVDLAAGRERL RAARERASAALGGLREADARLAAHAERLSRSRAQAESAAAELARVQRGLDLASASVEE AVAANDAARRALDEARSRPRPVLDASGRDALVAEWEAAREAEIEARLQVETARERVRA EQERTVSLERRLAAERAAAEEAARRQVIRRRQIARAASVADALPAVVRAADRSTAEAR LVLARAEESRAGRNAELAALRREEAELRERLHGITEDVHGLELQIYEKRLQVSQLLER AASELGLGEEVLVAEYGPDVPVPEEAPLPPRQRQPAATDARDDADADQEEDGQSADTA DDATPDADRSADPAVDDDDEPGPTRPFDREEQKARLQVAERKLAQLGRVNPLALEEFA ALEQRHLFLTEQLADLTATRKDLLTIIDDIDRTMQGVFAAAFEDTRQAFDRVFPILFP GGTGSIHLTDPEQLLTTGIEVSVRPAGKRIERLSLLSGGERSLAAVALLIAIFTARPS PFYIMDEVEAALDDANLGRLLTILEQLRDTSQLIVITHQKRTMEIADALYGVSMRQDG VSAVVGQRVSRDARTETAPGAAGEAAPEPAREEQAAS" misc_feature 797891..798391 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /inference="protein motif:HMMPfam:PF02463" /note="HMMPfam hit to PF02463, SMC protein, N-terminal,score 1.9e-70" misc_feature 797981..798004 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 799403..799816 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /inference="protein motif:HMMPfam:PF06470" /note="HMMPfam hit to PF06470, SMCs flexible hinge, score 2.6e-19" misc_feature 800921..801529 /locus_tag="CMS_0749" /old_locus_tag="CMS0749" /inference="protein motif:HMMPfam:PF02483" /note="HMMPfam hit to PF02483, Structural maintenance of chromosome protein SMC, C-terminal, score 4.8e-98" gene 801637..802512 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /db_xref="GeneID:6156685" CDS 801637..802512 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /codon_start=1 /transl_table=11 /product="signal recognition particle receptor" /protein_id="YP_001709513.1" /db_xref="GI:170781181" /db_xref="GeneID:6156685" /translation="MAARTPWSLSGALRGMFAKPTIDETTWDDLETALITADFGPDVT EATIDDLREKVERYRTTDPRDLQRMLRESIEERLAKHDPTLKLSARPAVILVVGVNGV GKTTTIGKFAKFLRNYGRTAVVGAADTFRAAAVDQLATWADRAGAEIVRPQQPGQDPA SVAFQTVEHAMRTGTEMVIIDTAGRLHTKGGLMDELSKIRRVVEKQSPIAEVLLVLDA TTGQNGLAQAQAFIEHGGVTGLVITKLDGSAKGGFILNVQERTGIPIKLIGQGEGIGD LTGFTPHVFAQNLVG" misc_feature 801637..801873 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /inference="protein motif:HMMPfam:PF02881" /note="HMMPfam hit to PF02881, GTP-binding signal recognition particle SRP54, G-domain, score 3.6e-05" misc_feature 801904..802509 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /inference="protein motif:HMMPfam:PF00448" /note="HMMPfam hit to PF00448, GTP-binding signal recognition particle SRP54, G-domain, score 2.1e-92" misc_feature 801928..801951 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 802426..802467 /gene="ftsY" /locus_tag="CMS_0750" /old_locus_tag="CMS0750" /note="PS00300 SRP54-type proteins GTP-binding domain signature." gene 802561..804132 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /db_xref="GeneID:6158701" CDS 802561..804132 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /codon_start=1 /transl_table=11 /product="signal recognition particle protein" /protein_id="YP_001709514.1" /db_xref="GI:170781182" /db_xref="GeneID:6158701" /translation="MATFGTLSDRLAETFKNLRGKGKLSAADVDGTVREIRRALLEAD VALDVVKAFTASVRERALGGEVSQALNPAQQVVQIVNEELVAILGGQQRRIQFAKRPP TVIMLAGLQGAGKTTLAGKLGKWLAKDGHTPMLVAADLQRPNAVQQLQVVGEQAGVPV FAPEPGNGTGNPVRVAKDAMKHAVGKQYSVVIIDTAGRLGVDAELMKQAADIRKATDP DEVLFVIDAMIGQDAVATAKAFQDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMF ASTGEGLDDFEPFHPDRMASRILDLGDILTLIEQAQQAFDEEEAMEVAQKLASDTFTL DDFLKQMQQLRGKGSLKKMMGMLPGMSAMKEQLENFDEKEIVRTEAIIQSMTKAERQN PKLLNGSRRLRIARGSGMTVTDVNGLVQRFEQASKMMRTVARGGMPQIPGMGPMPGAH SSRKPVQQKKKGSKSGNPAKRAQENAALASGQRIGGPPAPAGSGFGLAGAAKGGANSA PSEEELASLQKFLGR" misc_feature 802570..802827 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /inference="protein motif:HMMPfam:PF02881" /note="HMMPfam hit to PF02881, GTP-binding signal recognition particle SRP54, G-domain, score 1.2e-27" misc_feature 802861..803460 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /inference="protein motif:HMMPfam:PF00448" /note="HMMPfam hit to PF00448, GTP-binding signal recognition particle SRP54, G-domain, score 7.5e-108" misc_feature 802885..802908 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 803377..803418 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /note="PS00300 SRP54-type proteins GTP-binding domain signature." misc_feature 803551..803847 /gene="ffh" /locus_tag="CMS_0751" /old_locus_tag="CMS0751" /inference="protein motif:HMMPfam:PF02978" /note="HMMPfam hit to PF02978, Signal peptide binding (SRP54) M-domain, score 2.3e-45" gene 804268..804648 /locus_tag="CMS_0752" /old_locus_tag="CMS0752" /db_xref="GeneID:6158688" CDS 804268..804648 /locus_tag="CMS_0752" /old_locus_tag="CMS0752" /codon_start=1 /transl_table=11 /product="putative dioxygenase" /protein_id="YP_001709515.1" /db_xref="GI:170781183" /db_xref="GeneID:6158688" /translation="MFAPVTAFSGFSVDDVPAALAFYRGTLGLEVEEVPEMGMLRLML PGSGARVLVYPKPGHEPATFTVLNLAVDDVEAAVVELNARGVETAIYADLPTDARGIM RGHGPDIAWFRDPAGNVLSVIAAD" misc_feature 804268..804633 /locus_tag="CMS_0752" /old_locus_tag="CMS0752" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 0.00018" gene complement(804737..805909) /locus_tag="CMS_0753" /old_locus_tag="CMS0753" /db_xref="GeneID:6156686" CDS complement(804737..805909) /locus_tag="CMS_0753" /old_locus_tag="CMS0753" /codon_start=1 /transl_table=11 /product="putative serine protease" /protein_id="YP_001709516.1" /db_xref="GI:170781184" /db_xref="GeneID:6156686" /translation="MILVVAVLAALAGWRRGAIVTIAGLAGIVVGVLLALWITPAFLA LLDQFGVATGISRTFAAAILMLVTTSLVSGILAQVASVLTRLLRPRGAARGLDRGIGA VAGLAAWAVSVWFIGGFLGSSGVIPAVQLASSSRIVQALDRVSPISSGTALSALDDAL HDVGYPRVFANGEEAIADTAAPDADVPEAVQRSAASVVKILSSAPACGTSSSGSGWVV QGDRVVTNAHVVTGSDEVYVQQGGTGELLRADLVVFDPARDVAVLAVPGLTAAPLALG DELAASDEAVVAGYPGGGPYQATGARIREVVEAIGTDIQHEQPVTREVYSVRGTVRPG DSGGALFDAQGRVVGLVFATSTVDAQTGYAMTLDEIAPVLQQAGASAPVDSGRCSV" misc_feature complement(804788..805363) /locus_tag="CMS_0753" /old_locus_tag="CMS0753" /inference="protein motif:HMMPfam:PF00089" /note="HMMPfam hit to PF00089, Peptidase S1, chymotrypsin,score 3.2e-06" misc_feature complement(804887..804922) /locus_tag="CMS_0753" /old_locus_tag="CMS0753" /note="PS00135 Serine proteases, trypsin family, serine active site." misc_feature complement(order(805544..805612,805670..805738, 805781..805849)) /locus_tag="CMS_0753" /old_locus_tag="CMS0753" /note="3 probable transmembrane helices predicted for CMS0753 by TMHMM2.0 at aa 21-43, 58-80 and 100-122" gene complement(805950..807149) /locus_tag="CMS_0754" /old_locus_tag="CMS0754" /db_xref="GeneID:6156687" CDS complement(805950..807149) /locus_tag="CMS_0754" /old_locus_tag="CMS0754" /codon_start=1 /transl_table=11 /product="putative glutamate--cysteine ligase" /protein_id="YP_001709517.1" /db_xref="GI:170781185" /db_xref="GeneID:6156687" /translation="MRGMIGRHPAHAPRDPVDGRTRMQIDFARQPPSRVGIEWELACV DRGSGELAGVAPQILRSFPHDDAHPHVTGEFLTNTVEVVSAPHSRVGHAVDDLARLIE RVVDVADPLGIDLMCAGTHPFSAWPDQDVTPDNERYATLLDRTRWWGRQMMIWGVHVH VGIEDGSKALPILNALLVHLPRFQALSASSPFWSGQETGYASNRALMFQQLPTAGLPP DLTTWADYERLIGDMTHVGVIDHHSELRWDIRPAPKWGTLETRVFDGVSTLGEIASLA ALVQCLVHDLSAALDRGEELPRMQPWFVRENKWRAARYGMDAIIIQDAAGEEALVGDD TRALVERLSPTADALGCEAELRGILDIVDRGASYQRQLRVAEENDGALAPVVTHLVEE LRSGLGR" misc_feature complement(806202..807050) /locus_tag="CMS_0754" /old_locus_tag="CMS0754" /inference="protein motif:HMMPfam:PF04107" /note="HMMPfam hit to PF04107, Glutamate--cysteine ligase,GCS2, score 1.9e-65" gene 807357..807764 /gene="rpsP" /locus_tag="CMS_0755" /old_locus_tag="CMS0755" /db_xref="GeneID:6156688" CDS 807357..807764 /gene="rpsP" /locus_tag="CMS_0755" /old_locus_tag="CMS0755" /note="binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S16" /protein_id="YP_001709518.1" /db_xref="GI:170781186" /db_xref="GeneID:6156688" /translation="MAVKIRLKRLGKIRAPYYRIVVADSRAKRDGRVIEEIGKYHPTE EPSFIEVQSERAQYWLSVGAQPTEQVEALLKLTGDWGRFKGDKDAVSTVRTREAKPAY VADEKKKPVLKPKTEKAAPEAAAPEAEATEEQA" misc_feature 807363..807392 /gene="rpsP" /locus_tag="CMS_0755" /old_locus_tag="CMS0755" /note="PS00732 Ribosomal protein S16 signature." misc_feature 807381..807557 /gene="rpsP" /locus_tag="CMS_0755" /old_locus_tag="CMS0755" /inference="protein motif:HMMPfam:PF00886" /note="HMMPfam hit to PF00886, Ribosomal protein S16,score 2.4e-28" gene 807768..808004 /locus_tag="CMS_0756" /old_locus_tag="CMS0756" /db_xref="GeneID:6158968" CDS 807768..808004 /locus_tag="CMS_0756" /old_locus_tag="CMS0756" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709519.1" /db_xref="GI:170781187" /db_xref="GeneID:6158968" /translation="MLAPALAHLVKGIVEHPDDVSVTSKGSPRGEVLEVRVHPEDLGR VIGRAGRTAKALRTLVSALADGQRVRVDVVDTDS" gene 807982..808617 /gene="rimM" /locus_tag="CMS_0757" /old_locus_tag="CMS0757" /db_xref="GeneID:6156689" CDS 807982..808617 /gene="rimM" /locus_tag="CMS_0757" /old_locus_tag="CMS0757" /note="Essential for efficient processing of 16S rRNA" /codon_start=1 /transl_table=11 /product="16S rRNA-processing protein RimM" /protein_id="YP_001709520.1" /db_xref="GI:170781188" /db_xref="GeneID:6156689" /translation="MWWTPIPEDIVRDPAAFRVGRLTKAHGLKGAVKLELFTDDPDKR FVPGAEFSLQVPDSSPWHGRTLTLTELRWYNSHPVGFFEGVADRTAAESLAKAILWMT PPADEPAEPDAWYDHQLVGLKVLRDGVEVGTVSLVDHFPAQDLLHVDTPSGTVLVPFV QAIVPSVDVEAGTLVITPPLGLFEEIPDEQPTPSATSDAEPGSAPEGDDAR" misc_feature 808033..808296 /gene="rimM" /locus_tag="CMS_0757" /old_locus_tag="CMS0757" /inference="protein motif:HMMPfam:PF01782" /note="HMMPfam hit to PF01782, RimM protein, score 1.2e-09" misc_feature 808312..808530 /gene="rimM" /locus_tag="CMS_0757" /old_locus_tag="CMS0757" /inference="protein motif:HMMPfam:PF05239" /note="HMMPfam hit to PF05239, PRC-barrel, score 3.8e-07" gene 808619..809305 /gene="trmD" /locus_tag="CMS_0758" /old_locus_tag="CMS0758" /db_xref="GeneID:6158936" CDS 808619..809305 /gene="trmD" /locus_tag="CMS_0758" /old_locus_tag="CMS0758" /EC_number="2.1.1.31" /note="methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(1)-)-methyltransferase" /protein_id="YP_001709521.1" /db_xref="GI:170781189" /db_xref="GeneID:6158936" /translation="MRIDIVSIFPEFFGVLDISLLGRARQSGLIDLRLHDLRAFTHDR HRTVDDTPYGGGAGMVMRPEPWGEAMDEVLADDTDPVVIFPSPAGEVFTQAMAQELSA EPHLAFGCGRYEGIDQRVVDHTATRARVRLVSLGDYVLNGGEVAVMAMIEAIGRLVPG VVGNPASLVEESHSDGLLEHPSYTKPPEWRGLAVPDVLRSGNHGAIAAWRREQQLERT RRVRPDLLPD" misc_feature 808679..809302 /gene="trmD" /locus_tag="CMS_0758" /old_locus_tag="CMS0758" /inference="protein motif:HMMPfam:PF01746" /note="HMMPfam hit to PF01746, tRNA (guanine-N1-)-methyltransferase, score 8.1e-119" gene complement(809340..810107) /gene="map" /locus_tag="CMS_0759" /old_locus_tag="CMS0759" /db_xref="GeneID:6159024" CDS complement(809340..810107) /gene="map" /locus_tag="CMS_0759" /old_locus_tag="CMS0759" /EC_number="3.4.11.18" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="YP_001709522.1" /db_xref="GI:170781190" /db_xref="GeneID:6159024" /translation="MMELRTPAEMDQMRPAGEFVASVLTALAAKADVGVNLLDLDREA HRMIRARGAESCYIDYHPSFGAMPFGKVLCTSVNDGVLHGLPHDYRLQDGDLLSLDFA ASVDGWVSDSAVSVIVGTPRAEDVRLIEVTTAALEAGIRAAQPGGRTGDISAAIGAVA TEAGYSVNTDFGGHGVGRTMHSDPHIANQGRPNRGVPLRPGLVIAIEPWFLQSTDEIY TDKDGWTLRSADGSRGAHMEHTVAITESGPLILTARS" misc_feature complement(809349..810077) /gene="map" /locus_tag="CMS_0759" /old_locus_tag="CMS0759" /inference="protein motif:HMMPfam:PF00557" /note="HMMPfam hit to PF00557, Peptidase M24, score 1.5e-54" gene 810179..810670 /locus_tag="CMS_0760" /old_locus_tag="CMS0760" /db_xref="GeneID:6158803" CDS 810179..810670 /locus_tag="CMS_0760" /old_locus_tag="CMS0760" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709523.1" /db_xref="GI:170781191" /db_xref="GeneID:6158803" /translation="MQHSPALGLRRALYRWQFAAVVVLPAWLLVGWAAAGSGGWELLL VMLAVGALGIALLAALGLVLARRSVRTARAVSPADALAMGVVTLAVIGTGTYSVVSTW CAVIAALAVVALVALAIRQLLVETRARMQEVIAVIERDAQPRPPEWKAAEGPDAGRTI RLE" sig_peptide 810179..810277 /locus_tag="CMS_0760" /old_locus_tag="CMS0760" /note="Signal peptide predicted for CMS0760 by SignalP 2.0 HMM (Signal peptide probability 0.747) with cleavage site probability 0.342 between residues 33 and 34" misc_feature order(810215..810283,810302..810370,810389..810457, 810470..810538) /locus_tag="CMS_0760" /old_locus_tag="CMS0760" /note="4 probable transmembrane helices predicted for CMS0760 by TMHMM2.0 at aa 13-35, 42-64, 71-93 and 98-120" gene 810841..811185 /gene="rplS" /locus_tag="CMS_0761" /old_locus_tag="CMS0761" /db_xref="GeneID:6156690" CDS 810841..811185 /gene="rplS" /locus_tag="CMS_0761" /old_locus_tag="CMS0761" /note="this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L19" /protein_id="YP_001709524.1" /db_xref="GI:170781192" /db_xref="GeneID:6156690" /translation="MHILDSVDKASLRSDIPDFRAGDTVKVHVNIVEGSRSRIQVFQG IVIGRQGEGVRETFCVRKVSFQVGVERTFPVHSPVIDHIEVVTRGDVRRAKLYFLRDL RGKKAKIKEKRS" misc_feature 810841..811179 /gene="rplS" /locus_tag="CMS_0761" /old_locus_tag="CMS0761" /inference="protein motif:HMMPfam:PF01245" /note="HMMPfam hit to PF01245, Ribosomal protein L19,score 1.6e-65" gene 811252..812004 /gene="sipU" /locus_tag="CMS_0762" /old_locus_tag="CMS0762" /db_xref="GeneID:6158949" CDS 811252..812004 /gene="sipU" /locus_tag="CMS_0762" /old_locus_tag="CMS0762" /EC_number="3.4.21.89" /codon_start=1 /transl_table=11 /product="signal peptidase I" /protein_id="YP_001709525.1" /db_xref="GI:170781193" /db_xref="GeneID:6158949" /translation="MTDSTAPVGTRSSGRHSGSGSRGWKTFLRDVIVIFVVALLVSIL IKAFLIRSFYIPSASMEDTLQINDRIVVNQLTPRLMPLQHGDVVVFRDPGGWLTPSPE VDKPPLAAAVDWALTTVGLSASDSNDHLIKRLIGLPGDHVVCCNSLGQMSVNDVPLDE PYLKLVPGDTRASDVDFDVTVPADSLWVMGDNRGNSADSRYNVDGPTKGFVPIDHVVG RAFVITWPIDRWSILSDHPETFGDVPDAVPAG" misc_feature 811342..811401 /gene="sipU" /locus_tag="CMS_0762" /old_locus_tag="CMS0762" /note="1 probable transmembrane helix predicted for CMS0762 by TMHMM2.0 at aa 31-50" misc_feature 811411..811719 /gene="sipU" /locus_tag="CMS_0762" /old_locus_tag="CMS0762" /inference="protein motif:HMMPfam:PF00717" /note="HMMPfam hit to PF00717, Peptidase S24, S26A and S26B, score 1.1e-11" misc_feature 811807..811848 /gene="sipU" /locus_tag="CMS_0762" /old_locus_tag="CMS0762" /note="PS00761 Signal peptidases I signature 3." gene 812004..812663 /gene="rnhB" /locus_tag="CMS_0763" /old_locus_tag="CMS0763" /db_xref="GeneID:6158990" CDS 812004..812663 /gene="rnhB" /locus_tag="CMS_0763" /old_locus_tag="CMS0763" /EC_number="3.1.26.4" /note="RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids" /codon_start=1 /transl_table=11 /product="ribonuclease HII" /protein_id="YP_001709526.1" /db_xref="GI:170781194" /db_xref="GeneID:6158990" /translation="MPVADPTFEIEHELLGAGAALVIGCDEVGRGALAGPVAVGMAAV GPDADAFPVGLRDSKMLSEKRREALHPLVSAWAGHSAVGMASAEEVDALGITACLGLA GRRALVELHHLGVPLLDSVVLLDGSHDWLTPALVHPVPVRLRVKADRDCASVAAASVL AKVHRDRLMAAWHEESPEYGWAGNKGYGSPAHLDVIRANGASRIHRRTWLTGVLASPG A" misc_feature 812070..812639 /gene="rnhB" /locus_tag="CMS_0763" /old_locus_tag="CMS0763" /inference="protein motif:HMMPfam:PF01351" /note="HMMPfam hit to PF01351, Ribonuclease HII/HIII,score 1.4e-37" gene 812770..813093 /locus_tag="CMS_0764" /old_locus_tag="CMS0764" /db_xref="GeneID:6158941" CDS 812770..813093 /locus_tag="CMS_0764" /old_locus_tag="CMS0764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709527.1" /db_xref="GI:170781195" /db_xref="GeneID:6158941" /translation="MDDDEFEDYDREVELALYREYRDIVSQFKYVVETERRFYLANEV ELVRRDTEHDFYFELSMTDVWVWDVYRSDRFVKSVRVLTFKDVNVEELSAKEFELPKE LAIDE" gene 813199..813561 /locus_tag="CMS_0765" /old_locus_tag="CMS0765" /db_xref="GeneID:6156691" CDS 813199..813561 /locus_tag="CMS_0765" /old_locus_tag="CMS0765" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709528.1" /db_xref="GI:170781196" /db_xref="GeneID:6156691" /translation="MRMTREQDLGRRGEDLAAQHLIERGYALVERNWRCREGEVDLVM THGGTTVLVEVKTRAGLRYGHPLEAVTRAKAARLRVLAGLWRQAHPERRGPVRIDVVG VVWPRGGQPSVEVVRSAC" misc_feature 813232..813510 /locus_tag="CMS_0765" /old_locus_tag="CMS0765" /inference="protein motif:HMMPfam:PF02021" /note="HMMPfam hit to PF02021, Protein of unknown function UPF0102, score 1.2e-31" gene 813561..815117 /locus_tag="CMS_0766" /old_locus_tag="CMS0766" /db_xref="GeneID:6156692" CDS 813561..815117 /locus_tag="CMS_0766" /old_locus_tag="CMS0766" /codon_start=1 /transl_table=11 /product="putative DNA uptake protein" /protein_id="YP_001709529.1" /db_xref="GI:170781197" /db_xref="GeneID:6156692" /translation="MAVGRTLAVALSGLDGALVDVEADITSQLPGFVLIGLPDAALSQ ARERVRAATGNAGCEFPVRRVTVNLSPAVLPKHGSGFDLAIALAVLAAGGSVSAESVA GTVHLGELGLDGRLRPTHGILPAVLAARRAGVRRVMVPRCHADEASLVPDMRVIAVAG LRDAAIHHGAELEPEPEDDDAGSRAATGTDPTRILGGAEPAEPCLGDVVGNEEAVEAL VVAAAGGHHMFLLGPPGAGKTMLAQRLPGLLPDLDEEAALEVGCIRSLCGERLGPELP VRPPLEAPHHTASAAGIVGGGSGRIRPGAAVRASGGVLFLDEAPEFAGAVLDCLRQPL ESGVISIHRANGVAHFPGRFQLVMAANPCPCGSYGVAGSDCSCPPQARRRYLARLSGP LMDRMDIRLGVRRVTTAVHLAAGDAPRVTTPTARVRVAAARAAAAERWAATPWRTNAH VSGTWLRREARIARGATAALDRALDRGLLTMRGYDRVLRIGWTLADLEGASSPDADHL GRALLLRGAS" misc_feature 813618..814637 /locus_tag="CMS_0766" /old_locus_tag="CMS0766" /inference="protein motif:HMMPfam:PF01078" /note="HMMPfam hit to PF01078, Magnesium chelatase, ChlI subunit, score 6.3e-39" misc_feature 814254..814277 /locus_tag="CMS_0766" /old_locus_tag="CMS0766" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 815114..816550 /gene="smf" /locus_tag="CMS_0767" /old_locus_tag="CMS0767" /db_xref="GeneID:6156693" CDS 815114..816550 /gene="smf" /locus_tag="CMS_0767" /old_locus_tag="CMS0767" /codon_start=1 /transl_table=11 /product="putative DNA-binding/uptake protein" /protein_id="YP_001709530.1" /db_xref="GI:170781198" /db_xref="GeneID:6156693" /translation="MIAQDGVGEEVPRSSGDAERSRVRAPDSARARSVARLGLPAREL DELMASLRPDPGWPGDGAADTDSAEVAARATWSGIAEPGDRVAGAVIGVLGACAALAS LVDGCPADTVVGAMLEAGLDLEPDGRAALVGEVAGALERWRPRVVRSEALARLHAARA VGARVLVPGDPHWPVGADDLGPHSPLVLWCTGAPDAMAALSRSVAIVGARAATGYGEH VTAELAAGLVDRDVAVVSGGAYGIDGAAHRAAIGSAGRTVAFLAGGVDRLYPSGHAEL FARMRRDGAVVSELPCGASPTRWRFLLRNRLIAAASAATVVVEAGARSGSLNTANHAI ALERPLGAVPGPVTSASSSGCHRLLRESQAVCITSADDVMDLVPGWSGAGTQVQEPGS AHASSRDTPSGAADDRVGARAAEDRGDSRVVRVLDALAVRRGRGTADVAARAGLGVAE TSSVLGMLELEGTVARPDGGWVRRPGSR" misc_feature 815582..816214 /gene="smf" /locus_tag="CMS_0767" /old_locus_tag="CMS0767" /inference="protein motif:HMMPfam:PF02481" /note="HMMPfam hit to PF02481, SMF protein, score 2.6e-79" gene 816767..817714 /gene="xerC" /locus_tag="CMS_0768" /old_locus_tag="CMS0768" /db_xref="GeneID:6158992" CDS 816767..817714 /gene="xerC" /locus_tag="CMS_0768" /old_locus_tag="CMS0768" /codon_start=1 /transl_table=11 /product="tyrosine recombinase XerC" /protein_id="YP_001709531.1" /db_xref="GI:170781199" /db_xref="GeneID:6158992" /translation="MVDHGQPQRGAPAATPLEADISEFATSMDRERGSAAHTVRAYSA DLRDLAAHAARQGVTTSAGLDLDVLRDWLWRGSQARLAPATLARRSAAVRGFGAWLLR TGRVDADPAVRLKAPRAGSHLPRVLAREQMSALLADLAAQAADDDPAALRDLAAIELL YASALRVSELTGLDLGDVDASRLTVRVVGKGDRERVVPFGVPAAEALDAYVTRGRPAL VTPRTGTALFLGARGGRLGSRAVYGLVASLLADIPGSGPQGPHALRHTAATHLLDGGA DLRTVQEMLGHASLGTTQIYTHVSIERLRRSYEGAHPRA" misc_feature 816827..817081 /gene="xerC" /locus_tag="CMS_0768" /old_locus_tag="CMS0768" /inference="protein motif:HMMPfam:PF02899" /note="HMMPfam hit to PF02899, Phage integrase, N-terminal SAM-like, score 6.3e-11" misc_feature 817145..817684 /gene="xerC" /locus_tag="CMS_0768" /old_locus_tag="CMS0768" /inference="protein motif:HMMPfam:PF00589" /note="HMMPfam hit to PF00589, Phage integrase, score 6.8e-47" gene complement(817794..818357) /locus_tag="CMS_0769" /old_locus_tag="CMS0769" /db_xref="GeneID:6159098" CDS complement(817794..818357) /locus_tag="CMS_0769" /old_locus_tag="CMS0769" /codon_start=1 /transl_table=11 /product="M23B family metallopeptidase" /protein_id="YP_001709532.1" /db_xref="GI:170781200" /db_xref="GeneID:6159098" /translation="MRGRGGQRTAAGVALAVGVTVGLLFGVATPGVPERASADASSAS ASVPATPRWRWPVDPPHTVTRPFQAPTTTYGPGHRGIDIAVDPGAEVRAPADGTVSFA GVVVDRPVVSIRHADGLVSSVEPVVPLVAAGDSVVAGQVIGTLAESPRHERDGGLHLG ARLHGEYVDPALLLAALQHAVLLPLDP" misc_feature complement(817941..817973) /locus_tag="CMS_0769" /old_locus_tag="CMS0769" /note="PS01098 Lipolytic enzymes G-D-S-L family, serine active site." gene 818457..819926 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /db_xref="GeneID:6156694" CDS 818457..819926 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /codon_start=1 /transl_table=11 /product="putative sugar transporter" /protein_id="YP_001709533.1" /db_xref="GI:170781201" /db_xref="GeneID:6156694" /translation="MAEWSPVNETTTPRDDKKLQRRAIGLAVSAAVGGFLFGFDSSVI NGAVSAIQGRFQLSETLIGFAVASALLGCALGAYLAGRIADRIGRRWTMIIGAGFFFI SAFGSGYAFSVWDLTIWRIVGGLGIASVVAPAYIAEISPKLLRGRLASLQQLAITLGI FTALLSDAVFAGAAGGASEDFWLGLEAWRWMLLVCAIPAVIYGFLAYRLPESPRFLVE KGRKDEAQAILASVWKQEDIDRASRDLERQIEEDRVAKRTGTLRGSKLGLQGIVWIGI ILSVFQQFVGINVIFYYSTTLWQAVGFDESQSLTTSVITAVTNVAVTFIAIALVDRIG RRPILLSGSLAMAVSLAVMAICFSQSSTVDGEVALPQPFGVIAIIAANVFVIGFGASW GPLVWVLLGEIFPNRIRAKALGVAAMAQWIANFAITVSFPALSAFSLPFTYGMYAAFA ALSFVFVLMKIPETNGMSLEEAETLFVDKPKKRKAAARS" misc_feature order(818523..818591,818634..818693,818727..818795, 818805..818873,818919..818987,819015..819083, 819267..819335,819378..819446,819465..819527, 819585..819653,819690..819758,819771..819830) /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /note="12 probable transmembrane helices predicted for CMS0770 by TMHMM2.0 at aa 23-45, 60-79, 91-113, 117-139,155-177, 187-209, 271-293, 308-330, 337-357, 377-399,412-434 and 439-458" misc_feature 818532..819884 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.3e-133" misc_feature 818544..819764 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 818694..818747 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /note="PS00216 Sugar transport proteins signature 1." misc_feature 819432..819485 /locus_tag="CMS_0770" /old_locus_tag="CMS0770" /note="PS00216 Sugar transport proteins signature 1." gene 820165..821127 /gene="rpsB" /locus_tag="CMS_0771" /old_locus_tag="CMS0771" /db_xref="GeneID:6156695" CDS 820165..821127 /gene="rpsB" /locus_tag="CMS_0771" /old_locus_tag="CMS0771" /note="one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2" /protein_id="YP_001709534.1" /db_xref="GI:170781202" /db_xref="GeneID:6156695" /translation="MAVVTIRQLLDCGVHFGHPKTRWNPKMKRFIFTERSGIYIIDLQ QSLALIDKAYDFVKETVAHGGTILFVGTKKQAQESIAEQAQRVGQPYVNQRWLGGLLT NFQTVHKRLNRLKELDLVDFDDTTRGFTKKELLIQRRERDKLEKSLGGIRNLTKTPSA MWVVDTKKEHLAIDEARKLGIPVIGILDTNCDPDEVQYPIPGNDDAIRSVALLTRIIA DAAAEGLIQRHQKPDAEGSAPAEPLADWERELLEQGDAAKAALPVEENDVDAEVSAKN EAKSDDEVPAPVHAPESDDATEAKIEAEATEAEAAPATTGPVSE" misc_feature 820180..820215 /gene="rpsB" /locus_tag="CMS_0771" /old_locus_tag="CMS0771" /note="PS00962 Ribosomal protein S2 signature 1." misc_feature 820189..820839 /gene="rpsB" /locus_tag="CMS_0771" /old_locus_tag="CMS0771" /inference="protein motif:HMMPfam:PF00318" /note="HMMPfam hit to PF00318, Ribosomal protein S2, score 1.6e-80" gene 821238..822065 /gene="tsf" /locus_tag="CMS_0772" /old_locus_tag="CMS0772" /db_xref="GeneID:6158965" CDS 821238..822065 /gene="tsf" /locus_tag="CMS_0772" /old_locus_tag="CMS0772" /note="EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu" /codon_start=1 /transl_table=11 /product="elongation factor Ts" /protein_id="YP_001709535.1" /db_xref="GI:170781203" /db_xref="GeneID:6158965" /translation="MANFTAADVKELRDRLGAGMMDSKNALVEADGDIEKAIEILRLK GQKGNAKRGDRSTAEGLVAASEQDGAATLIELACETDFVAKNDKFIALSESVLAAVVA AGASTVEEALQAPAGEQTVDQLISDRAAILGEKIALRRVARLAGEHQEIYLHRTSKDL PPQVGVVVDYSGTDAETARSIAQHIAFANPEYLAREDVPADKVEAERAIVTEISRNEG KPEAALPKIIEGRLTGFFKQVALLEQDYAKDNKQSVKKVVEAAGLTVTGFARFKVGA" misc_feature 821247..821369 /gene="tsf" /locus_tag="CMS_0772" /old_locus_tag="CMS0772" /inference="protein motif:HMMPfam:PF00627" /note="HMMPfam hit to PF00627, Ubiquitin-associated, score 1.2e-08" misc_feature 821406..822062 /gene="tsf" /locus_tag="CMS_0772" /old_locus_tag="CMS0772" /inference="protein motif:HMMPfam:PF00889" /note="HMMPfam hit to PF00889, Elongation factor Ts, score 1.6e-74" gene 822225..822941 /gene="pyrH" /locus_tag="CMS_0773" /old_locus_tag="CMS0773" /db_xref="GeneID:6159081" CDS 822225..822941 /gene="pyrH" /locus_tag="CMS_0773" /old_locus_tag="CMS0773" /EC_number="2.7.4.-" /note="Catalyzes the phosphorylation of UMP to UDP" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="YP_001709536.1" /db_xref="GI:170781204" /db_xref="GeneID:6159081" /translation="MTDQTTTRRVLLKLSGESFGGGQMGVDPDVVSALAREIAEAAKT VEVAIVVGGGNFFRGAQLSQRGMDRGRADYMGMLGTVMNALALQDFLEQAGAATRVQS AISMTQVAEPYIPRRAVRHLEKGRIVIFGAGAGLPYFSTDTVAAQRALEISATEVLVA KNGVDGVYTGDPRTDSTATLLDTVTYQDALQRGLKVVDSTAFSLCMDNDMKMVVFGME PGGNVTRAIRGERIGTIVSN" misc_feature 822246..822872 /gene="pyrH" /locus_tag="CMS_0773" /old_locus_tag="CMS0773" /inference="protein motif:HMMPfam:PF00696" /note="HMMPfam hit to PF00696,Aspartate/glutamate/uridylate kinase, score 1.3e-59" gene 823055..823612 /gene="frr" /locus_tag="CMS_0774" /old_locus_tag="CMS0774" /db_xref="GeneID:6158913" CDS 823055..823612 /gene="frr" /locus_tag="CMS_0774" /old_locus_tag="CMS0774" /note="Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="YP_001709537.1" /db_xref="GI:170781205" /db_xref="GeneID:6158913" /translation="MTVAEVLADARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVE YYGSPTPLGQLASMNNPEARTLIVTPYDKTALKEIEKALVNVPNLSATVGNDGEMVRF TLPELTEDRRKEFVKIVRGKAEEGRVSVRNIRRRSKDELDALKGEVGDDEVARVEKEL EALTKTHTDQVDDALKRKETELLEV" misc_feature 823112..823603 /gene="frr" /locus_tag="CMS_0774" /old_locus_tag="CMS0774" /inference="protein motif:HMMPfam:PF01765" /note="HMMPfam hit to PF01765, Ribosome recycling factor,score 2.1e-62" gene 823736..824653 /gene="cdsA" /locus_tag="CMS_0775" /old_locus_tag="CMS0775" /db_xref="GeneID:6158693" CDS 823736..824653 /gene="cdsA" /locus_tag="CMS_0775" /old_locus_tag="CMS0775" /EC_number="2.7.7.41" /codon_start=1 /transl_table=11 /product="putative phosphatidate cytidylyltransferase" /protein_id="YP_001709538.1" /db_xref="GI:170781206" /db_xref="GeneID:6158693" /translation="MQATRADLTAQVRATRASIEATNARINARTGRNLLFAVSVGLLL GGVVLASLVVEKQLFLLIGIALVAFTAYELATALRQAGRRVPRVGSVIAVVALVPITY YGRPDGQWLGLVGAMAFVALWRVVEQAVPARRTSARAVVGDIGSSVFLLAYVGLLGSF AVLLTAGDGGEWWTLAFLILVVCCDTGAYVAGLNFGKHPMAPTISPKKTWEGFAGAVV AAVLAGILLSLFMIQQEWWFGVVLGLVIVVTATLGDLAESLIKRDLGVKDISSWLPGH GGFLDRLDSVLPSAAVAYALFLIVTGASS" misc_feature order(823829..823897,823910..823969,823988..824047, 824060..824113,824150..824218,824246..824314, 824372..824431,824444..824512) /gene="cdsA" /locus_tag="CMS_0775" /old_locus_tag="CMS0775" /note="8 probable transmembrane helices predicted for CMS0775 by TMHMM2.0 at aa 73-95, 100-119, 126-145,150-167, 180-202, 212-234, 254-273 and 278-300" misc_feature 823838..824635 /gene="cdsA" /locus_tag="CMS_0775" /old_locus_tag="CMS0775" /inference="protein motif:HMMPfam:PF01148" /note="HMMPfam hit to PF01148, Phosphatidate cytidylyltransferase, score 1.9e-67" gene 824655..825209 /locus_tag="CMS_0776" /old_locus_tag="CMS0776" /db_xref="GeneID:6158630" CDS 824655..825209 /locus_tag="CMS_0776" /old_locus_tag="CMS0776" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709539.1" /db_xref="GI:170781207" /db_xref="GeneID:6158630" /translation="MSRMTTTFPSAGRRERGYDPDQVNAFLRDARRCYDDEADRSLTS ETIRRVSFDMRRGGYSAAAVDRVLERLEDAFAVRERDRTIARVGADAWNAEARRAAQE ILDRVSRPTGERFDRAGFLTTGYDRREVDRFADRIAKYFRGTKPMSVDDVRTVAFHPR RGGYREAQVDLLLDAVIDVMNAVR" gene 825402..826028 /locus_tag="CMS_0777" /old_locus_tag="CMS0777" /db_xref="GeneID:6156696" CDS 825402..826028 /locus_tag="CMS_0777" /old_locus_tag="CMS0777" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709540.1" /db_xref="GI:170781208" /db_xref="GeneID:6156696" /translation="MAAPTIAFGAAAAFMLVNVVDPTSGAVANPQYQEYQATVAQLAR ADAQTLAVPSADTAVEIEPGFESVAAPPPPPPVETPAPSTGSGVGSGSGAKSSGSAGG GAIAIPDPGSAKGIARSILASQGMGDDQYACLDYLWTKESGWRVSAYNPSGAYGIPQA LPGSKMASAGADWQTNPATQITWGLGYIDSRYGSPCGAKAHSVLKNWY" sig_peptide 825402..825479 /locus_tag="CMS_0777" /old_locus_tag="CMS0777" /note="Signal peptide predicted for CMS0777 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.773 between residues 26 and 27" gene 826097..827827 /locus_tag="CMS_0778" /old_locus_tag="CMS0778" /db_xref="GeneID:6156697" CDS 826097..827827 /locus_tag="CMS_0778" /old_locus_tag="CMS0778" /codon_start=1 /transl_table=11 /product="putative Na+/H+ antiporter" /protein_id="YP_001709541.1" /db_xref="GI:170781209" /db_xref="GeneID:6156697" /translation="MDYAALGVVGIAILVAVTLVARRIGVATPLVLVLVGVGISYLPG VPPVEVPPELILAGVLPPLLYGAAVTVPLVDFRRNLRTIVSLSVVLVLVSAFGIGLLL YALFPDLSFASALALGAVVSPPDAVAATSIARRLGLPPRLVTVLEGEGLVNDATALVL LRTSIAAVGASVDLWQAAGGFVLSAVGALAIGIAVGIITTEVRRRLDDPVLDTAISFA VPFVAFIPAEEVGASGVLAVVAAGIWSGHRSASTLSAQSRINERLNWRTVLFLLENGV FLVMGLELRDILDEVQEADLGVGRAVAYGVLTLVVLTLIRFGFLVPLLLGLRRHEEHV AARTRRVRRGLERLRRERGDDRPSRRERAATRILRRRRADLQALRSHGLGWRGGLVLG WAGMRGVVTLAAAQSLPSGTPYRAQLVLIAFTVAIVSLLVNGGTLPAVIRLSGIRGSD AVEDQRQLAGLVSELAEAGIRAVDEGVRQLPEGTLVDDDVVERVRRDTALKAEWVTER ADAMAADDDAPLSPRAAYLLLRRHVLDAERAALLEARGTGEHPSRVLARAQRMLDQEE ARLGRQADAG" misc_feature 826106..827425 /locus_tag="CMS_0778" /old_locus_tag="CMS0778" /inference="protein motif:HMMPfam:PF00999" /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger,score 4.3e-65" misc_feature order(826106..826159,826172..826228,826256..826324, 826343..826411,826622..826690,826883..826951, 827009..827077,827240..827308,827351..827419) /locus_tag="CMS_0778" /old_locus_tag="CMS0778" /note="9 probable transmembrane helices predicted for CMS0778 by TMHMM2.0 at aa 4-21, 26-44, 54-76, 83-105,176-198, 263-285, 305-327, 382-404 and 419-441" gene 827863..828159 /locus_tag="CMS_0779" /old_locus_tag="CMS0779" /db_xref="GeneID:6156698" CDS 827863..828159 /locus_tag="CMS_0779" /old_locus_tag="CMS0779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709542.1" /db_xref="GI:170781210" /db_xref="GeneID:6156698" /translation="MPRSNRPRGRRAREEEDEDVLTRLLSGSQHTETRRGRVWNVQPV SAARALKLYRCPGCTLDIEPGHAHVVAWRADGMMGEQSDLAARRHWHTHCWKVS" gene 828156..828890 /locus_tag="CMS_0780" /old_locus_tag="CMS0780" /db_xref="GeneID:6156699" CDS 828156..828890 /locus_tag="CMS_0780" /old_locus_tag="CMS0780" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709543.1" /db_xref="GI:170781211" /db_xref="GeneID:6156699" /translation="MTDTAPRPITSSTELPARREDVELVTADGLRLVGELALPADRDP VATLVTLHPLPTAGGFMDSHVLRKAALRLPAMAGLAVLRFNTRGTTSARGTSEGAFDG GDAERLDLAAAMDLVAARGLPAPWIVGWSFGTEIALKHGREHPVEGAILLSPPLHRAS ADEVAAWHGDPRRLVILVPEHDDFLRPAEARERFASVPEAELIAVDGAKHLWVGESQV SRVLTEIVRTVAPEALPLPTEWPAAR" gene complement(828906..829964) /locus_tag="CMS_0781" /old_locus_tag="CMS0781" /db_xref="GeneID:6156700" CDS complement(828906..829964) /locus_tag="CMS_0781" /old_locus_tag="CMS0781" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709544.1" /db_xref="GI:170781212" /db_xref="GeneID:6156700" /translation="MKIQNPYRLGLLAGLGVLTALVIGGALVSLGTVLTYVGTAIFLA LGIDPLVTFLERKGVPRPVAILVIFLALLGSLAGVLLAVIPVVVNQASALVTQIVQYA QSVSGDQFIENLQSFVPREVFDVQTGADQLVQYLSNASNVATITGNVLTVAFTIGNFL FGLVIVVILTMYFTASLNSFKSGLYKLVPATRRARFADIAEQITQSVGRYVMGQVGLA LCNGVLSFVYLSIVGAALPAVWAFIAFLFSLLPLVGTITGSALIVLGQIVLLPESMNT WIAVAVYYLVYMQIEAYVLSPNIMNRAVKVPGVVVVIAALTGGTLLGVLGALIAVPVA AAVLLIIRQVAVPLQNER" sig_peptide complement(828906..828998) /locus_tag="CMS_0781" /old_locus_tag="CMS0781" /note="Signal peptide predicted for CMS0781 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.324 between residues 31 and 32" misc_feature complement(828930..829928) /locus_tag="CMS_0781" /old_locus_tag="CMS0781" /inference="protein motif:HMMPfam:PF01594" /note="HMMPfam hit to PF01594, Protein of unknown function UPF0118, score 6.1e-46" misc_feature complement(order(828942..829037,829080..829139, 829173..829241,829254..829322,829446..829514, 829701..829769,829803..829871,829881..829940)) /locus_tag="CMS_0781" /old_locus_tag="CMS0781" /note="8 probable transmembrane helices predicted for CMS0781 by TMHMM2.0 at aa 9-28, 32-54, 66-88, 151-173,215-237, 242-264, 276-295 and 310-341" gene complement(829991..831766) /locus_tag="CMS_0782" /old_locus_tag="CMS0782" /db_xref="GeneID:6156701" CDS complement(829991..831766) /locus_tag="CMS_0782" /old_locus_tag="CMS0782" /note="Contains extensive coiled-coil regions" /codon_start=1 /transl_table=11 /product="putative low complexity hydrophilic protein" /protein_id="YP_001709545.1" /db_xref="GI:170781213" /db_xref="GeneID:6156701" /translation="MPHDDTPFSPAMRGYNRDEVDRAVADLRRELIRSNQQGAELRAE ADRLRRSEQELRDELEEVGSPTFAGLGSRLEATLRVAEEQSTRLVAQADVDAARLRRA TQEETDAQRAEAEATARHLVDSARAQAAQILDAARREADDLHERADDRAEGLRSDAER EAAALLLRTRTEVADLRSTAERETDAQRAEAAREVAELRARVDRETDEARRDAADLAR ETVLARGALERELADARARHDETVAEERADLDRDARETEERLRLDEETRRIALAQLEE QTRADLDREIEQARTDWDRELQASRDDFDRRIHAERTAFDRDVEETRAALEREIAETR EALELEVASARADLARDVDEARTDLARDIAQGTERLERETRATREQLELEAVTARAAL EREIAQAEALEADRREAERLRLEREAAEARREIQAEADEARLMLSREIEQGHLDLDAE ITARRDHDARDAAERQREAAERTAEYLGEAEARLQEVTALLSSTREEAETLAKESRDA ARTVRDDADHDARAAIADAERRARATVADAERRARETVADAEERLDRIRIEREAVAAY LENVRGVLTQADDASSDDDESRTAR" gene 832052..833896 /locus_tag="CMS_0783" /old_locus_tag="CMS0783" /db_xref="GeneID:6156702" CDS 832052..833896 /locus_tag="CMS_0783" /old_locus_tag="CMS0783" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709546.1" /db_xref="GI:170781214" /db_xref="GeneID:6156702" /translation="MRFVLAIATFVVAALMIGLGIAQHTFLAGPDRITAATSSADGAA YTVVDGKTLNAHPGLQDTVVRGDGEVFAAYGPTSDVEAWVGSSPYTRIAMDDEGALTS QVVEPEATTPSPTAGSSGTDASGTAAATPTVTDPRGSDLWLSEQTGQGEVSLSTRLPD DVSLILATDGQAAAPADVELSWPSEGESPWVVPLVIGGIVLLVVGLVLYLLALRHLRR SRGPRRNLPPRGGPRIPRIGPAARRAALTAGTGAAPVAPRGRGRRSRIALPVLVVTGL ALSGCTAQGAPADLAAGVGSTATPTPTSSLDAAREAEDADPPVVTQDQAERIVSRVSE VATAADQSLDAATLAPRFAGPALQERTSDYQVRKAKPDIAAVPAIPAGDLQLTLPQAT LTWPRTVAAVVKDPDTEDAPTLSLTLVQDSPRENYRVLYAMPISTTAALPDVAPAAIG AARLAADVKLLAVQPDQLSAAYADVLNKGDASQYADLFDPADDGVRAQDAKRKVDFTA SIGETGSVEFTAAADSATPVAMSTVESGALVSVTVQLGIVAKPTAEGAKINANPEVQA ITGLTDSAKGFDTVRTAQMLMYVPPVNSGEKIRLYASSTHITSAKELP" sig_peptide 832052..832156 /locus_tag="CMS_0783" /old_locus_tag="CMS0783" /note="Signal peptide predicted for CMS0783 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.511 between residues 35 and 36" misc_feature order(832064..832132,832622..832690,832847..832915) /locus_tag="CMS_0783" /old_locus_tag="CMS0783" /note="3 probable transmembrane helices predicted for CMS0783 by TMHMM2.0 at aa 5-27, 191-213 and 266-288" gene 834076..834888 /locus_tag="CMS_0784" /old_locus_tag="CMS0784" /db_xref="GeneID:6156703" CDS 834076..834888 /locus_tag="CMS_0784" /old_locus_tag="CMS0784" /codon_start=1 /transl_table=11 /product="putative thioredoxin" /protein_id="YP_001709547.1" /db_xref="GI:170781215" /db_xref="GeneID:6156703" /translation="MLAADDASFTQFLDISSVVPVIVELVSTGLASSRELSPVLERVV TEQGGRVLLVRIDVDQSPQLGQAFQAQTVPTVAALIGGRPVGLFAGVIPEDQVRDVIQ QVLELAQQNGVTGQAVAPDATAAPAAPVEEPLPPHHAEAYAFIEQGDYASAAAEYRTA IAQNPRDALAVAGLAQVSLLERLDGKAADEIRAGAASGPDDVDAQLLVADLDLSGGHV EDAFTRLLELFPSADAAGRDAIRQRLLEHFEVVGLEDPRVGVARRQLTRLLY" gene complement(834964..837540) /locus_tag="CMS_0785" /old_locus_tag="CMS0785" /db_xref="GeneID:6156704" CDS complement(834964..837540) /locus_tag="CMS_0785" /old_locus_tag="CMS0785" /note="catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain" /codon_start=1 /transl_table=11 /product="glycogen branching enzyme" /protein_id="YP_001709548.1" /db_xref="GI:170781216" /db_xref="GeneID:6156704" /translation="MTDMTDTTPQQDPRDPRDELPGADVVVPPAADADIEQGADVSVP PADDSAAEEAPASADPVRLPEVADHDLRAVAEGVHSGPHSVLGQHPVAIDGVSDDLVV VRALRPLAEAVSVILSTGARVALAHVGHGVWQGAHVLGLQDYQVEARYSDGGTWTAED PYRFLPTVGDLDLYLFGEGRHERLWDVLGAHHREHWGVAQTYVGVSFSVWAPHARAVR VIGSFNGWDGVQHAMRRLDGNGVWELFVPGVEPGVSYKFEILTQAGEWIEKADPMARM TEVPPATASRVETSDYQWDDDAWLEERAARDPHDSPMSVYEMHLGSWRPGLGYREVAG ELVAYLQELRYTHVEFLPLAEHPFGGSWGYQVSGYYAPTSRFGSPDDLKHLIDSLHRA GIGVIVDWVPAHFPKDAFALAQFDGQPLYEHTDPRRGEQQDWGTLVFDFGHSQVRDFL VANALYWFEEFHIDGLRVDAVASMLYLDYSREEGQWLPNVHGGRENLEAISFLQEVNA TAYRTHPGIVMIAEESTSFPGVTRPTSDGGLGFGLKWNMGWMHDTLDYAAEDPMYRSY HHGQITFSMVYAYTENFLLPISHDEVVHGKGSLVGKMPGDHWQKLANVRAYLSFMWSH PGKQLLFMGQEFGQVSEWSEERGLDWWILDQPLHRALFDLVGSLNRTYVDTPALWALD NDPAGFEWIDAGDAGRNVLAFLRRDREGNQVAVVHNFSGAPISGYRLGLPQAGVWEEI LNTDAEQFGGSGVGNLGAVHAGEEGWHGRPASAELTLPPLAGLWLRLKQDPADLRPVE APAQAAPDADETRADGTPFAEATAAPVLPQSPDAQPPVEGLSATDDAPGSDDGAPRVP TV" misc_feature complement(835552..836592) /locus_tag="CMS_0785" /old_locus_tag="CMS0785" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 2.6e-08" misc_feature complement(836719..836982) /locus_tag="CMS_0785" /old_locus_tag="CMS0785" /inference="protein motif:HMMPfam:PF02922" /note="HMMPfam hit to PF02922, Glycoside hydrolase, family 13, N-terminal, score 3.3e-27" gene complement(837537..840179) /locus_tag="CMS_0786" /old_locus_tag="CMS0786" /db_xref="GeneID:6156705" CDS complement(837537..840179) /locus_tag="CMS_0786" /old_locus_tag="CMS0786" /note="May have later translational start site but not one which aligns with homologs." /codon_start=1 /transl_table=11 /product="putative alpha-amylase" /protein_id="YP_001709549.1" /db_xref="GI:170781217" /db_xref="GeneID:6156705" /translation="MGAAPAAHPPTRRTRTGTAGTVTRGERASARRPPPPRRATGGRR TGYGRTVTTPQDGPDPLPRPVRGRAARKAAKAQKLQDAQKPPEPRIPLIPEAPAQAAQ PPVPAAPEPQAPVPPAEPVVPAEPVTPATPVAPPAPAPAEPEPAAAAAAEPPPSAPAP EPASTPEPVTPSAPRHAAPVAEPTPGAERDLPIEPTPSAEPAQTADPATDDYVPVIGR IPILSLTPQIEDDLWPAKSFVHDVVPFGATIFREGHDLIGADVLLTDPTGAETSHRMS LDATKPGLDRWITSAQLETQGVWTWRVSAWSDDFGTWLHNAEIKVPAGLDVDVMLALG AEALERAAADGTRDAADRDVLRAALAGISDADAAPDARLAAATTPEVLAAIDRVPLRS LVTLSPERTIVVERERAAVGSWYEFFPRSEGAVEHEDGSWTSGTFATAARRLPAIRDM GFDVVYIPPVHPIGRTNRKGPNNTLTAGPHDPGSPYGIGSEDGGHDSIHPELGTADDF REFVRAVADHGMELAIDIALQASPDHPWVTTHPELFTTLPDGSIAFAENPPKKYQDIY PLNFDNDPEGSYREMLRVMRVWLGLGVKIFRVDNPHTKPLVFWERLIHQVMRDEPDAI FLSEAFTRPAMMRTLAKIGFQQSYTYFTWRNTKQELEEYLTEVSHETSDYLRPNFFAN THDILTPYLQFGGRAAYRIRAAIAATASPSWGIYSGYELIENVARPGAEENIDNEKYE YKPRDWARQEELGGSIAPEITRLNEIRRQHPALRQLRNLDVHWSDDDSILVYSKHLAA EHTGTGEADTILVVANVDPHSARETQVHLDPTRWGLAEDAVFEVEDLLTGDVYTWSTS NFVRLDAFTHPVHVLRVTPTASKG" misc_feature complement(837936..838934) /locus_tag="CMS_0786" /old_locus_tag="CMS0786" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 5.2e-05" misc_feature complement(839169..839210) /locus_tag="CMS_0786" /old_locus_tag="CMS0786" /note="PS01039 Bacterial extracellular solute-binding proteins, family 3 signature." gene 840288..841250 /locus_tag="CMS_0787" /old_locus_tag="CMS0787" /db_xref="GeneID:6156706" CDS 840288..841250 /locus_tag="CMS_0787" /old_locus_tag="CMS0787" /note="Nu/R/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709550.1" /db_xref="GI:170781218" /db_xref="GeneID:6156706" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 840696..841238 /locus_tag="CMS_0787" /old_locus_tag="CMS0787" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.1e-37" gene complement(841388..842047) /locus_tag="CMS_0789" /old_locus_tag="CMS0789" /db_xref="GeneID:6156707" CDS complement(841388..842047) /locus_tag="CMS_0789" /old_locus_tag="CMS0789" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709551.1" /db_xref="GI:170781219" /db_xref="GeneID:6156707" /translation="MSSPVTLTARALLLDMDGTLVDSTALVEEIWTMLAHRFGHDPAE LIRGIHGVRAADSIARYAPEGTDVPSLLAELDRLELDGSPATVEIPGARDLVAALPAG SHALVTSAGRELARARLTGAGIRVPDLLVTAEDVENGKPHPDGYLLAASRLGVDPADA IVYEDAEAGIRAGLAAGMRVVIVGDHESDTTVDLPRVRDHRGTTVEVRDGILTLTLPG T" misc_feature complement(841490..842023) /locus_tag="CMS_0789" /old_locus_tag="CMS0789" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 2.4e-27" gene 842161..843345 /locus_tag="CMS_0790" /old_locus_tag="CMS0790" /db_xref="GeneID:6156708" CDS 842161..843345 /locus_tag="CMS_0790" /old_locus_tag="CMS0790" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709552.1" /db_xref="GI:170781220" /db_xref="GeneID:6156708" /translation="MLHGVGMPAPIRILFSFARGRGHLGPLMPLARAAQARGHATDLT GTRVVVLAQTGFARLHPDATGEGRDDEGTGILARPDPHRAYPRMAQVFLGASADAAAE RVGRIIAERRPHVVVCDEHDFGAMVAAERAGVPRVAVEVLATGYAGWRPDLRDGLGRL RAAAGLAPDPALAMLDGDLVVVPFPASLRGPEAVPRPVLRVRPEPPETAAAHPAAAWL AAGDEPHRAYVTLGTEFNVRSGDLLPRIAVGLATLPVRTLVTVGPGVDPASLGSTLRL RVERHVPQGAVLGLADAVVCHGGSGTLTGALAQGVPVAVLPMGADQVLNGRAAERIGA GRMLDAATATPAGIAAAVAALLSDPAVARSAADVRREIEALPPVERALDAIEALAAGR SA" gene 843440..843676 /locus_tag="CMS_0791" /old_locus_tag="CMS0791" /db_xref="GeneID:6156709" CDS 843440..843676 /locus_tag="CMS_0791" /old_locus_tag="CMS0791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709553.1" /db_xref="GI:170781221" /db_xref="GeneID:6156709" /translation="MRDDDAEAARIRTLAGIAAFTLMLGLLIVGLLPDLSTLGGRAGG TPAWFGACLFALLGLAGLGWAAFRAIRLRRRTRA" misc_feature order(843476..843544,843572..843640) /locus_tag="CMS_0791" /old_locus_tag="CMS0791" /note="2 probable transmembrane helices predicted for CMS0791 by TMHMM2.0 at aa 13-35 and 45-67" gene 843669..843863 /locus_tag="CMS_0792" /old_locus_tag="CMS0792" /db_xref="GeneID:6156710" CDS 843669..843863 /locus_tag="CMS_0792" /old_locus_tag="CMS0792" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709554.1" /db_xref="GI:170781222" /db_xref="GeneID:6156710" /translation="MPDLLEKALQVVTIVCLIGMGVSSFRALNHTSRTNEPAPRSMYL AALPFAVVGLLAIIAGFAFD" misc_feature order(843696..843752,843789..843857) /locus_tag="CMS_0792" /old_locus_tag="CMS0792" /note="2 probable transmembrane helices predicted for CMS0792 by TMHMM2.0 at aa 10-28 and 41-63" gene 844096..845256 /locus_tag="CMS_0793" /old_locus_tag="CMS0793" /db_xref="GeneID:6156711" CDS 844096..845256 /locus_tag="CMS_0793" /old_locus_tag="CMS0793" /codon_start=1 /transl_table=11 /product="putative oxidase" /protein_id="YP_001709555.1" /db_xref="GI:170781223" /db_xref="GeneID:6156711" /translation="MAGSTGRGRASHHVVIGAGLAGAATAWQLASRGHEVTVLERDRP AGMLGSSHGSARILRYAYDDPFYVRLVRDARVLWDRLERTTGARLVTPTGSVDSGLVR RPAELARVLERVGIEHELMGAREAEDRWPEMSFDSDVLFHPAAGVVDAETAVRTMLDL AVAQGAVVHEGWEAVSVARVGAGFAVTSDDGRRVEGDSVVVGGGAWLPELLGGALPLP RAALDRIPPLRVRQEQVFHFPYRRSAYMDGPRARPVPTSIHMDERMQVYALPGGRDAD HRGHKVAEFDGGRVIPSAAHQDGVVDPANRARVVDWVRRNLPGVEPVPYAEATCLFTS TPSEDFVIDRVDGITIVSPCSGHGAKFAPLIGSLTADAATGERVEPRFALAP" misc_feature 844129..845211 /locus_tag="CMS_0793" /old_locus_tag="CMS0793" /inference="protein motif:HMMPfam:PF01266" /note="HMMPfam hit to PF01266, FAD dependent oxidoreductase, score 2.4e-45" gene complement(845269..845973) /locus_tag="CMS_0794" /old_locus_tag="CMS0794" /db_xref="GeneID:6156712" CDS complement(845269..845973) /locus_tag="CMS_0794" /old_locus_tag="CMS0794" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709556.1" /db_xref="GI:170781224" /db_xref="GeneID:6156712" /translation="MERADREDVMPRPRIRPEKSSKPGAPPPSVAARVAADPAQKEVL VEEALLLVGVALRIQMVNLIIMRTLRERRPYDEESLIEALRGELAELIGEKRGEAERL RMARDRAALRDGKGRRPDDYREGDVPGLRLRAEIAEEIVERLGALSRDPEALREVLVI ARDSALEQIVRARLSPQLLPGAFPEEGRDERVSGLREELARLAADRERSAERTETRDP GRTRVRTGGRGRAQKV" misc_feature complement(845779..845847) /locus_tag="CMS_0794" /old_locus_tag="CMS0794" /note="1 probable transmembrane helix predicted for CMS0794 by TMHMM2.0 at aa 10-32" gene complement(846081..847124) /locus_tag="CMS_0795" /old_locus_tag="CMS0795" /db_xref="GeneID:6156713" CDS complement(846081..847124) /locus_tag="CMS_0795" /old_locus_tag="CMS0795" /codon_start=1 /transl_table=11 /product="putative esterase" /protein_id="YP_001709557.1" /db_xref="GI:170781225" /db_xref="GeneID:6156713" /translation="MMIEATRPTCTRTPPTHPPAHRRTPGGSMLIEPVDAARAHVSSH VDPEDFDAFWADTLAEAAQHDLDVRLAPVQTDLALVDVQDVTFAGSGGTDVRAWLRTP RGATGPLPTVVSYVGYGGGRGRAEETLIYAAAGFAHLQMDTRGQGSYWSAGDTADHGE AGPAIPGFMTRGIASRETYYYRRLFTDAVRAVDVARSLDVVDPARIAVQGGSQGGGMA LAVAGLRDDLAAVSAYVPFLSDIERATHITDAYPYHEVVDYLKTHRGRGEDVHAVLRH FDGVAFSRRATAPARFSVGLMDATCPPSTVYGAFNAYAGEKEIVEWEYNGHDGGGIDD ELGTLAFLKRRMG" misc_feature complement(846090..847040) /locus_tag="CMS_0795" /old_locus_tag="CMS0795" /inference="protein motif:HMMPfam:PF05448" /note="HMMPfam hit to PF05448, Acetyl xylan esterase,score 8.4e-126" gene complement(847191..847910) /locus_tag="CMS_0796" /old_locus_tag="CMS0796" /db_xref="GeneID:6156714" CDS complement(847191..847910) /locus_tag="CMS_0796" /old_locus_tag="CMS0796" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709558.1" /db_xref="GI:170781226" /db_xref="GeneID:6156714" /translation="MSAGTGAGTTAGTATSASAGTTATAGTTGAARRGGKREKPEVRR AMIVEAARAVILRQGLTATGLRDIAAEGDVSVGTVTYHFASVAEILDEVVVLETDRFY ASIVEEVDADPDPVHAIRLLVEPLFTGTVEAEAHWRLWSDYWTTVARQPGLTADRLER IRVWEACLVRTIRRGVERGVFRTVDAPEVALKLAAYSDGIATQLSQKVPGLDNTRARE WIWTFLDAELVDPADGTPLFR" sig_peptide complement(847191..847265) /locus_tag="CMS_0796" /old_locus_tag="CMS0796" /note="Signal peptide predicted for CMS0796 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.739 between residues 25 and 26" misc_feature complement(847632..847772) /locus_tag="CMS_0796" /old_locus_tag="CMS0796" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 1.6e-12" misc_feature complement(847659..847724) /locus_tag="CMS_0796" /old_locus_tag="CMS0796" /note="Predicted helix-turn-helix motif with score 1395.000, SD 3.94 at aa 63-84, sequence TGLRDIAAEGDVSVGTVTYHFA" gene complement(847907..849964) /locus_tag="CMS_0797" /old_locus_tag="CMS0797" /db_xref="GeneID:6156715" CDS complement(847907..849964) /locus_tag="CMS_0797" /old_locus_tag="CMS0797" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709559.1" /db_xref="GI:170781227" /db_xref="GeneID:6156715" /translation="MTDAAHETSATEAGAADAAVTHRDVWIPMPDGTPLHARIWAPAT DAPVPALLEYLPYRLDDWTAPRDSERHPWYAAHGYASIRVDIRGTGSSDGLFVDEYSA QELDDGVAVIEWIAAQDWCTGAVGVFGISWGGFNGLQLAARAPEALKAVVTVCSTDDR YDDDVHYMGGAVLGIDMAAWGATMFAFNSRPPRPEVVGAGWVDRWRERLESNRPMTPT WLAHQERDDYWRHGSVCEDYGSIGAAVLAVGGWADPYRDAVLRLVANLPGPVKGIVGP WSHQYPDRGLAPGPSIGFLQETLRWWDRWLKGVDTGVEADPALRAFISDSEPPATSYP ERTGRWVAAESWPPPASVAAQPVLPLSAFHGPAAAGDAVVVRSPQRTGLDAGRFFPFG NATDLPPDQRAEDGLSVCFDLLLDEPLDVLGNVLVDLAVTSDLPDANLVVRLCDVAPD GASTLVTRGALNLNTRIDRARNDPMVPGSEEVVRVALVSTGHAFPAGHRMRIAVSSAY WPWIWPHAREATLAVAPSRSSVTLPVWTRAEDDGVRFEEAVQSTPMAIERIPDDSGLP ERSVTHDLATGEWTLDVDPGYGGSRIYPDGLVFTESSRETYRITDGDPTSAVAESRWA IGLEQLGWRARLETTSRVTADADAFRVVNTLRAWARDGGPGTSEVLVADRVFDDLVPR TSA" misc_feature complement(848372..849874) /locus_tag="CMS_0797" /old_locus_tag="CMS0797" /inference="protein motif:HMMPfam:PF02129" /note="HMMPfam hit to PF02129, Peptidase S15, score 2.5e-127" gene complement(849961..851694) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /db_xref="GeneID:6156716" CDS complement(849961..851694) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /codon_start=1 /transl_table=11 /product="putative nucleotide-binding ABC transporter subunit" /protein_id="YP_001709560.1" /db_xref="GI:170781228" /db_xref="GeneID:6156716" /translation="MMPGNVEDTLTGQVRLGTVVRVADLAISYAAGSTDVPVVRGVSF EIRAGRALGLVGESGSGKSTVARTLLAHLRRGSRIVGGSVEVAGDDVFALSPAATREL RGGTAAVVAQNAGQALTPSMRVGRQLREALESHGLPSEDERVEELIRLVRLPDPATIV RRYPHQLSGGQQQRIAIAMAVAARPRVLVLDEPTTALDVVTQAAVLTLIRDLARELGM AVLLVSHDLGVVSTMVDEIAVMRDGVIVEHRPTAELFASPEHAYTRELLAAIPRGPAT AAPLPAPDSEAPMVAADGLVVRYARGLPPAVSDVSFTIAPRETLAVVGESGSGKTTLA TALAGLVPTESGTFRFTGDGVTGDLTRAVAGRSPELRRAVQLVFQNADTSLNPRRTVG AAIARPLKLFTGRASAERVGEILTEVGLSPDFAARLPSQLSGGQRQRVGIARALAAGP QLVIADEITTALDVRVQAEILDLLARLQRDKGLSCLFISHDLAVVRGVADRVAVMTGG RIVEIGPTERVFQGPNHPYTRQLLAATLEPGATELPTVEDVTATWRDAAGGGWRELGD GHRIRDWEDAR" misc_feature complement(850171..850746) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.2e-50" misc_feature complement(850357..850401) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /note="PS00211 ABC transporters family signature." misc_feature complement(850702..850725) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(850966..851550) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.3e-53" misc_feature complement(851152..851196) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /note="PS00211 ABC transporters family signature." misc_feature complement(851506..851529) /locus_tag="CMS_0798" /old_locus_tag="CMS0798" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(851691..852572) /locus_tag="CMS_0798A" /old_locus_tag="CMS0798A" /db_xref="GeneID:6156717" CDS complement(851691..852572) /locus_tag="CMS_0798A" /old_locus_tag="CMS0798A" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="YP_001709561.1" /db_xref="GI:170781229" /db_xref="GeneID:6156717" /translation="MTATPLPTRRGGRLRGWTTPLRASTALSVGLGIIAIHVVLAVLA PWIAGHDPVVTDSTDVLSGTTWAHWLGTDQYGRDVLSRTLNGGRYALVVTFLATTIAV AVGTVVGCVTAYAEGWLDEVVMRIVDALLSVPSILALLVVVTVFGSGLWVIVLAVTVV YAPAVTRVVRGAARTVITQDYVTAARARGEGPLSIVFREILPNVLDVVLVEYAMRASW IVLLISTLSFLGFGANPPTPDWGLMVQENRTALTVVPLGTLAPIVALATLVVGLNLSG DGLSKSLGVDRAQRGMA" gene complement(852569..853594) /locus_tag="CMS_0799" /old_locus_tag="CMS0799" /db_xref="GeneID:6156718" CDS complement(852569..853594) /locus_tag="CMS_0799" /old_locus_tag="CMS0799" /codon_start=1 /transl_table=11 /product="putative oligopeptide ABC transporter integral membrane protein" /protein_id="YP_001709562.1" /db_xref="GI:170781230" /db_xref="GeneID:6156718" /translation="MNVSVQVARRLGTAILTIVLASLFVFLAIQLLPGDVAQQLLGQD ATPEAVATLRESLGLDRNVWLRYGDWLLGAAHGDFGTSLVSGDPVAPTLLVAFRNSML IAVPAMLVGVTLSLVLGVVAGVRRGRASDSVISIVSLVVMSVPEFMVATVLVLLFAIT IPVFPAVVLRGSDATVAELLPSVALPVIVLTLAMAAYIVRTMRSSTIDVMASEFVTTA ELKGLTTRQVVWRHAVPSALLPTLNVVALNVAWLLGGVVVVENVFNYPGMGKLMLESV FTRDLPTIQAIALLSAGVYVVCNLAADLIALALDPRLRTRQRARRTRPARSATRSSRS TRRKARA" sig_peptide complement(852569..852718) /locus_tag="CMS_0799" /old_locus_tag="CMS0799" /note="Signal peptide predicted for CMS0799 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.295 between residues 50 and 51" misc_feature complement(852650..853306) /locus_tag="CMS_0799" /old_locus_tag="CMS0799" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3.5e-48" misc_feature complement(order(852668..852736,852821..852889, 852992..853060,853118..853186,853223..853291, 853493..853561)) /locus_tag="CMS_0799" /old_locus_tag="CMS0799" /note="6 probable transmembrane helices predicted for CMS0799 by TMHMM2.0 at aa 12-34, 102-124, 137-159,179-201, 236-258 and 287-309" gene complement(853591..855248) /locus_tag="CMS_0800" /old_locus_tag="CMS0800" /pseudo /db_xref="GeneID:6156719" misc_feature complement(853899..854888) /locus_tag="CMS_0800" /old_locus_tag="CMS0800" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 1.5e-52" /pseudo misc_feature complement(855078..855146) /locus_tag="CMS_0800" /old_locus_tag="CMS0800" /note="1 probable transmembrane helix predicted for CMS0801 by TMHMM2.0 at aa 35-57" /pseudo misc_feature complement(855078..855110) /locus_tag="CMS_0800" /old_locus_tag="CMS0800" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." /pseudo gene complement(855373..855840) /locus_tag="CMS_0802" /old_locus_tag="CMS0802" /db_xref="GeneID:6156720" CDS complement(855373..855840) /locus_tag="CMS_0802" /old_locus_tag="CMS0802" /codon_start=1 /transl_table=11 /product="putative oxygenase" /protein_id="YP_001709563.1" /db_xref="GI:170781231" /db_xref="GeneID:6156720" /translation="MTITTTTHLNFRGTARQTLDFYQGVFGGQVAVTAYSDFGMPAEA PGADKVVFGQLETADGFRLMAYDVPGQDDADGSAIAGTTTRAQGATITDRTFFQSVRG ETLDEIEGLWRGLAEGATVIEPLAASAWSAGFGMLTDRFGVTWILDVQAPAAG" misc_feature complement(855400..855828) /locus_tag="CMS_0802" /old_locus_tag="CMS0802" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 0.00073" gene 855944..856930 /locus_tag="CMS_0803" /old_locus_tag="CMS0803" /db_xref="GeneID:6156721" CDS 855944..856930 /locus_tag="CMS_0803" /old_locus_tag="CMS0803" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001709564.1" /db_xref="GI:170781232" /db_xref="GeneID:6156721" /translation="MIGSSSRMLSLLSLLQTRRDWPGRILAERLEVTPRTVRRDVERL RELGYEIRSVKGPDGGYRLAAGAELPPLLFDDEQAVAIAVALQAVPAMGVDVDEAAAR ALATVRQVMPSRLRHRVDGIRFTGAEPEPGPGSGAEPRVDPTVLEAVSAAVRDRLTLR VDLADRVGQEGSSRRVQPHAIVARRSRWYLVAWDLDRDDWRTFRLDRMLPRTPAGPRF APRELPAADARTFVAARAKGSEAEDRWPCTGELLVELPARAVAPWIGDGEMEEVSATS TRITVGSWSWTGVLAAVARFDAPFSVIEPEELREAAGVLAARLRSAQEPPRA" misc_feature 855962..856066 /locus_tag="CMS_0803" /old_locus_tag="CMS0803" /note="PS00894 Bacterial regulatory proteins, deoR family signature." misc_feature 856004..856069 /locus_tag="CMS_0803" /old_locus_tag="CMS0803" /note="Predicted helix-turn-helix motif with score 1383.000, SD 3.90 at aa 21-42, sequence WPGRILAERLEVTPRTVRRDVE" repeat_region complement(856945..857122) gene complement(856947..860610) /locus_tag="CMS_0804" /old_locus_tag="CMS0804" /pseudo /db_xref="GeneID:6156722" misc_feature complement(order(857465..857524,857534..857587)) /locus_tag="CMS_0804" /old_locus_tag="CMS0804" /note="2 probable transmembrane helices predicted for CMS0805 by TMHMM2.0 at aa 12-29 and 33-52" /pseudo misc_feature complement(858084..858116) /locus_tag="CMS_0804" /old_locus_tag="CMS0804" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." /pseudo repeat_region complement(858621..858797) /old_locus_tag="CMS0804" misc_feature complement(order(859171..859224,859237..859293, 859327..859395,859405..859458)) /locus_tag="CMS_0804" /old_locus_tag="CMS0804" /note="4 probable transmembrane helices predicted for CMS0808 by TMHMM2.0 at aa 21-38, 42-64, 76-94 and 99-116" /pseudo gene complement(859681..860406) /locus_tag="CMS_0809" /old_locus_tag="CMS0809" /db_xref="GeneID:6156723" misc_feature complement(order(859681..859749,859840..859908, 859966..860034,860053..860112,860170..860238, 860338..860406)) /locus_tag="CMS_0809" /old_locus_tag="CMS0809" /note="6 probable transmembrane helices predicted for CMS0809 by TMHMM2.0 at aa 69-91, 125-147, 167-186,193-215, 235-257 and 288-310" misc_feature 860734..864055 /note="submitted with no further information" gene complement(860932..861414) /locus_tag="CMS_0810" /old_locus_tag="CMS0810" /db_xref="GeneID:6156724" CDS complement(860932..861414) /locus_tag="CMS_0810" /old_locus_tag="CMS0810" /codon_start=1 /transl_table=11 /product="putative plasmid-related protein" /protein_id="YP_001709565.1" /db_xref="GI:170781233" /db_xref="GeneID:6156724" /translation="MLTEAVLASASPSAPGVDWIALIASIVSIGISVLALVQTNREAT ARRVSNVPPELRVVVNELLNTLSRGEQHADHLLALSTPGSHVRVERLDEWAEQLADGR LARLSEQFAAAVGRCRLPDGASTPVSLNHQQLEKLHAAVEAGRRVIMRLNQLTKKEQR" misc_feature complement(861304..861372) /locus_tag="CMS_0810" /old_locus_tag="CMS0810" /note="1 probable transmembrane helix predicted for CMS0810 by TMHMM2.0 at aa 15-37" gene 861453..862064 /locus_tag="CMS_0811" /old_locus_tag="CMS0811" /db_xref="GeneID:6156725" CDS 861453..862064 /locus_tag="CMS_0811" /old_locus_tag="CMS0811" /codon_start=1 /transl_table=11 /product="putative phage-related protein" /protein_id="YP_001709566.1" /db_xref="GI:170781234" /db_xref="GeneID:6156725" /translation="MRDVDIRAALIAGIRRDHPDLSENRVWSELAVVLGASRVDVCLV NGALTGWEIKSPRDNFDRLDAQILHYDQVLDFAHIVVTSKDIQRARMRVPARWGIVEA TEQDGVVSLKRRRQARQNRTPKPLSLAQLLWRDEAMDELRTRGVTGSWSKATRWDLWD ALVAVLTVDELRAAVRSRLKARPAREADRPYTQDGAMSPRLAK" gene complement(861988..863124) /locus_tag="CMS_0812" /old_locus_tag="CMS0812" /db_xref="GeneID:6156726" CDS complement(861988..863124) /locus_tag="CMS_0812" /old_locus_tag="CMS0812" /codon_start=1 /transl_table=11 /product="putative phage-related protein" /protein_id="YP_001709567.1" /db_xref="GI:170781235" /db_xref="GeneID:6156726" /translation="MTYLPVLKARQGELKALENWDDIRRPDLSPVIEVTPWERQEDST VETRDVEDQPEIDSAVRRIKRAWDQKRAIAYIDAAYAEPDLGDGSENWRTSRPVLAQL LHELSASDVSVAPAIRASADASYVSQIGSVLEATGISRALIRVTAEDLDESIIPLRRL VGDVASGLGLPTSDISVLLDFGAVTDEGPMKLAARLARFVLPQLDEVRWASLSVAAGA FPVNLAGVQAFSSARIPRWDYHLWESLRDFDLAIAGGLQFSDYGVTHPTLPVGAAFAA PPQLRYTQDRDWIVRKGKRQERRGHKQFYDICAQILDELGRDATSPEASWGDHYVHEA AASAIEDVTVPARVGTGNASTWRAVATSHHLAYMVDQLRGRGEL" gene complement(863450..863698) /locus_tag="CMS_0813" /old_locus_tag="CMS0813" /db_xref="GeneID:6156727" CDS complement(863450..863698) /locus_tag="CMS_0813" /old_locus_tag="CMS0813" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709568.1" /db_xref="GI:170781236" /db_xref="GeneID:6156727" /translation="MALQVTKSKKDIDGDITGLCGYGWNHSKSEVIGHIRTGLNSYFV SVHGRSVYVRVGTRKGQPYLTTAPDDYSPNNLDNLENC" gene 864027..864857 /locus_tag="CMS_0814" /old_locus_tag="CMS0814" /db_xref="GeneID:6156728" CDS 864027..864857 /locus_tag="CMS_0814" /old_locus_tag="CMS0814" /note="short-chain oxidoreductase" /codon_start=1 /transl_table=11 /product="putative short-chain dehydrogenase" /protein_id="YP_001709569.1" /db_xref="GI:170781237" /db_xref="GeneID:6156728" /translation="MTTWLITGCSTGLGRAFAVEALERGHDVVVTARDAANVQDLTDT YPEHALALDLDVTDPAQVSLAVDEATARFGGVDVLVNNAGYGYRAAIEEGDDADVARL FDTQFHGSVRMIKAVLPGMRERRSGTIVNLSSIGAARTGAGSGYYGAVKAAIEQMTMA LRTELEPLGIVATVVAPGSFRTDFSGRSLTQSSTVIDDYAETAGKRRKENDTTDGTQP NDPALGAKVLVDAVEEGAPFYLLLGGDAVEIVTGALDDLRADVDAWAERSRSTAYDAG" misc_feature 864036..864785 /locus_tag="CMS_0814" /old_locus_tag="CMS0814" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 8e-47" gene complement(864892..865335) /locus_tag="CMS_0815" /old_locus_tag="CMS0815" /db_xref="GeneID:6156729" CDS complement(864892..865335) /locus_tag="CMS_0815" /old_locus_tag="CMS0815" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709570.1" /db_xref="GI:170781238" /db_xref="GeneID:6156729" /translation="MATSPDHPRLLQTVLDTPDPRRLAEFYRELLGFRYRPGDEPEQA GPDPDWLVLVDTDGSRRLAFQLAPGMPAPRWPAGSPPQMLHLDLTVGSVADLERQRSR AVDLGAELLQDRSTDPDEPLYVLRDPAGHPFCIFVAPASSDAAPG" misc_feature complement(864931..865311) /locus_tag="CMS_0815" /old_locus_tag="CMS0815" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 1.4e-10" gene complement(865344..865601) /locus_tag="CMS_0816" /old_locus_tag="CMS0816" /db_xref="GeneID:6156730" CDS complement(865344..865601) /locus_tag="CMS_0816" /old_locus_tag="CMS0816" /codon_start=1 /transl_table=11 /product="putative phage-related protein" /protein_id="YP_001709571.1" /db_xref="GI:170781239" /db_xref="GeneID:6156730" /translation="MTDPTTPGGPTDPPAEDDDDSSSTNTSLGIVFGMLGLVLMLTLD DTRVAGLPFVVLGITFFVMGMRPKKAERVGPAADDTPPPPA" misc_feature complement(order(865407..865460,865473..865526)) /locus_tag="CMS_0816" /old_locus_tag="CMS0816" /note="2 probable transmembrane helices predicted for CMS0816 by TMHMM2.0 at aa 26-43 and 48-65" gene complement(865669..865896) /locus_tag="CMS_0817" /old_locus_tag="CMS0817" /db_xref="GeneID:6156731" CDS complement(865669..865896) /locus_tag="CMS_0817" /old_locus_tag="CMS0817" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709572.1" /db_xref="GI:170781240" /db_xref="GeneID:6156731" /translation="MEGMDEPTVPGDRAAIGAGAGRSRDTALGILFAIGVAMVLARDD LRSLGLLLMVVSAVVFLAATVVRWRRRGARR" misc_feature complement(865699..865758) /locus_tag="CMS_0817" /old_locus_tag="CMS0817" /note="1 probable transmembrane helix predicted for CMS0817 by TMHMM2.0 at aa 47-66" gene complement(865946..866572) /locus_tag="CMS_0818" /old_locus_tag="CMS0818" /db_xref="GeneID:6156732" CDS complement(865946..866572) /locus_tag="CMS_0818" /old_locus_tag="CMS0818" /codon_start=1 /transl_table=11 /product="putative DNA-methyltransferase" /protein_id="YP_001709573.1" /db_xref="GI:170781241" /db_xref="GeneID:6156732" /translation="MTDPDDTVPFLDADALEAADPTAPALDALRLRLADRAEADGSLD VGFTTIDSPVGPLLLAATDRGLIRVAYSREDHDTVLGDLARRLGPRILRAPKRLDQAA RELDEYFAGRRRAFDLPLDRRLSTGFRDRVQRLLPEIPYGSTRTYREVAETAGSPDAT RAVGTACSTNPLPVVIPCHRVLRSDGTLGGYIGGLAAKTTLLELEGRI" misc_feature complement(865949..866200) /locus_tag="CMS_0818" /old_locus_tag="CMS0818" /inference="protein motif:HMMPfam:PF01035" /note="HMMPfam hit to PF01035,Methylated-DNA-[protein]-cysteine S-methyltransferase,score 9.6e-35" misc_feature complement(866027..866047) /locus_tag="CMS_0818" /old_locus_tag="CMS0818" /note="PS00374 Methylated-DNA--protein-cysteine methyltransferase active site." misc_feature complement(866207..866443) /locus_tag="CMS_0818" /old_locus_tag="CMS0818" /inference="protein motif:HMMPfam:PF02870" /note="HMMPfam hit to PF02870, Methylguanine DNA methyltransferase, ribonuclease-like, score 2.9e-07" gene complement(866569..867099) /locus_tag="CMS_0819" /old_locus_tag="CMS0819" /db_xref="GeneID:6156733" CDS complement(866569..867099) /locus_tag="CMS_0819" /old_locus_tag="CMS0819" /codon_start=1 /transl_table=11 /product="putative sigma factor" /protein_id="YP_001709574.1" /db_xref="GI:170781242" /db_xref="GeneID:6156733" /translation="MEMMQPFDRVVTEHGAVVLRVCRAVLGGHADAEDAWSETFLSAL VAYPRLGPRADVRAWLVTIAHRKALDAIRARGRRAIPVDEVPERVSDLGVPDSSDPDL WRAVAALPERQRLAVAYRYLGGLPHAEVAEIVGGTPEAVRRAAADGVASLRRTMGTDP PRGVRAPAPTTTGGRP" misc_feature complement(866638..866787) /locus_tag="CMS_0819" /old_locus_tag="CMS0819" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 1.1e-10" misc_feature complement(866662..866727) /locus_tag="CMS_0819" /old_locus_tag="CMS0819" /note="Predicted helix-turn-helix motif with score 1370.000, SD 3.85 at aa 125-146, sequence LPHAEVAEIVGGTPEAVRRAAA" misc_feature complement(866866..867072) /locus_tag="CMS_0819" /old_locus_tag="CMS0819" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 9.2e-17" gene 867415..868176 /locus_tag="CMS_0820" /old_locus_tag="CMS0820" /db_xref="GeneID:6156734" CDS 867415..868176 /locus_tag="CMS_0820" /old_locus_tag="CMS0820" /codon_start=1 /transl_table=11 /product="putative two component system response regulator" /protein_id="YP_001709575.1" /db_xref="GI:170781243" /db_xref="GeneID:6156734" /translation="MGNTLSPAARDDEQAVPGQASGEMPGDAPRVLRVFVVDEEAPIT QLLSLALRMEGWDVRVFATGRAAIAAAVEAAPDAILLDMMLPDVSGVEVVGELRRAGV ATPMLFLTGRDSLEDRLAAFGAGADDYVTKPFGLEDVVETLRVLFRRRGLAPTMITAG DLVLDPATGEAWLAGVPLELDPMDLVVVRALAEEPTRRLSRRELVHRLTDAGWDLVAP RALLDLPSVTGRRAGRDQVVLLAVAGDDLVLAPAV" misc_feature 867508..867867 /locus_tag="CMS_0820" /old_locus_tag="CMS0820" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 9.9e-32" gene 868446..869714 /locus_tag="CMS_0821" /old_locus_tag="CMS0821" /db_xref="GeneID:6156735" CDS 868446..869714 /locus_tag="CMS_0821" /old_locus_tag="CMS0821" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001709576.1" /db_xref="GI:170781244" /db_xref="GeneID:6156735" /translation="MTRPTPAAGRGRSFRRAAAGACLSASLVILPLAMAPAAHAETVP VDSAPAAVEAPAATPTPAVETPAPDATPTPAPTETADETAPVADAPVETTPTPAVPTT PGTPSTGLPSLEPTAPVVELPFTWTTPDRGVALPINEAVPFAGTGTAGSIVTASYFNA VGVKSIAGIGIVGADGTYAFPASFTELLQDSKTASVTLTQVGLDLTVKGEIRGLVRFA EAPVGPFVRAEASFSTISPISVAQATSILGGVKVNATGYLRYEAVEVMVTAPDGRVIQ ISDENGGVGVGTRSLKDLVRADVDGTFAQPIILFGDVQPGTYKVSVAGLESGLTQGGT VELTAADAGGPVIPGLPGVPTPTPTTPSIDPAGTPAKPITKPAAHHDDTLPVTGTDGA AALGLGGLGALMALAGAGTLVARRRLRSAE" sig_peptide 868446..868565 /locus_tag="CMS_0821" /old_locus_tag="CMS0821" /note="Signal peptide predicted for CMS0821 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.838 between residues 40 and 41" misc_feature order(868482..868550,869619..869687) /locus_tag="CMS_0821" /old_locus_tag="CMS0821" /note="2 probable transmembrane helices predicted for CMS0821 by TMHMM2.0 at aa 13-35 and 392-414" misc_feature 869595..869612 /locus_tag="CMS_0821" /old_locus_tag="CMS0821" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." gene 869890..871104 /locus_tag="CMS_0822" /old_locus_tag="CMS0822" /db_xref="GeneID:6156736" CDS 869890..871104 /locus_tag="CMS_0822" /old_locus_tag="CMS0822" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709577.1" /db_xref="GI:170781245" /db_xref="GeneID:6156736" /translation="MSDTQPSAPATTTGGALGVAMIGHGFMGAAHSQAWRVAPAFFDL PLAPRMVSVVGRDQARTQESADRWGWDRAETDWRAAIERDDIDVVDICSPGSTHVEIA VAALEAGKHVLCEKPLANTVEEAEIMAAAAEKAAVKGIRAMVGFSYRRVPAITFARDL VAQGAIGELRQVRALYLQDWLTDAEGPMTWRLDKEAAGSGALGDIGAHIVDAVQFITG EKLDAVSGLLRTFVEERPLLAETRGLGGVASSERGQVTVDDAAYFTGKLAGGALASFE ATRMATGRKNALRLEFSGSDGAISFDLERLNEIELYDATAPADRLGFRRILVTEPEHP YTAAWWPTGHGLGYEHAFTHQVRDLVHDIAAGREPQPSFADGLRVQRVLDAVERSSAD GSAWKTVDPAAS" misc_feature 869938..870327 /locus_tag="CMS_0822" /old_locus_tag="CMS0822" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 1.4e-35" misc_feature 870361..870774 /locus_tag="CMS_0822" /old_locus_tag="CMS0822" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 5.2e-09" gene 871155..871877 /locus_tag="CMS_0823" /old_locus_tag="CMS0823" /db_xref="GeneID:6156737" CDS 871155..871877 /locus_tag="CMS_0823" /old_locus_tag="CMS0823" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709578.1" /db_xref="GI:170781246" /db_xref="GeneID:6156737" /translation="MQARQERTLRAALSASVCTLVTATLHAAAGGGIPHPLVLALALV LGVVICFVLGGRRVALAHLVLAIGATQGVLHAAFTFGGSATGPDTASAAGMDMGGAAS GAAVAAATAGHSHAHAAADAARALAGPSAMAGMPADHDGAMLLAHVIAGIVSVCSLRA GAGALRRVVRALALRVGAAVGGAVGALVGAAVALAAALAEPATAPRPRRLATDLRPAR LESLLVARIRGRRGPPLGALAA" sig_peptide 871155..871235 /locus_tag="CMS_0823" /old_locus_tag="CMS0823" /note="Signal peptide predicted for CMS0823 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.737 between residues 27 and 28" misc_feature order(871188..871241,871251..871319,871332..871400, 871575..871643,871680..871748) /locus_tag="CMS_0823" /old_locus_tag="CMS0823" /note="5 probable transmembrane helices predicted for CMS0823 by TMHMM2.0 at aa 12-29, 33-55, 60-82, 141-163 and 176-198" gene 872050..872742 /locus_tag="CMS_0824" /old_locus_tag="CMS0824" /db_xref="GeneID:6156738" CDS 872050..872742 /locus_tag="CMS_0824" /old_locus_tag="CMS0824" /note="No obvious LPXTG motif" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001709579.1" /db_xref="GI:170781247" /db_xref="GeneID:6156738" /translation="MPSRTPSTSRRVIAGAAVGLALALSAPLAASAHVELDASSTAPA SLSVLTFAVGHGCEGSATTSLAIRFPADVQAVKPTLAPGWSVAEQESADGTTVTYTAD TPLPDSLRATVQVEALLPVDGAAGDVVAFPTLQTCVAGSTDWAETPAAGTEPDHPAPA ITLTDAATTTGSGATASGTGSATGAEAAVATAAPADPVARLLGLGALVVGVVAVMLLT IGMRRPQQGGRR" sig_peptide 872050..872145 /locus_tag="CMS_0824" /old_locus_tag="CMS0824" /note="Signal peptide predicted for CMS0824 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.353 between residues 32 and 33" misc_feature order(872083..872151,872641..872709) /locus_tag="CMS_0824" /old_locus_tag="CMS0824" /note="2 probable transmembrane helices predicted for CMS0824 by TMHMM2.0 at aa 12-34 and 198-220" gene 872739..874190 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /db_xref="GeneID:6156739" CDS 872739..874190 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709580.1" /db_xref="GI:170781248" /db_xref="GeneID:6156739" /translation="MTAVDDRAGEATTPAVPAPAITRPQRGWFLPLLLRLHFLAGILV GPFILTAALSGAAYALAPTAEQVVYAHELHAPATGSTVPLAQQVEAAEAVVGGSGTLV AVRPAPAPGDTTRVMFTGDGLIPGQTRAIFVDPADASIRGDLPVYGTSGALPLRTAIS HFHRTLGLGDPGRIYSELAASWLGIVTLAGLGLWIARWRRSPRRRDLVRPDGKATGYR RILSWHASTGVWLVAGALFLSATGITWSQYGGQNVTDLRAALSWQTPTLTTALPGTGA GAASAVDPHAGHHASAAPTTTPAVDPATFDEVLRVAQGVNVDTGLVEITPPKDASTAW TVSEIQRSFPTEVDQVAVDGSTLQVVGRTDFADYPLPAKLARWGIDTHQGSMFGLPNQ LLLAATALGIAAMVVFGYLMWWKRRPGVARPGRPAPAGALVRAPWWGIAAVVAVGVGV GLFLPLVGIPLVGFVLLDALITAARVHRAGAAA" misc_feature order(872832..872900,873258..873326,873405..873473, 873912..873980,874041..874109) /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /note="5 probable transmembrane helices predicted for CMS0825 by TMHMM2.0 at aa 32-54, 174-196, 223-245, 392-414 and 435-457" misc_feature 872835..872915 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /inference="protein motif:HMMPfam:PF03929" /note="HMMPfam hit to PF03929, PepSY-associated TM helix,score 0.27" misc_feature 873180..873212 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /note="PS00138 Serine proteases, subtilase family, serine active site." misc_feature 873240..873320 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /inference="protein motif:HMMPfam:PF03929" /note="HMMPfam hit to PF03929, PepSY-associated TM helix,score 0.0067" misc_feature 873396..873476 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /inference="protein motif:HMMPfam:PF03929" /note="HMMPfam hit to PF03929, PepSY-associated TM helix,score 13" misc_feature 873549..873566 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature 873897..873977 /locus_tag="CMS_0825" /old_locus_tag="CMS0825" /inference="protein motif:HMMPfam:PF03929" /note="HMMPfam hit to PF03929, PepSY-associated TM helix,score 11" gene complement(874228..875241) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /db_xref="GeneID:6156740" CDS complement(874228..875241) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001709581.1" /db_xref="GI:170781249" /db_xref="GeneID:6156740" /translation="MREVAARAGVSIATVSFVVNGTKAVSEPTRRAVTEAMQELGYRN NVVARALASKRTRIVALLFPADVQRLSRIALEIFMSAATRASELGYHLVLWPTGTSPD DVSDLVSGRLVDGVIVMEVRMDDSRIRELAALDVPYVSIGRTADTHDLPFVDMDFERT VADGLDHLQGLGHRRFGLMVEDLEGGPLRGYGPTTRTERAFLRETAARGIGGAVARCA PTPVGGRAAAGELLAADPGITAVMLLNDPAARGLISGLDHAGRRVPEDVSLLSLASST EMGALVEPALSTMDAPGPELGRLAVEMLLARLDGTATELPHALLPCRLHEAASTGPAP AAR" sig_peptide complement(874228..874305) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /note="Signal peptide predicted for CMS0826 by SignalP 2.0 HMM (Signal peptide probability 0.812) with cleavage site probability 0.500 between residues 26 and 27" misc_feature complement(874258..875076) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.00014" misc_feature complement(874438..874488) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /note="PS00216 Sugar transport proteins signature 1." misc_feature complement(875185..875241) /locus_tag="CMS_0826" /old_locus_tag="CMS0826" /note="PS00356 Bacterial regulatory proteins, lacI family signature." gene complement(875304..876026) /locus_tag="CMS_0827" /old_locus_tag="CMS0827" /db_xref="GeneID:6156741" CDS complement(875304..876026) /locus_tag="CMS_0827" /old_locus_tag="CMS0827" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709582.1" /db_xref="GI:170781250" /db_xref="GeneID:6156741" /translation="MGTSSVRILFSVVRIATAIAAVIGVIAQYHVNYAYWQDLGITGF AGKSLDFALFFTVDANLLGAVVLVVGGVRLARGRVTDPGVGWVTLRLASTVYLVITGI VWNLLLRGQPQPEPLKLDWADQIVHVAVPLIMLLDWILAPDRRPLRAGAIGRVIAFPL AWIAVTLARGPFTGDEVFRTATYYPYGFLNPDSSPGGYGTVAAYVVGLTLAVCAITGA LVLVSRFRAPTDPHRAGAPAIH" sig_peptide complement(875304..875384) /locus_tag="CMS_0827" /old_locus_tag="CMS0827" /note="Signal peptide predicted for CMS0827 by SignalP 2.0 HMM (Signal peptide probability 0.739) with cleavage site probability 0.269 between residues 27 and 28" misc_feature complement(order(875358..875426,875508..875576, 875601..875660,875703..875771,875808..875876, 875934..876002)) /locus_tag="CMS_0827" /old_locus_tag="CMS0827" /note="6 probable transmembrane helices predicted for CMS0827 by TMHMM2.0 at aa 9-31, 51-73, 86-108, 123-142,151-173 and 201-223" gene complement(876077..877249) /locus_tag="CMS_0828" /old_locus_tag="CMS0828" /db_xref="GeneID:6156742" CDS complement(876077..877249) /locus_tag="CMS_0828" /old_locus_tag="CMS0828" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709583.1" /db_xref="GI:170781251" /db_xref="GeneID:6156742" /translation="MDYAFSYLGGAQTAVVQQALALARAGHAVTVAAPDATSVRELHG TGVALHDIAPTFPVPLLGLPLIRADAATRRDLGALMDEAGTDLVVTHSEHGLAATALR LGRERGIPTLHTVHTFFLRGPAWGGFLAPAVTAVHRAMTGLPDPRVRLAPRRLDSALR GTTLAACRAADLVLSPSEHQAVALRRAGLPAVEVISNTSCTARGASAELPASGALRLV WAARFAPEKRLDVMLEAMALVAERSGPDAVHLDLAGGRPRAAVPPGVTAHGRVSTATV TALLRGAHAAVITSLGFDNQPMIAMEAFAEGRPALVSDPVLAAEFGGAAVLADGTDAE GLATVILRLAADRRLLDAHARDARSLASEVAPAAHARSVEEACRRVVGARRGSASA" misc_feature complement(876170..876649) /locus_tag="CMS_0828" /old_locus_tag="CMS0828" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 3.5e-05" gene complement(877416..878027) /locus_tag="CMS_0829" /old_locus_tag="CMS0829" /db_xref="GeneID:6156743" CDS complement(877416..878027) /locus_tag="CMS_0829" /old_locus_tag="CMS0829" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709584.1" /db_xref="GI:170781252" /db_xref="GeneID:6156743" /translation="MRTRRTLVATGVALLAAVGAAVLASEGIHRLASTRGLGRAPGRP DGTVGREVVVVLGLGNASPRANRINRYRVRAALRSIDPRAASTALVLCGGSVMGDEPE ARILARFARDELGYAGPVVLEEASTSTRENVANAIPLIEDADTIRIVSDPVHAEEARG YLRAARPDLADRLASADDYRFGEMTWMKPLAIAVALLRRVRSA" sig_peptide complement(877416..877487) /locus_tag="CMS_0829" /old_locus_tag="CMS0829" /note="Signal peptide predicted for CMS0829 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.750 between residues 24 and 25" misc_feature complement(877431..877883) /locus_tag="CMS_0829" /old_locus_tag="CMS0829" /inference="protein motif:HMMPfam:PF02698" /note="HMMPfam hit to PF02698, Protein of unknown function DUF218, score 2.3e-05" misc_feature complement(877941..878009) /locus_tag="CMS_0829" /old_locus_tag="CMS0829" /note="1 probable transmembrane helix predicted for CMS0829 by TMHMM2.0 at aa 7-29" gene complement(878037..878228) /locus_tag="CMS_0829A" /old_locus_tag="CMS0829A" /db_xref="GeneID:6156744" CDS complement(878037..878228) /locus_tag="CMS_0829A" /old_locus_tag="CMS0829A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709585.1" /db_xref="GI:170781253" /db_xref="GeneID:6156744" /translation="MNHGPPWSRPRRRRRRRMDAHGIVAWLKVEHGLGHGHADAVVAF VKAARSVRGRARPSRIARP" gene 878364..878903 /locus_tag="CMS_0830" /old_locus_tag="CMS0830" /db_xref="GeneID:6156745" CDS 878364..878903 /locus_tag="CMS_0830" /old_locus_tag="CMS0830" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709586.1" /db_xref="GI:170781254" /db_xref="GeneID:6156745" /translation="MTDHPQPDPGAPLSGVPFDGAPLDSDVEVDDDPGRPVHLRWSSL GLVALGGAVGTGIREALALTWPAPAGGIPVTILLINVVGAFVLGALLEALARRGPDEG RRRAIRLLVGTGVLGGFTTYSSLATDASSLTGSALGTALAYAGITLVAGAAASVAGIA AGAAIHRRSAAGRATGAAS" misc_feature order(878490..878549,878577..878645,878682..878741, 878784..878852) /locus_tag="CMS_0830" /old_locus_tag="CMS0830" /note="4 probable transmembrane helices predicted for CMS0830 by TMHMM2.0 at aa 91-110, 120-142, 155-174 and 189-211" misc_feature 878493..878849 /locus_tag="CMS_0830" /old_locus_tag="CMS0830" /inference="protein motif:HMMPfam:PF02537" /note="HMMPfam hit to PF02537, Camphor resistance CrcB protein, score 4.1e-06" gene 878900..879280 /locus_tag="CMS_0831" /old_locus_tag="CMS0831" /db_xref="GeneID:6156746" CDS 878900..879280 /locus_tag="CMS_0831" /old_locus_tag="CMS0831" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709587.1" /db_xref="GI:170781255" /db_xref="GeneID:6156746" /translation="MTGPFVFALICVAGGVGAALRLLLDGVIRGRLGAAYPWGTTVIN VTGSFGLGLLTGAAAQAGLPHAVLLILGGGLMGGYTTFSTASLETVRLAQAGRVGAAV ANGVGMLVVCIAAAGLGIALGQAL" misc_feature order(878912..878971,878999..879067,879086..879154, 879197..879265) /locus_tag="CMS_0831" /old_locus_tag="CMS0831" /note="4 probable transmembrane helices predicted for CMS0831 by TMHMM2.0 at aa 5-24, 34-56, 63-85 and 100-122" misc_feature 878918..879268 /locus_tag="CMS_0831" /old_locus_tag="CMS0831" /inference="protein motif:HMMPfam:PF02537" /note="HMMPfam hit to PF02537, Camphor resistance CrcB protein, score 3.8e-28" gene 879277..879756 /locus_tag="CMS_0832" /old_locus_tag="CMS0832" /db_xref="GeneID:6156747" CDS 879277..879756 /locus_tag="CMS_0832" /old_locus_tag="CMS0832" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709588.1" /db_xref="GI:170781256" /db_xref="GeneID:6156747" /translation="MTALSPVASAADVEALHAFLAAADLTVTGLDDPGVRLWIQRDAA GRITGSTGFELSADGRHALIRSVAVAPSLRSGGLGSTLARHALAEATAAGAERAWLFS RRSGPFWQGLGFAEADRDALAAALPGARQVVAFRASGQLAREVAWSRALGATASGAA" misc_feature 879379..879621 /locus_tag="CMS_0832" /old_locus_tag="CMS0832" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 8.4e-08" gene 879766..880359 /locus_tag="CMS_0833" /old_locus_tag="CMS0833" /db_xref="GeneID:6156748" CDS 879766..880359 /locus_tag="CMS_0833" /old_locus_tag="CMS0833" /codon_start=1 /transl_table=11 /product="putative nudix hydrolase" /protein_id="YP_001709589.1" /db_xref="GI:170781257" /db_xref="GeneID:6156748" /translation="MSSADAQPEPERTWTTTGRRDLHRGRVVLVEHDVQLPDGSASRY EVDESVPFAVATLVIDGDAVILSRQYRHPLGRWILDLPGGAGDASEQPADAARRELEE ELGLVAPDLVPLRTYAVNPGRASWLVHVFACTTPTTAGVADRSDPSEQVRLVRMPVAE LDALIAAGRIEDPTLLIARAAAAEQGLLPPVGQVASR" misc_feature 879913..880299 /locus_tag="CMS_0833" /old_locus_tag="CMS0833" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 3.2e-16" misc_feature 880015..880074 /locus_tag="CMS_0833" /old_locus_tag="CMS0833" /note="PS00893 mutT domain signature." gene complement(880373..881380) /locus_tag="CMS_0834" /old_locus_tag="CMS0834" /db_xref="GeneID:6156749" CDS complement(880373..881380) /locus_tag="CMS_0834" /old_locus_tag="CMS0834" /EC_number="6.3.2.4" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase" /protein_id="YP_001709590.1" /db_xref="GI:170781258" /db_xref="GeneID:6156749" /translation="MRISVLFGGESEERDVSIASAAQVVPALRQLGHEVVAVDTAHGA LDAAAEARILTPDVGLHPPTSAELATASAGGSGAVLRLPADLRDSDLVFLALHGGSGE DGRLQALLELAGIPFTGSGSLGSALAMDKDVAKTLLRAGGVRTPDWLIDPEPGAVEAA LGFPVVVKPTGQGSTVGLSVVRAAADLPAALELAARHGTVMVERFVRGRELTVGVLDG EALAVGEIGVPVDEAFTYAAKYQAGAIAETFPADLPSEVAEEARAAALAAHRILRLDG YSRSDFRLDDAGILWIIEANSLPGLTATSLLPQSAAAVGIGYAELCERIARVVLRGRA G" misc_feature complement(880400..880993) /locus_tag="CMS_0834" /old_locus_tag="CMS0834" /inference="protein motif:HMMPfam:PF07478" /note="HMMPfam hit to PF07478, D-alanine--D-alanine ligase, C-terminal, score 4.6e-55" misc_feature complement(880994..881380) /locus_tag="CMS_0834" /old_locus_tag="CMS0834" /inference="protein motif:HMMPfam:PF01820" /note="HMMPfam hit to PF01820, D-alanine--D-alanine ligase, N-terminal, score 3.6e-28" misc_feature complement(881057..881092) /locus_tag="CMS_0834" /old_locus_tag="CMS0834" /note="PS00843 D-alanine--D-alanine ligase signature 1." gene 881561..882085 /locus_tag="CMS_0835" /old_locus_tag="CMS0835" /db_xref="GeneID:6156750" CDS 881561..882085 /locus_tag="CMS_0835" /old_locus_tag="CMS0835" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709591.1" /db_xref="GI:170781259" /db_xref="GeneID:6156750" /translation="MHVRTTASRPRRTRVALAALAIAGSALAGVGTAPAAQASAAPVA APAGAATTATVAPAGDPVAASDRYVRRQTVHFSAHMQRYGDVVVSILIQGPNPGNGVP GWSRCVDLPQSGLPIWTDIGVDLLANSRYTVSSYSDFACSRGANYRWTTGTVDTRWTH WIVYPIRSPHVTLR" sig_peptide 881561..881707 /locus_tag="CMS_0835" /old_locus_tag="CMS0835" /note="Signal peptide predicted for CMS0835 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.518 between residues 49 and 50" misc_feature 881597..881665 /locus_tag="CMS_0835" /old_locus_tag="CMS0835" /note="1 probable transmembrane helix predicted for CMS0835 by TMHMM2.0 at aa 13-35" gene complement(882180..882764) /locus_tag="CMS_0836" /old_locus_tag="CMS0836" /db_xref="GeneID:6156751" CDS complement(882180..882764) /locus_tag="CMS_0836" /old_locus_tag="CMS0836" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709592.1" /db_xref="GI:170781260" /db_xref="GeneID:6156751" /translation="MATTPELEEEHVRRLTAGLFTSVDGVVESPHLFQYDSFDPELGA GLGRMISSVTTAVMGRRGYEDWSAHWPAAPADDPFAAFVNPLEKLVATRTLTGDLGWN ATRIEGDALAAIARLKETEGGEIAVLSSISLTRALLFAGLLDELTLMIHPVVAGAGRR LFEPDDPTTRLELRRSEITSAGNAVLTYARRTGD" misc_feature complement(882210..882728) /locus_tag="CMS_0836" /old_locus_tag="CMS0836" /inference="protein motif:HMMPfam:PF01872" /note="HMMPfam hit to PF01872, Bacterial bifunctional deaminase-reductase, C-terminal, score 9e-12" gene 883039..884208 /locus_tag="CMS_0837" /old_locus_tag="CMS0837" /db_xref="GeneID:6156752" CDS 883039..884208 /locus_tag="CMS_0837" /old_locus_tag="CMS0837" /codon_start=1 /transl_table=11 /product="putative sugar binding protein" /protein_id="YP_001709593.1" /db_xref="GI:170781261" /db_xref="GeneID:6156752" /translation="MLAGCSGGGGGGSSSGGDPKTITVTDYYNEGNDDTVIGDTLQKC GESLGVTIERTSIPGSSLIQKVLQQASSRTLPDVLMLDNPDLQQIAATGALAPLEDFG ISTDGYAKGVVDAGTYEGKTYGLAPTVNTIALFYNTQMLADAGIQPPTTWDELKTAAA ALKDGDRYGIAMDANATYEGTWQFLPFMWSNGGDEKDIATPETAEALQLWTDLVKDGS ASQSVVNWTQSDVNDQFMAGKTAMMINGPWQIPALTESGVDYGIAKLPAPEAGGTAVA PLGGEVWTVPQTGDKAKQQTAAKVVECLNSDENQLEMATKRFTIPSKTAVATEFGQQV PEEQVFVDLVADARARTGELGAEWPKAATKIYTAVQSALTGQSSPEDALENAEQG" misc_feature 883039..883971 /locus_tag="CMS_0837" /old_locus_tag="CMS0837" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 4.9e-26" misc_feature 883381..883404 /locus_tag="CMS_0837" /old_locus_tag="CMS0837" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 884283..885197 /locus_tag="CMS_0838" /old_locus_tag="CMS0838" /db_xref="GeneID:6156753" CDS 884283..885197 /locus_tag="CMS_0838" /old_locus_tag="CMS0838" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709594.1" /db_xref="GI:170781262" /db_xref="GeneID:6156753" /translation="MARGPVRRRPRFRGERFFQAMFLVPAIAYLVLFFGFPVVKNIVM SFQEYTTTTFYTGEAPWVGFANYASVLSSGIFSTALLNTFLFTAGSIAGQFVIGLVLA LFFRRSFPLNGLLRALLLLPWLLPLIVSSAVWKWILDQDSGVLNQALLGSGLVQDPVP WLTSPAFALITVIAVNVWIGIPFNTTILYGGLQDIPPELYEAGSLDGATGWKGFRHIT WPLLRPVVGVVLVLGVVYTIKVLDIILGLTNGGPANSTQTIATQSYTLSFQQFDFGSG AALSNILIAISAVFAVVYLRANRKAVDD" sig_peptide 884283..884423 /locus_tag="CMS_0838" /old_locus_tag="CMS0838" /note="Signal peptide predicted for CMS0838 by SignalP 2.0 HMM (Signal peptide probability 0.958) with cleavage site probability 0.450 between residues 47 and 48" misc_feature order(884331..884399,884529..884597,884616..884684, 884757..884825,884955..885023,885099..885167) /locus_tag="CMS_0838" /old_locus_tag="CMS0838" /note="6 probable transmembrane helices predicted for CMS0838 by TMHMM2.0 at aa 17-39, 83-105, 112-134, 159-181,225-247 and 273-295" misc_feature 884508..885191 /locus_tag="CMS_0838" /old_locus_tag="CMS0838" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3.5e-07" gene 885190..886071 /locus_tag="CMS_0839" /old_locus_tag="CMS0839" /db_xref="GeneID:6156754" CDS 885190..886071 /locus_tag="CMS_0839" /old_locus_tag="CMS0839" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709595.1" /db_xref="GI:170781263" /db_xref="GeneID:6156754" /translation="MTDTAARAARAARPALPRPVGSRKPRADRSWVSTVIGVVILAVM LFPVYWMVNISLQPAGPAIQAAWFPFEAQFQGYATALSEQGRALGTSLVIALGSVVLS LAIATPAAYALAQFRFRWIDVVLFGILISQMIPGIVVANALYAAYNDLGLLNSIPGLI LADSTAGIPFAILIMRAFMAGIPPSIIEAAKVDGAGNFRAFRSIVLPVSLNAVITAGL FTFLFTWSDFLFALTLTTTDDVRPITLGIYQYIGTYTADWSTVMATAVLASLPAIILL LAAQRFIAAGATGGAVK" misc_feature order(885277..885345,885463..885531,885556..885624, 885667..885735,885796..885864,885967..886026) /locus_tag="CMS_0839" /old_locus_tag="CMS0839" /note="6 probable transmembrane helices predicted for CMS0839 by TMHMM2.0 at aa 30-52, 92-114, 123-145, 160-182,203-225 and 260-279" misc_feature 885439..886056 /locus_tag="CMS_0839" /old_locus_tag="CMS0839" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.2e-12" misc_feature 885724..885810 /locus_tag="CMS_0839" /old_locus_tag="CMS0839" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 886151..886921 /locus_tag="CMS_0840" /old_locus_tag="CMS0840" /db_xref="GeneID:6156755" CDS 886151..886921 /locus_tag="CMS_0840" /old_locus_tag="CMS0840" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709596.1" /db_xref="GI:170781264" /db_xref="GeneID:6156755" /translation="MTDPTSPLRVTVWGENRHEQIEQHVRDRYPTGMHGAVAEGVQEN LPDAHVEIATMDQPEHGLTEELLARTDVLTWWGHAAHAEVDDQVVERVHRHVLDGMGL IVLHSGHWSKIFTKLMGTTCTLRWRSEHDRELVWTVNPQHPITRGVPNPIVIDEQEMY GEYFDVPTPDELVFISGFTGGEVFRSGMTYRRGFGRIFFFSPGDQDFPVYHHPDVRRV IANACEWARPDRRETPTLLRYELGEYYDGTDYAGALER" misc_feature 886247..886879 /locus_tag="CMS_0840" /old_locus_tag="CMS0840" /inference="protein motif:HMMPfam:PF06283" /note="HMMPfam hit to PF06283, Protein of unknown function DUF1037, score 1.6e-100" gene 886918..888138 /locus_tag="CMS_0841" /old_locus_tag="CMS0841" /db_xref="GeneID:6156756" CDS 886918..888138 /locus_tag="CMS_0841" /old_locus_tag="CMS0841" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709597.1" /db_xref="GI:170781265" /db_xref="GeneID:6156756" /translation="MTAGDARTGPAHRIVAPADGARLRVVQVGAGGMGQAWLKTIAED PDVELVGVVDLDEQAARAGAAAHGASAEASTDLGQLIARLRPDAVIDVTIPRAHHPVT TQALFAGIPVLGEKPVALTVAEGLSLAAAAEITGELFMVSQSRRYNDHLVALKRRAAD LGGVGIVTTEFFKAPHFGGFREEMDDVLLLDMAVHQFDAVRYLLDADPVSVYCESYNP AWSWYRGDAGATVVFAFEGGVRYVYTGSWCSPGAETSWNGSWRVSGAHGTALWDGDHD PTSEIADAPDGPPAEPAAAGSVGVEIAGSLRAFVRALRTGERPHGEVHGNVMSLAMVE AAIESKDTGRRLAIDDVLERAYATALADERRDDVRARLEAWRERGVRETLQGPPASAG AAGVAAVVRPAAAG" misc_feature 886984..887346 /locus_tag="CMS_0841" /old_locus_tag="CMS0841" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 1.9e-23" misc_feature 887371..887691 /locus_tag="CMS_0841" /old_locus_tag="CMS0841" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 1.5e-05" gene 888159..889514 /locus_tag="CMS_0842" /old_locus_tag="CMS0842" /db_xref="GeneID:6156757" CDS 888159..889514 /locus_tag="CMS_0842" /old_locus_tag="CMS0842" /codon_start=1 /transl_table=11 /product="ROK family transcriptional regulator" /protein_id="YP_001709598.1" /db_xref="GI:170781266" /db_xref="GeneID:6156757" /translation="MTGHEAGDAARAPEPPAPVQDPARLARAVPLAPDPRSREIPPTG DARSRGTTPDHVRRSNLATVLQIVHETGPASRSELTRETGLNRSTIAALVGELQELGL VVESEPPGTNRVGRPSPIVSADPRVVVFAVNPEIDAVTVGLVGLDGVVQQRIRRDTAG IPTAARAAELAGAIIAELRAELCATRPDARVLGIGVAVPGLVRFDGGIVRLAPHLGWV DEPFAALLAEATGLPALAANDASLAAVAEGRFGSGRDVDDLVYLNGGASGVGGGVLIG RRPFGGAEGYGGELGHTLVDSGGELCHCGAVGCLETTVGQDALLEVTGLPRARADELG DVLAAALEAGDPAITAEVERQIANLAVALRNVVNIFNPSLVVLGGFLGSLHAADPDRI LARATAQALPGAREALRIRRAALGPDRLMIGAAELAFARVLVDPSGVMRAAADAERST A" misc_feature 888378..888443 /locus_tag="CMS_0842" /old_locus_tag="CMS0842" /note="Predicted helix-turn-helix motif with score 1222.000, SD 3.35 at aa 74-95, sequence ASRSELTRETGLNRSTIAALVG" misc_feature 888549..889115 /locus_tag="CMS_0842" /old_locus_tag="CMS0842" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 4.4e-25" gene 889511..890167 /locus_tag="CMS_0843" /old_locus_tag="CMS0843" /db_xref="GeneID:6156758" CDS 889511..890167 /locus_tag="CMS_0843" /old_locus_tag="CMS0843" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709599.1" /db_xref="GI:170781267" /db_xref="GeneID:6156758" /translation="MSVPVDLVILDCDGVLVDSEVLAVEVDKRVLAELGWDITTEEIV ERFVGKSHATSTAEVAAHRGRDLADDWDAPYAHWYREAFEEHLRPVDGIAEALDAIAL PTCVASSGGHPKIRANLARTGLLARFDGRISSATEVAHGKPAPDLFLLAASRMGVDPE RCVVVEDSPYGVQGALAAGMRALGYAGGLTPADRLRDAGATVFDDMRDLPRLLRELAV" misc_feature 889523..890074 /locus_tag="CMS_0843" /old_locus_tag="CMS0843" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 4.4e-26" gene complement(890205..891107) /locus_tag="CMS_0844" /old_locus_tag="CMS0844" /db_xref="GeneID:6156759" CDS complement(890205..891107) /locus_tag="CMS_0844" /old_locus_tag="CMS0844" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709600.1" /db_xref="GI:170781268" /db_xref="GeneID:6156759" /translation="MGVAAAVLGLLPWILSGLRLPPQNLWAEDVTDAGQMPIALLPFN QYTAGLLAAVIVVGGGIAGAAARGLRSRLPRHGSWLVVAGLLLVQVVALVQTSAVTSA GLGVDDVSGAGDRTGASISEAQVYLVAFVGGTAATVLLAGLVAALVARAPAGLAVVAT AFPVVLLGEWLGGLVSPGPTGALSGTAYALLPVISWVPPVVLGVAIALTVLRTVGRVI GSVVAVLLVWVGTAVVVGVTYALGNRSMLRYPLELLDASGMVGGAVLRGQGGVLGQLA VAVVVGILGALVVHAVRRRVVSAA" sig_peptide complement(890205..890285) /locus_tag="CMS_0844" /old_locus_tag="CMS0844" /note="Signal peptide predicted for CMS0844 by SignalP 2.0 HMM (Signal peptide probability 0.980) with cleavage site probability 0.976 between residues 27 and 28" misc_feature complement(order(890232..890300,890388..890456, 890475..890543,890586..890645,890664..890732, 890811..890879,890913..890981)) /locus_tag="CMS_0844" /old_locus_tag="CMS0844" /note="7 probable transmembrane helices predicted for CMS0844 by TMHMM2.0 at aa 43-65, 77-99, 126-148, 155-174,189-211, 218-240 and 270-292" gene 891381..891971 /gene="aroQ" /locus_tag="CMS_0845" /old_locus_tag="CMS0845" /db_xref="GeneID:6156760" CDS 891381..891971 /gene="aroQ" /locus_tag="CMS_0845" /old_locus_tag="CMS0845" /EC_number="5.4.99.5" /codon_start=1 /transl_table=11 /product="monofunctional chorismate mutase precursor" /protein_id="YP_001709601.1" /db_xref="GI:170781269" /db_xref="GeneID:6156760" /translation="MPRRALVATSAFAVTLAAVLAAAAPAQACPRDPAEQQAVTAVAS AALDRLEIADDVAASKYLSGKAVEDPAREQAVVDATIAAAKADGVDPVAAERIIRAQI TASKQVQNALIARWRAHPDEAPTTAPDLTTSVRPRINAVDARLVPAIGAAATALDDQA CGHLVTDARGQLGQGLDDAHRKAFRTALATVCTPES" sig_peptide 891381..891458 /gene="aroQ" /locus_tag="CMS_0845" /old_locus_tag="CMS0845" /note="Signal peptide predicted for CMS0845 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.494 between residues 26 and 27" misc_feature 891393..891452 /gene="aroQ" /locus_tag="CMS_0845" /old_locus_tag="CMS0845" /note="1 probable transmembrane helix predicted for CMS0845 by TMHMM2.0 at aa 5-24" misc_feature 891489..891716 /gene="aroQ" /locus_tag="CMS_0845" /old_locus_tag="CMS0845" /inference="protein motif:HMMPfam:PF01817" /note="HMMPfam hit to PF01817, Chorismate mutase, score 7.5e-05" gene complement(892137..892475) /locus_tag="CMS_0846" /old_locus_tag="CMS0846" /db_xref="GeneID:6158611" CDS complement(892137..892475) /locus_tag="CMS_0846" /old_locus_tag="CMS0846" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709602.1" /db_xref="GI:170781270" /db_xref="GeneID:6158611" /translation="MLLRTVILFALAAVAEIGGAWLIWQAVREGRPFWWAGLGVMALG AYGFIATLQADASFGRILAAYGGVFVAGSLLWGTVVDGYRPDRWDVIGAVVCLVGVAV IMAAPRGQGA" misc_feature complement(892149..892472) /locus_tag="CMS_0846" /old_locus_tag="CMS0846" /inference="protein motif:HMMPfam:PF02694" /note="HMMPfam hit to PF02694, Protein of unknown function UPF0060, score 1.7e-59" misc_feature complement(order(892155..892208,892236..892295, 892314..892382,892395..892463)) /locus_tag="CMS_0846" /old_locus_tag="CMS0846" /note="4 probable transmembrane helices predicted for CMS0846 by TMHMM2.0 at aa 5-27, 32-54, 61-80 and 90-107" gene complement(892534..893025) /locus_tag="CMS_0847" /old_locus_tag="CMS0847" /db_xref="GeneID:6156761" CDS complement(892534..893025) /locus_tag="CMS_0847" /old_locus_tag="CMS0847" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709603.1" /db_xref="GI:170781271" /db_xref="GeneID:6156761" /translation="MLPLTESDIRASLVNASQREKRDLHLPDGFAELRWDRLDFLGWR DPKAPQRGIVVVPVGDELIGVLLQQSATAPRSRAQCTWCQDVRLPNPVGFYAARRAGA AGRNGNTVGTLVCTDFECSANVRKPRPIPYLGFDPEAATAQLIDDLRTRVAAFASDIA STA" gene complement(893260..893709) /locus_tag="CMS_0848" /old_locus_tag="CMS0848" /db_xref="GeneID:6156762" CDS complement(893260..893709) /locus_tag="CMS_0848" /old_locus_tag="CMS0848" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709604.1" /db_xref="GI:170781272" /db_xref="GeneID:6156762" /translation="MQTFLPYPDLAESMAVLDDKRLGKQRVETLQVMKAVTVAGYGWQ SHPVTRMWRGYRPALMEYQEATCAEWTRRGFADTCFEKTLAVIAEVSEDLAAYTEGRI ELPPWWGRAELHLSHRSKLLAKAPELYRPAFPGVPDDLDYVWPGASA" gene 893814..894422 /locus_tag="CMS_0849" /old_locus_tag="CMS0849" /db_xref="GeneID:6156763" CDS 893814..894422 /locus_tag="CMS_0849" /old_locus_tag="CMS0849" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709605.1" /db_xref="GI:170781273" /db_xref="GeneID:6156763" /translation="MLGPVDRLDPPARRILLGAPSGAGKTTLARRVQERTGIPHTEMD ALFHGPAWTELPTFRDDVEAFSSRDAWVTEWQYTTQLGQLLPSRADTLVWLDLPVAVQ MGRLIRRTVVRRWRREPLWHGNVEPPMRTVLTDPNHIVRWGWRGRVKVRKRVVLAAVE HPHLRIVRLRSTREVDVWLRGLPGADQPTRPGQPPVPPAASG" misc_feature 893868..893891 /locus_tag="CMS_0849" /old_locus_tag="CMS0849" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(894389..894856) /locus_tag="CMS_0850" /old_locus_tag="CMS0850" /db_xref="GeneID:6156764" CDS complement(894389..894856) /locus_tag="CMS_0850" /old_locus_tag="CMS0850" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709606.1" /db_xref="GI:170781274" /db_xref="GeneID:6156764" /translation="MRGARRGRARRGGSAGRAADGRPDADADASAAALEAVNASIAAH DGPYPGLQLDGLETRWDEEQQVWTLAGMVGPMGEDPEPEEWSDRRVALWATDQDPTRE DFAGTLWSAVNGADMVSAAPLLESFPPLTMDGPDPAGLWCSDLYPEAAGGTGG" gene complement(894942..895880) /locus_tag="CMS_0851" /old_locus_tag="CMS0851" /db_xref="GeneID:6156765" CDS complement(894942..895880) /locus_tag="CMS_0851" /old_locus_tag="CMS0851" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709607.1" /db_xref="GI:170781275" /db_xref="GeneID:6156765" /translation="MTVAAAAGFVLAWSSGFLIAAVGTVEVPAVTLLLWRFAPLALVL VGLVVATGAARGIPLRMLGRQALIGAFAQLGYCAFVYAAIGAGIATGTTALIDAVQPL VVATLVGPLLGLRVRGAQWAGLALGAVGVVLVVRSQAGAADADPVAYLLPAAAMACLV AGTFLERRSHGRPPVLVTLTVHVVVTTVALVVAAVATGTLAPPADPAFWITTVTAALV PTLGAYGLYWWLLERVGITALNALLFLVAPTTAAAGALLLGERITPVTLAGFVLCGAG VAAVLVTEARRAPAAPAPADHPSPGADDREPAAVAA" sig_peptide complement(894942..895022) /locus_tag="CMS_0851" /old_locus_tag="CMS0851" /note="Signal peptide predicted for CMS0851 by SignalP 2.0 HMM (Signal peptide probability 0.978) with cleavage site probability 0.495 between residues 27 and 28" misc_feature complement(order(895038..895097,895107..895175, 895194..895262,895290..895358,895383..895451, 895461..895520,895539..895607,895617..895685, 895704..895772,895800..895868)) /locus_tag="CMS_0851" /old_locus_tag="CMS0851" /note="10 probable transmembrane helices predicted for CMS0851 by TMHMM2.0 at aa 5-27, 37-59, 66-88, 92-114,121-140, 144-166, 175-197, 207-229, 236-258 and 262-281" gene 896046..896564 /locus_tag="CMS_0852" /old_locus_tag="CMS0852" /db_xref="GeneID:6156766" CDS 896046..896564 /locus_tag="CMS_0852" /old_locus_tag="CMS0852" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001709608.1" /db_xref="GI:170781276" /db_xref="GeneID:6156766" /translation="MVGVDAIASAAGVTKKTIYDRFGAKEQLVVAYLQHRDARWREHL AARLARTPEPGTDRVLAVFDAAITWADANTPKGCSAINARAELGAGDLGDEDDGHDVL PEVMRQKAWLLELLRELCREAGIADPAATARTLMLVYEGGLVTLGMGTFAHPMAVARD AARSLLEASARP" gene 896620..897069 /locus_tag="CMS_0853" /old_locus_tag="CMS0853" /db_xref="GeneID:6156767" CDS 896620..897069 /locus_tag="CMS_0853" /old_locus_tag="CMS0853" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709609.1" /db_xref="GI:170781277" /db_xref="GeneID:6156767" /translation="MPDPSPCPFCALLRDEPLVAPLRQDVVAERERAVAVIAPRWWPR NRGHALVIPRVHVRDLYSVAPADLHAVMDLVQEVAVAMRASYDCAGISIRQHDETAGG QDVWHLHVHVFPRAEGDDLYGSAPLPGFATPEERLPYVRLLRDALAA" misc_feature 896638..896973 /locus_tag="CMS_0853" /old_locus_tag="CMS0853" /inference="protein motif:HMMPfam:PF01230" /note="HMMPfam hit to PF01230, Histidine triad (HIT) protein, score 9.5e-09" gene 897172..897525 /locus_tag="CMS_0854" /old_locus_tag="CMS0854" /db_xref="GeneID:6156768" CDS 897172..897525 /locus_tag="CMS_0854" /old_locus_tag="CMS0854" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709610.1" /db_xref="GI:170781278" /db_xref="GeneID:6156768" /translation="MTWTLAAEIPVPADVHELLVEGEQAVASFRTFRDSATFTTKRLI VRDAQGITGKKVELYSLPYSSINMWSTENAGTFDLDAELELWTRAGHIKVKLGKGADI RRIDGLIAWAVLHAH" gene complement(897662..898354) /locus_tag="CMS_0855" /old_locus_tag="CMS0855" /db_xref="GeneID:6156769" CDS complement(897662..898354) /locus_tag="CMS_0855" /old_locus_tag="CMS0855" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709611.1" /db_xref="GI:170781279" /db_xref="GeneID:6156769" /translation="MQKKTKIIVGTSAAVVVVLGVSAAAFDPAFYRDVIVGAPAAAPS VSAAPADSTLDTSNLSGEWQIGTGSTAGYRVAEVLNGTDVTVVGKTEDVTGSITVDGS TLSAATVKVDVASIATDAAPRDEYFRSTAMEVSKYPDATFTLTQPVDAAVPASGQVAT VDATGELTMHGVTQTVTVPLQAALTDDGVQVSGSIPVTFSDYGVEAPSLGFVSVQPQG TVEFLVKATPAK" gene complement(898451..899425) /locus_tag="CMS_0856" /old_locus_tag="CMS0856" /db_xref="GeneID:6156770" CDS complement(898451..899425) /locus_tag="CMS_0856" /old_locus_tag="CMS0856" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001709612.1" /db_xref="GI:170781280" /db_xref="GeneID:6156770" /translation="MRDASERLLRLLALLQRHRTWNAEQLAAELRVTDRTIRRDVGRL RALGYPVTSATGVDGGYELAAGASLPPLTLDPVEAVAVFVALRDASAAGDAEHSAAAR RALDKVVRVLPEQARAAVGAMSHHSTAVDIGHAIGPVDEPASATTLEVLARACRTRRQ VTCDYERGDGRRGPMVLEPRHLVRTMDRWYLLAYVTGAESWRTLRVDRMGDVAATTVP SRPRADPADDLDALVVDGIRSRMQRVTGVVRVHAPASEIAHWISPAWGTVTAEGPDSC LVAGGADSHGSMARWLLLLDRPLTVIGPPELAAAFVAVAAEAANLAGT" misc_feature complement(899300..899365) /locus_tag="CMS_0856" /old_locus_tag="CMS0856" /note="Predicted helix-turn-helix motif with score 1198.000, SD 3.27 at aa 21-42, sequence WNAEQLAAELRVTDRTIRRDVG" misc_feature complement(899303..899407) /locus_tag="CMS_0856" /old_locus_tag="CMS0856" /note="PS00894 Bacterial regulatory proteins, deoR family signature." gene 899566..900549 /locus_tag="CMS_0857" /old_locus_tag="CMS0857" /db_xref="GeneID:6156771" CDS 899566..900549 /locus_tag="CMS_0857" /old_locus_tag="CMS0857" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709613.1" /db_xref="GI:170781281" /db_xref="GeneID:6156771" /translation="MLARHRGDHREAPSSCVALREVPVLPLPDGEVRVRTDSMQVTAV MADLMSPAPGLPMPAYERDRPLWGGATGTVVESASDMPVGTVVTHMSGWREEVVGSAG SFWPVPVDRLPGAEHVLNQGVTAFHGMVDVARVGDGDVVFVTGAAGGVGSLAGQIARA RGASTVIGSTGSAAKAAWLVDELGFDAAIDHRREDVLARLRELAPDGIDVLFDTVAGP QFEAAVQAAAPGARFALCGALAGQIDGGQGGMPRLDVMTAIVKQLEIRPFSTHHTAEQ IRAWDEHYARWLWEGRIVFPHTIVEGGIAAAPGALDGLLRGEFRGNVIVRM" misc_feature 899599..900546 /locus_tag="CMS_0857" /old_locus_tag="CMS0857" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 2e-17" gene 900678..901184 /locus_tag="CMS_0858" /old_locus_tag="CMS0858" /db_xref="GeneID:6156772" CDS 900678..901184 /locus_tag="CMS_0858" /old_locus_tag="CMS0858" /codon_start=1 /transl_table=11 /product="putative RNA polymerase sigma factor" /protein_id="YP_001709614.1" /db_xref="GI:170781282" /db_xref="GeneID:6156772" /translation="MTTESTARMRALHDAHAPALQRYALRLTGDPALAEDVVQEALLR AWRSPAILAEDDESARRWLFTVVRNLVIDDRRSAWRGRETPTDTLPEDPVADASDAII DRLLVAEALASLSAEHRRAVVSCYHLGRSVAETAEREGVPPGTIKSRLHYALKALRLA LQERGVTR" misc_feature 900711..900920 /locus_tag="CMS_0858" /old_locus_tag="CMS0858" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 1.2e-19" misc_feature 901005..901154 /locus_tag="CMS_0858" /old_locus_tag="CMS0858" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 4.3e-12" misc_feature 901065..901130 /locus_tag="CMS_0858" /old_locus_tag="CMS0858" /note="Predicted helix-turn-helix motif with score 1287.000, SD 3.57 at aa 130-151, sequence RSVAETAEREGVPPGTIKSRLH" gene 901181..901978 /locus_tag="CMS_0859" /old_locus_tag="CMS0859" /db_xref="GeneID:6156773" CDS 901181..901978 /locus_tag="CMS_0859" /old_locus_tag="CMS0859" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709615.1" /db_xref="GI:170781283" /db_xref="GeneID:6156773" /translation="MNDRADDIHEWDAAYVLGSLSATDRALFEAHLEGCDACMRSLAE LSGLPGVLRMLPVDEAIALMDEPEAPAVPQPAPEPRERPSAAAGHRVPRRRRRPLSAP ARLPVSRRTGGWILVAAALVLLVGGAGLGSALRAGVSAPVADPAPSVTSPSADPSSST GLPADAVSMRSELDEGVTAQLAVTAKPWGTRFDWSCAYAGGGARKGAYDLVAIADDGT RTIVATWGAGQAEATQLAATSSLPIERIREVQITPSDSDVVLASRDL" misc_feature 901514..901582 /locus_tag="CMS_0859" /old_locus_tag="CMS0859" /note="1 probable transmembrane helix predicted for CMS0859 by TMHMM2.0 at aa 112-134" gene 902020..902595 /locus_tag="CMS_0860" /old_locus_tag="CMS0860" /db_xref="GeneID:6156774" CDS 902020..902595 /locus_tag="CMS_0860" /old_locus_tag="CMS0860" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709616.1" /db_xref="GI:170781284" /db_xref="GeneID:6156774" /translation="MSIGELVHAARRSRGYTQRQLSGRSGVAQSTLSELESGRRSPSA ETVDRLLLATGHQLISIPTRRQTAASATAEIASRLAEGDRELAVRHFIQLADDLAAVH HEVRFALTIAEPARTGEKRWDAAVAGLVEHRLEEEGLPLPSWVSSDERRLRRSWIFGD GVYDLPVDPERAVPAFRRHGVLLDPATLASV" misc_feature 902038..902202 /locus_tag="CMS_0860" /old_locus_tag="CMS0860" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 1.1e-12" misc_feature 902065..902130 /locus_tag="CMS_0860" /old_locus_tag="CMS0860" /note="Predicted helix-turn-helix motif with score 1362.000, SD 3.83 at aa 16-37, sequence YTQRQLSGRSGVAQSTLSELES" gene 902622..903161 /locus_tag="CMS_0861" /old_locus_tag="CMS0861" /db_xref="GeneID:6156775" CDS 902622..903161 /locus_tag="CMS_0861" /old_locus_tag="CMS0861" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709617.1" /db_xref="GI:170781285" /db_xref="GeneID:6156775" /translation="MAALSELIAALRLRGVTGRMQIFGGAALTLCHFDRGTTVDIDAR LRFDGDVQESVTLIAERRGWGSDWLNDDGAFFIPAYGRDVEWIEIFVGEGLVVEIASA EALLAMKLHAGRPGRDGRDISRLMVICGLSSLSELEDLHEAYYPGDDLSAQAEKLILR ILDVGLPERPDTPPPPVVG" gene 903283..904623 /locus_tag="CMS_0862" /old_locus_tag="CMS0862" /db_xref="GeneID:6156776" CDS 903283..904623 /locus_tag="CMS_0862" /old_locus_tag="CMS0862" /codon_start=1 /transl_table=11 /product="putative multidrug efflux protein" /protein_id="YP_001709618.1" /db_xref="GI:170781286" /db_xref="GeneID:6156776" /translation="MPDVPAMSDADAAVVAARWKRNATLFLSGQTVSLFGSMLVQYAV MWYVTFETRSGLAIALYAVCAFLPQGIVSIFGGTLADRMNRRVLVIVSDSTIAIVTVA LALLMMNGVTDLWIILLAVAVRSVGAGFQTPAVQAMIPQIVPPEQLLRINGIFGTIQS AMALLAPAAAGAVYAAYGLVPLFFVDAITAAIGIAFLLSVAVPTLASIADKTSTYRED LVEGIRYIGGNPVVRWLLVLFAIIFLLTVAPSFITPLLVARTYGTEVWMVTVLEIAFS VGMLGGGALVSTLFAKSDRMTLILVSCFGFAIFTAGLGLSPNLWVFYGFMFAIGLFVP LFSAPFMTLVQETVAPEMHGRVFSYVGIVMALATPIGAVAFGPLADVFSVQTLLVAAG IITVVVITVAISLPSGRAAIRIAREKKVEADAVETAVSDASPTVEDPPRTTPVA" misc_feature 903325..904617 /locus_tag="CMS_0862" /old_locus_tag="CMS0862" /inference="protein motif:HMMPfam:PF05977" /note="HMMPfam hit to PF05977, Bacterial protein of unknown function DUF894, score 4.4e-05" misc_feature order(903358..903426,903454..903522,903541..903600, 903613..903666,903763..903831,903841..903909, 903970..904038,904081..904149,904168..904227, 904237..904305,904342..904410,904438..904506) /locus_tag="CMS_0862" /old_locus_tag="CMS0862" /note="12 probable transmembrane helices predicted for CMS0862 by TMHMM2.0 at aa 26-48, 58-80, 87-106, 111-128,161-183, 187-209, 230-252, 267-289, 296-315, 319-341,354-376 and 386-408" misc_feature 903358..904422 /locus_tag="CMS_0862" /old_locus_tag="CMS0862" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(904830..905720) /locus_tag="CMS_0863" /old_locus_tag="CMS0863" /db_xref="GeneID:6156777" CDS complement(904830..905720) /locus_tag="CMS_0863" /old_locus_tag="CMS0863" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709619.1" /db_xref="GI:170781287" /db_xref="GeneID:6156777" /translation="MKRNRIAIASFLSAAALAMTVATPAHAATATFFDGSAAPDVIYT EGTVYQSRTGITAGFTEETITGLANIQVWLGTATTNAWSYQATIYDTRNYRKGAFRWK SPGETASLNARATALDVGRIRSDALNDSTAAEGRIEESAVPNRALAHVASASGFSKDD LVAIGQFEGVQLWKASNASDTFLFTTGDSENDYVTSARASNSSFSQRAISVRNSIPEA DGAVQTHQFVLTDDAHEADIASVEGLRNIGHDLFVDTRADERTEDQITTFGTEGAVTT SEVGEAREPHTYALALSGTQ" sig_peptide complement(904830..904910) /locus_tag="CMS_0863" /old_locus_tag="CMS0863" /note="Signal peptide predicted for CMS0863 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 between residues 27 and 28" misc_feature complement(905634..905702) /locus_tag="CMS_0863" /old_locus_tag="CMS0863" /note="1 probable transmembrane helix predicted for CMS0863 by TMHMM2.0 at aa 7-29" gene 905852..906169 /locus_tag="CMS_0864" /old_locus_tag="CMS0864" /db_xref="GeneID:6156778" CDS 905852..906169 /locus_tag="CMS_0864" /old_locus_tag="CMS0864" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709620.1" /db_xref="GI:170781288" /db_xref="GeneID:6156778" /translation="MVSEKMAACGARAISSQDEIPKRRVRVISVHAESGSGLRSDDMM GFNARLTAALAEAQARRQRAESDRAPDHSRGDRPDAFDGHATPLPPYEKAARRRRWWQ RRL" gene 906214..906970 /locus_tag="CMS_0865" /old_locus_tag="CMS0865" /pseudo /db_xref="GeneID:6156779" misc_feature 906220..906705 /locus_tag="CMS_0865" /old_locus_tag="CMS0865" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 6.8e-13" /pseudo gene complement(906989..907483) /locus_tag="CMS_0866" /old_locus_tag="CMS0866" /db_xref="GeneID:6156780" CDS complement(906989..907483) /locus_tag="CMS_0866" /old_locus_tag="CMS0866" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709621.1" /db_xref="GI:170781289" /db_xref="GeneID:6156780" /translation="MDHDDWDARVAAFWAAADDERADETVAGMRALVAERPDGDPRGL FELACAHDYVGQEVEAVPLYRAALDGGLDPEHRPLAVIQLASSPRNVGEPAEAVALLE ALPDDDDAVGRDAFLALALHDAGRPTEALALALRRLAPTVPGYGRAIAAYADELAVRD HAEG" gene complement(907507..908526) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /db_xref="GeneID:6156781" CDS complement(907507..908526) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001709622.1" /db_xref="GI:170781290" /db_xref="GeneID:6156781" /translation="MRSMSRRPTIHDVAAAAGVSVSTVSKAVNGRYGISAETSRRVME VVERLGYESSLVASSMRSHRTGVIGVLVAGFEPFSAEILKGVGAALRASPYDLLAYSG SRQVDNTGWERRSLSRLSGTLIDGAIMVTPTVVTASTEIPVVSIDPHTGPADLPSVES DSLGGALQATRHLLELGHRRIGFLAGRPDLRSATLRETGYRRALQEAGIAFDPALVRS GFFLTAPAREPARALLSMSDRPTAIFAANDLSGIAILQVAAELGIRVPEDLSVIGFDD IPEASQITPSLTTIRQPMQRLGTTAVDLLMSLMAGTEPDAMRVQLPTRLVRRATTGPP PARSR" sig_peptide complement(907507..907584) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /note="Signal peptide predicted for CMS0867 by SignalP 2.0 HMM (Signal peptide probability 0.909) with cleavage site probability 0.447 between residues 26 and 27" misc_feature complement(907540..908334) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 9.5e-15" misc_feature complement(908428..908505) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 3.8e-09" misc_feature complement(908440..908505) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /note="Predicted helix-turn-helix motif with score 1875.000, SD 5.57 at aa 8-29, sequence PTIHDVAAAAGVSVSTVSKAVN" misc_feature complement(908443..908499) /locus_tag="CMS_0867" /old_locus_tag="CMS0867" /note="PS00356 Bacterial regulatory proteins, lacI family signature." gene 908741..910033 /locus_tag="CMS_0868" /old_locus_tag="CMS0868" /db_xref="GeneID:6156782" CDS 908741..910033 /locus_tag="CMS_0868" /old_locus_tag="CMS0868" /codon_start=1 /transl_table=11 /product="putative solute-binding transport protein" /protein_id="YP_001709623.1" /db_xref="GI:170781291" /db_xref="GeneID:6156782" /translation="MKARKILTGSAALLVGALALTGCSGSGSGSGDDGGPVEMTLWQN STTGPGKAFWEKVTADFNAANPGVTVTATSIQNEDLDGKLQTALNSGDAPDIFLQRGG GKLAATVAAGQIMDITDGISADVKGQISQGAFDANSIDGKAYAMPVAVLPSGIFYSQD LFTAAGITETPKTMDELDAAVDKLKATGVAPIALGAKDAWPAAHWYFNFALRECSSAT LEKAATDKDFSDDCWIKAGQDVEDLVGTNPFNDGFLTTAAQQGAGSSAGLIANKKAAM ELMGAWDPGVIAGLTPDQKPLADLSWFPFPEISGGKGEPGSIMGGIDGYSCSAQAPKQ CVDFLNYIGTADVQKEYYAAFNAPPVNTEAQTAVTEPYLKEILAAYNDAPYVSQWLDT VYGLNVGNAMNVGVVDLMAGDGSPEKLIQTVGDAAKKA" misc_feature 908858..909787 /locus_tag="CMS_0868" /old_locus_tag="CMS0868" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 3.7e-11" gene 910217..911035 /locus_tag="CMS_0869" /old_locus_tag="CMS0869" /db_xref="GeneID:6156783" CDS 910217..911035 /locus_tag="CMS_0869" /old_locus_tag="CMS0869" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709624.1" /db_xref="GI:170781292" /db_xref="GeneID:6156783" /translation="MGFVIYPVVMAAYYGFFSWQGFGPPTVFVGFRNYITILQDPTFH EALMHNAVIAILVALLLNRKLRGQSIIRVLIFVPYVISEVVVGTGWSLMLQGSGALNG FLANIGLADLQQDWLANPDIAIWSLMTIITWKYIGFAVILFLAGLQGIPEELSEAAAI DGASYWQIQRRITLPLLAPTLRIWAFLSIIGSLQLFDLVYIIWGQYISATAGTSTMAT YLVANGRGSGNYGYGNAVAVVLFLISLVVALIYQRFVLNRDTAGALTGAERKKK" misc_feature order(910220..910282,910340..910399,910433..910501, 910580..910648,910736..910804,910817..910885, 910904..910972) /locus_tag="CMS_0869" /old_locus_tag="CMS0869" /note="7 probable transmembrane helices predicted for CMS0869 by TMHMM2.0 at aa 2-22, 42-61, 73-95, 122-144,174-196, 201-223 and 230-252" misc_feature 910307..910996 /locus_tag="CMS_0869" /old_locus_tag="CMS0869" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.00033" gene 911032..911937 /locus_tag="CMS_0870" /old_locus_tag="CMS0870" /db_xref="GeneID:6156784" CDS 911032..911937 /locus_tag="CMS_0870" /old_locus_tag="CMS0870" /codon_start=1 /transl_table=11 /product="putative intgral membrane transport protein" /protein_id="YP_001709625.1" /db_xref="GI:170781293" /db_xref="GeneID:6156784" /translation="MSIVTAAPRNADLDPTYSTKTPKPKRAKVPGQGGNPIPYLVAVV LIALMLTPVAYIILGGFRTNAQITTDPAGFPSPFQIQNYLDVLGGSMFWRQVGNSLIA AIGTTVGAVVLGLMASYVLARYTFFGRGALYALFASGLMFPITVAITPLYIVIRSLGL TNSLPGIILPQIAFALPTTIIILVPFLRAIPDEIQEAAFIDGCSRIGFFFRMVVRLSM PGVITVGILAFIGSWNSYLLPLFLLSDASIYTLPLGVQSFSSQYSVDTAKVLAFTSLS MIPALIFFSIFERRIVGGLTGAVKG" misc_feature order(911137..911205,911326..911394,911428..911496, 911524..911592,911653..911721,911836..911892) /locus_tag="CMS_0870" /old_locus_tag="CMS0870" /note="6 probable transmembrane helices predicted for CMS0870 by TMHMM2.0 at aa 36-58, 99-121, 133-155, 165-187,208-230 and 269-287" misc_feature 911305..911922 /locus_tag="CMS_0870" /old_locus_tag="CMS0870" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.7e-12" misc_feature 911590..911676 /locus_tag="CMS_0870" /old_locus_tag="CMS0870" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 911934..914294 /locus_tag="CMS_0871" /old_locus_tag="CMS0871" /db_xref="GeneID:6156785" CDS 911934..914294 /locus_tag="CMS_0871" /old_locus_tag="CMS0871" /codon_start=1 /transl_table=11 /product="putative beta-xylosidase" /protein_id="YP_001709626.1" /db_xref="GI:170781294" /db_xref="GeneID:6156785" /translation="MTGAESSQPVVVALPEVSERVRELHARMTLEEKLAQIVGYWVDQ GGEVVAPMQGEMATTGRYEEATEHGLGHLTRVYGTRPVDPVERASWLWAEQRRLQKET RLGIPALVHEECLTGLAAWQAATFPTPLAWGASFDPGLVEEMAALIGGSMRELGVHQG LAPVLDVIRDARWGRVDECIAEDPYVVGTIGTAYAKGLQSAGIHATLKHFVGYSVSQS GRNHAPAHVGRRFVEDVLLPPFEMAVLDGGVRSVMNSYAEIDGAPVGATTEYLTDVLR GRWGFDGVVVSDYFSVAFLQVMHAVAGDRGEAAALALEAGIDVELPTGDAYLAPLAER IRAGLADESLVDRAVLRVLDEKEELGLLDATFEDPPMEIDLDTPAHRDVARRLAEESI VLLANDGTLPLAGGDRAAPGRIALIGPSADSAEALMGCYSFANHVLAHHPGTPLGFAI PTVAEALRAELPDAEVVFAHGADVEGDDRSGFDAAVEAARGSDLAVVVVGDRAGLFGR GTVGEGNDVESLELPGVQRELVEAVRATGTPVVVVLLTGRPYAVAWALEGDAAPAAVL QAFFPGEEGGSAIAGVLSGRVSPSGRLPVSLPRSAGAQPFSYLHPVLGGPSEVTSADP TPVLPFGHGLSYTTFERSDLRVDVAEVAAGESFTATVDVRNTGDRDGTDVVQLYARDV QGSVTRPVAQLLGYLRLDLAAGESARVTFRVPTTRLALTDLRYRRVVEPGAVELWVGP SSAVKETESAIAVVGSVHHVTIADERYVGTSVERVLADGEPHREVR" misc_feature 912225..912899 /locus_tag="CMS_0871" /old_locus_tag="CMS0871" /inference="protein motif:HMMPfam:PF00933" /note="HMMPfam hit to PF00933, Glycoside hydrolase, family 3, N-terminal, score 9.1e-68" misc_feature 913107..913847 /locus_tag="CMS_0871" /old_locus_tag="CMS0871" /inference="protein motif:HMMPfam:PF01915" /note="HMMPfam hit to PF01915, Glycoside hydrolase, family 3, C-terminal, score 1.5e-77" gene complement(914741..915145) /locus_tag="CMS_0872" /old_locus_tag="CMS0872" /db_xref="GeneID:6156786" CDS complement(914741..915145) /locus_tag="CMS_0872" /old_locus_tag="CMS0872" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709627.1" /db_xref="GI:170781295" /db_xref="GeneID:6156786" /translation="MPWVVPGLYQISQHRKRNRGRFTVFTITAYADDISLDLFGRLLG FEFFRRLFRFDSRIAHARFCRQRCIGDIPDVTHFLHDVIRGGRMRSGGSGVPINFLEK TSIGGPLAPIFGDLPPPFDTLTAVDRERYCHA" gene complement(915385..916242) /locus_tag="CMS_0873" /old_locus_tag="CMS0873" /db_xref="GeneID:6156787" CDS complement(915385..916242) /locus_tag="CMS_0873" /old_locus_tag="CMS0873" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709628.1" /db_xref="GI:170781296" /db_xref="GeneID:6156787" /translation="MTEFASILRSWRERVQPADVGLPQGSHRRTAGLRREELAALAGV SVDYVVRLEQGRSVNPSPQMLGALARALRLSEDERDHLHRVAGVAPPGRGEVPRHIPP GVHRIIDRLGDVPMAVFTATHDMLLWNPLWAALNGDPSTRTGWDRNLVWTYFTQGHAG TDFDAAHEEEFARDLAADLRTAVGRYPADRSLARLVARLRAEVPEFERRWSEARVAEH RSSRKTVTSTPVGPITIDCDTLSVPGSDLRIVVYTAEPGSTDEARLDLLRVTGLQAMT TAPVEAAGT" misc_feature complement(916006..916173) /locus_tag="CMS_0873" /old_locus_tag="CMS0873" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 6.8e-08" misc_feature complement(916081..916146) /locus_tag="CMS_0873" /old_locus_tag="CMS0873" /note="Predicted helix-turn-helix motif with score 1410.000, SD 3.99 at aa 33-54, sequence LRREELAALAGVSVDYVVRLEQ" gene 916344..917024 /locus_tag="CMS_0874" /old_locus_tag="CMS0874" /db_xref="GeneID:6156788" CDS 916344..917024 /locus_tag="CMS_0874" /old_locus_tag="CMS0874" /codon_start=1 /transl_table=11 /product="putative short chain oxidoreductase" /protein_id="YP_001709629.1" /db_xref="GI:170781297" /db_xref="GeneID:6156788" /translation="MTTTLITGSNRSLGLETARRLIEAGHTVYAGMRDTADGDAARAL GAHPVQLDVDDQASVDRALASLPALDVLVNNAGILGDSQGVDDLTPEAMLAVLQTNVV AVVRVTQAALPLLRESAAPVIVNVSSGVGWPRALAGYGTDESHVMTIPYATSKAALIT ATVQYAKNLPGFRVNATDPGYTATDFNGNTGHQTVTEGTDATVAMALVGPDGPTGEFH SRHGRIEY" misc_feature 916803..916850 /locus_tag="CMS_0874" /old_locus_tag="CMS0874" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene 917085..917483 /locus_tag="CMS_0875" /old_locus_tag="CMS0875" /db_xref="GeneID:6156789" CDS 917085..917483 /locus_tag="CMS_0875" /old_locus_tag="CMS0875" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709630.1" /db_xref="GI:170781298" /db_xref="GeneID:6156789" /translation="MTWPALHITRSVDADVASVVAVAGDPARLPEWAAGVSSGIRLEG GRWLSDSPMGTVEIAFAGPRELGILDHDVTLPDGTVVRNPLRVLPNVDGSEVVFTLFR RPGMTDVALAEDAALVAEDLDRLAALVARG" gene 917517..918083 /locus_tag="CMS_0876" /old_locus_tag="CMS0876" /db_xref="GeneID:6156790" CDS 917517..918083 /locus_tag="CMS_0876" /old_locus_tag="CMS0876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709631.1" /db_xref="GI:170781299" /db_xref="GeneID:6156790" /translation="MPSARLAAPEDRTARLDLHRPTVADAAEVHAILSDPAVWTHYPS LRVTDPAQTDRFLRARVEGWERDGLGTWTVRERDARAVVGFGGCSIAHDAFWNLGYRF SPTVHGRGYATEMATRAIERAWIHRPELPVVAYLVAHNHASAAVAERAGLTLSHRGPD PGNPDPAVMRLVYADRALTDEERDATMR" misc_feature 917736..917975 /locus_tag="CMS_0876" /old_locus_tag="CMS0876" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 0.0042" gene complement(918049..918348) /locus_tag="CMS_0877" /old_locus_tag="CMS0877" /db_xref="GeneID:6156791" CDS complement(918049..918348) /locus_tag="CMS_0877" /old_locus_tag="CMS0877" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709632.1" /db_xref="GI:170781300" /db_xref="GeneID:6156791" /translation="MRLGTRITIGVLSGELVVMAALLLLADRWVDMGWPALGMEHPLI GLGFLMPPLIVVTAVALVLLAGTRILVAEVGAWRRRRAEPVAARISASSRPAPRR" misc_feature complement(order(918136..918204,918262..918330)) /locus_tag="CMS_0877" /old_locus_tag="CMS0877" /note="2 probable transmembrane helices predicted for CMS0877 by TMHMM2.0 at aa 7-29 and 49-71" gene 918462..919355 /locus_tag="CMS_0878" /old_locus_tag="CMS0878" /db_xref="GeneID:6156792" CDS 918462..919355 /locus_tag="CMS_0878" /old_locus_tag="CMS0878" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709633.1" /db_xref="GI:170781301" /db_xref="GeneID:6156792" /translation="MSTAADALARLVEGIDRERLGAYGVVVRVGADEVAHRWRSDDRE NLYSVSKGVCALAIGIAVDEGILAPDTRVPELLPALDLGAGVDQVTVEHLLTMTSGID FAWFGDEPVPGPDLAQAMLSGPSRGRVFQYSDASPYVAMRMLAAAVGDVRDWLLPRLF ESLGIDNPQWHRCPLGFIVGGSGLELRTGELARIGRLLRDRGAWEGRQLVSQEWVDRM HGSWVATGADPAAPFARYGLATWDGPGDAWRLDGRYGQYVLVDGSRDAVVTITAHEEE RDHLLAELAAAAVADAAPVVG" misc_feature 918483..919334 /locus_tag="CMS_0878" /old_locus_tag="CMS0878" /inference="protein motif:HMMPfam:PF00144" /note="HMMPfam hit to PF00144, Beta-lactamase, score 5.9e-15" gene 919429..920670 /locus_tag="CMS_0879" /old_locus_tag="CMS0879" /db_xref="GeneID:6156793" CDS 919429..920670 /locus_tag="CMS_0879" /old_locus_tag="CMS0879" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709634.1" /db_xref="GI:170781302" /db_xref="GeneID:6156793" /translation="MRDATDNPFSPGSDTVPEIWAGRIEQLGDWRDVVRPRLLRGLPE RGRTVLGEPGLGKSALVRRIAWSADRDGDWVTPQLRIPLGTDPLKPVAAAVLELAQAA GLSSLREKRIKEAIARVESVAAAGLSLTMRGGSDQDGPEPHAALTALLVEVGRAAMRH EKVALVHVDEVQNIRDERTLSQLLIALGDAITHEEEVPIPGGARVRRSLPIAVYLTGL PDFEDRAGAHKGATFARRFRTTILTAIDDEDIRAALQDFVMPGWEVADDSGRTRLIRM DQDAAAAIVDLCRGEPFLFQLAGERAWYAGSGTTITRAEVHAGWRGAEREATAHVERI LERLSPRERAFVEAMAALPAEERTLTRIAKEMGRSRAAEVGTTAQRLDTVRGIIDRGT SYGFRHRAIEAHLTSDWPRVG" misc_feature 919579..919602 /locus_tag="CMS_0879" /old_locus_tag="CMS0879" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(920695..921227) /locus_tag="CMS_0880" /old_locus_tag="CMS0880" /pseudo /db_xref="GeneID:6156794" gene 921400..922941 /gene="abfA" /locus_tag="CMS_0881" /old_locus_tag="CMS0881" /db_xref="GeneID:6156795" CDS 921400..922941 /gene="abfA" /locus_tag="CMS_0881" /old_locus_tag="CMS0881" /EC_number="3.2.1.55" /codon_start=1 /transl_table=11 /product="alpha-N-arabinofuranosidase" /protein_id="YP_001709635.1" /db_xref="GI:170781303" /db_xref="GeneID:6156795" /translation="MTDARPTADARTAPDARIAIDRTAVVAPVNRRTFGSFVEHLGRC VYDGIYEPGHPTATADGFRGDVVDLVKELGTGAIRYPGGNFVSGYRWEDGVGPREDRP KRLDLAWHSLETNEVGLDEFARWCELTGSELMMAVNLGTRGVLEALDILEYSNHPGGT ALSDQRIANGSPEPHNVKMWCLGNEMDGPWQVGHMTADDYGKLANRTAGAMKMVDPTL ELVACGSSGSGMPTFGEWERTVLEHAYDNVDFISAHAYYQERKGDLGSFLASSLDMEY FIRTVVASADQVKYRRKSDKTINISFDEWNVWYLDEHQESGVITEGWPYAPHLLEDVY SVADAVVLGNLMITLLKHSDRVTSASLAQLVNVIAPIMTEKGGDAWRQTTFFPFSVTS RLAQGEVLRPRIDVGTYETEVHGTAPLVDSVATFDETTGRAAVFLVNRSLAEALTIEV DVAGLAVSEVLEAVGIHDEDVYAKNTFEDRERVGLTPNASATLADGTLTITLPPVSWT AVSLG" misc_feature 922306..922917 /gene="abfA" /locus_tag="CMS_0881" /old_locus_tag="CMS0881" /inference="protein motif:HMMPfam:PF06964" /note="HMMPfam hit to PF06964,Alpha-L-arabinofuranosidase, C-terminal, score 6.5e-73" gene complement(923009..923383) /locus_tag="CMS_0882" /old_locus_tag="CMS0882" /db_xref="GeneID:6158585" CDS complement(923009..923383) /locus_tag="CMS_0882" /old_locus_tag="CMS0882" /codon_start=1 /transl_table=11 /product="putative Lsr2-like protein" /protein_id="YP_001709636.1" /db_xref="GI:170781304" /db_xref="GeneID:6158585" /translation="MTDDVDPRDDDERGGAAGGATPDATETVRFGLDGVVHEIDLAPA DARALHAALAPYVAAGRHTTVTITPIHDEPARAAGVTAGTAPTGERAAARAWLEANGH KLGPGGRISATLMTLYRGRDGR" misc_feature complement(923129..923164) /locus_tag="CMS_0882" /old_locus_tag="CMS0882" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene 923483..924556 /locus_tag="CMS_0883" /old_locus_tag="CMS0883" /db_xref="GeneID:6156796" CDS 923483..924556 /locus_tag="CMS_0883" /old_locus_tag="CMS0883" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709637.1" /db_xref="GI:170781305" /db_xref="GeneID:6156796" /translation="MDPHRDARPSVVRGGLAVTLVSASDLGAASRVAAAAVGAPASAP PAVVEAPGGDSGDLGAGLAEGLIADADDGRRGLAVVALEPAADPLEVALVLEHVVEAR HPGATPIGILDVVAVSSVAEIRDLLLDPGDADATPFDAAERLAGRLECASVVVLDDLD PDRPTADARRAVALLAHLAPDARVVATADRDSLAPAPLRIGRGRARGLAAGTGWQVAL AGEAAATSAGGMGVHVFRDPRPFHPGRLHAAVAHDLVPGPVGRIVRSRGLVRLATRPA TVGSWATAGDVLSLDPTAMRSWDADSPAGQEIAFVGEHLDGALLDGILGACLLAPAEL VAGPDAWHGYADPFPVWDTEHRH" misc_feature 924170..924466 /locus_tag="CMS_0883" /old_locus_tag="CMS0883" /inference="protein motif:HMMPfam:PF07683" /note="HMMPfam hit to PF07683, Cobalamin synthesis protein cobW C-terminal domain, score 1.5e-10" gene 924789..926135 /locus_tag="CMS_0884" /old_locus_tag="CMS0884" /db_xref="GeneID:6156797" CDS 925134..926135 /locus_tag="CMS_0884" /old_locus_tag="CMS0884" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709638.1" /db_xref="GI:170781306" /db_xref="GeneID:6156797" /translation="MDITQRIEGQQKWDAVVIGGGVAGSSAALMLARARRSVLVVDAG QPRNAVAAHMHGVLGHDGKPPRQLIAEGRREIEGYGGVVVDGRVERVAALEDPAGPRF RVTLDGGAEVTARRVILAAGLADVLPEVPGLAAHWGAGVVVCPYCDGYEVRDRRIGVL ATGPGSLHHVQMLRQWSADITFLVAGGTADGAPLEIDAATRAGIDARGIRVEEAAAVR VLGERGALEGVELADGRILELDSLFAMPGVAPRDGFARALGAATEETPWGPFVAADPT GQTSVPGLLIAGNASSGSANVPVAMAAGTMAGAMANAGMVTEDVAIAVAAAPAAVAR" gene 926201..928393 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /db_xref="GeneID:6156798" CDS 926201..928393 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /codon_start=1 /transl_table=11 /product="putative ATP-dependent protease ATP-binding subunit" /protein_id="YP_001709639.1" /db_xref="GI:170781307" /db_xref="GeneID:6156798" /translation="MANMQGAPATDENAKTALEQYGVNLTEIAKSGKLDPVIGRDAEI RRISQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVADSLKGKQLVSLDLAAL VAGAKYRGEFEERLKAVLKEIDDADGEIITFVDELHTLMGAGGGEGSVAASNMLKPML ARGELRLIGATTLDEYRQYIEKDAALERRFQQVYVGEPSVEDTIAILRGLKGRYEAHH QVPITDAALVAAASLSNRYIPARQLPDKAIDLIDEAASRLRMEIDSSPVEIDELRRAV DRMRLEELALKREKDEASKARLAKLREDVAAREQTLGELQRRWEAERASVNRVGKLKD ELNELRIRAERAQREGNLEKASRLLYGEIPVIEREVAQAEAAESVPSAEDRMVNEQVT AEDVAAVVAAWTGIPVGRLLQGETEKLLHLEQELGKRLIGQKQAVRAVADAVRRTRAG ISDPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDEKAMVRIDMSEYGEKFAVSRLVG APPGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLTDGQGRT VDFRNVILVLTSNLGSQFISDATLPLDQREQAVQQLVRQTFKPEFVNRLDDIVVFQTL SMDDLAQIVELYIDRLGVRLSDRRLALGVTPDARRWLAERGHDPLYGARPLRRLMQRE IDDRLARELLAGDIRDGDAVRVDLAPDGDGLTVARAWSDEPEDAAPGA" misc_feature 926372..926956 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 1.1e-11" misc_feature 926387..926410 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 927566..928054 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /inference="protein motif:HMMPfam:PF07724" /note="HMMPfam hit to PF07724, ATPase family associated with various cellular activities (AAA), score 3.2e-106" misc_feature 927578..928138 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 9.3e-05" misc_feature 927593..927616 /locus_tag="CMS_0885" /old_locus_tag="CMS0885" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(928436..929080) /locus_tag="CMS_0886" /old_locus_tag="CMS0886" /db_xref="GeneID:6156799" CDS complement(928436..929080) /locus_tag="CMS_0886" /old_locus_tag="CMS0886" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001709640.1" /db_xref="GI:170781308" /db_xref="GeneID:6156799" /translation="MAIITLTGVTKGFRGVTLFEGVDLALERGRTYGLVGPNGCGKSV LFKLICGFLRPDAGVIDIDPALLSPGRTFPDRFGAIIDGPAYLAHRTGLQNLTELAAI RKRITVDEVRDAMRAMGLDPDSRTRVRSYSIGMKQKLSLAQALMERPEVLLLDEPYNA LDAESVERLTEELHRQNAIGTTILFTSHEREHIDALSDEVLEISGGRIRPAARH" misc_feature complement(928463..928996) /locus_tag="CMS_0886" /old_locus_tag="CMS0886" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.1e-47" misc_feature complement(928952..928975) /locus_tag="CMS_0886" /old_locus_tag="CMS0886" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(929099..929791) /locus_tag="CMS_0887" /old_locus_tag="CMS0887" /db_xref="GeneID:6156800" CDS complement(929099..929791) /locus_tag="CMS_0887" /old_locus_tag="CMS0887" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709641.1" /db_xref="GI:170781309" /db_xref="GeneID:6156800" /translation="MRAWIVLAVAAIGALTGLMLLPADPSLGSSAADRLADALSGDGT ILRCLGGLIVYGGFAFVVQLRESEESGGVAYQRLLRHGSPARWARSRTAHHVRAAAAY LATIAAAGLAVAMSTGSAALLPDADRLALLACHFAVGGMLQLSAYSTGTLVVAWLARG AAAGLITIAVIVAGGALQLRTSTWLPVQLADMAVTRGGWDAVGQATLTLALAAALLRL ALSALVRTVPHA" sig_peptide complement(929099..929182) /locus_tag="CMS_0887" /old_locus_tag="CMS0887" /note="Signal peptide predicted for CMS0887 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.527 between residues 28 and 29" misc_feature complement(order(929120..929188,929231..929299, 929318..929386,929429..929497,929606..929665, 929723..929779)) /locus_tag="CMS_0887" /old_locus_tag="CMS0887" /note="6 probable transmembrane helices predicted for CMS0887 by TMHMM2.0 at aa 5-23, 43-62, 99-121, 136-158,165-187 and 202-224" gene complement(929788..931358) /locus_tag="CMS_0888" /old_locus_tag="CMS0888" /pseudo /db_xref="GeneID:6156801" misc_feature complement(order(929851..929919,929977..930045, 930082..930150,930208..930276,930346..930414)) /locus_tag="CMS_0888" /old_locus_tag="CMS0888" /note="5 probable transmembrane helices predicted for tmhmm2embl_unknown_000002_929788_930456 by TMHMM2.0 at aa 15-37, 61-83, 103-125, 138-160 and 180-202" /pseudo gene complement(930591..931358) /locus_tag="CMS_0889" /old_locus_tag="CMS0889" /db_xref="GeneID:6156802" misc_feature complement(order(930591..930659,930717..930785, 930798..930866,931023..931091,931161..931229, 931272..931325)) /locus_tag="CMS_0889" /old_locus_tag="CMS0889" /note="6 probable transmembrane helices predicted for CMS0889 by TMHMM2.0 at aa 12-29, 44-66, 90-112, 165-187,192-214 and 234-256" gene complement(931429..931824) /locus_tag="CMS_0890" /old_locus_tag="CMS0890" /pseudo /db_xref="GeneID:6156803" gene complement(932087..934270) /gene="rafA" /locus_tag="CMS_0891" /old_locus_tag="CMS0891" /db_xref="GeneID:6156804" CDS complement(932087..934270) /gene="rafA" /locus_tag="CMS_0891" /old_locus_tag="CMS0891" /EC_number="3.2.1.22" /codon_start=1 /transl_table=11 /product="alpha-galactosidase" /protein_id="YP_001709642.1" /db_xref="GI:170781310" /db_xref="GeneID:6156804" /translation="MPDTAVPSALLHLRASGVSLVLDLTEGRLPAVVHWGADLGDTTP ADLETMVRADLAPFAGSVADDPIRLAILPEAHTSWTGKPGLEGHRDGADWSPLFRVTS ATVDGDPLPVGVDGRPGSASTGPALVHVDAVDEVAGLGLALDVELLASGLVRKRAEAT NLGDTTYDLGGVTLALPLPPEAREILDFAGRWGLERTPQRRELVVGIHEREGRKGRTG PDAATLLSVGTPGFGFRHGDVRGVHVAFSGNHRHYAERLSTGRQVIGGGELLLPGEVR LAAGESYASPWVYAAFGHGLDDQAARFHRHLRARETHPRRDRPMTINVWEAVYFDHDL ARLTDLADRAAALGVERYVLDDGWFRHRRDDHAGLGDWYLDEGVWPDGLGPIIDHVTG LGMEFGLWFEPEMVNEDSDLARAYPEWIMQTGGRLPVRARQQQVLDLAIPEAYSYVLE RMTAILAENDIAYIKWDHNRDLVDAGISPRGQAGVHLQTLAAYRLMDELRARFPGLEI ESCSSGGARVDLGVLERTDRVWVSDCIDPLDRQTMMRWTMQLLPPELLGSHIASGVSH TTGRAHRLAFRAGSALYGHLGIEWDLAQATDEENADLAAWIALYKEERALMHTGTVVR ADESDPTLLVYGAVASSSDAALFFLASVGRSEVSPRGRFLLPGLDPARRYRVEPVRVD TPEPGFTAPAWWDGVELTGQALAASGLHAPGMLPESIAILRVTAV" misc_feature complement(932258..933427) /gene="rafA" /locus_tag="CMS_0891" /old_locus_tag="CMS0891" /inference="protein motif:HMMPfam:PF02065" /note="HMMPfam hit to PF02065, Glycoside hydrolase, clan GH-D, score 1.2e-149" misc_feature complement(933179..933229) /gene="rafA" /locus_tag="CMS_0891" /old_locus_tag="CMS0891" /note="PS00512 Alpha-galactosidase signature." gene complement(934356..934796) /locus_tag="CMS_0892" /old_locus_tag="CMS0892" /db_xref="GeneID:6158919" CDS complement(934356..934796) /locus_tag="CMS_0892" /old_locus_tag="CMS0892" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709643.1" /db_xref="GI:170781311" /db_xref="GeneID:6158919" /translation="MRARARRTLHPLSAGGKALGGGGGMAFTEGVHTIHYADGRYLTG DDIARAVVECAQELARAGAAAATVTVPVWLPQGGVGSVDLLIGPASQIVAEPVGPSED ELRDPEAVERIRAHTLRARRSQPGTSVSADRQDGTAVPALEDLD" gene 934832..935836 /locus_tag="CMS_0893" /old_locus_tag="CMS0893" /db_xref="GeneID:6156805" CDS 934832..935836 /locus_tag="CMS_0893" /old_locus_tag="CMS0893" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709644.1" /db_xref="GI:170781312" /db_xref="GeneID:6156805" /translation="MTYAAHPDRYSSMPYRRSGRSGLKLPELSLGLWHNFGTARPIDT QRAIVRRAFDLGITHFDLANNYGPPPGSAETAFGRILAEDLRPYRDEIVISSKAGYLM WDGPYGEWGSRKSMLASLDQSLGRMGLEYVDVFYSHRPDPETPIEETMGALATAVHQG KALYAGISNYSPEQTERAVAALAEHKVPLTIHQPSYSMFNRHVEGGLLPVLEEAGSGC IVFSPLAQGLLTDRYLSGSIPADSRAATSGFLDESAVSSVYLERARGLQAVAEGRGQT LAQLALSWVLRHPGITSALIGASSVEQLEQNVAAAGAPALTDDELAAIEPLAVDGTGR" misc_feature 934886..935818 /locus_tag="CMS_0893" /old_locus_tag="CMS0893" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 9.7e-71" gene 935844..937052 /locus_tag="CMS_0894" /old_locus_tag="CMS0894" /db_xref="GeneID:6156806" CDS 935844..937052 /locus_tag="CMS_0894" /old_locus_tag="CMS0894" /codon_start=1 /transl_table=11 /product="putative dipeptidase" /protein_id="YP_001709645.1" /db_xref="GI:170781313" /db_xref="GeneID:6156806" /translation="MTDAPAPSTALADRVARILDAQGIVDGHDDLVWALRERAVREGG PSASVADDVIARLAVEDAVPGLHTDLPRLARGRVAAQFWSVWVPNLPGIDPVRSTIEQ IDVVRRLVAAHPDRLALAVTADDVDRVVASGRVASLLGMEGGHSIGGSLGALRTMRAL GVRYMTLTHNANVAWADSATDAPVHHGLSASGERVVAEMERIGMLVDLSHVSADVMRH ALRIARRPVLFSHSGARAECDVPRNVPDDVLAALPANGGVCMATFVPQFVSPAVAAWH DETLALAVSEGVDPRDHEGVQAVAARRPGERPRATLADVVRHVERIREVAGPRHVGLG GDYDGVDCTPDGLDDVSRYPALIAALAERGWSDDDLRALAGGNALRVLRAADADDDVS RADADAGALA" misc_feature 935910..936995 /locus_tag="CMS_0894" /old_locus_tag="CMS0894" /inference="protein motif:HMMPfam:PF01244" /note="HMMPfam hit to PF01244, Peptidase M19, renal dipeptidase, score 8.5e-124" gene 937097..937903 /locus_tag="CMS_0895" /old_locus_tag="CMS0895" /db_xref="GeneID:6156807" CDS 937097..937903 /locus_tag="CMS_0895" /old_locus_tag="CMS0895" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709646.1" /db_xref="GI:170781314" /db_xref="GeneID:6156807" /translation="MRRMDPHAAASLLDDLADRGWPAEHRERHGGWILRAAGGVTKRA NSALPAGPVADPDAALDATEAFARAHGIDACVQVSPASEPADLAARLAARGYAPDART LVQVADPAAVGARLAAAAPIDPALEVTIADAPDDAWLDAWWSVDGRGGSAEAAVARRI LERGPAVYAAVRERAAADGSAVRVLATARLALVDGWGGLFAVATRPEARRRGLSRAAM AAAVDAGRDRGVTALWLQVVEENAGARALYAGLGFAPVSRYEYWARAARA" misc_feature 937622..937858 /locus_tag="CMS_0895" /old_locus_tag="CMS0895" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.9e-14" gene complement(937948..939759) /locus_tag="CMS_0896" /old_locus_tag="CMS0896" /db_xref="GeneID:6156808" CDS complement(937948..939759) /locus_tag="CMS_0896" /old_locus_tag="CMS0896" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709647.1" /db_xref="GI:170781315" /db_xref="GeneID:6156808" /translation="MGERTGIRAGRATRIRLAVVAALLAALAIPFGLATPANADVDDF SFRSFDADYRLSADADGRSVLRTTETLVAEFPDRDQNRGIRRELVEDYDGHPTGLRVL SVTDGSGTPRAYETDSDDGALVLTIADDDAYVRGEQAYVIEYEQHDVTRAYADTDADE FYWDVNGLGWEQPFGRVSATVEIAPELVPRLTGGADAAAGPAGADGPAEITRTDAGFV ATATDLGPRENLSLSIGFAPGTFTPRDSSFLAAPWPGLSLAGALLALAAAAGALVLRR RRLADAPGRGTIVAQYDPPAGVGVLVSSVISGNAARATTALLLDLAVRGAMRILEQDG GRKPAFSLELVDPSRVTDPDERRFVAAVFGDGAGGGAVKDLKRTDTKVATRIQKLMAG ITKRTVADGLRKPLPVGAITLLLVAASLGMVAAIAFAVLSLTQAYGGPVVIAFLVVGV LATAVAIVALVKHPLTERGVALRDHLAGLREFIRLAEADRIRMLQSPDGAERQDLPRD DRDVLRLTEELLPYAAMFGQEREWADELGRRYEHARDRPGWYAGQTPFAPAAFASSLG SVSSSMHGAYSGSSSSGGSSGGTTSGGGGGGGGGGGV" sig_peptide complement(937948..938064) /locus_tag="CMS_0896" /old_locus_tag="CMS0896" /note="Signal peptide predicted for CMS0896 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.998 between residues 39 and 40" misc_feature complement(order(938380..938448,938476..938544, 938941..939009,939643..939711)) /locus_tag="CMS_0896" /old_locus_tag="CMS0896" /note="4 probable transmembrane helices predicted for CMS0896 by TMHMM2.0 at aa 17-39, 251-273, 406-428 and 438-460" gene complement(939752..940156) /locus_tag="CMS_0897" /old_locus_tag="CMS0897" /db_xref="GeneID:6156809" CDS complement(939752..940156) /locus_tag="CMS_0897" /old_locus_tag="CMS0897" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709648.1" /db_xref="GI:170781316" /db_xref="GeneID:6156809" /translation="MTSAGASGTGDDEGDRGRDQGDDPAVAAEVLEAVLEPGPRRPVR RAVRAIGAIALAVVGGDVGGLGREAQLVVRRIDTGREVLRTDAGDLDEADRLLQRVRL DLETRSVREFVADWRLVDAGPSSGSSTGATGG" gene complement(940193..941464) /locus_tag="CMS_0898" /old_locus_tag="CMS0898" /db_xref="GeneID:6156810" CDS complement(940193..941464) /locus_tag="CMS_0898" /old_locus_tag="CMS0898" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709649.1" /db_xref="GI:170781317" /db_xref="GeneID:6156810" /translation="MVLPSSPVGQQAQWLLDTVNADDAVPVQETGERLAQVMLDAAPA EELAGVLEQVRGGRPWTATAHEEQGGQSVTTIASEGAGTFDMQVAVDDAGLIAGLFFG EPEGDREPATSWAELEEQAAALGGDVSLTVTRASDGELGERILEVLPDGVAATEARPI GSIFKLYVLGALVQAVEEDRIGWDDPLTVTDDVRSLPSGELQDAPTGTVVSVREAAGK MISISDNTATDMVIRAVGRERVEAALADLGHSDPPRNVPLPTTRDLFRVGWQDDGALR AEWADGDATERRALLDALPGGLIDVHVTAVTDVVWTDGVDWFATPDDIARAHLRLAEL AETPAGEPVRGILAANPGLPEPERFDHVAFKGGSSVGTLALAYLVEDGDDAWTVVVQA AAREASGLERQSAYAGLATDAAALLAGGSRG" gene complement(941699..942961) /locus_tag="CMS_0899" /old_locus_tag="CMS0899" /db_xref="GeneID:6156811" CDS complement(941699..942961) /locus_tag="CMS_0899" /old_locus_tag="CMS0899" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709650.1" /db_xref="GI:170781318" /db_xref="GeneID:6156811" /translation="MNLSRRSVLSRRSVLSRRSVLGGALAAVPVALVAAGPAHADDAT TPATPIPEVPLASNGRPVVRDIQKQLVARYGARTGFPAVTTDGVWTGDSHKVLIHALQ LEIGIDEATANGVMGPLTRAALQKQATLTVGSADTTGYLVHLLQASLVVMSTWDGPVD GTFSAEQGVRISQFQRTVALPETGRGDYRTWAALLASNGDPTRPGTAADGITVITPER AKTLKDAGYTIVGRYLTNSDRPDALEKRIVDGELDAIFAGGLKVVPIFQEGGTDTTYF SYGLGVRAAGRADDAARRLGFLPGTPIYYAVDFDATGDEVETYLAPYFRGIHDELRRR GSSYRVGVYAGRRICRTLAAAHLTELSYVADMSTGWGANLGVKIPENWAFDQILEHTI GTGDGAIGIDTNIVSGRDAGQSRVEPRG" sig_peptide complement(941699..941818) /locus_tag="CMS_0899" /old_locus_tag="CMS0899" /note="Signal peptide predicted for CMS0899 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 between residues 40 and 41" gene complement(943192..943557) /locus_tag="CMS_0900" /old_locus_tag="CMS0900" /db_xref="GeneID:6156812" CDS complement(943192..943557) /locus_tag="CMS_0900" /old_locus_tag="CMS0900" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709651.1" /db_xref="GI:170781319" /db_xref="GeneID:6156812" /translation="MRAEIDSAKREIGERARSARSGAIMLGAGVALALVSLGLLAAVI VALLLALPLWAATLITLALFGIATAVVVRVGLSRLSRGVPPVPSDTMHHARERMRPGD RGAGDDGSDGPAGSAPAAS" sig_peptide complement(943192..943356) /locus_tag="CMS_0900" /old_locus_tag="CMS0900" /note="Signal peptide predicted for CMS0900 by SignalP 2.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.956 between residues 55 and 56" misc_feature complement(943243..943557) /locus_tag="CMS_0900" /old_locus_tag="CMS0900" /inference="protein motif:HMMPfam:PF07332" /note="HMMPfam hit to PF07332, Protein of unknown function DUF1469, score 2.5e-05" misc_feature complement(order(943342..943410,943420..943488)) /locus_tag="CMS_0900" /old_locus_tag="CMS0900" /note="2 probable transmembrane helices predicted for CMS0900 by TMHMM2.0 at aa 24-46 and 50-72" gene complement(943738..944343) /locus_tag="CMS_0901" /old_locus_tag="CMS0901" /db_xref="GeneID:6156813" CDS complement(943738..944343) /locus_tag="CMS_0901" /old_locus_tag="CMS0901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709652.1" /db_xref="GI:170781320" /db_xref="GeneID:6156813" /translation="MTSTNRALNRLLVIVVGLVLIAAGVALGAGSLLPDVQSTVSGAA SDAKQPVADALSGGQQWILWVVALVALVLIVVLAWFALRQGHGRTGTLVRLEGGRDAS TPTGGSVVIDAKVAEQLLGDALRDDSAIVSVDVTAFEVARSTTLRVTAVARRGVSPVA VRRTVDEAVSRLDAVLGTEVPVVIQITGGLRSSMSSETRLA" sig_peptide complement(943738..943866) /locus_tag="CMS_0901" /old_locus_tag="CMS0901" /note="Signal peptide predicted for CMS0901 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.490 between residues 43 and 44" misc_feature complement(order(944098..944166,944257..944325)) /locus_tag="CMS_0901" /old_locus_tag="CMS0901" /note="2 probable transmembrane helices predicted for CMS0901 by TMHMM2.0 at aa 7-29 and 60-82" gene complement(944340..944888) /locus_tag="CMS_0902" /old_locus_tag="CMS0902" /db_xref="GeneID:6156814" CDS complement(944340..944888) /locus_tag="CMS_0902" /old_locus_tag="CMS0902" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709653.1" /db_xref="GI:170781321" /db_xref="GeneID:6156814" /translation="MRRETHSSRAGIAITLAVLLILVLAWLGTESVLAAIGSAPLLLA PADLASATLDAASAPAGALVAVGVAVAVVGLVLVIVGITPGSRGRRGGSVGRTAAVVD DRVIARSVALTASYAGEVSPDQVDVSVSKRQVLVRLTPSSGYTPDKAAIEQAVRAELD GYDYTPKLTAKVTLAKDGKVGS" sig_peptide complement(944340..944510) /locus_tag="CMS_0902" /old_locus_tag="CMS0902" /note="Signal peptide predicted for CMS0902 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.275 between residues 57 and 58" misc_feature complement(order(944643..944711,944802..944870)) /locus_tag="CMS_0902" /old_locus_tag="CMS0902" /note="2 probable transmembrane helices predicted for CMS0902 by TMHMM2.0 at aa 7-29 and 60-82" gene complement(944915..945289) /locus_tag="CMS_0903" /old_locus_tag="CMS0903" /db_xref="GeneID:6156815" CDS complement(944915..945289) /locus_tag="CMS_0903" /old_locus_tag="CMS0903" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709654.1" /db_xref="GI:170781322" /db_xref="GeneID:6156815" /translation="MSAAIAAPGTPGTATQATRGRTTITSRAVRRVVSAVTADALEVP ATDVSVTLTDAGGKLTVEARTPIRVPALSDRPVREGTLVERLIRAQTEVRDRVLGLTG STVGRVDLRITGARIQERRRVS" gene complement(945286..945474) /locus_tag="CMS_0904" /old_locus_tag="CMS0904" /db_xref="GeneID:6156816" CDS complement(945286..945474) /locus_tag="CMS_0904" /old_locus_tag="CMS0904" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709655.1" /db_xref="GI:170781323" /db_xref="GeneID:6156816" /translation="MTPTTTGLLVGAVLALSGLAFGFGGFLLVLIFMAAGFGVGRVLE GKLDVRGLADALRGRRSS" sig_peptide complement(945286..945351) /locus_tag="CMS_0904" /old_locus_tag="CMS0904" /note="Signal peptide predicted for CMS0904 by SignalP 2.0 HMM (Signal peptide probability 0.986) with cleavage site probability 0.331 between residues 22 and 23" misc_feature complement(945379..945447) /locus_tag="CMS_0904" /old_locus_tag="CMS0904" /note="1 probable transmembrane helix predicted for CMS0904 by TMHMM2.0 at aa 10-32" gene complement(945471..945899) /locus_tag="CMS_0905" /old_locus_tag="CMS0905" /db_xref="GeneID:6156817" CDS complement(945471..945899) /locus_tag="CMS_0905" /old_locus_tag="CMS0905" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709656.1" /db_xref="GI:170781324" /db_xref="GeneID:6156817" /translation="MTKRDREAPSDPRHAAAPPSPSEHHERDTMSSITPTSASTGVTG TGSTGGKNTIADGVVEKVAGIAARQVPGVHDLGNGAARAVGAIRNVIGQQDRGQGISV EVGETQVVGMEVTEVNVTITDVNLPSDKSSDDDAAEKRVQ" gene complement(946016..947197) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /db_xref="GeneID:6156818" CDS complement(946016..947197) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="YP_001709657.1" /db_xref="GI:170781325" /db_xref="GeneID:6156818" /translation="MSTATAPDGRHRVATPLHALPALDDERADGDMLPGTTRSVPRTH PHDGDATVDTIAPHEGGARADERTADLADWAAEAPAPALRRGHMAGTDVDEAVARYTA LYPGTDFRAAKGPGDFSYRYSFVGDENVTLRSSVFPAEHWGRMPVLPEYVVAWWREGS GAVDLGSHEVRSSGSRPFLLPSGRSFSFRSEPSVQNLVHIDATFLEETAAELHEGRSR PLVFDHTRPPTPEQTAAWRRAVGEASPVLQDATSSPLLRMQAGLLVARATLQLFPWHD VPFSAEMRAPRMSAVRAAIEYLHHHADRPITPADAARAAGISTRVLQLAVRRYEDTTP SALLRGIRLDRVRAELRDATPTTTTVRAVAEQWGFGHLGRFAASYAERFGELPSATLR G" misc_feature complement(946022..946165) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 0.0055" misc_feature complement(946037..946174) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /note="PS00041 Bacterial regulatory proteins, araC family signature." misc_feature complement(946181..946321) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 6.8e-05" misc_feature complement(946217..946282) /locus_tag="CMS_0906" /old_locus_tag="CMS0906" /note="Predicted helix-turn-helix motif with score 1068.000, SD 2.82 at aa 306-327, sequence ITPADAARAAGISTRVLQLAVR" gene complement(947359..948300) /locus_tag="CMS_0907" /old_locus_tag="CMS0907" /db_xref="GeneID:6156819" CDS complement(947359..948300) /locus_tag="CMS_0907" /old_locus_tag="CMS0907" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709658.1" /db_xref="GI:170781326" /db_xref="GeneID:6156819" /translation="MFDRKFISQAIDRSAQSPLDRRRFFSAAGVAGLGVGAAALIPAT GAQAADAQAEADAGAVTDAAVLNFALNLEYLEAEFYLRAVTGNGLVPNDTTGVGTLGA VTGGRAVQFKDYAIRQYAYEIAQDEKAHVKFLRAALGSAKVARPAIDLDATFTAAAQA AGLIKAGEKFDAFANQENFLLASFIFEDVGVTAYKGAAPLITNKTYLEAAAGILAVEA YHAGIIRSQLFARGLAAPANAISNARDSLDGRTDLDQGITVSGGANLVPTDANGIAFS RTTGQVLNIVYLNSKAVNRGGFYPAGINGSITTSAAN" sig_peptide complement(947359..947502) /locus_tag="CMS_0907" /old_locus_tag="CMS0907" /note="Signal peptide predicted for CMS0907 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.772 between residues 48 and 49" misc_feature complement(948163..948231) /locus_tag="CMS_0907" /old_locus_tag="CMS0907" /note="1 probable transmembrane helix predicted for CMS0907 by TMHMM2.0 at aa 24-46" gene 948627..949589 /locus_tag="CMS_0908" /old_locus_tag="CMS0908" /db_xref="GeneID:6156820" CDS 948627..949589 /locus_tag="CMS_0908" /old_locus_tag="CMS0908" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709659.1" /db_xref="GI:170781327" /db_xref="GeneID:6156820" /translation="MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 948699..948764 /locus_tag="CMS_0908" /old_locus_tag="CMS0908" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 949023..949565 /locus_tag="CMS_0908" /old_locus_tag="CMS0908" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.4e-41" gene complement(949586..950128) /locus_tag="CMS_0909" /old_locus_tag="CMS0909" /db_xref="GeneID:6156821" CDS complement(949586..950128) /locus_tag="CMS_0909" /old_locus_tag="CMS0909" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709660.1" /db_xref="GI:170781328" /db_xref="GeneID:6156821" /translation="MSERNTVIRSMHDLGLAAWFGGSLMGAVGLNGAAAAAKQPQERL RLSSIGWAKWAPVQLAALGAHAVGGLGLIYANKGRLAAQGEARSNTKVKAVLTIAAAG TTLYSALVGGRMAKHADEAPQGTTEPGAGVSDELASAQKQQKLLQWAIPALTAVLVVL AAQQGEQQRPVAGWIDRFKN" sig_peptide complement(949586..949693) /locus_tag="CMS_0909" /old_locus_tag="CMS0909" /note="Signal peptide predicted for CMS0909 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.417 between residues 36 and 37" misc_feature complement(order(949643..949696,949793..949846, 949907..949966,950024..950092)) /locus_tag="CMS_0909" /old_locus_tag="CMS0909" /note="4 probable transmembrane helices predicted for CMS0909 by TMHMM2.0 at aa 13-35, 55-74, 95-112 and 145-162" gene 950378..950770 /locus_tag="CMS_0910" /old_locus_tag="CMS0910" /db_xref="GeneID:6156822" CDS 950378..950770 /locus_tag="CMS_0910" /old_locus_tag="CMS0910" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709661.1" /db_xref="GI:170781329" /db_xref="GeneID:6156822" /translation="MGKAWMVMVAAVLGGHGFVGLFIEGSHMLGVLNVDFFVDVLYLL SAGVLLFVGTRQAPPGMIRATLVAFGGLYTLMGVLSLLDPELGGLTPTGFTIVDDFLF FGIGLSGLALALTPSSAEPLTTGGEALN" misc_feature order(950396..950455,950483..950536,950555..950623, 950651..950719) /locus_tag="CMS_0910" /old_locus_tag="CMS0910" /note="4 probable transmembrane helices predicted for CMS0910 by TMHMM2.0 at aa 7-26, 36-53, 60-82 and 92-114" gene complement(950797..951549) /locus_tag="CMS_0911" /old_locus_tag="CMS0911" /db_xref="GeneID:6156823" CDS complement(950797..951549) /locus_tag="CMS_0911" /old_locus_tag="CMS0911" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001709662.1" /db_xref="GI:170781330" /db_xref="GeneID:6156823" /translation="MPRPRDAAAARTAIVTPGPVPKHAQLRAILLADIGSAWPAHTAI PSERELAMTHDVSRATVRQAIRQLIEEQRLHTVQGKGTFVAGERIQSQLHLASFTEDM RRRGMVATTLVRHARMGVPPLEARAALGLDEGEPAWSIERLRLANGTPMALEVGWYSA RVAPDLGDHDLSASLYGVLAERYGVHIDGAEQTVWADAADADTAEALEVTPGASTLVF RRTSRAGGTPVEHVTSWYRGDRYQVHMALTGD" misc_feature complement(950824..951240) /locus_tag="CMS_0911" /old_locus_tag="CMS0911" /inference="protein motif:HMMPfam:PF07702" /note="HMMPfam hit to PF07702, UbiC transcription regulator-associated, score 2.2e-44" misc_feature complement(951298..951486) /locus_tag="CMS_0911" /old_locus_tag="CMS0911" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 3.1e-16" misc_feature complement(951352..951417) /locus_tag="CMS_0911" /old_locus_tag="CMS0911" /note="Predicted helix-turn-helix motif with score 1379.000, SD 3.88 at aa 45-66, sequence PSERELAMTHDVSRATVRQAIR" gene 951633..952163 /locus_tag="CMS_0912" /old_locus_tag="CMS0912" /db_xref="GeneID:6156824" CDS 951633..952163 /locus_tag="CMS_0912" /old_locus_tag="CMS0912" /codon_start=1 /transl_table=11 /product="PTS transport system component IIA" /protein_id="YP_001709663.1" /db_xref="GI:170781331" /db_xref="GeneID:6156824" /translation="MWGISVAPTLDARLWCIPVIHPLRGVPVVHVLSPLVGVALPLPS VPDALFAAGAMGPGVAITPPVELVDVVAPIEGTLLQVFPHAFVVVADDGLAVLVHLGI ETVGLAGAGFTAFAAKGDRVAAGAPVIAYDVPAILAAGLSSVVPVIVLERPAEDVRVL VDEGAALLPGSPLLSV" misc_feature 951771..952085 /locus_tag="CMS_0912" /old_locus_tag="CMS0912" /inference="protein motif:HMMPfam:PF00358" /note="HMMPfam hit to PF00358, Sugar-specific permease,EIIA 1 domain, score 1.5e-24" misc_feature 951909..951947 /locus_tag="CMS_0912" /old_locus_tag="CMS0912" /note="PS00371 PTS EIIA domains phosphorylation site signature 1." gene 952482..954587 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /db_xref="GeneID:6156825" CDS 952482..954587 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /EC_number="3.5.99.6" /codon_start=1 /transl_table=11 /product="putative PTS transport system EIIIc component/glucosamine-6-phosphate deaminase fusion protein" /protein_id="YP_001709664.1" /db_xref="GI:170781332" /db_xref="GeneID:6156825" /translation="MGVAIGFAKKADGSTALSAVVGYLVLSNVFTVMSPVVLAGQTTV AGAQVEIDYSVFGGIVVGLVTAWLFDRYHTIQLPSYLGFFGGRRFVPIIVSLVSLVIG FGLSYAYPVFDLGLAGLGAFIGGTGALGAFVYGFTNRMLIPVGLHHILNSYVWFLQGS YTKGDGSVVTGELTRFAAGDPTAGALTSGFYPVLMFGLPAAALAMIHLSNPAQRKAAI GILGAAGLTAFLTGVTEPLEFAFMFAAFPLYVVHALLTGLSLAIANLLDIHLGFSFSA GLFDLLLYGTAPAAKNIGLLVIMGVVYFAVYYVLFRLVIKRWNLRTPGREDVAAPVDG AAPRPCRGGRGCRGRCIRPSGRGPRRRRVGAHRRAADPGLRWARQPRPRRRVHHAPAR RGRGPHARRPRAPQGARRRRRDRGRRQRPGRLRPARGVAEGRDARGHLMEVVVVPTAE DAAPLVADAYRALLERRPDAVLGLATGSTPLPLYWELIRRHREEGLSFARARAFLLDE YVGLPDGHPERYRAFIAEELERHVDFAPDAILGPGDAGSDPLDAGPAYERAIREAGGI DLQILGIGTDGHLAFNMPMSSLGSRTRLKTLTPRTRRDNARFFGGDVDRVPTQCLTQG LATILDSRHAILLGFGRAKAPAVRAAVEGALSARWPASVLQLHPHATVVVDEEAAAEL EFVDHYRDTFAGKPAGQGL" sig_peptide 952482..952622 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /note="Signal peptide predicted for CMS0913 by SignalP 2.0 HMM (Signal peptide probability 0.760) with cleavage site probability 0.510 between residues 47 and 48" misc_feature 952482..953252 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /inference="protein motif:HMMPfam:PF02378" /note="HMMPfam hit to PF02378, Phosphotransferase system,EIIC, score 2.3e-39" misc_feature order(952530..952598,952626..952685,952746..952814, 952824..952892,953031..953099,953127..953180, 953199..953267,953358..953426) /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /note="8 probable transmembrane helices predicted for CMS0913 by TMHMM2.0 at aa 17-39, 49-68, 89-111, 115-137,184-206, 216-233, 240-262 and 293-315" misc_feature 953844..954536 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /inference="protein motif:HMMPfam:PF01182" /note="HMMPfam hit to PF01182,Glucosamine/galactosamine-6-phosphate isomerase, score 9.6e-63" misc_feature 954159..954215 /locus_tag="CMS_0913" /old_locus_tag="CMS0913" /note="PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature." gene 954587..955744 /gene="nagA" /locus_tag="CMS_0914" /old_locus_tag="CMS0914" /pseudo /db_xref="GeneID:6156826" gene complement(955806..959009) /locus_tag="CMS_0916" /old_locus_tag="CMS0916" /db_xref="GeneID:6158838" CDS complement(955806..959009) /locus_tag="CMS_0916" /old_locus_tag="CMS0916" /EC_number="3.2.1.24" /codon_start=1 /transl_table=11 /product="alpha-mannosidase" /protein_id="YP_001709665.1" /db_xref="GI:170781333" /db_xref="GeneID:6158838" /translation="MHQNQKLVQERILRALDERITPAVYSSKTPVALRAWMAPDEPVP VAEAMRQEYAPFALGEPWGRAWSTWWFEVTGEIPAEWAGRTVELLIDPGFIGDWPGNQ AECLVHTMDGVPVKGIHPRNTYVRLADEAAGGEQVRFLVEAAGNPNILVNEFVPTPYG DKATAPAEPIYRFRQAELAVFEPEVWALRFDVEVLYQLLMELPETEPRRHEVLRAIER ALDVLAMDDIVGTAAAARAELADVLSRPAGTSAHTLSGVGHAHIDSAWLWPIRETKRK TARTFSNVLRLAEQYPDFRFACSQAQQYVWVKENYPTVFEGIKQAIADGTWYPVGSMW IEPDGNLPGGEAMIRQLTHGMRFFQEELGVETHGVWLPDSFGYTASFPQIAKLAGLDW FLTQKLSWNQTNTFPHHTFFWEGIDGSRIFTHFPPIDTYNSTLEAEETHHAVRQFREK GRATMSLAPFGYGDGGGGPTRDMMERQRRTADLEGSPKVVVEHPDEFFRKAEAEYPDA PVWVGELYLELHRGTFTSHAREKRGNRQAEHRLREAELWWTIAAVRTGADYPYAALDR LWKQTLLQQFHDILPGSSITWVHRENEEDYARSLAELDALVADAIARVTAQATGEGEG DGSGAFAVNSTGHARTALVEAADGSALALVAVPGSGIAPLVAVDPASPVVTTRADGGT VLDNGLLRVTLDARGLITSIVDRRFADRELVPAGRFANLLQLHEDIPTAWDAWDVDAH YRASRTDLVEAASVELVEDSPLRATVEVVRQFGRSRVVQRVSLHADDARIHATADLDW LEDEKLLKVTFPLTIHAQHHSAEIQFGHVRRPTHTNTSWDEARFEVMAHRFVHVEEPG YGVALTNAGSYGHDITRTVGGTGEVETELRISLVRAARSPDPVQDIGHHLFEYALVPG VGIEGAVDAGLEQNLPVRVVRPGDATEAAPAVVAPPAVVAAPADAAEVVPSSLPTASG LVSVHGGTVRIEALKLADDGSGDVIVRLYESTGARAATRLEAHLDADRSTEVDVLERP LGEGFPRSIAFEPEADGRGVRLVLRAFQVITVRIHRA" misc_feature complement(955821..957131) /locus_tag="CMS_0916" /old_locus_tag="CMS0916" /inference="protein motif:HMMPfam:PF07748" /note="HMMPfam hit to PF07748, Glycosyl hydrolases family 38 C-terminal domain, score 1.5e-94" misc_feature complement(957471..958253) /locus_tag="CMS_0916" /old_locus_tag="CMS0916" /inference="protein motif:HMMPfam:PF01074" /note="HMMPfam hit to PF01074, Glycoside hydrolase, family 38, score 3.1e-130" gene complement(959076..960326) /locus_tag="CMS_0917" /old_locus_tag="CMS0917" /db_xref="GeneID:6156827" CDS complement(959076..960326) /locus_tag="CMS_0917" /old_locus_tag="CMS0917" /codon_start=1 /transl_table=11 /product="putative glucosidase" /protein_id="YP_001709666.1" /db_xref="GI:170781334" /db_xref="GeneID:6156827" /translation="MALYDTDEVRLTAVARVLAEQAAAYADAPVITLHTDLDEALAGA SFVFSAIRVGGMAGRSCDERLGMAHGVIGQETVGYGGISYALRTLPVVMDLAERIRAQ APDAWVINFTNPAGVVTEAMSRVLGDRVIGICDSPIGLARRVLGALGVQGDDVVIDYA GLNHLGWLRGLRVDGRDVLPDLMARPDLIGTFEEGRLFGAEWVTELGAVPNEYLHYYY FQREVRHADQLAAQTRGAFLVEQQGRFYEQLEHRHDVSALALWERTRLDRETTYMATN RQSAGMGDRDENDLVSGGYEDVAIALMRGIAYDQSARLILNVRNRGTLAALDADAVVE VPCVVDASGAHPVAGTELPDFGVGLVTNAKYVERQTIEAGVGGSRAAAVRALAHHPLV DSVTVARSLLEDAMHAFPALSYLR" misc_feature complement(959151..960326) /locus_tag="CMS_0917" /old_locus_tag="CMS0917" /inference="protein motif:HMMPfam:PF02056" /note="HMMPfam hit to PF02056, Glycoside hydrolase, family 4, score 1.6e-60" misc_feature complement(959925..960017) /locus_tag="CMS_0917" /old_locus_tag="CMS0917" /note="PS01324 Glycosyl hydrolases family 4 signature." gene complement(960416..961141) /locus_tag="CMS_0918" /old_locus_tag="CMS0918" /db_xref="GeneID:6156828" CDS complement(960416..961141) /locus_tag="CMS_0918" /old_locus_tag="CMS0918" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001709667.1" /db_xref="GI:170781335" /db_xref="GeneID:6156828" /translation="MILDRLRATRSATVAELAEAAGTSDATIRRDLARLDEQGALRRT HGGAVLVEVDAPFAEVEQVNREAKERIARAAAAQIQDGQSVVLDIGTTTLHLAEQLRG RSLTVITANVAAFDVLRDDRTVRLILLPGDWDPVYRSVSGPLTAESLRMLHADHAFVG VSGIADNGDLRDTTMAQVPIKRAMAEVSDRVTVLADSSKFPGTGAGRVAPTASLTQLI TEAAPHERVSQGLADKGVSVTVA" misc_feature complement(960482..961138) /locus_tag="CMS_0918" /old_locus_tag="CMS0918" /inference="protein motif:HMMPfam:PF00455" /note="HMMPfam hit to PF00455, Bacterial regulatory protein, DeoR, score 4e-60" misc_feature complement(961043..961108) /locus_tag="CMS_0918" /old_locus_tag="CMS0918" /note="Predicted helix-turn-helix motif with score 1398.000, SD 3.95 at aa 12-33, sequence ATVAELAEAAGTSDATIRRDLA" gene 961369..962391 /locus_tag="CMS_0919" /old_locus_tag="CMS0919" /db_xref="GeneID:6156829" CDS 961369..962391 /locus_tag="CMS_0919" /old_locus_tag="CMS0919" /codon_start=1 /transl_table=11 /product="putative carbohydrate kinase" /protein_id="YP_001709668.1" /db_xref="GI:170781336" /db_xref="GeneID:6156829" /translation="MSAAPRPDQAAADQAPAGLLVVGQLFADVVFGELPGGPRPGHEI WTSSFGHGPGGIANFAIAGARLGVPTTIAAAVGTDPFSLLVRAALAAEGVVLDHLVTL DDWALPVTASLGYDDDRALVTGGVPCPLGSDELVPGEVPAAAAALVHLDPHRSSWIGR AAAAGTDVYADVGWDPSERWDPAILDQLDDCHAFIPNELEASAYTGTDSAVQAARALA ARVPLSVVTSGSRGVVAVDAARGEEVVRPPLAVRAIDATGAGDVFGASLAASARAPWT LTQRIDFACLVAGITVTRPGGASGAPRLDELVPWLRAHPEAAEPGRYDYLADSLDHPD GARLLA" misc_feature 961369..961632 /locus_tag="CMS_0919" /old_locus_tag="CMS0919" /note="PS00430 TonB-dependent receptor proteins signature 1." misc_feature 961420..962280 /locus_tag="CMS_0919" /old_locus_tag="CMS0919" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 8.9e-24" gene 962475..963761 /locus_tag="CMS_0920" /old_locus_tag="CMS0920" /db_xref="GeneID:6156830" CDS 962475..963761 /locus_tag="CMS_0920" /old_locus_tag="CMS0920" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding transport protein" /protein_id="YP_001709669.1" /db_xref="GI:170781337" /db_xref="GeneID:6156830" /translation="MSHHPARRSRARRIVVGVATLALLAPVLASCSSSSGSSAGGQLD LWIWPDGLSQTVLDKVPAEVPGTTLNVSTIGGDFKQKLVTTFTGRSGLPSVTGVKGED MPYFLSEDGLFEDLDQLGAKDVTDQYPAWKLKEATTKDGQLIGLPIDIGPTALYYRAD VFKKAGLPSEPADVAAATATWDDYFAFGKKLKAATGGAIFVDASDVFTKSIGQGTTRF VDEDGDFTGDSPEIKTAWDRAVLAYKDGLTANVTDGSPDWASAISNGSLPALLGASWY QADIKSATADTSGDWRVAPMPGGPANIGGSFLSIPAGTKDPQAAFAVIKDVLSEDNQV TAYADKGIFPSATAAYDSPELQKGDDFFGGQSTVGIFADAAAKMPTAYTSPYDSQVQA AFVTELQNVTSLGKDPDQAWDDAVAAGEAALKTAKQ" sig_peptide 962475..962588 /locus_tag="CMS_0920" /old_locus_tag="CMS0920" /note="Signal peptide predicted for CMS0920 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.369 between residues 38 and 39" misc_feature 962517..963476 /locus_tag="CMS_0920" /old_locus_tag="CMS0920" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 2.1e-14" misc_feature 962535..962567 /locus_tag="CMS_0920" /old_locus_tag="CMS0920" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 963758..964792 /locus_tag="CMS_0921" /old_locus_tag="CMS0921" /db_xref="GeneID:6156831" CDS 963758..964792 /locus_tag="CMS_0921" /old_locus_tag="CMS0921" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709670.1" /db_xref="GI:170781338" /db_xref="GeneID:6156831" /translation="MIPVAVRPGGRPPAPSRAGAGPSGSAPSRAGAGTRGLRRTWPYY VAIAPFFVLFAIFGLFPAVYSLVLSFQDWNGLGTAKWVGLANFQALAADATFWLSIKN TLIIFALSTFPMMVIAVVVAAMLNSAKRLSTFYKISYFVPNVTSVVAMAVLFGSIFGD SFGLVNAGLRAIGLDGVAWLSTPWAIQVTIAILITYQWTGYNAIIFLAGMQAIGTEVY EAAKLDGAGAIRTFWSVTLPLLRPTILFVLVVSTITGLQSFTEAQVLTASSSTTNPNS GGAGQAGLTTVLYFYQQAFNYNRFGYGAAIAWGVFLLVVIFSIISFRLGSEKKEKVVR AAGTRKGHRA" misc_feature order(963878..963946,964064..964132,964166..964234, 964307..964375,964466..964534,964655..964723) /locus_tag="CMS_0921" /old_locus_tag="CMS0921" /note="6 probable transmembrane helices predicted for CMS0921 by TMHMM2.0 at aa 41-63, 103-125, 137-159,184-206, 237-259 and 300-322" misc_feature 964043..964747 /locus_tag="CMS_0921" /old_locus_tag="CMS0921" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 6.6e-15" misc_feature 964385..964471 /locus_tag="CMS_0921" /old_locus_tag="CMS0921" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 964912..965712 /locus_tag="CMS_0922" /old_locus_tag="CMS0922" /db_xref="GeneID:6156832" CDS 964912..965712 /locus_tag="CMS_0922" /old_locus_tag="CMS0922" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709671.1" /db_xref="GI:170781339" /db_xref="GeneID:6156832" /translation="MILHGILFAGSIVSLFPLYWLVVMASNTTSDIYKSPPVLVPGPH LWDNIQAVFRTIDFGGSLMNTVIVAVSVTVLVLFFDSIAAFTFAKYEFPGRRVLFGLL LVTFMLPAQLSVIPQFVTMINLGWVGQLQALIVPAAANAFGIFWLRQFIISSVPDELI DAARIDGAGFFRQYLTVCLPLIRPGLGFLGIFTFIAAWNDYLWPLIVLNDPGTLTLQV AMSQLNSAHGKDYGMVMAGALLAVIPLIVVFLVGAKQFIGDIAKGALK" sig_peptide 964912..964992 /locus_tag="CMS_0922" /old_locus_tag="CMS0922" /note="Signal peptide predicted for CMS0922 by SignalP 2.0 HMM (Signal peptide probability 0.868) with cleavage site probability 0.412 between residues 27 and 28" misc_feature order(964915..964983,965098..965166,965203..965271, 965284..965352,965431..965499,965602..965670) /locus_tag="CMS_0922" /old_locus_tag="CMS0922" /note="6 probable transmembrane helices predicted for CMS0922 by TMHMM2.0 at aa 2-24, 63-85, 98-120, 125-147,174-196 and 231-253" misc_feature 965095..965697 /locus_tag="CMS_0922" /old_locus_tag="CMS0922" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 7.6e-13" gene 965709..966473 /locus_tag="CMS_0923" /old_locus_tag="CMS0923" /db_xref="GeneID:6156833" CDS 965709..966473 /locus_tag="CMS_0923" /old_locus_tag="CMS0923" /EC_number="3.5.99.6" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate deaminase" /protein_id="YP_001709672.1" /db_xref="GI:170781340" /db_xref="GeneID:6156833" /translation="MTDVSTRPPRITAVDDAAALGMAAADVVQAFIGEDPAGVLGVAT GSSPEPLYAELARRHRERGLVTDGLSLVALDEYVGLPAGHPQSYLAFVRDRIAEPLGV PSARVIVPDGTAGDPRAAAHEHERRIRRLGGAGLQIVGIGANGHLGFNEPGSPFDGIS RVVRLAEGTRRDNARYFGGDPRRVPTHAITQGIATIMTAERILLVASGARKADALAAA LAGPVAEAVPASILQRHPRVTVVADRAALAGLAALA" misc_feature 965772..966467 /locus_tag="CMS_0923" /old_locus_tag="CMS0923" /inference="protein motif:HMMPfam:PF01182" /note="HMMPfam hit to PF01182,Glucosamine/galactosamine-6-phosphate isomerase, score 2.8e-44" gene 966570..969560 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /db_xref="GeneID:6156834" CDS 966570..969560 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /EC_number="3.2.1.23" /codon_start=1 /transl_table=11 /product="putative beta-galatosidase" /protein_id="YP_001709673.1" /db_xref="GI:170781341" /db_xref="GeneID:6156834" /translation="MSHLDDVAPGSASRLRPRARFATDAPVLSLDGDWRFRLLPEAPV DRAGATPEVADPALDAAALDAAGWTTLPVPSHWVLHGHGSPAYTNLQYLFPIDPPHVP DANPTGEHRRVFSLPASLAGADRVLLRTDGIEGLATFWVNGVEAGWTTGSRLTTELDV TELLVPGENVLGIRVHQWSAASYLEDQDQWWLPGIFRSIELLARPVGALDDVRVRADR DPADGSGRLDVQVDGAFPVVVRVPELGIHATWETAADVAPVSLPAVEAWNAERPRLYD ATVSSPGETATLRIGFRTVRIDGDALLVDGRRLTFRGVNRHESHPERGRVFDEAEARA DLELMKRSGVNAIRTSHYPPHPRLIDIADELGFWVVLECDLETHGFWDVEWRDNPSDD PRWRDAYLDRIARTVGRDRNHPSIVMWSLGNESGTGRNIAAMSAWVRRADPTRPVHYE GDLTGEHTDVYSRMYPTLEEIDSVCGTPVASIHETTGAAGAKQRAKPFILCEYGHAMG NGPGSLADYEDAIDRWPRLHGGFVWEWRDHGLLARTADGRPFHAYGGDFGEPVHDGSF VMDGLLLSDGTPTPGLAELAAVIAPVRVRVAADGSGVRVENRRHSASTDDVDLVWILA HDGRPVARGILEHAPLVAGSTATLPLPAEARAAGHAEEAHVTVQVVTRHDAPWAEAGH VVSSHQALVRDRPAPRPRPAGRWYGDALGVGTFDARGDLVSWGGVPVRGPRLELWRAP TENDRGAGQGSYELAEPELTRGRGAEESPPSADRWRGRGLHRLTHRLLGSTRTADGVE TRMRVQAAHSGAGVDVAFRWTATDRGLLLATEAVPFGVWDCTWPRVGVRIALPAALAD HPVTWHGTGPGESYADSRAAARVGRFASSVDGLAVTYARPQETGHRPELRSLVVGDGS ATPLTVTTVPDGSGHRAGFQLSRWTPQQMTDVGHPHELPDPDGLHLLLDDAQHGLGSR ACGPDVLPRHALWPSLRTWEVLLG" misc_feature 966639..967184 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /inference="protein motif:HMMPfam:PF02837" /note="HMMPfam hit to PF02837, Glycoside hydrolase, family 2, sugar binding, score 1.7e-58" misc_feature 967194..967448 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /inference="protein motif:HMMPfam:PF00703" /note="HMMPfam hit to PF00703, Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich domain, score 0.021" misc_feature 967452..968351 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /inference="protein motif:HMMPfam:PF02836" /note="HMMPfam hit to PF02836, Glycoside hydrolase, family 2, TIM barrel domain, score 7.9e-126" misc_feature 967602..967679 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /note="PS00719 Glycosyl hydrolases family 2 signature 1." misc_feature 967797..967841 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /note="PS00608 Glycosyl hydrolases family 2 acid/base catalyst." misc_feature 968661..969218 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /inference="protein motif:HMMPfam:PF02929" /note="HMMPfam hit to PF02929, Glycoside hydrolase, family 42, small chain, N-terminal, score 3.3e-07" misc_feature 969246..969554 /gene="lacZ1" /locus_tag="CMS_0924" /old_locus_tag="CMS0924" /inference="protein motif:HMMPfam:PF02930" /note="HMMPfam hit to PF02930, Glycoside hydrolase, family 42, small chain, C-terminal, score 5.8e-13" gene complement(969603..970091) /locus_tag="CMS_0925" /old_locus_tag="CMS0925" /db_xref="GeneID:6158781" CDS complement(969603..970091) /locus_tag="CMS_0925" /old_locus_tag="CMS0925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709674.1" /db_xref="GI:170781342" /db_xref="GeneID:6158781" /translation="MRLTARRRGRLSIWDTARTAFRVLPNDLDLFGHMNNGRYLTIMD VARLDLLVRSGLWARVRARGWYPVVAGQTVTYRRSLTLGERFVVESRVLGTHDRWSYV EQTFLVGDQVAAHAVVRNRFLQEGGGTVSASELDELVGPAPDDMRMPDWVVGWTSSTR TI" misc_feature complement(969747..970001) /locus_tag="CMS_0925" /old_locus_tag="CMS0925" /inference="protein motif:HMMPfam:PF03061" /note="HMMPfam hit to PF03061, Thioesterase superfamily,score 2.7e-10" gene 970375..970947 /locus_tag="CMS_0926" /old_locus_tag="CMS0926" /db_xref="GeneID:6156835" CDS 970375..970947 /locus_tag="CMS_0926" /old_locus_tag="CMS0926" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709675.1" /db_xref="GI:170781343" /db_xref="GeneID:6156835" /translation="MSTTYRVGYLVGSLSSTSINRALSLALKRLGAQAGLELTEIPIQ PLPFCSADMDGDYPAVANDFKAAIADADAIMIVTPEYNRSVPGVLKNALDFASRPYGE NAFQGKPSAVIGTSIGAVGTAVAQQHLRSILSFLASPELSQPEAYIQNTEGLISPEGA ISNAGTDEFLVGWLQAFHAHIEKNLASVSA" misc_feature 970387..970890 /locus_tag="CMS_0926" /old_locus_tag="CMS0926" /inference="protein motif:HMMPfam:PF03358" /note="HMMPfam hit to PF03358, NADPH-dependent FMN reductase, score 4.7e-25" gene 970999..971229 /locus_tag="CMS_0927" /old_locus_tag="CMS0927" /db_xref="GeneID:6156836" CDS 970999..971229 /locus_tag="CMS_0927" /old_locus_tag="CMS0927" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709676.1" /db_xref="GI:170781344" /db_xref="GeneID:6156836" /translation="MGAGRVAAPSPVPGTRHAMLPGMRKPIPTWIAVLITFLLGVISF SLLRSAWSIVLFGVLVLGTAVIHRVVSRRLRR" misc_feature order(971074..971133,971143..971211) /locus_tag="CMS_0927" /old_locus_tag="CMS0927" /note="2 probable transmembrane helices predicted for CMS0927 by TMHMM2.0 at aa 26-45 and 49-71" gene 971395..972408 /locus_tag="CMS_0928" /old_locus_tag="CMS0928" /db_xref="GeneID:6156837" CDS 971395..972408 /locus_tag="CMS_0928" /old_locus_tag="CMS0928" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001709677.1" /db_xref="GI:170781345" /db_xref="GeneID:6156837" /translation="MTGLVLVALTGCGASEEVPAASVAEAGEGSTTYPLTLSNCGHDV TIDQAPSRVVSLDQDSTEILLSLGLQDRMVGTASWTDPVLDSLADANAQVPRLADNAP TYEVLMGADPDFVTASFGRHYGTGGVVTRDRLAETGISSYLSPTDCDSDVSINGGGQR TTPLTVDALYQEIREMAEVFDVEDRGEALVSSLLQRAAAATDGMDLGGAQVMYWFADT KTPYMGGGFGATALLSRQTGLTDTFPEVRDDFIATGWETVVDRDPDILVLGDLQRNRF PGDKLQDKVDFLKSDPLTRDLTAVKEDRMVALHGAELNPSIRFVDGLEKIRAWWDARG DRL" sig_peptide 971395..971472 /locus_tag="CMS_0928" /old_locus_tag="CMS0928" /note="Signal peptide predicted for CMS0928 by SignalP 2.0 HMM (Signal peptide probability 0.955) with cleavage site probability 0.529 between residues 26 and 27" misc_feature 971542..972327 /locus_tag="CMS_0928" /old_locus_tag="CMS0928" /inference="protein motif:HMMPfam:PF01497" /note="HMMPfam hit to PF01497, Periplasmic binding protein, score 1.9e-05" gene 972483..973508 /locus_tag="CMS_0929" /old_locus_tag="CMS0929" /db_xref="GeneID:6156838" CDS 972483..973508 /locus_tag="CMS_0929" /old_locus_tag="CMS0929" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709678.1" /db_xref="GI:170781346" /db_xref="GeneID:6156838" /translation="MGLPHALRVAVLLALGIVALALSVGVAVTLGPADVSLVNVRDIL LNHAGLASIPVRVSEDAIVWQERLPRALVAAACGAGLGLCGVVLQSLLRNPLADPFVL GVSSGASTGAVLIGVLGLGGGAIGMSGGAFIGALVAFGFVLLLARFSSGGTAGVILAG VAGTQLFSALTSLVVFAFADSDETRGIMFWLLGSLEGMRWDEVGLSVGVVAVGAVVCL ASARSLDAFAFGEEVASSLGIHVGRTRTILLVVTALLTATLVSIAGAIGFVGLVLPHA ARLMFGQRHARVVPATIVLGAVFMVWVDAVSRLAFAPTPLPVGVGTALVGVPVFMLLL MRNRGRA" sig_peptide 972483..972581 /locus_tag="CMS_0929" /old_locus_tag="CMS0929" /note="Signal peptide predicted for CMS0929 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.365 between residues 33 and 34" misc_feature order(972501..972569,972690..972758,972777..972836, 972849..972917,972951..973019,973233..973301, 973338..973391,973419..973487) /locus_tag="CMS_0929" /old_locus_tag="CMS0929" /note="8 probable transmembrane helices predicted for CMS0929 by TMHMM2.0 at aa 7-29, 70-92, 99-118, 123-145,157-179, 251-273, 286-303 and 313-335" misc_feature 972573..973490 /locus_tag="CMS_0929" /old_locus_tag="CMS0929" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 7.2e-80" gene 973505..974275 /locus_tag="CMS_0930" /old_locus_tag="CMS0930" /db_xref="GeneID:6156839" CDS 973505..974275 /locus_tag="CMS_0930" /old_locus_tag="CMS0930" /codon_start=1 /transl_table=11 /product="Fe uptake system permease" /protein_id="YP_001709679.1" /db_xref="GI:170781347" /db_xref="GeneID:6156839" /translation="MTLEAHGVSWSRGGPLVVDGVTLEPAPGSTVGLLGPNGSGKSSL LKLLQGAASPDSGRVTLDGADLAGIRRRDVARRVATVTQHGETEVDIVVRDVVRLGRT PYRTLLGGDTAEDQAAIDRAIAHVGLEDKADRAWRTLSGGERQRAHIARALAQEPREL LLDEPTNHLDIRHQLELLALVRDLPVTTVIALHDLNLAAMYCDAVLVLRAGRVVAGGD PREVLTPELIADVYGVRARVAHDEAAGCPRVLFDAAPL" misc_feature 973586..974137 /locus_tag="CMS_0930" /old_locus_tag="CMS0930" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.8e-53" misc_feature 973607..973630 /locus_tag="CMS_0930" /old_locus_tag="CMS0930" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 974373..975335 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /db_xref="GeneID:6156840" CDS 974373..975335 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709680.1" /db_xref="GI:170781348" /db_xref="GeneID:6156840" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 974445..974510 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 974510..974631 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 974631..974696 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 974781..975323 /locus_tag="CMS_0931" /old_locus_tag="CMS0931" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(975346..976068) /locus_tag="CMS_0932" /old_locus_tag="CMS0932" /db_xref="GeneID:6156841" CDS complement(975346..976068) /locus_tag="CMS_0932" /old_locus_tag="CMS0932" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709681.1" /db_xref="GI:170781349" /db_xref="GeneID:6156841" /translation="MSRPASTSRGIRGPRSGSQHGSMTRPGETAPDSRGRTGLHLRGT DLDRNPDVVVKRVEVTSDGWHVLRRTTLDLRLRDGSWQEQQRETYDRGDGATVLLYAA DTHRILLTRQFRYPAYVNGHPDGMLIEAAAGLLDEDSPDGAIRREAREELGVEIVALT HLFDLFMSPGSVTERVHHYLASYTPADVVGAGGGVAEEGEDIERIEVSLDEALAMVAD GRIADGKTVILLQHVALHGFPA" misc_feature complement(975370..975798) /locus_tag="CMS_0932" /old_locus_tag="CMS0932" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 5.6e-20" misc_feature complement(975391..975414) /locus_tag="CMS_0932" /old_locus_tag="CMS0932" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 976149..977180 /locus_tag="CMS_0933" /old_locus_tag="CMS0933" /db_xref="GeneID:6156842" CDS 976149..977180 /locus_tag="CMS_0933" /old_locus_tag="CMS0933" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001709682.1" /db_xref="GI:170781350" /db_xref="GeneID:6156842" /translation="MMSRRVGIRDVAEAAGVSLTTVSHSLSGAGQVSEATRERVKAVA ARLNYAPNRQASGLRSRRSQIIGFVSDEITTTPYAGRVLLGAQEAAARQGWVLMIVNT SADADAEARSIEALLQHNVDGIVYARMYHQRVVVPEALAAVPTVLLDATTGNDHVSSV VPDEQGAAASAVAHLIAAGHRRIGYLSNVEDIPATRGRIRGYRQALHEHGIAVDESLL VPSGSTTGPGREAAGRLLDRPDRPTALFCFNDRIAMGAYQAAQARGLRIPEDLSVVSI DNFEVIAAALDPGLTTIALPHHEMGRWAIERLALELESARDDEPLEPEQVRMRCPLIE RQSVGPPPP" misc_feature 976164..976241 /locus_tag="CMS_0933" /old_locus_tag="CMS0933" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 4.4e-07" misc_feature 976164..976229 /locus_tag="CMS_0933" /old_locus_tag="CMS0933" /note="Predicted helix-turn-helix motif with score 1576.000, SD 4.55 at aa 29-50, sequence VGIRDVAEAAGVSLTTVSHSLS" misc_feature 976335..977156 /locus_tag="CMS_0933" /old_locus_tag="CMS0933" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 1.2e-29" gene complement(977177..978139) /locus_tag="CMS_0934" /old_locus_tag="CMS0934" /db_xref="GeneID:6156843" CDS complement(977177..978139) /locus_tag="CMS_0934" /old_locus_tag="CMS0934" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709683.1" /db_xref="GI:170781351" /db_xref="GeneID:6156843" /translation="MTHANAPFTPVGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSRRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature complement(977201..977743) /locus_tag="CMS_0934" /old_locus_tag="CMS0934" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1e-41" misc_feature complement(978002..978067) /locus_tag="CMS_0934" /old_locus_tag="CMS0934" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene 978337..979635 /locus_tag="CMS_0935" /old_locus_tag="CMS0935" /db_xref="GeneID:6156844" CDS 978337..979635 /locus_tag="CMS_0935" /old_locus_tag="CMS0935" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001709684.1" /db_xref="GI:170781352" /db_xref="GeneID:6156844" /translation="MMRHAKRRLTGVSLLAAALLVTQTACASGTAGGTDGKDGQLTLW THNGGNTEELAAVQSVVDAYNASQDTTTVELKSFPQASYNDSVVAAAAAGKLPCLVDI DGPNVPNWAWAKYVVPLDLSVDLGENLPSTIGTWNDQTYAVGQYDVSLAMFARRSVLE RAGIRIATVDEPWTRDETDQALAALKAEGTWSAPLDIGTADVGEWYPYAYSPLLQSAG GDLLDRSSLQSAEGELDGPAAVDWATWMQSLVEDGYVSAKSGADPALDLINDQTAVMY GGSWASAQLSEAIGDDLAVMPPPDLGQGVTVGGGSWQWGVTTGCADPAAAMDYLSFSL SPESIATVAKAAGTIPATDAAAALVPGFEEGGDLALFREFSKRFAELRPATPAYPFIS STFTKSMQDILDGADPQAALTDAVEDIDGNIESNGGYTQK" sig_peptide 978337..978417 /locus_tag="CMS_0935" /old_locus_tag="CMS0935" /note="Signal peptide predicted for CMS0935 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.785 between residues 27 and 28" misc_feature 978370..979356 /locus_tag="CMS_0935" /old_locus_tag="CMS0935" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 3.5e-17" gene 979705..980721 /locus_tag="CMS_0936" /old_locus_tag="CMS0936" /db_xref="GeneID:6156845" CDS 979705..980721 /locus_tag="CMS_0936" /old_locus_tag="CMS0936" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709685.1" /db_xref="GI:170781353" /db_xref="GeneID:6156845" /translation="MTTITRSRPSGAGGSAPGSGADEGSGPGSPSGPGRAPAGRTTRP RRPRAHAHEQRAGWAMLGPGMILLGLFVLVPAVLAFVLAFTNARLISPYPATFVGLDN LTRLLADDTFWHALRNVAFFAVVVVPVQAGLALGLALLIDAKVKGTTFFRTVYFLPVV TSMVVVSLLWLFMYRPDGLINVLISRVTGGAVQGPDWLGDPTTAMPAIILMSVWQGVG FHMVIWLSGLQTIPPDLHEAAGLDGVTRWQRFRYITWPGLAATRSLILVTITIQALSL FTQISVMTQGGPLDSTTTVVYEAVRSGFAQQQTGYASAISLVFFVIVLAISAVQRFIT RERD" sig_peptide 979705..979767 /locus_tag="CMS_0936" /old_locus_tag="CMS0936" /note="Signal peptide predicted for CMS0936 by SignalP 2.0 HMM (Signal peptide probability 0.903) with cleavage site probability 0.808 between residues 21 and 22" misc_feature order(979885..979953,980059..980127,980164..980223, 980314..980382,980476..980544,980635..980703) /locus_tag="CMS_0936" /old_locus_tag="CMS0936" /note="6 probable transmembrane helices predicted for CMS0936 by TMHMM2.0 at aa 61-83, 119-141, 154-173,204-226, 258-280 and 311-333" misc_feature 980038..980718 /locus_tag="CMS_0936" /old_locus_tag="CMS0936" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 9.1e-07" gene 980871..981707 /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /db_xref="GeneID:6156846" CDS 980871..981707 /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709686.1" /db_xref="GI:170781354" /db_xref="GeneID:6156846" /translation="MRIALAAVFAFPLVFMLVSSLKPDRQIFSDLSSFAAFLPTGDLS FANYAAVFERVPAARFLLNSIGISAITVVLGILVNSLAAFALSRMRIPGKGLILTLVI ATLVVPFETLALPLVWWVNQLPSFVVDGFAIGFSRGWIDTYQVQIIPFVANAFSIYLF HQYFESIPKELDEAARVDGAGWFRIYRQLIMPLSGPAIATVAILTFLPAWNSYLWPLM VVQSEELRPVMVGVQYFFQLNVPWGEVMAYASLITLPVVVLFIAFQRSFVSSIAASGV KG" sig_peptide 980871..980933 /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /note="Signal peptide predicted for CMS0937 by SignalP 2.0 HMM (Signal peptide probability 0.972) with cleavage site probability 0.305 between residues 21 and 22" misc_feature order(980880..980933,980952..981020,981063..981131, 981156..981224,981282..981350,981435..981503, 981591..981659) /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /note="7 probable transmembrane helices predicted for CMS0937 by TMHMM2.0 at aa 4-21, 28-50, 65-87, 96-118,138-160, 189-211 and 241-263" misc_feature 981039..981689 /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.2e-13" misc_feature 981360..981446 /locus_tag="CMS_0937" /old_locus_tag="CMS0937" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 981713..982717 /locus_tag="CMS_0938" /old_locus_tag="CMS0938" /db_xref="GeneID:6156847" CDS 981713..982717 /locus_tag="CMS_0938" /old_locus_tag="CMS0938" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709687.1" /db_xref="GI:170781355" /db_xref="GeneID:6156847" /translation="MALRLPDKWIWDSWYVQEGGVTHAFYLHASRALGDPDRRHHHPI VGHAVSRDLVSWTVLEDAIIVSEPGAFDDGTTWTGSVVRADDGLWWMFYTGTTLAEGM LVQRIGAATSTDLVTWAKVSREPLVEADPRWYEQLDLDAWHDQAWRDPWVQRLPGAST WHMLVTARAATGDPRERGVLGHATSEDLVDWTVHPPLSAPGQGFGQLEVFQHEVVDGV PVLLFCCARSELGHERQAAGEAGGVYSVVVDARLTDVDFRRARLFPRTDLYASRLVRD TAGGWVLLAFVNEVDGRFIGELSDPVPVTADPREGLVPRGAHPIAVSADTREEAGVPS" gene 982779..984848 /locus_tag="CMS_0939" /old_locus_tag="CMS0939" /db_xref="GeneID:6156848" CDS 982779..984848 /locus_tag="CMS_0939" /old_locus_tag="CMS0939" /codon_start=1 /transl_table=11 /product="putative levanase" /protein_id="YP_001709688.1" /db_xref="GI:170781356" /db_xref="GeneID:6156848" /translation="MESARPPLAPRTAHPRGRMAALAAAAALVCALAVPASSATAEPT VPADGFADGFAADADRYRAQYHFTVPDHWKNDPQRPVVIDGVTHYYYLYNADYDQEVG TSWRLATTTDGVAWADQGIAAEKKTNPNFDLWSGSAVVDPEGTAGFGRGAVVMLVTQM DHPTPQQIVDASGPQAQFLWYSTDGGRTFTPSGEEAVLPNPGVRDFRDPKVVWDDERG SWVMLIAEGATLSFSTSPDLRSWTRVSTFAADGLGVLECPDLFRITADDGTSKWVLGA SANGYATGEPNTYAYWTGSFDGRAFVPDPGTGHRWLDQGFDWYGAVTWADPTAQHEER RLAVGWMNNWSYPKAGPTWESDGFTGTDSITREIRLARADGGYRLLSQPIAALAGHAT SVRELGPVRVDGSVVLPYAGTAYQLETEIAWDRLDNVGLQLRRSADGSRHADVGVFRD TLYANRGGTGNPDPTGNKLESRSPFDASAKEVKLRILVDRTTVEVFVDYGEVVHSSQV FAEPADAGIALFTQGGAATFSNLRITEFADLAQRPAHVLADFEGTTAGVGWTGTGDLV GLAPNGSPLVGRVGRQALDTYVPGRGDAATGTLTSPPFTIDRDAIHLLIAGGDHGLGA EPATSVNLLVDGEPVRTATGDDSAKLRPVAWDVSDLAGRTARIQVLDDATGAWGHLMV DQVMLAD" sig_peptide 982779..982901 /locus_tag="CMS_0939" /old_locus_tag="CMS0939" /note="Signal peptide predicted for CMS0939 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.750 between residues 41 and 42" misc_feature 982974..984278 /locus_tag="CMS_0939" /old_locus_tag="CMS0939" /inference="protein motif:HMMPfam:PF00251" /note="HMMPfam hit to PF00251, Glycoside hydrolase, family 32, score 1.5e-20" gene 985206..985550 /locus_tag="CMS_0940" /old_locus_tag="CMS0940" /db_xref="GeneID:6156849" CDS 985206..985550 /locus_tag="CMS_0940" /old_locus_tag="CMS0940" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709689.1" /db_xref="GI:170781357" /db_xref="GeneID:6156849" /translation="MEKVAGIAARQVPGVHDLGNGAARAVGAIRNVIGQQDRGQGISV EVGEKQVAADIVVVAEYPVALQDLADRIREAVTDAISQVVGMDVTEVNVTVSDVHIPS DDKDDDSQSRVQ" misc_feature 985209..985502 /locus_tag="CMS_0940" /old_locus_tag="CMS0940" /inference="protein motif:HMMPfam:PF03780" /note="HMMPfam hit to PF03780, Protein of unknown function DUF322, score 2.4e-11" gene 985774..986592 /locus_tag="CMS_0941" /old_locus_tag="CMS0941" /db_xref="GeneID:6156850" CDS 985774..986592 /locus_tag="CMS_0941" /old_locus_tag="CMS0941" /codon_start=1 /transl_table=11 /product="putative aquaporin" /protein_id="YP_001709690.1" /db_xref="GI:170781358" /db_xref="GeneID:6156850" /translation="MSKSTTATTAPRDTPAQGRGQKAASAGDRPSTAARWGAEAFGTF LLVFGGVGTALYASAFPDDGNATGVGFLGVALAFGLTVMAGIAAVGGISGGHFNPAVS VGLAFAGRIGWREVPGYVVAQLVGGILASSALALIAADGPTGYLASKQDAGFASNGFG DASPGGFGLGAVLLVEVILTAVFVTVILAVTAQKAYAAVAPIVIGLTLTLIHLISIPV SNTSVNPARSIAAAIYGGPEALGQVWAFIVAPLVGAAIAGLAHRALTRAADVPA" misc_feature 985849..986556 /locus_tag="CMS_0941" /old_locus_tag="CMS0941" /inference="protein motif:HMMPfam:PF00230" /note="HMMPfam hit to PF00230, Major intrinsic protein,score 7.7e-39" misc_feature order(985879..985947,985990..986058,986119..986187, 986272..986340,986359..986427,986485..986553) /locus_tag="CMS_0941" /old_locus_tag="CMS0941" /note="6 probable transmembrane helices predicted for CMS0941 by TMHMM2.0 at aa 36-58, 73-95, 116-138, 167-189,196-218 and 238-260" misc_feature 986059..986085 /locus_tag="CMS_0941" /old_locus_tag="CMS0941" /note="PS00221 MIP family signature." gene 986683..987855 /locus_tag="CMS_0942" /old_locus_tag="CMS0942" /db_xref="GeneID:6156851" CDS 986683..987855 /locus_tag="CMS_0942" /old_locus_tag="CMS0942" /note="Contains domains (PF02987, Late embryogenesis abundant protein) common to plant proteins." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709691.1" /db_xref="GI:170781359" /db_xref="GeneID:6156851" /translation="MNDAAPAIRPIDLTGIDAAHPEGETVAHRVGVAAAETAAGVTGV HHLGGSAARALDAASRAIRGTSTGPGVTVSEEAGGTVIDIDLVVEYPTPVQDVVDETR EQVARAARQIAPGAVRVNIRVTDVHGPFDDVQSPAGAALEKAKDAGSDALEKAKDAGS DALEKAKDAGSDALEKAKDAGSDALEKAKDAGSDALEKAKDAGSDALEKAKDAGSDAL EKAKAAGADGLDKAKAAGSEGLEKAKAAGAEAADRAREAGDRIQDASADAATRAHGAG SRAADTAKEIGSEVADRAKAAGAVLADSAKADVEETREAAEERDERAAADAADFDTYA EPAGSAPEVTVIVDGHGEQPTRIEVDGPATVEVQGDRVEVDGSDASRTEAEDADRS" misc_feature 987106..987339 /locus_tag="CMS_0942" /old_locus_tag="CMS0942" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 2.3e-07" misc_feature 987370..987579 /locus_tag="CMS_0942" /old_locus_tag="CMS0942" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 0.083" gene complement(987884..988455) /locus_tag="CMS_0943" /old_locus_tag="CMS0943" /pseudo /db_xref="GeneID:6156852" misc_feature complement(988375..988434) /locus_tag="CMS_0943" /old_locus_tag="CMS0943" /note="1 probable transmembrane helix predicted for CMS0944 by TMHMM2.0 at aa 20-39" /pseudo misc_feature complement(988381..988413) /locus_tag="CMS_0943" /old_locus_tag="CMS0943" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." /pseudo gene complement(988547..988990) /locus_tag="CMS_0945" /old_locus_tag="CMS0945" /db_xref="GeneID:6156853" CDS complement(988547..988990) /locus_tag="CMS_0945" /old_locus_tag="CMS0945" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709692.1" /db_xref="GI:170781360" /db_xref="GeneID:6156853" /translation="MTAATPPGSTPSLDLPLYGASWAEAMRRFFLKYATFRGRASRSE FWWWALTGFVVSSVLRTLSDLDTDGRQALGAFDAVTITDSWGAVLGVFQLAVFIPSFA VSWRRLHDVDRSGTWTFINFIPILGTIVYVVMTASRSRPGGARFD" misc_feature complement(988550..988897) /locus_tag="CMS_0945" /old_locus_tag="CMS0945" /inference="protein motif:HMMPfam:PF05656" /note="HMMPfam hit to PF05656, Protein of unknown function DUF805, score 8.2e-21" misc_feature complement(order(988583..988642,988679..988747, 988805..988858)) /locus_tag="CMS_0945" /old_locus_tag="CMS0945" /note="3 probable transmembrane helices predicted for CMS0945 by TMHMM2.0 at aa 20-37, 57-79 and 92-111" gene complement(989067..989534) /locus_tag="CMS_0946" /old_locus_tag="CMS0946" /db_xref="GeneID:6156854" CDS complement(989067..989534) /locus_tag="CMS_0946" /old_locus_tag="CMS0946" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709693.1" /db_xref="GI:170781361" /db_xref="GeneID:6156854" /translation="MIDALQDFTNGLPELLRWFGIMVTAMIPFLEVELAAVLGVLSGQ HVAVAVLAAVVGNVAIVALIVLVASRTRSRLTRDSAKEETPRRAKIRRTFDRYGVPGV SLLGPLLVPTHFTSAAMVSFGARPRAVLIWETIAIAVWGVAFGAFAVLGLAVV" misc_feature complement(order(989082..989150,989178..989246, 989331..989399,989412..989480)) /locus_tag="CMS_0946" /old_locus_tag="CMS0946" /note="4 probable transmembrane helices predicted for CMS0946 by TMHMM2.0 at aa 19-41, 46-68, 97-119 and 129-151" gene complement(989531..990661) /locus_tag="CMS_0947" /old_locus_tag="CMS0947" /db_xref="GeneID:6156855" CDS complement(989531..990661) /locus_tag="CMS_0947" /old_locus_tag="CMS0947" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709694.1" /db_xref="GI:170781362" /db_xref="GeneID:6156855" /translation="MSTTSATRRGTAPTFVQSTMLVTGREVRMRLRSKSFLISTGILL VGILASIIVSGFLTANAGSGDGERTRVAVVGAAQQTVSAAASLEGVPADSVEDARAMV RDGEVDAAVVPDTQADADGAVLVIGDTSAPDGVVSALTDTPRVELLDEPATNPAIAYL VALAFGVVFFISALTFGQIIAQSVVEEKQTRVVELLMSTIPVRALLAGKVLGNSILAF AQIALIALMTGVGLLVTEQTALLAIIGPAVIWFVVFFLFGFVLLASLFAAAASLVSRQ EDVGAVTAPVTYLVMIPYFAVIFFNDNPVVMTVMSYVPFSAPVGMPMRLFLGEAQWWE PLVSLAVLIATTAVVVALGSRIYSNSLLRTGSRVKLREALKG" sig_peptide complement(989531..989719) /locus_tag="CMS_0947" /old_locus_tag="CMS0947" /note="Signal peptide predicted for CMS0947 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.364 between residues 63 and 64" misc_feature complement(order(989591..989659,989678..989746, 989759..989827,989864..989932,989960..990028, 990119..990187,990491..990559)) /locus_tag="CMS_0947" /old_locus_tag="CMS0947" /note="7 probable transmembrane helices predicted for CMS0947 by TMHMM2.0 at aa 35-57, 159-181, 212-234,244-266, 279-301, 306-328 and 335-357" gene complement(990658..991539) /locus_tag="CMS_0948" /old_locus_tag="CMS0948" /db_xref="GeneID:6156856" CDS complement(990658..991539) /locus_tag="CMS_0948" /old_locus_tag="CMS0948" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001709695.1" /db_xref="GI:170781363" /db_xref="GeneID:6156856" /translation="MLEVQNVTRSFGDRRVLDDVSFTVRPGRLTGFVGGNGAGKTTTM RIMLGVLTADSGTVSLDGSDLGTSSRRTFGYMPEERGLYPKMKLQEQIVYLGRLHGMT AADATTSTERLLERLSLGERRDDPIESLSLGNQQRAQIAASLVHDPEVLVLDEPFSGL DPIAVETVLGVLTERAAQGVPVLFSSHQLDIVERLCDDVVVIAEGRIRASGDREELRD QHSRPLTELQIAGDGGWVRDVPGVEVVEFDGGYVLFEADEEARQRVLAEAVSRGSVTG FTRRRPTLSEIFQEVVQ" misc_feature complement(990925..991461) /locus_tag="CMS_0948" /old_locus_tag="CMS0948" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1e-49" misc_feature complement(991108..991152) /locus_tag="CMS_0948" /old_locus_tag="CMS0948" /note="PS00211 ABC transporters family signature." misc_feature complement(991417..991440) /locus_tag="CMS_0948" /old_locus_tag="CMS0948" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 991774..992139 /locus_tag="CMS_0949" /old_locus_tag="CMS0949" /db_xref="GeneID:6156857" CDS 991774..992139 /locus_tag="CMS_0949" /old_locus_tag="CMS0949" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709696.1" /db_xref="GI:170781364" /db_xref="GeneID:6156857" /translation="MLFALIATGIGTAPLAIGGIVLLGLSAIVRVVAIVWARRRLAVV GRGRGSWQRWIHVLWALECLAFVAGLLLAHSSVGAVATAAIVGVLVGVASAALAGGAA RRAGRGSGFVDSASITAYA" sig_peptide 991774..991872 /locus_tag="CMS_0949" /old_locus_tag="CMS0949" /note="Signal peptide predicted for CMS0949 by SignalP 2.0 HMM (Signal peptide probability 0.662) with cleavage site probability 0.241 between residues 33 and 34" misc_feature order(991816..991884,991933..991992,992002..992070) /locus_tag="CMS_0949" /old_locus_tag="CMS0949" /note="3 probable transmembrane helices predicted for CMS0949 by TMHMM2.0 at aa 15-37, 54-73 and 77-99" gene complement(992130..993020) /locus_tag="CMS_0950" /old_locus_tag="CMS0950" /db_xref="GeneID:6156858" CDS complement(992130..993020) /locus_tag="CMS_0950" /old_locus_tag="CMS0950" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709697.1" /db_xref="GI:170781365" /db_xref="GeneID:6156858" /translation="MSVTTWDAVPLDTVRSEHAEAPLWDEARGTLLWADQYVGIVREA AFDTVTFAVGPVTETHVGGPVGAVVRHADGGHVLAARDGFVRLTAEGALIPVVDVLPA DGIRRRMNDGEVDPRGRLWAGSMAFDKTLGAGALYLLDRGRATTVLEGVTISNGTAFS SDGTEMLYIDTTTQQVRRFRVTEEGGLADPEVVVEIDPADGHPDGMCVDDEGFLWVAL WGGSEVRRYSPAGEHVGSVRVDAPQVSSCALVGPARDVLVITTSQEGYSEEDSARHPR AGMLFAVRPGVTGPAASAYA" misc_feature complement(992133..992990) /locus_tag="CMS_0950" /old_locus_tag="CMS0950" /inference="protein motif:HMMPfam:PF03758" /note="HMMPfam hit to PF03758, Senescence marker protein-30 (SMP-30), score 3.1e-70" gene complement(993017..993811) /locus_tag="CMS_0951" /old_locus_tag="CMS0951" /db_xref="GeneID:6156859" CDS complement(993017..993811) /locus_tag="CMS_0951" /old_locus_tag="CMS0951" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709698.1" /db_xref="GI:170781366" /db_xref="GeneID:6156859" /translation="MLIDLHDRVVVISGAAQGIGRAIAERFLEEGCRVFGLDLRFRDA LPEGITAIVADVTDQASVQAAIAQVVDAADRIDVLVNNAGINVEGPVETLDPARFQAA FDVNVGGVFLLSQAVIPVMKAGGGGRIINAASFAAVIPSVGAAAYGASKAAVVQFTRV LASELGPWGITVNAYAPGMIPTAMNGFAEMPEPAQDRLLDTLSIRRWERPDDVADLLV FLASDRAGYITGTLVDVSGGKLATQMPQRAYEGEGAPERGPRDGTR" misc_feature complement(993095..993784) /locus_tag="CMS_0951" /old_locus_tag="CMS0951" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 3.4e-75" misc_feature complement(993326..993412) /locus_tag="CMS_0951" /old_locus_tag="CMS0951" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 993871..994647 /locus_tag="CMS_0952" /old_locus_tag="CMS0952" /db_xref="GeneID:6156860" CDS 993871..994647 /locus_tag="CMS_0952" /old_locus_tag="CMS0952" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709699.1" /db_xref="GI:170781367" /db_xref="GeneID:6156860" /translation="MSGSRTHDDDHDGAAPGEGSAGPRTLWVSGAGSGVGRATAVAAA RDGWHLVLSGRHRDALDETRALVEAAGSTAEVAPLDVTDDAALDAVVAGLDRLDGVVV AAGLNAPRRSWAEQDVADFDRIVATNLTGPAHQVAAALPLLRASGGTVVLVSSYAAWT HSPGAGVAYSASKTALGALVRDLNAQEAGSGIRATHLCPGTIDSDFLALRPTVPDAAE RAAMLTPDDVARAAMFVLASPPHVRIDELVLSPMSQRGGF" misc_feature 993946..994629 /locus_tag="CMS_0952" /old_locus_tag="CMS0952" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.3e-30" gene complement(994667..995458) /locus_tag="CMS_0953" /old_locus_tag="CMS0953" /db_xref="GeneID:6156861" CDS complement(994667..995458) /locus_tag="CMS_0953" /old_locus_tag="CMS0953" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709700.1" /db_xref="GI:170781368" /db_xref="GeneID:6156861" /translation="MIHAEPEAPEPEPVSIPEPRVADGPDAHRDAARLLALWRERWAE PYPPYSGWYMPGIRFHTLPWSIQDARQARDRRSARRRYGSIVTTLEALSGSRGTMVLE LWRGGVGESDTVLPGLLPWATFTEPSATTPEDIADWTRTFRIRVGRPSLDDLCDLGHR EQGRYCLIAEDMSWTVHCYDGGIDISMLDESIERPLAEAHARWLPPDSWVAGHRWMRP STPGDLRRKAKVARRLEMLNARWQKRRAHEEALGLWDDVDEDLED" gene 995609..997030 /gene="glpT" /locus_tag="CMS_0954" /old_locus_tag="CMS0954" /db_xref="GeneID:6156862" CDS 995609..997030 /gene="glpT" /locus_tag="CMS_0954" /old_locus_tag="CMS0954" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate transporter" /protein_id="YP_001709701.1" /db_xref="GI:170781369" /db_xref="GeneID:6156862" /translation="MTTDQRTRPDGAAVRRGLLAFMAAPPPAPRLDDATVARRYPRLR LQVFMGIFIGYAAYYLIRNNVPLVATILRDENGFSALGLGILTNGVLLAYGFSKFLSA IVSDRSSARWFLPIGLLLSAFANLVVAFVPAVGASVALFAVVMIVNGFFQGMGWPPSG RTLVHWFSTSERGGKTAIWNVAHNVGGAGAGGLAGLAIATFGTWQSAFWFPAIVCIVI ALVAFVLLRDTPESEGLPPIEEHRHDPAPVETDAADEGASTWTTIRRYVIGNRTMVNL ALANVFVYTLRYGVLVWAPIYLADVRGASLGEGIAGFLLFELAGIPGTLLCGYISDKV FRGRRSPTGILFMAAVGLAVAIYWLSPADGPLWVSLAALVLIGGLIYGPVMLIGLQAL DLSPRKVAGTAAGFTGLFGYVLGATLASTGIGASVHAFGWDVTFVLILVCVVLAIVLL AIVGKDESALRRRREERGDIAAR" misc_feature order(995735..995794,995837..995905,995942..996010, 996020..996088,996149..996217,996227..996286, 996422..996490,996533..996601,996635..996688, 996716..996784,996821..996889,996902..996970) /gene="glpT" /locus_tag="CMS_0954" /old_locus_tag="CMS0954" /note="12 probable transmembrane helices predicted for CMS0954 by TMHMM2.0 at aa 43-62, 77-99, 112-134, 138-160,181-203, 207-226, 272-294, 309-331, 343-360, 370-392,405-427 and 432-454" misc_feature 995759..996892 /gene="glpT" /locus_tag="CMS_0954" /old_locus_tag="CMS0954" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 996119..996169 /gene="glpT" /locus_tag="CMS_0954" /old_locus_tag="CMS0954" /note="PS00942 glpT family of transporters signature." gene complement(997067..997429) /locus_tag="CMS_0955" /old_locus_tag="CMS0955" /pseudo /db_xref="GeneID:6158725" gene 997621..998301 /locus_tag="CMS_0956" /old_locus_tag="CMS0956" /db_xref="GeneID:6156863" CDS 997621..998301 /locus_tag="CMS_0956" /old_locus_tag="CMS0956" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709702.1" /db_xref="GI:170781370" /db_xref="GeneID:6156863" /translation="MHSHLRSPSTHRSSRRTSARQRIPLPLITIVGAGAGLGLGIARA SGREGFAATLVSRDQAKLDSRAATLGGGGVTARGFAADIRDAASVTRALDAVVAALGP IDVLEFSPADTSLESVDVLEVTPANPQPQIDLYLGGALTAVGHVLPGMIEAGRGTVLV TTGGGSISPLPFLGNVNIAAPSRPRTCLCALARTGPRKHLWCWRTRLDPRPRIGVARC ATTTGEPA" gene complement(998635..999384) /locus_tag="CMS_0957" /old_locus_tag="CMS0957" /db_xref="GeneID:6156864" CDS complement(998635..999384) /locus_tag="CMS_0957" /old_locus_tag="CMS0957" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001709703.1" /db_xref="GI:170781371" /db_xref="GeneID:6156864" /translation="MTATDPTAAAGSAPALARVRVLLVDDQALVRAGFRVILESEDGI EVVGEAADGEEGVRLAGALAPDVICMDVQMPRVDGLEATRRIVADPAIRAGVLMLTTF DREDYLFTALDAGASGFVLKSASPESLVEAVHVISRGDALLSPDVTRRVIDRFGRGSG ASDDDEATPTPAPTIPTDPRVATLTDRELEVLRLLAEGLANAEIAERLYLGEATVKTH VSRLLLKLGVRDRVQAVVFAYERGIVVPGAS" misc_feature complement(998671..998844) /locus_tag="CMS_0957" /old_locus_tag="CMS0957" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2.2e-24" misc_feature complement(998710..998793) /locus_tag="CMS_0957" /old_locus_tag="CMS0957" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature complement(998962..999330) /locus_tag="CMS_0957" /old_locus_tag="CMS0957" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 4.2e-33" gene complement(999381..1000817) /locus_tag="CMS_0958" /old_locus_tag="CMS0958" /db_xref="GeneID:6156865" CDS complement(999381..1000817) /locus_tag="CMS_0958" /old_locus_tag="CMS0958" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001709704.1" /db_xref="GI:170781372" /db_xref="GeneID:6156865" /translation="MRCTQPRRYGGRVSAASAPESVGRFWIRPRPDRAGFRFDALLAV VMLVLTTFSVMLYHAIGMYPSRPPIWVVIGWIVLMTAPLAARRLQPEAVTLVVSAVFI IGAYQFVPEVLFSNIAMFIAMYSQGAWGRSRVRSNVVRGIVVVGMFTWLFTELLRTSG YHSLSSSSFEDAPTDAWVPAPVAAGLISIITNLLYFGGAWYFGDRAWASARDRCALEV RTAELATERERVADQAVTLERVRIARELHDVVAHHVSVMGVHAGAARRVLDRDTAKAA ASLGIVEDNARSAIEELHRMLVALRQHDDGTGSDDVGAGGDETRTASTRGVDQLHELV ADACGAGLTVAYDIIGTPRPLPPTVDLIVYRVAQESLTNVRKHAGTGARVDLRLRYLA DRVEVEVSDAGPGGATSAPGGDGPGGLGQRGMRERVAAVGGSIEMGPKARGGYLVRAS LPTRRAPVATPVPLPEPIAASVPEGTRA" misc_feature complement(999456..999746) /locus_tag="CMS_0958" /old_locus_tag="CMS0958" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 3.4e-14" misc_feature complement(999903..1000106) /locus_tag="CMS_0958" /old_locus_tag="CMS0958" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature complement(order(1000209..1000277,1000350..1000409, 1000428..1000481,1000491..1000544,1000563..1000619, 1000632..1000700)) /locus_tag="CMS_0958" /old_locus_tag="CMS0958" /note="6 probable transmembrane helices predicted for CMS0958 by TMHMM2.0 at aa 40-62, 67-85, 92-109, 113-130,137-156 and 181-203" gene complement(1000866..1002945) /locus_tag="CMS_0959" /old_locus_tag="CMS0959" /pseudo /db_xref="GeneID:6156866" misc_feature complement(1001643..1001738) /locus_tag="CMS_0959" /old_locus_tag="CMS0959" /inference="protein motif:HMMPfam:PF01839" /note="HMMPfam hit to PF01839, Integrins alpha chain,score 0.0041" /pseudo misc_feature complement(1002081..1002182) /locus_tag="CMS_0959" /old_locus_tag="CMS0959" /inference="protein motif:HMMPfam:PF01839" /note="HMMPfam hit to PF01839, Integrins alpha chain,score 0.00012" /pseudo misc_feature complement(1002721) /locus_tag="CMS_0959" /old_locus_tag="CMS0959" /note="limit of DNA match with upstream gene" /pseudo gene complement(1002942..1004912) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /db_xref="GeneID:6156867" CDS complement(1002942..1004912) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /note="Similarity to downstream CDS suggests tandem duplication." /codon_start=1 /transl_table=11 /product="putative secreted glycosyl hydrolase" /protein_id="YP_001709705.1" /db_xref="GI:170781373" /db_xref="GeneID:6156867" /translation="MSRRARRSPFRPALLAVLVAGALGAVPLPSAVATPGSAAPVVTA TATAATRQMERLGRAPEAALVPNGVHLSWRMLGTDPDAIAFTVYRDGIRITPTPLTSA NDLTDPNGRPTSHYEVRSVVGGVEARVTGSFGVRTAPYTSVPLDRPSGGVTPAGERYE YSANDTSVGDADGDGTYELFVKWDPSDSKDNGQAGYTGPVLLDAYRMDGTRLWRIALG PNVRAGAHYTQFQVYDYDGDGRAEVVMKTADGTVDGRGTVIRDGRADHRNARGYVLSG AEYLTVFSGLTGAAIDTVPYDPPRGDVASWGDSYGNRVDRFLAATAYLDGSHPSIVMT RGYYARTALAAYDFDGRHLVQRWLLDSSTPGNAAAAGEGNHNLAVADVDGDGRDEILF GSMTVDDDGHLLYSTKLGHGDAIHVGDLVPGNPGLEAFAVHEIMGQSGNRAATMRDAA TGRILWSIPGNQDTGFGLTADVDPRYPGSESWAYGAGPDGKPQAQLRAADGRLITDAI PDSRFAVFWDGDLLREQLGGAFDPASAAAVPVISKWNWTTRNRDVLLTATGALTDNST KVNPMLQADLLGDWREEVVVRSADSHELRIYSTTDPTSTRLRTFMQDPTYRLGVAWQN TGYNMPPQPSYFVGAGMGTPPVPRIRLAGPGS" sig_peptide complement(1002942..1003079) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /note="Signal peptide predicted for CMS0960 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.402 between residues 46 and 47" misc_feature complement(1003122..1003214) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /inference="protein motif:HMMPfam:PF01839" /note="HMMPfam hit to PF01839, Integrins alpha chain,score 0.017" misc_feature complement(1003701..1003796) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /inference="protein motif:HMMPfam:PF01839" /note="HMMPfam hit to PF01839, Integrins alpha chain,score 0.0035" misc_feature complement(1004136..1004237) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /inference="protein motif:HMMPfam:PF01839" /note="HMMPfam hit to PF01839, Integrins alpha chain,score 0.00024" misc_feature complement(1004772) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /note="limit of DNA match with downstream gene" misc_feature complement(1004808..1004876) /locus_tag="CMS_0960" /old_locus_tag="CMS0960" /note="1 probable transmembrane helix predicted for CMS0960 by TMHMM2.0 at aa 13-35" gene 1005353..1006888 /locus_tag="CMS_0961" /old_locus_tag="CMS0961" /db_xref="GeneID:6156868" CDS 1005353..1006888 /locus_tag="CMS_0961" /old_locus_tag="CMS0961" /codon_start=1 /transl_table=11 /product="putative drug efflux protein" /protein_id="YP_001709706.1" /db_xref="GI:170781374" /db_xref="GeneID:6156868" /translation="MTGRPAAPVVSRRAWQALIVLLAGMFIALLDTTIVNVALPTIRT SLDASESTLSWIISGYALAFGLALIPAGRLGDRYGHKWVFVTGIALFTLASLACGVAQ DDLQLVIARVVQGLAGGLFVPAVTAFIQLLFPPQARGKAFAIMGAVIGVSSALGPIVG GLIIQAAGEESGWRLVFFVNLPVGLATVIAAIFLLPSRQVAEQVAGDVRAQSGQRGGA NQGAAAPAKAPAPSGVDLVGILLVSAGLVALLVPLIDGQDQGWPLWTYLSLAGGVVLL ALFGAWEVLQTRRSKGVLVPPHLFTHPAFTGGVILAMVYFAAFTSIFFTISILWQSGL GNSALESGLVSIPFAIGSIVGSSQSNRLTNRLGRTVLVIGTALVSVGLIWLWLVLLNT AAADLNSWMLLVPLLLAGIGNGLFIAPNAQFIVATVDPAEAGAASGVIGTVQRVGSAV GIAVIGSVLFAGVAGAGIQGPQMVPQAFTDASASAMGVSAIFAVVAFALVFALPRRVS RGH" sig_peptide 1005353..1005463 /locus_tag="CMS_0961" /old_locus_tag="CMS0961" /note="Signal peptide predicted for CMS0961 by SignalP 2.0 HMM (Signal peptide probability 0.893) with cleavage site probability 0.774 between residues 37 and 38" misc_feature order(1005395..1005463,1005500..1005568,1005596..1005652, 1005671..1005739,1005776..1005844,1005878..1005937, 1006058..1006111,1006130..1006198,1006274..1006342, 1006448..1006516,1006559..1006627,1006688..1006756, 1006793..1006861) /locus_tag="CMS_0961" /old_locus_tag="CMS0961" /note="13 probable transmembrane helices predicted for CMS0961 by TMHMM2.0 at aa 15-37, 50-72, 82-100, 107-129,142-164, 176-195, 236-253, 260-282, 308-330, 366-388,403-425, 446-468 and 481-503" misc_feature 1005413..1006732 /locus_tag="CMS_0961" /old_locus_tag="CMS0961" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1006986..1007429 /locus_tag="CMS_0962" /old_locus_tag="CMS0962" /db_xref="GeneID:6156869" CDS 1006986..1007429 /locus_tag="CMS_0962" /old_locus_tag="CMS0962" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709707.1" /db_xref="GI:170781375" /db_xref="GeneID:6156869" /translation="MSTAGVRCASVIRMTLYISCPVASVERAAAFYAALGWTRDEAMS GPDSACFAIAPDLRIMLLGRDVYASVGGVEQLIGGPDTPSKVTLSFDLGSRVAVDELV ERARAAGGRIGDTDEYPAMYQRQFDDLDGYHYSPFWVHPDVDPAG" gene complement(1007426..1008643) /locus_tag="CMS_0963" /old_locus_tag="CMS0963" /db_xref="GeneID:6156870" CDS complement(1007426..1008643) /locus_tag="CMS_0963" /old_locus_tag="CMS0963" /note="C-terminal region matches No N-terminal matches. Non-heme chloroperoxidase from Pseudomonas fluorescens UniProt:PRXC_PSEFL (EMBL:AF031153)." /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709708.1" /db_xref="GI:170781376" /db_xref="GeneID:6156870" /translation="MIGELVVAVRAVAPAGCGHDRAPRSGGGRRRALLEHAQPRDVHR IRVAARPVCPTPQLGQLRALGRRRPGVRVRGLVGIHLPILSPRATGDRPTGPPGDGPL RRPSGDRAWSPVDRAPTLSPCSPRRICGSPTAARCTATTRGPATAPTSWSSTTAGTPN VGPPPAPLVEAPAGRGIRWISYDRPGYGGSTRHPGRTVADTAADDAALADALGVERFA VLGHSSGAVLALATAAALPARVLGALSVSPLAPVAAEGIDWFAGMHAGGERELRAAVA GREALEEELAASTFDPAMFTDGDLRALETDWAWLDGVASHGLDAGPGGMVDDDLALVA DWGVDLADATAPVILLHGDADRIAPVAHARWLADRVAGVELVVRPGDGHISVLRGAAD ALARLRERIAETA" misc_feature complement(1007447..1008115) /locus_tag="CMS_0963" /old_locus_tag="CMS0963" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 7e-15" gene 1008706..1009152 /locus_tag="CMS_0964" /old_locus_tag="CMS0964" /db_xref="GeneID:6156871" CDS 1008706..1009152 /locus_tag="CMS_0964" /old_locus_tag="CMS0964" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709709.1" /db_xref="GI:170781377" /db_xref="GeneID:6156871" /translation="MAVALTAVVVSAVTAPAGREVAVVRFDPDQPLPVYMRDYFGGAE TGSARFHGLTLVRLENDRSAYPHVRGECLSVQPSRAALESTMGGGCAAGAIGASAQFL VNFGAPEELRDVYPVGTALLFDLRGDAVHVRVDESSRVPSPTRPPR" sig_peptide 1008706..1008762 /locus_tag="CMS_0964" /old_locus_tag="CMS0964" /note="Signal peptide predicted for CMS0964 by SignalP 2.0 HMM (Signal peptide probability 0.810) with cleavage site probability 0.477 between residues 19 and 20" gene complement(1009194..1010627) /gene="crtI" /locus_tag="CMS_0965" /old_locus_tag="CMS0965" /db_xref="GeneID:6156872" CDS complement(1009194..1010627) /gene="crtI" /locus_tag="CMS_0965" /old_locus_tag="CMS0965" /EC_number="1.14.99.-" /codon_start=1 /transl_table=11 /product="putative phytoene dehydrogenase" /protein_id="YP_001709710.1" /db_xref="GI:170781378" /db_xref="GeneID:6156872" /translation="MSRIVVVGGGMGGLTASALLAHAGHRVTLLEASPELGGKSRRIH LGEDRIDTGPSLVTFPAVWDELLRRLGDGERAPERTRDAGRLDLVRMAEVGRYYFDGE ETSLPVAPDHPWYPAWRRFSDIHAPLADDVTELLLADPLDRAALPALRRLLDVYGSRL TTRAYLDGLPWLPDGLREIIAIHTLNAGVSPARTPALYASMPAIMAETGAWVPRGGVY EIVLALGRLAEAAGVEIRTGEAVTRIERGSVTTDAGRYPADLVVSALDADRLATLTGP SRIPTLPRLRPRTLSRSGIALYGALREELPAGIATHSVVLPTKPAALHRSLEAGDEPA DTMVFVNQYRAGEVYPNPRSTVGILLTAPADGGRYTAEHPFVRREVDRVSSAMGLDGP LTDLLDEQTVLDPRYYGEGGEPHGALYGAARPPWLSGPFHRPSYNDPWRPWLWRVGAS VHPGGGIPAVVGGAMIAVTRLLKSHRA" sig_peptide complement(1009194..1009262) /gene="crtI" /locus_tag="CMS_0965" /old_locus_tag="CMS0965" /note="Signal peptide predicted for CMS0965 by SignalP 2.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.830 between residues 23 and 24" gene complement(1010624..1011520) /gene="ubiA" /locus_tag="CMS_0966" /old_locus_tag="CMS0966" /db_xref="GeneID:6158643" CDS complement(1010624..1011520) /gene="ubiA" /locus_tag="CMS_0966" /old_locus_tag="CMS0966" /note="UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin" /codon_start=1 /transl_table=11 /product="prenyltransferase" /protein_id="YP_001709711.1" /db_xref="GI:170781379" /db_xref="GeneID:6158643" /translation="MTDGSERMSRIAPSGIGVAMRRLVLISRPVLWINTIGSGLVAVW LTGALFDMRALPLILWLTLPFNLLIYGVNDIYDQDTDAANPRKGSIEGARIRPSEVRL IAWAVATVNVPFLVYFLLVLPPLANAAILLYAGVFVFYSAPPLRFKARPFLDSLSNAA YALPLVIVPAALGVAPVWPAVLGLMAWSVAKHAFDAVQDIVEDREAGITTSAVRLGSR GTALWSGAWWILSAALFAVVSVPVAAVDLLIAGILVVRLLRDPRPETGHRLYRLSVAF PYIAGTLPGVLLMVAIVFGGYP" misc_feature complement(order(1010633..1010701,1010759..1010827, 1010975..1011043,1011080..1011148,1011158..1011217, 1011293..1011361,1011374..1011433)) /gene="ubiA" /locus_tag="CMS_0966" /old_locus_tag="CMS0966" /note="7 probable transmembrane helices predicted for CMS0966 by TMHMM2.0 at aa 30-49, 54-76, 102-121, 125-147,160-182, 232-254 and 274-296" misc_feature complement(1010645..1011427) /gene="ubiA" /locus_tag="CMS_0966" /old_locus_tag="CMS0966" /inference="protein motif:HMMPfam:PF01040" /note="HMMPfam hit to PF01040, UbiA prenyltransferase,score 1.8e-05" gene 1011587..1012783 /locus_tag="CMS_0967" /old_locus_tag="CMS0967" /db_xref="GeneID:6158642" CDS 1011587..1012783 /locus_tag="CMS_0967" /old_locus_tag="CMS0967" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709712.1" /db_xref="GI:170781380" /db_xref="GeneID:6158642" /translation="MRMMLLTAGTRGDVEPFVALVRHAASRGHEVRLALPDDAVAPEG VDVVRLGLDARRVLSPAGRTPWALARHVRAEVRPAMRRMLAAAARETVAFDPDVVVHH PLILSAPMAADALGVPRVLVEFAPVVTPSDRFPAAGGPTATRDLGVRNRSTYAVPRAA GRLFAADVTRAAAELPGGRRPAGRTPSRATLMAVSPHLLPRPDDWPERVHQTGAWYEE APAASTDPVVGGFLGGGPVVVASFGSMTRGGASARGRAIVQAARAHGLRVLLVTGWGG LALPAECHGTDVLAVRSAPFDQVLPGAALAVHHGGAGTSHAVARAGVPAVVVPVTADQ PFWAAQLHRQGVAAAPIPLRRLSVDALVPAMGDALSRRERAAEVGGLMRRERGVRQAV DALESL" misc_feature 1011593..1011976 /locus_tag="CMS_0967" /old_locus_tag="CMS0967" /inference="protein motif:HMMPfam:PF03033" /note="HMMPfam hit to PF03033, Glycosyl transferase,family 28, score 0.00016" gene complement(1012837..1013550) /locus_tag="CMS_0968" /old_locus_tag="CMS0968" /db_xref="GeneID:6156873" CDS complement(1012837..1013550) /locus_tag="CMS_0968" /old_locus_tag="CMS0968" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709713.1" /db_xref="GI:170781381" /db_xref="GeneID:6156873" /translation="MDIQDQVALVTGANRGIGRTFVEELLERGARKVYATARRPETID IPGVEVLRLDLTDPASVSAAAEAAQDVTLLVNNAGISTGATLITGDMAEIRREMDTHF YGTLGVIRAFAPVLAANGGGGIVNILSALSWFSTRANGGYAAAKAAEWNMTNAVRLEL AAQGTLVQGVHLGAADTDIMAGYDGPMIAPRDVARASLDGVVAGSVEVVVDDWSRMVK DSLVGDPAPFYEKMRAILG" misc_feature complement(1012852..1013529) /locus_tag="CMS_0968" /old_locus_tag="CMS0968" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.1e-22" gene 1013623..1014162 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /db_xref="GeneID:6156874" CDS 1013623..1014162 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /note="Contains TITITITITITITITITIT repeat at N-terminus." /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001709714.1" /db_xref="GI:170781382" /db_xref="GeneID:6156874" /translation="MKGKSARRIDGNTITITITITITITITITITREEGGMLRIGDVA GRAGVSTRALRYYEEQGLLPAERTTSGQRVYPEAAVERVQLIQQLFAAGLPSRTIRQL LPSVDSGVAAPESLALLRSERDRITAAIAELERAREELNRVIDICLHPTPEHCPALRE GAAAYAGAVAGATEEIIAA" misc_feature 1013656..1013715 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /note="1 probable transmembrane helix predicted for CMS0969 by TMHMM2.0 at aa 12-31" misc_feature 1013734..1013799 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /note="Predicted helix-turn-helix motif with score 1490.000, SD 4.26 at aa 38-59, sequence LRIGDVAGRAGVSTRALRYYEE" misc_feature 1013737..1013847 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 1.2e-12" misc_feature 1013743..1013811 /locus_tag="CMS_0969" /old_locus_tag="CMS0969" /note="PS00552 Bacterial regulatory proteins, merR family signature." gene 1014413..1014823 /locus_tag="CMS_0970" /old_locus_tag="CMS0970" /db_xref="GeneID:6156875" CDS 1014413..1014823 /locus_tag="CMS_0970" /old_locus_tag="CMS0970" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709715.1" /db_xref="GI:170781383" /db_xref="GeneID:6156875" /translation="MVVGLLARGVVDESFVRDFWTGPPAAGIFALIGAGLAYGAATVA ARVSRRSAERQEWWDRAKWALDLVMSSDEADREVGLAAIEVLVAEATTTEAEMIDAVT SSSRLDEERRSSAVSASGVHPPEVDTIPTRVDNG" misc_feature 1014470..1014538 /locus_tag="CMS_0970" /old_locus_tag="CMS0970" /note="1 probable transmembrane helix predicted for CMS0970 by TMHMM2.0 at aa 20-42" gene 1014816..1015016 /locus_tag="CMS_0971" /old_locus_tag="CMS0971" /db_xref="GeneID:6156876" CDS 1014816..1015016 /locus_tag="CMS_0971" /old_locus_tag="CMS0971" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709716.1" /db_xref="GI:170781384" /db_xref="GeneID:6156876" /translation="MDEGGTAMTMEQRNPSPSALEKRIQAGEADPISDAERASAARIR IMVDKKRGRKTEDWIKKLATSA" gene complement(1015124..1015438) /locus_tag="CMS_0972" /old_locus_tag="CMS0972" /db_xref="GeneID:6156877" CDS complement(1015124..1015438) /locus_tag="CMS_0972" /old_locus_tag="CMS0972" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709717.1" /db_xref="GI:170781385" /db_xref="GeneID:6156877" /translation="MATRHGIGSRVPESEIAAMDADPPAWLAQSRANATGKRPVWVQL TCEVCGFTEAVRPKKWWPEFSYLSCERHSPDELPEPALGLARREVDGIGSRFVGVADE RA" gene 1015644..1016111 /locus_tag="CMS_0973" /old_locus_tag="CMS0973" /db_xref="GeneID:6156878" CDS 1015644..1016111 /locus_tag="CMS_0973" /old_locus_tag="CMS0973" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001709718.1" /db_xref="GI:170781386" /db_xref="GeneID:6156878" /translation="MCFSLYTASRSTTQAYRALLAPWGLTYPQYLVLVLLWSGDDRTV TEFGQQLDLDSGTLSPLLARMEEAGFITRRRISADQRVVTVSLAERGRTVRAELAHVP AAIIRGMGLDLDRARQLLTALHLLTAGMQETAAEALAEPAIRPADASARAGTP" misc_feature 1015716..1016021 /locus_tag="CMS_0973" /old_locus_tag="CMS0973" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.6e-18" gene 1016172..1016594 /locus_tag="CMS_0974" /old_locus_tag="CMS0974" /db_xref="GeneID:6156879" CDS 1016172..1016594 /locus_tag="CMS_0974" /old_locus_tag="CMS0974" /codon_start=1 /transl_table=11 /product="putative hydroperoxide resistance protein" /protein_id="YP_001709719.1" /db_xref="GI:170781387" /db_xref="GeneID:6156879" /translation="MDALYTAEALATGAGRDGRVAVSYSDLALDLSIPKEMGGSGEGA NPEQLFAAGYAACFHSALQGVARARKVKIADSSVGSRVSIGSNGQGGYQLAVHLEVVI PGVEHDLAQELADQAHQVCPYSNATRGNIEVTVTVSDD" misc_feature 1016196..1016585 /locus_tag="CMS_0974" /old_locus_tag="CMS0974" /inference="protein motif:HMMPfam:PF02566" /note="HMMPfam hit to PF02566, OsmC-like protein, score 1.8e-37" gene 1016594..1017001 /locus_tag="CMS_0975" /old_locus_tag="CMS0975" /db_xref="GeneID:6156880" CDS 1016594..1017001 /locus_tag="CMS_0975" /old_locus_tag="CMS0975" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709720.1" /db_xref="GI:170781388" /db_xref="GeneID:6156880" /translation="MAGVVRTSFPRTAGRVVLGSFLAFAGISHLTVARDEFRAQVPKS LPVPEDVTVSGSGVAEITLGSALLFARSRRGLAGWAAAAFFTAIFPGNIAQYVHKRDG FGLDTDGKRLGRLFFQPVLIAVALWSTGALKKR" misc_feature order(1016630..1016689,1016732..1016800,1016819..1016887, 1016930..1016989) /locus_tag="CMS_0975" /old_locus_tag="CMS0975" /note="4 probable transmembrane helices predicted for CMS0975 by TMHMM2.0 at aa 13-32, 47-69, 76-98 and 113-132" gene complement(1017080..1017700) /locus_tag="CMS_0976" /old_locus_tag="CMS0976" /db_xref="GeneID:6156881" CDS complement(1017080..1017700) /locus_tag="CMS_0976" /old_locus_tag="CMS0976" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709721.1" /db_xref="GI:170781389" /db_xref="GeneID:6156881" /translation="MTVPTAPSPFTSIDEIVPAGMGIHRIHSARFGPAEFNPGIGGPT RFAFFGEPVIPVLYAGDTEDVAVCETILHDVPLSGGVVGGREVVGRRCSRLIAIRDLR LASLVGGGPRALRVRADSVCATDAADYPQTVAWAAAAHAAGFEGLAYPSRQAAGRRAM VLFGDRVSPADLEPDPAYRWWFDDVDGFAKLYEMCRPLGVTVLRFA" gene complement(1017697..1018266) /locus_tag="CMS_0977" /old_locus_tag="CMS0977" /db_xref="GeneID:6156882" CDS complement(1017697..1018266) /locus_tag="CMS_0977" /old_locus_tag="CMS0977" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709722.1" /db_xref="GI:170781390" /db_xref="GeneID:6156882" /translation="MSALDPLQRSTLQAYSRAVAPGAPSDFELFIARQTAIYTETAAL SEVLARQAEPLPTGVVSSLNDTEVFWRDIEAEFGFLTSTEVSVALGARPTRAYASDLR TAGRILGLRRTNRYVYPGFQFHTGTVRPVIPRLIALGTEHELEARDVVAWLCRPTTYL RGEARRPVDRIDETSVILDAAARAWDVAW" gene 1018397..1018609 /locus_tag="CMS_0978" /old_locus_tag="CMS0978" /db_xref="GeneID:6156883" CDS 1018397..1018609 /locus_tag="CMS_0978" /old_locus_tag="CMS0978" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709723.1" /db_xref="GI:170781391" /db_xref="GeneID:6156883" /translation="MIMTDDEPEGLASSMMRDQYLYLVITGVVAIAFGALHPEQRVLG FVAGGAFVVVGGILLRWSLRRKRRGR" misc_feature order(1018454..1018507,1018517..1018585) /locus_tag="CMS_0978" /old_locus_tag="CMS0978" /note="2 probable transmembrane helices predicted for CMS0978 by TMHMM2.0 at aa 20-37 and 41-63" gene 1018697..1019128 /locus_tag="CMS_0979" /old_locus_tag="CMS0979" /db_xref="GeneID:6156884" CDS 1018697..1019128 /locus_tag="CMS_0979" /old_locus_tag="CMS0979" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709724.1" /db_xref="GI:170781392" /db_xref="GeneID:6156884" /translation="MPMIFVNLPVTDLPRAIAFYEAVGCAVNPDFTDEKAACLVVEAD RSAFMLLTRDFFQSFLDVPVGDPSSSAAAITAVMLDSREDVDARATAGLDAGGSEARP AVDLGFIYQRQLRDPDGNVLELGHMDPIPAGGIPAAGVSAA" gene complement(1019202..1020150) /locus_tag="CMS_0980" /old_locus_tag="CMS0980" /pseudo /db_xref="GeneID:6156885" misc_feature 1019232..1025766 /note="Insertion in Cms relative to Cmm. Typical GC content." repeat_region complement(1019239..1019956) /old_locus_tag="CMS0980" repeat_region complement(1020175..1020230) /note="8 x TCCCCg(Ct)" gene complement(1020287..1021195) /locus_tag="CMS_0981" /old_locus_tag="CMS0981" /db_xref="GeneID:6156886" CDS complement(1020287..1021195) /locus_tag="CMS_0981" /old_locus_tag="CMS0981" /note="possible secreted protein; Similarity with downstream CDS suggests tandem duplication." /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001709725.1" /db_xref="GI:170781393" /db_xref="GeneID:6156886" /translation="MRGATHDRDVARPPRAGAGSRWWRAVRGRASSLIAVAVVVIASL TVAAPARAVDFEARSETPIRAGSVITFYGGSGSGFAHPVDHHCTAGPVLVARGIISNF TEYLRAVRYVTIPVHCGVQGQKAYAGDVEIGAVSWESPDADLAVVRVEPSAVRVSQCY HTSSGPRCTIVTHYTPRAVGEVFVAVNRRGQELPLRVAGAKVPSDREVFCSSGMVTGV KCTWTTTPEPPGWRPTGPHELIARTSGGNVLNGDSGAPVVSQDAKIIGMVVGSGDDDG PYRTFMTYIPISYILQERSAFALATS" sig_peptide complement(1020287..1020457) /locus_tag="CMS_0981" /old_locus_tag="CMS0981" /note="Signal peptide predicted for CMS0981 by SignalP 2.0 HMM (Signal peptide probability 0.720) with cleavage site probability 0.235 between residues 57 and 58" repeat_region complement(1020324..1021040) /old_locus_tag="CMS0981" misc_feature complement(1021037..1021105) /locus_tag="CMS_0981" /old_locus_tag="CMS0981" /note="1 probable transmembrane helix predicted for CMS0981 by TMHMM2.0 at aa 31-53" gene complement(1021195..1021401) /locus_tag="CMS_0982" /old_locus_tag="CMS0982" /db_xref="GeneID:6156887" CDS complement(1021195..1021401) /locus_tag="CMS_0982" /old_locus_tag="CMS0982" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709726.1" /db_xref="GI:170781394" /db_xref="GeneID:6156887" /translation="METADAHVPRTLTCTYMHTYGRSTTDPLPVLPARRSAAPIMASR RRQAPEQALSSAAVPVASSASAAS" gene complement(1021450..1022295) /gene="lip" /locus_tag="CMS_0983" /old_locus_tag="CMS0983" /db_xref="GeneID:6156888" CDS complement(1021450..1022295) /gene="lip" /locus_tag="CMS_0983" /old_locus_tag="CMS0983" /EC_number="3.1.1.3" /codon_start=1 /transl_table=11 /product="putative secreted lipase" /protein_id="YP_001709727.1" /db_xref="GI:170781395" /db_xref="GeneID:6156888" /translation="MHVMPPPSRPGIAAVAALALVVALAAPTAAQAAVSHPANGRVDE VNVPRDAVTGFGGGTIFAPEVSGGARLGSVVVVPGFTDSQADMRWYGTDLAALGYVVF TIDTLATTGFPQRRAEETLAAADYLTGASAAKGEVDPARVSALGYSMGGGAVLEAAEA RHTLKAVVALMPFGLRTSYAADTTPSLIITGQNDRLAIPFLMGRRMYGSIAAPTPKQY LELRGADHGVGQRTPNPTILDAVTTFLQRYVDDDASAADRICPPPPATGAISASDSYC GPAGS" sig_peptide complement(1021450..1021545) /gene="lip" /locus_tag="CMS_0983" /old_locus_tag="CMS0983" /note="Signal peptide predicted for CMS0983 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.984 between residues 32 and 33" misc_feature complement(1022194..1022262) /gene="lip" /locus_tag="CMS_0983" /old_locus_tag="CMS0983" /note="1 probable transmembrane helix predicted for CMS0983 by TMHMM2.0 at aa 12-34" gene complement(1022475..1023767) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /db_xref="GeneID:6158793" CDS complement(1022475..1023767) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001709728.1" /db_xref="GI:170781396" /db_xref="GeneID:6158793" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATITGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature complement(1022496..1022954) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature complement(1022607..1022657) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /note="PS01043 Transposases, IS30 family, signature." misc_feature complement(1023576..1023641) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature complement(1023696..1023719) /locus_tag="CMS_0984" /old_locus_tag="CMS0984" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1023951..1024913) /locus_tag="CMS_0985" /old_locus_tag="CMS0985" /db_xref="GeneID:6156889" CDS complement(1023951..1024913) /locus_tag="CMS_0985" /old_locus_tag="CMS0985" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709729.1" /db_xref="GI:170781397" /db_xref="GeneID:6156889" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature complement(1023975..1024517) /locus_tag="CMS_0985" /old_locus_tag="CMS0985" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" misc_feature complement(1024776..1024841) /locus_tag="CMS_0985" /old_locus_tag="CMS0985" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(1025038..1025799) /locus_tag="CMS_0986" /old_locus_tag="CMS0986" /db_xref="GeneID:6156890" CDS complement(1025038..1025799) /locus_tag="CMS_0986" /old_locus_tag="CMS0986" /codon_start=1 /transl_table=11 /product="putative secreted lactone hydrolase" /protein_id="YP_001709730.1" /db_xref="GI:170781398" /db_xref="GeneID:6156890" /translation="MSSVLLPPVLVGVPCFSGAPWEFAPLTALAAHPTRTFRLPDDAA TVDEAADALEDAVADLPRYVLVGDSFGAVVSLALALRQPPGLAGPVLFGGFAADPTPA WKTRAAAIARHVPRVVYEQGVLRFHTAQLASPLDAAAPHPLTRRDYRELFLVNTPAAA YSARVGAVVGFDVRARLHRIDVPTLLLTPEDDRLVGPAAAAALRDGLPHARELVIPGT GHMLRFTHPERYADAVDAFVRAEVGTGVGVAAGTA" sig_peptide complement(1025038..1025127) /locus_tag="CMS_0986" /old_locus_tag="CMS0986" /note="Signal peptide predicted for CMS0986 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.991 between residues 30 and 31" gene complement(1025858..1026298) /locus_tag="CMS_0987" /old_locus_tag="CMS0987" /db_xref="GeneID:6156891" CDS complement(1025858..1026298) /locus_tag="CMS_0987" /old_locus_tag="CMS0987" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709731.1" /db_xref="GI:170781399" /db_xref="GeneID:6156891" /translation="MTDSGFSKDERDAMKQRARELREEAKLQKAADKQAAALQGVLDA FAAMAPEERAIAEWLHGIVLEHAPGLSPKTWYGFPAYADADGKPVVFFQPGSKFGTRY STLGFQDPAQLDEGTMWPTSYALTAVDPANEERVAALVRRAIGG" gene 1026404..1026673 /locus_tag="CMS_0988" /old_locus_tag="CMS0988" /db_xref="GeneID:6156892" CDS 1026404..1026673 /locus_tag="CMS_0988" /old_locus_tag="CMS0988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709732.1" /db_xref="GI:170781400" /db_xref="GeneID:6156892" /translation="MSTHEQDQPVMDGATEATADEKRAGLAEQVAYDHRDSGSDAMAA ELDRRTADAGLGDGPADPAATQATSTGSDGIDGEADAEVDGPHPA" gene 1026763..1027893 /locus_tag="CMS_0989" /old_locus_tag="CMS0989" /db_xref="GeneID:6156893" CDS 1026763..1027893 /locus_tag="CMS_0989" /old_locus_tag="CMS0989" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709733.1" /db_xref="GI:170781401" /db_xref="GeneID:6156893" /translation="MTENRATRVRTPAPAASPRSDGTGRTALVVGATGISGSALVDQL TAEGWDVLALSRRAGADRPGVRWISADLRSADDLRRALAGEQPSHVFFTAWSRQATEQ ENIDVNGGMVRDLLAALDGAPVEHAALVTGLKHYLGPFEAYGQGKMPDTPFHEEEERL DAPNFYYAQEDELFAAAARQGFAWSVHRSHTVIGHAVGNQMNMGLTLAVYGSICRDLG LPFVFPGSRTQRDGLTDVTDATVLADQMVWASTAEAGRDEAFNVVNGDVFRWRWMWPR LAAFFGVEAVGFQDAPRPLEQQMAGYEDEWARIAREAGLAESDLGRIASWWHTDADLG RDIEVVTDISKSRLAGFLTHHRTLDSFLGLFDRYRAEGLIPR" gene complement(1027880..1029193) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /db_xref="GeneID:6156894" CDS complement(1027880..1029193) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709734.1" /db_xref="GI:170781402" /db_xref="GeneID:6156894" /translation="MDGPVPVRRRLVGAVAGPARTGQAGRVTSSPDSPAPVASAGPTS AAERSLAPDLLRGIALLGIALANSVSFIVGRPTGPLGRPTDGTALDHVADVLVGTLVD NRAFPLFTMLFAYGFAVILRRQAAAGVDGPRARRLLLRRSAWLMVFGALHVVLLFDGD ILLSYGILGLALAALYRASDRVFRVLVWAPAIVFLVVAGADGLTGDDGSGSLLGGDGT FLGDLAGRAITLAGLVVATPVLVGSLVPLAAVGVLLGRRRVLEDPAAHLPLLRTLALV GMPVSVLGALPLVLAAVGAIAADPVALYLLGVLHGATGVGGALGLLGLVGWAVAARAR RGHPAPGPGLGALVAVGRRSMTCYLLQSVLFAILLEPWSLGLGVGAGTARIALIAIGV WLVTVAVSVALERAGRAGPAEWAIRRLAYGRPSAGPAPAQPVSAG" sig_peptide complement(1027880..1028014) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /note="Signal peptide predicted for CMS0990 by SignalP 2.0 HMM (Signal peptide probability 0.873) with cleavage site probability 0.341 between residues 45 and 46" misc_feature complement(1027925..1028434) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /inference="protein motif:HMMPfam:PF04235" /note="HMMPfam hit to PF04235, Protein of unknown function DUF418, score 6.4e-24" misc_feature complement(order(1027985..1028041,1028054..1028122, 1028207..1028275,1028303..1028371,1028432..1028500, 1028582..1028641,1028660..1028713,1028726..1028785, 1028831..1028884,1028975..1029034)) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /note="10 probable transmembrane helices predicted for CMS0990 by TMHMM2.0 at aa 54-73, 104-121, 137-156,161-178, 185-204, 232-254, 275-297, 307-329, 358-380 and 385-403" misc_feature complement(1028588..1029058) /locus_tag="CMS_0990" /old_locus_tag="CMS0990" /inference="protein motif:HMMPfam:PF04171" /note="HMMPfam hit to PF04171, Protein of unknown function DUF405, score 1.3e-26" gene 1029264..1030199 /locus_tag="CMS_0991" /old_locus_tag="CMS0991" /db_xref="GeneID:6156895" CDS 1029264..1030199 /locus_tag="CMS_0991" /old_locus_tag="CMS0991" /codon_start=1 /transl_table=11 /product="putative ABC transporter, ATP-binding subunit" /protein_id="YP_001709735.1" /db_xref="GI:170781403" /db_xref="GeneID:6156895" /translation="MTTAAVEEHVTVRDLEKTYGTTTALRGVSFDIHRGETFALLGPN GAGKSTTIEILEGYRLRTGGSATVLGVDPATGGRAWRARIGMVLQSSSESGAMTVREQ VAHFARMYPRPRDVDATIEAVGLTEKAGTLLRALSGGQRRRVDVALGIIGRPELLFLD EPTTGFDPEARHRFWDLIRGLKAEGTTILLTTHYLDEAAQLGDRAAVIAGGRLVAIGR LDEIGGEEARIPRVLWHDDDGIHDERTRTPGAFVAALSEATPGGEPRDLRIVQPSLED VYLGLLAEAGAAPAAGGPDAPTAAMPTASAEEVAA" misc_feature 1029366..1029896 /locus_tag="CMS_0991" /old_locus_tag="CMS0991" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.9e-51" misc_feature 1029387..1029410 /locus_tag="CMS_0991" /old_locus_tag="CMS0991" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1029669..1029713 /locus_tag="CMS_0991" /old_locus_tag="CMS0991" /note="PS00211 ABC transporters family signature." gene 1030196..1031059 /locus_tag="CMS_0992" /old_locus_tag="CMS0992" /db_xref="GeneID:6156896" CDS 1030196..1031059 /locus_tag="CMS_0992" /old_locus_tag="CMS0992" /codon_start=1 /transl_table=11 /product="putative integral membrane ABC transport protein" /protein_id="YP_001709736.1" /db_xref="GI:170781404" /db_xref="GeneID:6156896" /translation="MTAVRPARPAAVPAPVLPGVLPLGIHRVRYEVRRYFRQTDTIIF TFLFPVIMLSIFSVAFGSSGNLGTAPDGSGGVSAAAYYLPGMIAAGILLSGVQNLAVD IAMERSDGTLTRLAGSPLPVLSYFIGKGGQVIVTSLLQMLVLLLVARFAFGVELPTDA GRWATFAWVYALGITSSAVLGIALSRIPRSGASATAVITPIVLVLQFISGVYLTFTML PTWLQDVASFLPLKWMAQGMRAVFLPDALAAVERGGTWDLAGVAVVLAIWLVGGTIAA LATFRWIRRDS" misc_feature order(1030319..1030387,1030430..1030498,1030592..1030651, 1030679..1030747,1030781..1030849,1030967..1031035) /locus_tag="CMS_0992" /old_locus_tag="CMS0992" /note="6 probable transmembrane helices predicted for CMS0992 by TMHMM2.0 at aa 42-64, 79-101, 133-152, 162-184,196-218 and 258-280" misc_feature 1030520..1030939 /locus_tag="CMS_0992" /old_locus_tag="CMS0992" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 1.5e-08" gene 1031063..1032391 /locus_tag="CMS_0993" /old_locus_tag="CMS0993" /db_xref="GeneID:6156897" CDS 1031063..1032391 /locus_tag="CMS_0993" /old_locus_tag="CMS0993" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001709737.1" /db_xref="GI:170781405" /db_xref="GeneID:6156897" /translation="MRDDRAGWQAQGMIPVRTVHLAYGVTMAVLVVLAIGTGRDAGWG AWGAIAAMTALYLLVGRRALEASAAASATEARLPPEPSAVVFLALVIPAATWGVASLS TFAVVQCVLCPLVWLLLDRVRDAVIGTLVLTGSIAVGFVVGFGDLPGALPTMALSQGL SLGGTIALGLWITRIADLSRERLQLLEGLRAAQAQVEELGREAGTARERERLSADIHD TVAQDLTGLVMLAQRGRRELRGGATEAMDQTLAQLEAGARDALTQTRAIVAATAPVEL TDGLGQAIARLGARLERETGIPVEVRVDAGVGSVDRDAEVVLLRCAQEGLANVRRHAG ASAVELALDRDGGDVVLAIRDDGRGFDPARASGGYGLDGMRRRLDAAGGRLDVESGPG GTRLTARIPAHAASAASVAPSAAGASPVDPPLADPTPAPTRAAASARARA" misc_feature order(1031123..1031176,1031189..1031242,1031303..1031356, 1031366..1031419,1031438..1031497,1031510..1031578) /locus_tag="CMS_0993" /old_locus_tag="CMS0993" /note="6 probable transmembrane helices predicted for CMS0993 by TMHMM2.0 at aa 21-38, 43-60, 81-98, 102-119,126-145 and 150-172" misc_feature 1031684..1031890 /locus_tag="CMS_0993" /old_locus_tag="CMS0993" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature 1031999..1032271 /locus_tag="CMS_0993" /old_locus_tag="CMS0993" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 6.8e-19" gene 1032388..1033062 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /db_xref="GeneID:6156898" CDS 1032388..1033062 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001709738.1" /db_xref="GI:170781406" /db_xref="GeneID:6156898" /translation="MTPPRIRVAVVDDHPVVRAGLAALLASADDIDVVGQAADGEAAV DLALGERPDVVLMDLRMPGLDGVGATARIREEAPGVRVLVLTTYETDASILTAIEAGA SGYLLKAAPEEEILAGVRAVARGEVALAPGIAAALVRQVARPAAEPAGPTPTLSPRET QVLALVAGGRTNARIALELHVTPATVKTHLLHVFEKLGVGDRTRAVTLAMELGLLPPA AGPARG" misc_feature 1032403..1032768 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 3.5e-35" misc_feature 1032841..1033014 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2.5e-18" misc_feature 1032892..1032975 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature 1032895..1032960 /locus_tag="CMS_0994" /old_locus_tag="CMS0994" /note="Predicted helix-turn-helix motif with score 1167.000, SD 3.16 at aa 170-191, sequence RTNARIALELHVTPATVKTHLL" gene 1033371..1034513 /locus_tag="CMS_0995" /old_locus_tag="CMS0995" /db_xref="GeneID:6156899" CDS 1033371..1034513 /locus_tag="CMS_0995" /old_locus_tag="CMS0995" /codon_start=1 /transl_table=11 /product="putative sugar-binding transport protein" /protein_id="YP_001709739.1" /db_xref="GI:170781407" /db_xref="GeneID:6156899" /translation="MASGRNARKISSLLLLAGGAVGMTACAPQGATNTGAGDGGDAAA GTECNVGISMPTRSLERWINDGEGLKTKLEGDDCTVDLQYADNKTDAQISQIQNQVAG GAKILVVAAVDGKTLGPGLEDAKSQGVTVIAYDRLINGTDAVDYYATFDNYKVGTLQG EFIKDTLDLDNAAGPFTLEPFAGSPDDNNAGFFFGGAWDVLQPYVASGKLTVPSGKSP ATSADWQQIGILSWGSDDAQAEMDNRLQSFYTGGQKVQVVLSPNDSLALGIEASLSSA GYAPGADWPVITGQDADKANVQAILADKQSMTVWKDTRALGDQVQKMIGEIVKGDEVT VNDTKSYDNGNKVVPSFLLDPQVVVKDDVQKTLIDSGFLKASDVGL" misc_feature 1033509..1034438 /locus_tag="CMS_0995" /old_locus_tag="CMS0995" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.017" gene 1034636..1036180 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /db_xref="GeneID:6156900" CDS 1034636..1036180 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /codon_start=1 /transl_table=11 /product="putative sugar-transport ATP-binding protein" /protein_id="YP_001709740.1" /db_xref="GI:170781408" /db_xref="GeneID:6156900" /translation="MDDVILQMTGIVKEFTGVRALDGVDVTVRRGEVHAVCGENGAGK STLMKVLSGVYPHGSYEGTITIDGREVRYGSINDSERDGVVIIHQELALSPYLSIAEN IFLGNEKSRAGVIDWNRTNLETVKLLERVGLDENPATRVLELGVGKQQLVEIAKALSK EVKLLILDEPTAALNDDDSAHLLELIGQLRDQGITSIIISHKLNEIRAIADEVTVIRD GRTIETFPVTDTDEIETRIIRAMVGRPLDAQFPPRDPHIGAEKLRVEDWTVHHPVDVD RVVVDNASFSVRAGEVVGFAGLMGAGRTELAMSIFGRSYGTGISGRIFKDGKEIRTRT VSEAIKNGIAYATEDRKRYGLNLIGSITVNVSAAALSKLVRLGVIDRNREYAVADDYR KKMNIKTPDVASVVGKLSGGNQQKVVLSKWIYSGPDVLILDEPTRGIDVGAKYEIYSI INQLAAEGKAVIVISSELPELIGLSDRIYTIAEGRLTAEVSRADATQEELMRHMTASR KSGVDQ" misc_feature 1034726..1035292 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.6e-50" misc_feature 1034747..1034770 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1035503..1036087 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1e-18" misc_feature 1035860..1035904 /locus_tag="CMS_0996" /old_locus_tag="CMS0996" /note="PS00211 ABC transporters family signature." gene 1036177..1037385 /locus_tag="CMS_0997" /old_locus_tag="CMS0997" /db_xref="GeneID:6156901" CDS 1036177..1037385 /locus_tag="CMS_0997" /old_locus_tag="CMS0997" /codon_start=1 /transl_table=11 /product="putative sugar transport permease" /protein_id="YP_001709741.1" /db_xref="GI:170781409" /db_xref="GeneID:6156901" /translation="MTVMPEQATAPNVPTPDGVKKRPRRRIDLRQYGILAALAVIILL FQVLTEGRLLYPGNVANLIQQNAYVLILAMGMVIVIIAGHIDLSVGSVVATVGAVAAL SMNEWGLPWGTAVVLSLVVGALIGAWQGFWVAFVGIPAFIVTLAGMLVFRGVALVLLT GGTISGLPAEFNSIGSGNLPTTGAPDLLTLGIGALVSVGLVVQQLRTRATLRKLELPR ERAISFWIRTAIAVFAIMYLCYLLAYNRGTPIILIILATLVLLYSFLLTRTVFGRHVY AMGGNLFAAMMSGVKTRWVNFFIFVNMGLLAGLAGVVSTARAGSAVASAGQSFELDAI AAVFIGGAAVQGGVGTVVGAVIGGLVMGVLNQGLSILSVDAAWQQVIKGLVLLLAVAF DVYSKRRSGR" misc_feature order(1036261..1036320,1036363..1036431,1036435..1036488, 1036516..1036584,1036603..1036671,1036714..1036782, 1036843..1036911,1036924..1036992,1037050..1037118, 1037176..1037244) /locus_tag="CMS_0997" /old_locus_tag="CMS0997" /note="10 probable transmembrane helices predicted for CMS0997 by TMHMM2.0 at aa 29-48, 63-85, 87-104, 114-136,143-165, 180-202, 223-245, 250-272, 292-314 and 334-356" misc_feature 1036348..1037346 /locus_tag="CMS_0997" /old_locus_tag="CMS0997" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 1.4e-56" misc_feature 1036645..1036671 /locus_tag="CMS_0997" /old_locus_tag="CMS0997" /note="PS00144 Asparaginase / glutaminase active site signature 1." gene 1037452..1037784 /locus_tag="CMS_0998" /old_locus_tag="CMS0998" /db_xref="GeneID:6156902" CDS 1037452..1037784 /locus_tag="CMS_0998" /old_locus_tag="CMS0998" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709742.1" /db_xref="GI:170781410" /db_xref="GeneID:6156902" /translation="MGADRPLHDGSCHPRDMGYGPYDALSRDEVVARLADGWAWRISW CSGARSLDTHGVGPTLPAGILHCVPSPAKLRRGRLPGPRNWMLVVEREEDGRPVLLFD EGPEYRFV" gene complement(1037785..1038585) /locus_tag="CMS_0999" /old_locus_tag="CMS0999" /db_xref="GeneID:6156903" CDS complement(1037785..1038585) /locus_tag="CMS_0999" /old_locus_tag="CMS0999" /note="Possibly sortase sorted though no clear LPXTG motif" /codon_start=1 /transl_table=11 /product="putative signal peptidase" /protein_id="YP_001709743.1" /db_xref="GI:170781411" /db_xref="GeneID:6156903" /translation="MTRILPRRRARHGDALGRPADDLAPVELEAGTTPRGGVAQLARS AAVGLSVGILLLVIALAAVLLVVPKVSGSVPLTILTQSMEPTLPPGTLIVVRPVDPDA LEIGDVATYQIRSGDPAVITHRITAIASASDGTRSFTFQGDNNASPDSLPITPGQIQG EVWYSVPLVGWANQAVNGQARSWIIPAAAVALLAYAAVTIITGAVQTRRRRSASAAAD VVAEGDHVHSDAMSAGVAEAARADPSHPGVDGVPPSAPARPPRGRHRG" misc_feature complement(1037890..1037931) /locus_tag="CMS_0999" /old_locus_tag="CMS0999" /note="PS00761 Signal peptidases I signature 3." misc_feature complement(order(1037971..1038039,1038385..1038453)) /locus_tag="CMS_0999" /old_locus_tag="CMS0999" /note="2 probable transmembrane helices predicted for CMS0999 by TMHMM2.0 at aa 45-67 and 183-205" gene complement(1038611..1039513) /locus_tag="CMS_1000" /old_locus_tag="CMS1000" /db_xref="GeneID:6156904" CDS complement(1038611..1039513) /locus_tag="CMS_1000" /old_locus_tag="CMS1000" /note="threonine/alanine-rich" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709744.1" /db_xref="GI:170781412" /db_xref="GeneID:6156904" /translation="MNGTQRRPGRAHAALLVGLTVLLVGIGATAGHALWASSTSTSTN VQSATVAVTESGFDQLAGELTAQSPTRTAAVLVTNTGSTRASWTGTMTAPTSSTNDQY FARNVRVVAWTAVGSGCTANTSVGPDSATANWVVPPTLSGTLNPGACVIWCVRTTATA FPTAAAGVTATLTTVLGSGSWTGRDSSTAKQTTPAPTVTGGFSCQSTDGNWYVIVSWD VSGAPMDTWYGVIVNGKTIAMSQGSYGKATISGSQVPASLAADGTVKVRIDRLDANDQ SVGQVAGGTIVAFTQSGARGFRCS" sig_peptide complement(1038611..1038751) /locus_tag="CMS_1000" /old_locus_tag="CMS1000" /note="Signal peptide predicted for CMS1000 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.529 between residues 47 and 48" misc_feature complement(1038806..1038829) /locus_tag="CMS_1000" /old_locus_tag="CMS1000" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1039409..1039477) /locus_tag="CMS_1000" /old_locus_tag="CMS1000" /note="1 probable transmembrane helix predicted for CMS1000 by TMHMM2.0 at aa 13-35" gene complement(1039510..1040112) /locus_tag="CMS_1001" /old_locus_tag="CMS1001" /db_xref="GeneID:6156905" CDS complement(1039510..1040112) /locus_tag="CMS_1001" /old_locus_tag="CMS1001" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709745.1" /db_xref="GI:170781413" /db_xref="GeneID:6156905" /translation="MRRNEAPAPRPAHGRRSARQACRSPLRAAWLTTGLLTAVVVASL AATGGSYALWNDAASAQPASVTSGTPGLVVTQQSALDSSKLLPGQGAIGTFTAKNTGT VPLDVAVSSRGTSSNSAFLGKLSVRIGPVPSVASCVPDATTYSGRPGQLNAPSGFLRI QPGASAVVCSQVVLDQDAPQTVQGSTAQLAFALVGVQVQP" sig_peptide complement(1039510..1039689) /locus_tag="CMS_1001" /old_locus_tag="CMS1001" /note="Signal peptide predicted for CMS1001 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.706 between residues 60 and 61" misc_feature complement(1039969..1040037) /locus_tag="CMS_1001" /old_locus_tag="CMS1001" /note="1 probable transmembrane helix predicted for CMS1001 by TMHMM2.0 at aa 26-48" gene complement(1040204..1040749) /locus_tag="CMS_1002" /old_locus_tag="CMS1002" /db_xref="GeneID:6156906" CDS complement(1040204..1040749) /locus_tag="CMS_1002" /old_locus_tag="CMS1002" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709746.1" /db_xref="GI:170781414" /db_xref="GeneID:6156906" /translation="MNKIVSGAVAGAAGIVLLLGGAGSFALWNANATVAASSVSSGNL AIAADNAGVWTDITNGGSKVIDPATYRIVPGNVLQYTSALTVTATGDSLAADLTYNPV SITGNAALKAAITTKLDVTSTGASITPATAANTFTVKPSTAATKVNVVLTVTFPSTAT TGQNGTLSFDKLAFTLTQRAI" misc_feature complement(1040672..1040740) /locus_tag="CMS_1002" /old_locus_tag="CMS1002" /note="1 probable transmembrane helix predicted for CMS1002 by TMHMM2.0 at aa 37-59" gene 1041119..1042753 /locus_tag="CMS_1003" /old_locus_tag="CMS1003" /db_xref="GeneID:6156907" CDS 1041119..1042753 /locus_tag="CMS_1003" /old_locus_tag="CMS1003" /codon_start=1 /transl_table=11 /product="putative integral membrane two-component sensor kinase" /protein_id="YP_001709747.1" /db_xref="GI:170781415" /db_xref="GeneID:6156907" /translation="MPATRSTTDERRRRGATRAQIPFLLSCAVVAVIVALDAPSIQRD PWYAAAIALVLIGTVLAVVVAASRLPSALLILVPALDLLAVASIREATVATLPAVALL VIFPLLWLVFGFPTGGVPVAVAGALAITVLPVLRAGGLPATSAGWADLVGGLLLTSLL VAAAAQAAATLRRAQRDLAEATAAQTRLLAESREQTATIRDVADAVDVGIVFFDADDR PVIRNAAVRRLLELAGYDHETGMATSVYGSDRVTPVARDGKVLMEAVYADKVHGPVYW VGEPGDQRALVLSVRPIGHRPGQLTGTVLGAYDVTDLAQAVQVRDEFLATVSHELRTP LTSIVGYLDLLDELHDPAELGIADELAVIQRNVAQLSSIIGSLLEGADHAPALRRGTV DLTALVDAVVRPAAARATERGLVLEGRLEPGITLDGDADRLTQVVEALVANALLFTPS GRIDVVLAREGDDAVISVADTGVGLSEEDQRHAFDRFFRAQSARDGAVPGLGLGLSIA ERTVTAHGGTVRIASRLGHGTRVVATLPLGRDATGA" misc_feature order(1041179..1041232,1041260..1041328,1041389..1041457, 1041470..1041538,1041557..1041625) /locus_tag="CMS_1003" /old_locus_tag="CMS1003" /note="5 probable transmembrane helices predicted for CMS1003 by TMHMM2.0 at aa 54-71, 81-103, 124-146, 151-173 and 180-202" misc_feature 1042073..1042276 /locus_tag="CMS_1003" /old_locus_tag="CMS1003" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 1.5e-14" misc_feature 1042400..1042732 /locus_tag="CMS_1003" /old_locus_tag="CMS1003" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1.7e-38" gene 1042851..1044719 /locus_tag="CMS_1004" /old_locus_tag="CMS1004" /db_xref="GeneID:6156908" CDS 1042851..1044719 /locus_tag="CMS_1004" /old_locus_tag="CMS1004" /codon_start=1 /transl_table=11 /product="BCCT family transporter" /protein_id="YP_001709748.1" /db_xref="GI:170781416" /db_xref="GeneID:6156908" /translation="MPMPPSPQEPIPSMTSTRTTAERLLDRLVPKRRSGPDGTRPPRR DHSDHRLLEARFTGSVDLYEPEHPRIDRLVFGVTAVLAVGFVVWGIVSTDGLASVSGA AQSWVINQTGWLFVLAASFFVIFVLWLAASRYGRIKLGADDEKPQFKTVSWIAMMFSA GMGIGLMFFGAAEPLSFFVSPPPGTTQPESEAAIRTAMATAMFHWGLHPWAIYAVAGI AIGYGTFRKGRKQLFSSIFQPLLGTKRTEGWAGRVIDMLAIFATLFGSAASLGIGATQ IGAGLEFNGWVDEATAPLLIGIIVMLTIAFIFSAVSGIARGIQWLSNINMVLAVVLAV FVFVVGPTLLILNLIPATLGAYLGDMTEMASRTAATGGDEMSAWLSSWTVFYWAWWIS WTPFVGMFIARISRGRTIREFVVGVLLAPSIVALIWFSIFGGSAIHAQQTDGDMTIDG AVVSDNTLFQLLNHYPLASISTILVMLLVAIFFVSGADSASIVMGTLSQRGALHPSRK VVVFWGVVMGAVAAIMLAIGGGGTEALTGLQNLTVVASLPFVIVMLVACYALWKELRT DPLIVRRQVAVEMMRDAVVNGVEQHGDRFQLSVDPVEPEDAEIREPLGDEDEARRS" misc_feature order(1043067..1043126,1043169..1043237,1043298..1043366, 1043466..1043525,1043616..1043684,1043727..1043795, 1043829..1043897,1043997..1044056,1044093..1044161, 1044243..1044311,1044375..1044443,1044471..1044530) /locus_tag="CMS_1004" /old_locus_tag="CMS1004" /note="12 probable transmembrane helices predicted for CMS1004 by TMHMM2.0 at aa 73-92, 107-129, 150-172,206-225, 256-278, 293-315, 327-349, 383-402, 415-437,465-487, 509-531 and 541-560" misc_feature 1043070..1044551 /locus_tag="CMS_1004" /old_locus_tag="CMS1004" /inference="protein motif:HMMPfam:PF02028" /note="HMMPfam hit to PF02028, BCCT transporter, score 3.6e-227" misc_feature 1043991..1044020 /locus_tag="CMS_1004" /old_locus_tag="CMS1004" /note="PS01303 BCCT family of transporters signature." gene 1044844..1045860 /locus_tag="CMS_1005" /old_locus_tag="CMS1005" /db_xref="GeneID:6156909" CDS 1044844..1045860 /locus_tag="CMS_1005" /old_locus_tag="CMS1005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709749.1" /db_xref="GI:170781417" /db_xref="GeneID:6156909" /translation="MMTTSTPASAPSPASTDESRRRAAVVYNPIKVDLASLKTKVAQA AGAAGWQETLWYETSEDDPGRGAAEEALSHDVDMVIAAGGDGTVRAVAEGMSGSGVSL GLLPSGTGNLLARNLKLTLNDVEHSLEAAFSGRDRAVDLASIEILREDETRDKHVFVV MAGVGIDAKMLANTDSELKKKVGWLAYVDAIFKALRDRDQLRLCYRLDGRSVHRRRAH TLIVGNCGSLPANILLLPDAAVDDGILDVVLMRPEGILGWIQIWLKVARENGVVRRTA AGRRLMGPEKEVRALEYRTAEEVVVRLEKEEDIELDGDPFGRAVGFKIQVLPGGLTVR VPQN" misc_feature 1044907..1045284 /locus_tag="CMS_1005" /old_locus_tag="CMS1005" /inference="protein motif:HMMPfam:PF00781" /note="HMMPfam hit to PF00781, Diacylglycerol kinase,catalytic region, score 2.4e-20" gene 1045916..1047094 /locus_tag="CMS_1006" /old_locus_tag="CMS1006" /db_xref="GeneID:6156910" CDS 1045916..1047094 /locus_tag="CMS_1006" /old_locus_tag="CMS1006" /codon_start=1 /transl_table=11 /product="putative nucleotide-binding protein" /protein_id="YP_001709750.1" /db_xref="GI:170781418" /db_xref="GeneID:6156910" /translation="MIRTLAVSGYRSVRDLALPLTGLDVVTGANGSGKSNVYRALRLI ADMAQDGAVGALAREGGLEAVLWAGPEGISRAMRDGEHAVQGTMRKGPIALRLGFAGD DLGYLVDLGIPQRDPRALPPTMFGRDPEIKRELVFSGSVARPRSLVLERRWQDVRVRD EADGWTHVPAMVPAHLSVLSEVADAVTSPEAMILRRRMTGWRFYDHLRTDADAPARRP RVGTRTDVLASDGSDLAAAVQTIREWGRGDALDAMVDRAFPGSRIVIRSQDGVLSLGL EQPGILRVLDAPELSDGTLRMLMLTAGLLTTETPELMVLNEPETSLHGDLLPALGELI AEASRHIQILVVTHAPGLGAAISAHAEAGELLLEKPHGETLLHGQGLLSAPSWDWGKR" misc_feature 1045997..1046020 /locus_tag="CMS_1006" /old_locus_tag="CMS1006" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1047224..1048339) /locus_tag="CMS_1007" /old_locus_tag="CMS1007" /db_xref="GeneID:6156911" CDS complement(1047224..1048339) /locus_tag="CMS_1007" /old_locus_tag="CMS1007" /codon_start=1 /transl_table=11 /product="putative fatty acid desaturase" /protein_id="YP_001709751.1" /db_xref="GI:170781419" /db_xref="GeneID:6156911" /translation="MSRHMTDTDTSAPPRIVLTKPKRGGGSNPTTAYSGLLNTVREAG LLERRVGFYVLMFAGITAALVGLGIGFVLLGDSWFQLLIAAGLGIIFTQFAFLAHEAS HRQVFESGKANDIAGRTLANLFVGISYSWWMTKHSRHHANPNVMGKDPDIERDVISFT TEDAARAKGIYGWFTRHQGYAFFPILMFEGLNLHVHGFRTVFGRGKVDKRWLEISMLS TRIIAYLAVVFFFLPLGMAFAFVGVQLAVFGVYMGASFAPNHKGMPVLPKDSKVDFLR RQVLTSRNIKSTWLTDIYMGGLNYQIEHHLFPNMPRPALKKAQVIAKEYCATHNIPYT ETTLLASYGIVIAYLNRVGLSAGGDPFDCPASAAFGR" misc_feature complement(1047362..1048090) /locus_tag="CMS_1007" /old_locus_tag="CMS1007" /inference="protein motif:HMMPfam:PF00487" /note="HMMPfam hit to PF00487, Fatty acid desaturase,score 2.5e-45" misc_feature complement(order(1047611..1047679,1048049..1048108, 1048121..1048189)) /locus_tag="CMS_1007" /old_locus_tag="CMS1007" /note="3 probable transmembrane helices predicted for CMS1007 by TMHMM2.0 at aa 51-73, 78-97 and 221-243" gene complement(1048656..1049708) /locus_tag="CMS_1008" /old_locus_tag="CMS1008" /db_xref="GeneID:6156912" CDS complement(1048656..1049708) /locus_tag="CMS_1008" /old_locus_tag="CMS1008" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709752.1" /db_xref="GI:170781420" /db_xref="GeneID:6156912" /translation="MDGMKALQYTRIGSHPEVVEIDKPVPGPGQVLLRVTAAGVCHSD EYVMGLSEEEYRAGGYPLPLTLGHEGAGVVEELGAGVEHLAVGDAVAVYGPWGCGRCH ACAEGRENYCENAAAEGIQPPGLGAPGAMAEYMIVDDPRHLVPLGDLDPVANVSLTDA GLTPYHAIKTSLPKLGAGTYAVVIGTGGLGHVGIQILRALTGATVIALDVNDEKLELA RHVGAHHTVISDQDAADGIRAITGGRGVQTVFDFVGAKPTMATAVQVVEAGGDVTIVG IGGGSVEVGFGTIAFDAAVRIPYWGSRSELIEVLDLARSGQVTVETQRYALEDGPDAY AALAAGTVRGRAVIVP" misc_feature complement(1048659..1049678) /locus_tag="CMS_1008" /old_locus_tag="CMS1008" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 5.2e-84" misc_feature complement(1049466..1049510) /locus_tag="CMS_1008" /old_locus_tag="CMS1008" /note="PS00059 Zinc-containing alcohol dehydrogenases signature." gene complement(1049750..1050481) /locus_tag="CMS_1009" /old_locus_tag="CMS1009" /db_xref="GeneID:6156913" CDS complement(1049750..1050481) /locus_tag="CMS_1009" /old_locus_tag="CMS1009" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709753.1" /db_xref="GI:170781421" /db_xref="GeneID:6156913" /translation="MTADDTTADRSTAASDDPGHGRRELAAVGARALASWTAEVITRR RLLVAVGVALVTGTALALLLRPVFARADGEDRATSAAVLIGLVVGSAAGVVPVSVWLT RAISRHPSIVGTHPAWRDAALLDRSVDARGRVTLAAGTAERVATESRRAIASSAMPVP GAALLAVIALIGIPFFLFTGGGGTLAWFLPVYLLMSASTLATQCPAAGRMALLRDAAD AELALPEPERTQAPPVEPPHGTRLP" misc_feature complement(order(1049882..1049950,1049963..1050031, 1050179..1050247,1050275..1050343)) /locus_tag="CMS_1009" /old_locus_tag="CMS1009" /note="4 probable transmembrane helices predicted for CMS1009 by TMHMM2.0 at aa 47-69, 79-101, 151-173 and 178-200" gene 1050626..1051273 /locus_tag="CMS_1010" /old_locus_tag="CMS1010" /db_xref="GeneID:6156914" CDS 1050626..1051273 /locus_tag="CMS_1010" /old_locus_tag="CMS1010" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709754.1" /db_xref="GI:170781422" /db_xref="GeneID:6156914" /translation="MTAAQPSSASEPTSPPALDAVRDDLIRHLRLAREALVWKLEGLG DHDVRRPLVPTGSNLLGLVKHAAGVEAGYLGFVFGWPFPEQLPWMEEDAPPNADMRAT ADESCADIVGLSERVGAHSEATLRALPLDAVGRVPWWPGEAGLVTVQRIAVHLIAELN RHAGHADILRELVDGAAGLRAESGNLPAGDAAFWRAEHAETARVARQAAGLPPVD" misc_feature 1050686..1051159 /locus_tag="CMS_1010" /old_locus_tag="CMS1010" /inference="protein motif:HMMPfam:PF04978" /note="HMMPfam hit to PF04978, Protein of unknown function DUF664, score 1.7e-50" gene complement(1051310..1052273) /locus_tag="CMS_1011" /old_locus_tag="CMS1011" /pseudo /db_xref="GeneID:6156915" misc_feature complement(1051322..1051864) /locus_tag="CMS_1011" /old_locus_tag="CMS1011" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" /pseudo misc_feature complement(1052135..1052200) /locus_tag="CMS_1011" /old_locus_tag="CMS1011" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 39-60, sequence RPVSHVARELGVSRQCAHRWVA" /pseudo gene complement(1052371..1055403) /locus_tag="CMS_1012" /old_locus_tag="CMS1012" /db_xref="GeneID:6156916" CDS complement(1052371..1055403) /locus_tag="CMS_1012" /old_locus_tag="CMS1012" /codon_start=1 /transl_table=11 /product="putative alpha-mannosidase" /protein_id="YP_001709755.1" /db_xref="GI:170781423" /db_xref="GeneID:6156916" /translation="MTMPPTTALAEARIARFILDRLTPNVHRRRIPLTIEAWDAPGEP VPFAEAVQQEYRPFAVGTPWSRAWGTTWFHVTGTVPDDADAAGTALEVLVDLGFSDRQ PGFQAEGLVHRPDGSVVKAIEPYNGYVPLEGVGAGTGPGTPIDLWIEAASNPDVGGNS FYGETPLGDLATAGDDPLYTLRTMDLAWRDEAVWELDRDVWTLQGLMGQLDPASSRRA EILAALERACDAVDPDDVAGTAAAGRRALAAVLAAPAHASAHRVTAVGHAHIDSAWLW PVRETRRKVARTFSNVLALMDEDPDFVFAASSAQQYAWLKEDHPGLFERLRQRVAEGR FVPVGGMWVESDTNMPGGEALVRQLVQGKRFFLEEFGIDAREVWLPDSFGYTAALPQI VRGAGAEYFFTQKQSWNETNTMPHHTFLWEGIGGSRVFTHFPPVDSYNSDLSGEDLAR AERQHAEKAVSNASIVPFGWGDGGGGPTREMVAAAHRTRDLEGSPRVTLGTPLDFFDA AKAELRDPHVWSGEMYLEFHRGTYTSQARTKQGNRRSEHLLREAELWLATAAVRGLVE YPHDELDALWRTVLLLQFHDILPGTSIAWVHQEAEREHARVQGRLRELMADAQSVLAG SGERRIAFNAAPVDAAGVGALSAAVVDPAPGSPAPVADGDGWLIDNGLVRARFEADGT VSSLVDAASGRDLVAPGQRLGLLQLFRDTPNQWDAWDIDDAYRRNRTDLTDVESVRIE GAALVVERAFGASRVTQTWTLPAGEPELQVVTDVDWHERQKLLKLAFPVDVHADRAAS EVQFGHVQRVTHANTSWETARFETVAHRWVHVGEPGFGVAVANDATYGHDVTRIPRPD GGSATLVRQSLLRAPVFPDPHADQGRHVLRSAVRVAPDVLGAADAGYRLNLPMREVAG DHGVAPLVTSSNAAVVIEAVKLAEDRSGDLVVRLYEARGGRERTVVRVDAAAGLGDPI RTDLLERPLEGADARPSGEGIELTLRPFEIATLRFARA" misc_feature complement(1052386..1053525) /locus_tag="CMS_1012" /old_locus_tag="CMS1012" /inference="protein motif:HMMPfam:PF07748" /note="HMMPfam hit to PF07748, Glycosyl hydrolases family 38 C-terminal domain, score 1.7e-92" misc_feature complement(1053841..1054623) /locus_tag="CMS_1012" /old_locus_tag="CMS1012" /inference="protein motif:HMMPfam:PF01074" /note="HMMPfam hit to PF01074, Glycoside hydrolase, family 38, score 1.6e-135" gene complement(1055534..1056364) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /db_xref="GeneID:6156917" CDS complement(1055534..1056364) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709756.1" /db_xref="GI:170781424" /db_xref="GeneID:6156917" /translation="MTSPSGRVMRLVANLVLVVVALCFAVPLVWLVLASVDPSATLSA KVPAEFTLENFRAVLTPEISFIPLMNSLVLSGGCAVVTVVVAILAAYPLSRYRMRINK PFLYGILFGTCLPITAMMVPVYSLFVTLDLIDSIGGTVFFLAATSLPMAIWMAKNFMD SVPISLEEAAWTDGASMMRTLTHIVVPLMRPGIAVVFIFVFIQAWGNFFVPFILLLSP DKQPAAVSIFNFFGQYGSVAYGQLAAFSLVYSVPVIALYVLVSRTLGGSNALAGAVKG" sig_peptide complement(1055555..1055665) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /note="Signal peptide predicted for CMS1013 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.478 between residues 37 and 38" misc_feature complement(1055555..1056163) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.5e-09" misc_feature complement(order(1055585..1055653,1055720..1055788, 1055900..1055959,1055987..1056055,1056092..1056160, 1056263..1056331)) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /note="6 probable transmembrane helices predicted for CMS1013 by TMHMM2.0 at aa 5-27, 62-84, 97-119, 129-148,186-208 and 231-253" misc_feature complement(1055804..1055890) /locus_tag="CMS_1013" /old_locus_tag="CMS1013" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1056453..1057433) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /db_xref="GeneID:6156918" CDS complement(1056453..1057433) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709757.1" /db_xref="GI:170781425" /db_xref="GeneID:6156918" /translation="MRSADRRGAAGSGAGSGSGSGPVVGGPSPVRPGRARARALRTGA RTIPLLPSIVLLALFLLGPVISSLYSSFTDASLTGYAAGGAQFIGFDNYTALFADPDF PKSVLLTLAFVFFSAVVGQNVVGLGLALLMRQGNRVVRAIVGTFVIAAWVLPEIVAAF AAYAFFNDSGTLNTILGFFGIQGPNWLYGLPLLSVILANVWRGSAFSMLVYSAAVQEV PPEITESAEVDGATGWQRLVFITLPVISRSISTNLMLTTLQTLSVFTLIFVMTGGGPG TSSSTLPILAYQEAFQFSQLGFGTAIATIMLLVGAVFSVIYIRALRPEVD" sig_peptide complement(1056453..1056563) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /note="Signal peptide predicted for CMS1014 by SignalP 2.0 HMM (Signal peptide probability 0.972) with cleavage site probability 0.644 between residues 37 and 38" misc_feature complement(1056465..1057130) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.6e-10" misc_feature complement(order(1056480..1056548,1056576..1056644, 1056831..1056899,1056942..1057010,1057047..1057115, 1057227..1057295)) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /note="6 probable transmembrane helices predicted for CMS1014 by TMHMM2.0 at aa 47-69, 107-129, 142-164,179-201, 264-286 and 296-318" misc_feature complement(1056705..1056791) /locus_tag="CMS_1014" /old_locus_tag="CMS1014" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1057478..1058887) /locus_tag="CMS_1015" /old_locus_tag="CMS1015" /db_xref="GeneID:6156919" CDS complement(1057478..1058887) /locus_tag="CMS_1015" /old_locus_tag="CMS1015" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /protein_id="YP_001709758.1" /db_xref="GI:170781426" /db_xref="GeneID:6156919" /translation="MEQGSTMTNRTPRRRTRARILQITAASVAALLLATGCSGGAGGG GDSKTIKVAYQKFGTFTQMDAHMKETAKTFEAANPGMKVEFVPIAAQNDDYFTKLALM NRSASTAPDVMYEDTFKVKSDAAAGYLLPLDDQVAKWDDWSKFFDSAKQAGVGEDGKV YGIPMGTDTRALWYNKDLFQKAGLPVPWEPKTWDDVLDAAKTIKQELPDVVPINVYSG KPQGEGATMQGFEMLHYGTPTGTLYDDSTSKWITGSQGFEDSLGFIRDVYQGGIGPKP EEALDTNIGTIVAGQRIPQGKLAIDLDGSWLSGTWLDTGTNPWPEWSDVMGQAPMPTQ DGQAPGAVSMSGGWTLAVGAKTANPDKAFEFIADALDKDGSQSYDIAASQIAVRSDVA EDPEYVASNPTFEFFSSIVDKTHFRPATTDYSRISNAITVAMESVMTGQQSPSEAAAA YDQALVGIVGEDGTQKAEG" sig_peptide complement(1057478..1057612) /locus_tag="CMS_1015" /old_locus_tag="CMS1015" /note="Signal peptide predicted for CMS1015 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.418 between residues 45 and 46" misc_feature complement(1057760..1058818) /locus_tag="CMS_1015" /old_locus_tag="CMS1015" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 2.2e-22" misc_feature complement(1058762..1058830) /locus_tag="CMS_1015" /old_locus_tag="CMS1015" /note="1 probable transmembrane helix predicted for CMS1015 by TMHMM2.0 at aa 20-42" gene complement(1059109..1060443) /locus_tag="CMS_1016" /old_locus_tag="CMS1016" /db_xref="GeneID:6156920" CDS complement(1059109..1060443) /locus_tag="CMS_1016" /old_locus_tag="CMS1016" /codon_start=1 /transl_table=11 /product="ROK family transcriptional regulator" /protein_id="YP_001709759.1" /db_xref="GI:170781427" /db_xref="GeneID:6156920" /translation="MRASGILRRGPRPAGDGRPEEVPMRRGTNLPAIGGYNRTVVLDA VRRAAEGASRSEIAERTGLSAQTVTNVSRRLIDEGLVREGGTVIRGPGKPRTLLHLVA GGRFAVGVHMDPAVITSVLLDLEGTVLRHVSSPTPSASRPDEVVALVARLVDGLIAGA GVDRGAVLGVGLAAPGPIDVGAGLVLDPPMLPHWRHVPLRSALSTATGLPVLLEKDVT AAAVAELWFGPGDRRHLAFVYYGTGFGTGLVLGGEPVRGASSNAGDAGHIMVAARGRR CTCGRVGCVGELITPHALVRQAVEGGVLRAGDVSDAALEEAAASGDAVDMRLIGEAFH ALAARADTEDGSARRIVEAAARHLARAIVIQVNLLDLDEVVCGGPFWHPIARLVLETL PEEVRRSPALIAKHPVRVVESAVGEDVAAVGAACLVLDNAFSPRPSAMLIRG" misc_feature complement(1059562..1060119) /locus_tag="CMS_1016" /old_locus_tag="CMS1016" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 2e-30" misc_feature complement(1060225..1060290) /locus_tag="CMS_1016" /old_locus_tag="CMS1016" /note="Predicted helix-turn-helix motif with score 1554.000, SD 4.48 at aa 52-73, sequence ASRSEIAERTGLSAQTVTNVSR" gene 1060547..1061692 /locus_tag="CMS_1017" /old_locus_tag="CMS1017" /db_xref="GeneID:6156921" CDS 1060547..1061692 /locus_tag="CMS_1017" /old_locus_tag="CMS1017" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709760.1" /db_xref="GI:170781428" /db_xref="GeneID:6156921" /translation="MTDLLATAHEAVRTLPSPLPAARGPLSAALLADLVGGSSAPSVL GSDTAVGSAVEARSLASAPDLAALAADALAATGDVVRDDDVQLALFCLYELHHAGLAG VGDDREWDPRLIAVRGILEGAFEAVLRERIAVPARPEPTSAGVAAALFALTSADSGPS LSRFVARKASVEQLREFLVQRSIYTLGEADPHSWAIPRLRGRAKAALVEIQADEYGGG RPERVHATIFGATLRGVGLDDRYGSYLDDVPAITLASSNAMSLFGLHRRLRGAIVGHL AAFEITSSVPSRLYASGIRRLGFGDDVAWYYDEHVEADAVHEQIAAHDLAGGLVESEP GLLDDVLFGAAACLEVEGWVGAHVLSSWQAGRSSLREGSTAAVVAAA" gene 1061689..1061970 /gene="RS00183" /locus_tag="CMS_1018" /old_locus_tag="CMS1018" /db_xref="GeneID:6156922" CDS 1061689..1061970 /gene="RS00183" /locus_tag="CMS_1018" /old_locus_tag="CMS1018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709761.1" /db_xref="GI:170781429" /db_xref="GeneID:6156922" /translation="MSASPADDELTRGSGAARSPAPEPPRIIAYPDGPLLVRGEFEIV DPQGRPVPRTRRTVALCRCGVSSIKPYCDGTHRLVGFRTDPPAPDAAAE" gene 1062076..1063038 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /db_xref="GeneID:6158971" CDS 1062076..1063038 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709762.1" /db_xref="GI:170781430" /db_xref="GeneID:6158971" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1062148..1062213 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1062213..1062334 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1062334..1062399 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1062484..1063026 /locus_tag="CMS_1019" /old_locus_tag="CMS1019" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(1063049..1064362) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /db_xref="GeneID:6156923" CDS complement(1063049..1064362) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709763.1" /db_xref="GI:170781431" /db_xref="GeneID:6156923" /translation="MNGDLLLNIVLVVVFVLVGGVFAATEMALVTLREGQLNALAARG RRGEKVAALARNPNTFLAAVQIGVTVAGFASAAYGAASIAPSVVPVLESWGLESGLAS TVATLLLTLVIAYLSLVLGELAPKRLAIQRNAGFAYGVAPVLNGFAILMRPVIWLLSV STDVVVRLLGGDPHKTGEEMSEEELRDIVSSHEGLPDDERRILDDVLSLRHRQLSEVM KPRPEIAALDGTGTVREAGIDVQDRPYSRYPVVDKTIDDVIGFVHVRDLYQAIAADPE RPVSEILRPIPYLPATARVLPTLTMMRAEGHQIAVIVDEYGGTDGIVTLEDLVEEVVG EIFDEYDTDSAARDLAEDGGTIDGRLNFQDFEEATGVKLPDSASDTVAGFVIENLGRL AQVGDSVEVDGVTLQVTALDRRRISEILVVPREESATEDGDTATA" sig_peptide complement(1063049..1063117) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /note="Signal peptide predicted for CMS1020 by SignalP 2.0 HMM (Signal peptide probability 0.980) with cleavage site probability 0.882 between residues 23 and 24" misc_feature complement(1063088..1063324) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /inference="protein motif:HMMPfam:PF03471" /note="HMMPfam hit to PF03471, Transporter-associated region, score 2.8e-18" misc_feature complement(1063364..1063525) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 1.9e-06" misc_feature complement(1063547..1063711) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 9.7e-06" misc_feature complement(1063766..1064344) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /inference="protein motif:HMMPfam:PF01595" /note="HMMPfam hit to PF01595, Protein of unknown function DUF21, score 2.1e-57" misc_feature complement(order(1063895..1063963,1064000..1064068, 1064111..1064179,1064291..1064350)) /locus_tag="CMS_1020" /old_locus_tag="CMS1020" /note="4 probable transmembrane helices predicted for CMS1020 by TMHMM2.0 at aa 5-24, 62-84, 99-121 and 134-156" gene 1064500..1065015 /locus_tag="CMS_1021" /old_locus_tag="CMS1021" /db_xref="GeneID:6156924" CDS 1064500..1065015 /locus_tag="CMS_1021" /old_locus_tag="CMS1021" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709764.1" /db_xref="GI:170781432" /db_xref="GeneID:6156924" /translation="MHGSRVVEQVGKQPGRPAAAAVPYGRGMDQTVLDGSWLGSSGWV TLALVNAGLAEQKGRSRWNWFLVSIVLGPIATFFIVTWERVPERPDATPAEGPANGLL AVGIGLAAAAVVIAVVAVIGGDTGPWIAAAALALVAAVFLVLHVLARRRWAALQAGRG AASPGPLDPRP" misc_feature order(1064602..1064661,1064689..1064757,1064794..1064862, 1064875..1064943) /locus_tag="CMS_1021" /old_locus_tag="CMS1021" /note="4 probable transmembrane helices predicted for CMS1021 by TMHMM2.0 at aa 35-54, 64-86, 99-121 and 126-148" gene complement(1065046..1066239) /locus_tag="CMS_1022" /old_locus_tag="CMS1022" /db_xref="GeneID:6156925" CDS complement(1065046..1066239) /locus_tag="CMS_1022" /old_locus_tag="CMS1022" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709765.1" /db_xref="GI:170781433" /db_xref="GeneID:6156925" /translation="MTGASIAGPALAWGLHREGFDVTLLERSAEQRQAGQNIDVRGLG REVLRRMGIEDVVMANLTGEDGTRFVDEEGRVLATFPRAEGEDGPTAEVEILRGRFAG ILVDLVRDDVEIRHGDFVTGVQQDATGVDVELASGSRERYDLLLVAEGRSSRTRRLAF AEETTLRDHSVSIAYGTIDRIPGDTGYWDFLTGCGARNATIRPDDEGTIRASLSFESE PSGFEQLPIDAQMTILRARFRGAGWQVERILDGFQARPDEFYTQRMEQVIVSTWSKGR IALLGDAAWGSGFTGMGTTLSLVSAHVLAGELGRALADTGDTFAAAFARYEGQLRRYA DSAQGLPPGGARLTHPSSAVGQRVMRGAVRVAASRPVRGFADRFLLTSARHAPTLAAY PRLRG" misc_feature complement(1065214..1065819) /locus_tag="CMS_1022" /old_locus_tag="CMS1022" /inference="protein motif:HMMPfam:PF01360" /note="HMMPfam hit to PF01360, Flavoprotein monooxygenase,score 5.1e-07" gene 1066385..1066879 /gene="ery-ORF25" /locus_tag="CMS_1023" /old_locus_tag="CMS1023" /db_xref="GeneID:6156926" CDS 1066385..1066879 /gene="ery-ORF25" /locus_tag="CMS_1023" /old_locus_tag="CMS1023" /note="Weak match to PF01047 MarR family" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001709766.1" /db_xref="GI:170781434" /db_xref="GeneID:6156926" /translation="MTHTIAVPGDRSEVLERLRDYTTAFDESVRQLAAALGLPTTDTT ALAEIIWAETADRALSPARLSERLHLTSGATTALINRLEGGRHIGRSRESADRRVVTL RPTAETRARAMALLQGAQADIDRALDGFTAEQLRTAAAVVRAVTDGTAAGTRGMAGDG STPT" gene complement(1066895..1067692) /locus_tag="CMS_1024" /old_locus_tag="CMS1024" /db_xref="GeneID:6158677" CDS complement(1066895..1067692) /locus_tag="CMS_1024" /old_locus_tag="CMS1024" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709767.1" /db_xref="GI:170781435" /db_xref="GeneID:6158677" /translation="MTGASAAPVGVEPAPRIRAVTVVIPARDEEELLGRCLASVEVAA SRARMASVRVRVILVADDCRDRTAEVARAAGVEVIESAAGRVGAARAQGVDAARAGWE GDDAEHWIACTDADSAVPPAWITSQLELADAGADVVVGTVRPELDDLSPDQIAAWRST RVPGHANGHVHGANLGVRADAYAAAGGFPAVAEHEDVDLVARLRGLDARITASAAGEV LTSSRREGRTPGGYAGYLHVSLLERARERELERQRAAGCASPCVPTG" misc_feature complement(1067135..1067632) /locus_tag="CMS_1024" /old_locus_tag="CMS1024" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 2.3e-15" gene complement(1067689..1070367) /locus_tag="CMS_1025" /old_locus_tag="CMS1025" /db_xref="GeneID:6156927" CDS complement(1067689..1070367) /locus_tag="CMS_1025" /old_locus_tag="CMS1025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709768.1" /db_xref="GI:170781436" /db_xref="GeneID:6156927" /translation="MTSAPPPVPPLDADALARVRLASGAVPPGDDEPGPAVALVREAL ATTPPGLGWSTERALALAVAMGDGGARPGTGGTADLWEALATLAAADLGIARTIEPHL DALAILDQERDSAGGGAGGRADGDADGDHGPGRAGDAEARTWGVFAAEGGGDPLTATA DAPGSDAVRLSGTKPWCSLAGSLTHALITAALDDGSRGLFAVDLRHPGVEVVPGAWVA RGLVEVPSGPLRMRDVPARRVGAPGWYLERPGFHWGGIQVAACWYGGAVGLARTLLRA ASREGADRLLLMHLGAVDAALDGARASLAEAASLVDRGRAEGEEGRLLAKRVRAVVAR AVDDTLTHVAHALGPAPLAQDADHAKRVADLGLYVRQHHAERDDASLGGALAEAVRRG AAAADAMDADAMDAATTDAAAATPDPALQAARIPTAGVAFDARKAGTDADAWDADPRW DALAAPDLDRMSALLVVSAHADDESIGVAGLMATAAARGVPVTLVIVTDGAASHPGSP TRTPDELVALRRVEARTALDAVAPDARLVLLGHPDGGIRERRDAVREDIAALLADAAP GTWVAAPWRGDGHRDHRVTGEVVAELVGALPAERGIRLVEYPVWMWHWATPDDPRVPW ATMRALQLDARVREVKRAAIRAHASQVDPLSDAPEDAAVLQPGFLRHADRDREVLIVG DDRAADATGSASASAAERFDAAYARAEDPWRVTTRWYERRKRLATLAALPDERYGRAL EIGCSIGVTTAGLAERVDELLAVDVAPTAIERARVRLADAPHVRLEVRDVGADWPAGG FDLVVMSEVGYYLDDAAFDRVLAALPDALGTAGTLVACHWRHPEGDFRRTGDEVHARL AAVPGLHVLMRHEEDDFLLEVLSADPRSVATRTGLR" misc_feature complement(1068589..1068975) /locus_tag="CMS_1025" /old_locus_tag="CMS1025" /inference="protein motif:HMMPfam:PF02585" /note="HMMPfam hit to PF02585, LmbE-like protein, score 1.7e-30" gene 1070620..1070877 /locus_tag="CMS_1026" /old_locus_tag="CMS1026" /db_xref="GeneID:6156928" CDS 1070620..1070877 /locus_tag="CMS_1026" /old_locus_tag="CMS1026" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709769.1" /db_xref="GI:170781437" /db_xref="GeneID:6156928" /translation="MIRTAHARQRGPTMDQHTDQHADEPTTDGPAGQPTPDAVEEFER LAVLRMGGQDIEGALEELPDADARDVAEVAIDRVVRGYENL" gene complement(1070894..1071814) /gene="purC" /locus_tag="CMS_1027" /old_locus_tag="CMS1027" /db_xref="GeneID:6156929" CDS complement(1070894..1071814) /gene="purC" /locus_tag="CMS_1027" /old_locus_tag="CMS1027" /EC_number="6.3.2.6" /note="catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthase" /protein_id="YP_001709770.1" /db_xref="GI:170781438" /db_xref="GeneID:6156929" /translation="MSAQAPAGHASEWDLPGWDHAYSGKVRELFSPAVDDTDDRALEG EPHVLVVATDRVSAYDFALEPGIPGKGELLTQLSLWWFDRLEVPNHLVDAATLDRIGI PESVQGRAMLCRVLEMLPIECVVRGYLAGSGWEEYREHGTVCGIPLPAGLQQGDRLPE PIYTPAWKAPQGEHDENITFARTEELVGHEEAARLRDLSLDVYRRAAAIAEERGVILA DTKFEFGIDPRTGITTLADEVLTSDSSRYWDAEAHATGNRTDSFDKQIVRDWLAANWD RTGTPPVLPQEIVERTAGRYRELIARLTGR" misc_feature complement(1070951..1071766) /gene="purC" /locus_tag="CMS_1027" /old_locus_tag="CMS1027" /inference="protein motif:HMMPfam:PF01259" /note="HMMPfam hit to PF01259, SAICAR synthetase, score 2.3e-95" misc_feature complement(1071140..1071166) /gene="purC" /locus_tag="CMS_1027" /old_locus_tag="CMS1027" /note="PS01058 SAICAR synthetase signature 2." misc_feature complement(1071419..1071463) /gene="purC" /locus_tag="CMS_1027" /old_locus_tag="CMS1027" /note="PS01057 SAICAR synthetase signature 1." gene complement(1071811..1073061) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /db_xref="GeneID:6158897" CDS complement(1071811..1073061) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /EC_number="6.3.4.13" /note="catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylamine--glycine ligase" /protein_id="YP_001709771.1" /db_xref="GI:170781439" /db_xref="GeneID:6158897" /translation="MKILVLGSGAREHAIVTALLREDAGHEIVAAPGNAGIARVVPVV KMDIDDPAVVAEHALTEGFELVVVGPEAPLVAGVADALRTRGIPVFGPGRAAAALEGS KTFAKRIMEEAGVPTGRAAQAGTVDEVEAALDEYGAPYVIKADGLAAGKGVLVTADRT LALEHARHYLGQGTVLVEEFLAGQEVSLFLLSDGHDVVPLSPAQDYKRLGDGDAGPNT GGMGAYSPLPWLPEDFVDEVIDTIALPTVRKLADEQTPFIGLLYCGLILTADGIRVIE FNARFGDPETQVVLPRLVTPLSQLLLAAASGELGGVARPEFSDDVAVTVVVASEGYPE SPRTGRVIEGVEEAEGVAGVSIAHAATSESDAGLVATGGRVLSVVATGASFDQARSRV YEAVGRLSLDGSQHRTDIAAQVIR" misc_feature complement(1071817..1072101) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /inference="protein motif:HMMPfam:PF02843" /note="HMMPfam hit to PF02843, Phosphoribosylglycinamide synthetase, score 1.4e-31" misc_feature complement(1072117..1072530) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /inference="protein motif:HMMPfam:PF01071" /note="HMMPfam hit to PF01071, Phosphoribosylglycinamide synthetase, score 6.5e-71" misc_feature complement(1072201..1072224) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /note="PS00184 Phosphoribosylglycinamide synthetase signature." misc_feature complement(1072531..1072758) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /inference="protein motif:HMMPfam:PF02842" /note="HMMPfam hit to PF02842, Phosphoribosylglycinamide synthetase, score 6.6e-18" misc_feature complement(1072762..1073061) /gene="purD" /locus_tag="CMS_1028" /old_locus_tag="CMS1028" /inference="protein motif:HMMPfam:PF02844" /note="HMMPfam hit to PF02844, Phosphoribosylglycinamide synthetase, score 3.4e-36" gene 1073441..1073821 /locus_tag="CMS_1029" /old_locus_tag="CMS1029" /db_xref="GeneID:6158898" CDS 1073441..1073821 /locus_tag="CMS_1029" /old_locus_tag="CMS1029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709772.1" /db_xref="GI:170781440" /db_xref="GeneID:6158898" /translation="MAKARIHPTVGQPAVRAALAQGADADRETRATAVRFLLQSLADL APGGTVEVRVPPFGAVQCIEGPGHTRGTPPNVIETDPATWIALATGGTTWDAGVEAGA VRASGLRADLRGLLPVPWELPADR" gene 1073880..1074188 /locus_tag="CMS_1030" /old_locus_tag="CMS1030" /db_xref="GeneID:6156930" CDS 1073880..1074188 /locus_tag="CMS_1030" /old_locus_tag="CMS1030" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709773.1" /db_xref="GI:170781441" /db_xref="GeneID:6156930" /translation="MTDARPQPDDERRTEVLVRRSPRYFRFMGVGAVLGIFVAMVLTL AFPPNPEFSEAQVLAFLALFAVVLFGGLAALIALALDRAASRRSRVLTAERERGEPGA" sig_peptide 1073880..1074038 /locus_tag="CMS_1030" /old_locus_tag="CMS1030" /note="Signal peptide predicted for CMS1030 by SignalP 2.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.602 between residues 53 and 54" misc_feature order(1073952..1074020,1074048..1074116) /locus_tag="CMS_1030" /old_locus_tag="CMS1030" /note="2 probable transmembrane helices predicted for CMS1030 by TMHMM2.0 at aa 25-47 and 57-79" gene complement(1074240..1075754) /gene="purF" /locus_tag="CMS_1031" /old_locus_tag="CMS1031" /db_xref="GeneID:6156931" CDS complement(1074240..1075754) /gene="purF" /locus_tag="CMS_1031" /old_locus_tag="CMS1031" /EC_number="2.4.2.14" /note="Catalyzes first step of the de novo purine nucleotide biosynthetic pathway" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="YP_001709774.1" /db_xref="GI:170781442" /db_xref="GeneID:6156931" /translation="MGDWPLPHLFYSSGVSRSMCGIVGVVSSEPVNQLVYDSLLLLQH RGQDSTGIATAEGNTFHVKKLSGQVREAFRTRDMRSLLGTMGLGHVRYATKGSATDED EAQPFYVNAPYGIVLVHNGNLTNTRELAQELFHVDRRHTNTSSDTELLVNVLAHELQS QVSGLALDPEQVFTAVERVHERVEGSYASIAMIAGHGMLAFRDPFGIRPLTLGRRELA GGRMEWVVASESLVMESLGYEIVRDVRPGEAVFITMDGDMHARQCHPAPRLIPCAFEF VYLARPDSVMSGIGVYDARLRMGNRLAATIAEHSPAGDIDVVMPIPDSSRPSAMQVAQ TLGIEYREGFYKNRYVGRTFIMPGQAQRKKSVRQKLNAMSSEFQGKNILIVDDSIVRG TTSREIVTMARQAGANKVTFTSAAPPVRYPHVYGINMPSRQELIAHGRKIPEIAQELG ADHLIYQEVADMRDAILEGSTGVEDLEMSCFTGEYITGNVTPEYLSWLERTQLS" misc_feature complement(1074465..1074878) /gene="purF" /locus_tag="CMS_1031" /old_locus_tag="CMS1031" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 1.5e-08" misc_feature complement(1074573..1074611) /gene="purF" /locus_tag="CMS_1031" /old_locus_tag="CMS1031" /note="PS00103 Purine/pyrimidine phosphoribosyl transferases signature." misc_feature complement(1075287..1075697) /gene="purF" /locus_tag="CMS_1031" /old_locus_tag="CMS1031" /inference="protein motif:HMMPfam:PF00310" /note="HMMPfam hit to PF00310, Glutamine amidotransferase,class-II, score 2e-48" gene 1075790..1076899 /gene="purM" /locus_tag="CMS_1032" /old_locus_tag="CMS1032" /db_xref="GeneID:6158899" CDS 1075790..1076899 /gene="purM" /locus_tag="CMS_1032" /old_locus_tag="CMS1032" /EC_number="6.3.3.1" /note="catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole synthetase" /protein_id="YP_001709775.1" /db_xref="GI:170781443" /db_xref="GeneID:6158899" /translation="MTTKSSYAEAGVDTEAGDLAVQLMKEAVSRTHGPEVIGGFGGFA GLFDASALTRFRHPLLATSTDGVGTKVAIAQAIDKHDTIGQDLVGMVVDDIVVVGARP LFMTDYIACGKVVPARIADIVAGIARACSDTGTALVGGETAEHPGLLGPDDYDVAGAA VGAVEADSVLGSERVRDGDVVLALASSGLHSNGFSLVRHILSVAGIGFGDTSAELGGV VGEVLLEPTRLYTTPLLDVLAQPELGPAVHSISHVTGGGIAANLARVLPRGSFSELER STWSPPAVFRALAGIAGSTLESAEGTWNLGIGMIAVVDAAAAERIARALTAAGIPTWE AGRVTIGDAPAGAGFEQGAKGVDGGAVRLTGRYRD" misc_feature 1075796..1076284 /gene="purM" /locus_tag="CMS_1032" /old_locus_tag="CMS1032" /inference="protein motif:HMMPfam:PF00586" /note="HMMPfam hit to PF00586, AIR synthase related protein, score 3.2e-59" misc_feature 1076315..1076836 /gene="purM" /locus_tag="CMS_1032" /old_locus_tag="CMS1032" /inference="protein motif:HMMPfam:PF02769" /note="HMMPfam hit to PF02769, AIR synthase related protein, C-terminal, score 5.8e-23" gene complement(1077041..1077265) /locus_tag="CMS_1033" /old_locus_tag="CMS1033" /db_xref="GeneID:6158902" CDS complement(1077041..1077265) /locus_tag="CMS_1033" /old_locus_tag="CMS1033" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709776.1" /db_xref="GI:170781444" /db_xref="GeneID:6158902" /translation="MRGSRMGRGRQKAKHTKIARELKSFSPNVDYTQLERELTTHGAV DEQYAAEAAKWDEYADEPDAYVPGDEQKRA" gene 1077460..1078590 /locus_tag="CMS_1034" /old_locus_tag="CMS1034" /db_xref="GeneID:6156932" CDS 1077460..1078590 /locus_tag="CMS_1034" /old_locus_tag="CMS1034" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709777.1" /db_xref="GI:170781445" /db_xref="GeneID:6156932" /translation="MTSEPAETQVVVIGAGQAGLSVAYHLRRLGLRMGTDAVVLDRGP TTGGAWQHRWAALRLGSAHRVADLPGMSELGISFATADRRLPARDVVRDHYARYERHF DLRVARPVEVRAVLDADVPPPAVSRRRAAHPTDSARPLLVRATDGDRIARLVVNATGT WGAPFIPSYPGLATFRGRQLHTSGYRAAADLRGLRVLVVGGGTSAIGFLLELEGVAAR TTWSTRRPVDFLEAGELDVEAAVRAVDLQDQAARAGEALPSIVSGTGVPRTRRIVAGI RRGVLDSRGPIARFEEDAVVWADGGRDQVDAVIWATGFRPEIRHLAPLGLREKEGGVR VESGVSARDPRVFLAGYGPQASTIGANRAGRRVARQVVAALG" gene complement(1078923..1079486) /locus_tag="CMS_1035" /old_locus_tag="CMS1035" /db_xref="GeneID:6156933" CDS complement(1078923..1079486) /locus_tag="CMS_1035" /old_locus_tag="CMS1035" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709778.1" /db_xref="GI:170781446" /db_xref="GeneID:6156933" /translation="MSDNPEQIRAEIERTRNELSIDVDAVADKVTPAKVAQRQTDKVR GALSNVKDSVLGSAGDARSSVGDAVSGTAGGAKAKAQGNPLGLGLVAFGAGLLIASLI PASDKEKELASTVKDKAQPLVEKATDAAKDVASELKEPAQQAAAAVKDTATDSAGTVR SEAQSTAQDVQASAQDAKQAVQDDARS" misc_feature complement(1078950..1079171) /locus_tag="CMS_1035" /old_locus_tag="CMS1035" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 0.042" gene complement(1079483..1079902) /locus_tag="CMS_1036" /old_locus_tag="CMS1036" /db_xref="GeneID:6156934" CDS complement(1079483..1079902) /locus_tag="CMS_1036" /old_locus_tag="CMS1036" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709779.1" /db_xref="GI:170781447" /db_xref="GeneID:6156934" /translation="MTDGRTPSEEKAATTSLGDLLGNVTKDVSTLMRQEIALAKAEIS DSAKKAGKGAGLLGGAGYAGIMAVFFLSVALMYALGYWFDNLAWAAVVVAVIWAVIGL VMYLQGRKQLKTVQGAPRTAESVKKIPEAMKRNEADR" misc_feature complement(1079486..1079869) /locus_tag="CMS_1036" /old_locus_tag="CMS1036" /inference="protein motif:HMMPfam:PF07332" /note="HMMPfam hit to PF07332, Protein of unknown function DUF1469, score 2.9e-34" misc_feature complement(order(1079585..1079644,1079672..1079740)) /locus_tag="CMS_1036" /old_locus_tag="CMS1036" /note="2 probable transmembrane helices predicted for CMS1036 by TMHMM2.0 at aa 55-77 and 87-106" gene complement(1079899..1080795) /locus_tag="CMS_1037" /old_locus_tag="CMS1037" /db_xref="GeneID:6156935" CDS complement(1079899..1080795) /locus_tag="CMS_1037" /old_locus_tag="CMS1037" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709780.1" /db_xref="GI:170781448" /db_xref="GeneID:6156935" /translation="MSNDLTPASPAGGGSATHDAYVAVPVPAYPGTSGGSTTGGDASA SSSDGSSSAKDTAKEQAASVAGDAKAGTQHVADVTKDEAGKVASEVKSQAQDLIAQTR DQLREQTGVQQERAAGSLRTLSDELRDMGDKSESTGLASELVSQAAQRSGSAASYLEG RDPGTLLKDVTDFARRRPGLFVGLAVVAGVAAGRLTRSLTSDAHDQKAAEQATPSTGA STTGSGTTGTATTGTGYVTPAVPTASAHAPTELSADEPIGVGPYDAPATSASTPLYDQ TRTTDPLTETFGAGGTSDGSRA" misc_feature complement(1080487..1080690) /locus_tag="CMS_1037" /old_locus_tag="CMS1037" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 0.25" gene complement(1080943..1083003) /locus_tag="CMS_1038" /old_locus_tag="CMS1038" /db_xref="GeneID:6156936" CDS complement(1080943..1083003) /locus_tag="CMS_1038" /old_locus_tag="CMS1038" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709781.1" /db_xref="GI:170781449" /db_xref="GeneID:6156936" /translation="MTPDPQAPESSPAKRLLIGEKLASDKLEGQLLPKHLALPIFASD PLSSVAYAPQELLLILTLGGLAFLSFAPWVAACVVILLVVVVLSYRQLIKAYPSGGGD YEVAHKNLGEKAGLVVASALLVDYILTVAVSVASGVDNIISAIPEIAPFRVEIAVFFV ALLAAVNLRGVRESSKAFAVPTYLFIASVGLMIVVGLTRTALGDPPVAESAAYTVDTP TLSQVAFILLLLRAFSSGCSALTGVEAISNGVPAFRTPKVKNAQATLVIMGGTAIVLF VGLTTLALIAQVHYGEKPCDLIGWAGCATEPQKSLMAQVAGATFGNGSVMFYLLQATT AAVLLLAANTAFNGFPLLGSVLAKDAYAPKSLLTRGDRLVYSNGMLLLALGATLILVV YQANLTQLIQLYIIGVFVSFTLGQTGMVVHWTRMLREGCANRGEVIRGLAINAFGALL TALVLIVVTITKFTHGAWLVFAIMPVLFLLMLGVNRYYRDVEKEIEVDPVTVFGSTGD HAVVLVGRMQKPVLKALDYAIAANHDSIEAVHVSVDDEATKLLERQWVEMEIEMPLRI VASPYRDISFPLIKYLKSRRVEHGSEIITVYTPVYIVGHWWETLLHNHKARRIRQKLL LVHGVTLALVPWLLDSSELIYGRRSRPVPGQDRRGEPVRPAVRRSGPPPTTPVKHTSG RRTP" misc_feature complement(order(1081069..1081137,1081540..1081608, 1081621..1081680,1081738..1081806,1081819..1081887, 1081948..1082016,1082146..1082214,1082275..1082343, 1082407..1082475,1082494..1082562,1082590..1082658, 1082743..1082811)) /locus_tag="CMS_1038" /old_locus_tag="CMS1038" /note="12 probable transmembrane helices predicted for CMS1038 by TMHMM2.0 at aa 65-87, 116-138, 148-170,177-199, 221-243, 264-286, 330-352, 373-395, 400-422,442-461, 466-488 and 623-645" gene complement(1083092..1083757) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /db_xref="GeneID:6156937" CDS complement(1083092..1083757) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709782.1" /db_xref="GI:170781450" /db_xref="GeneID:6156937" /translation="MLRRSVQFALGIFLYGFAIGMMLQATIGVSPWDVLSQGLGLRTG IPFGVATNIIGALVLLLWIPIRQRPGWGTVLNVVFVGYSAQVALAVVPAVDSLWIRIP LFAAGLVLLGVATGLYIGAHFGPGPRDGLMTGIHRRTGWPVWRVRVGIELLVLAIGWA IGGDVGIGTLAFALLIGPVVQRTLPLFDLPVPVRAPRRRTRLATPEDPAGSLPTGPVA TVG" sig_peptide complement(1083092..1083178) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /note="Signal peptide predicted for CMS1039 by SignalP 2.0 HMM (Signal peptide probability 0.910) with cleavage site probability 0.437 between residues 29 and 30" misc_feature complement(1083218..1083460) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /inference="protein motif:HMMPfam:PF02588" /note="HMMPfam hit to PF02588, Protein of unknown function DUF161, score 8.4e-16" misc_feature complement(order(1083227..1083295,1083398..1083466, 1083476..1083544,1083563..1083631,1083674..1083733)) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /note="5 probable transmembrane helices predicted for CMS1039 by TMHMM2.0 at aa 9-28, 43-65, 72-94, 98-120 and 155-177" misc_feature complement(1083506..1083748) /locus_tag="CMS_1039" /old_locus_tag="CMS1039" /inference="protein motif:HMMPfam:PF02588" /note="HMMPfam hit to PF02588, Protein of unknown function DUF161, score 4.6e-08" gene 1083851..1085263 /locus_tag="CMS_1040" /old_locus_tag="CMS1040" /db_xref="GeneID:6156938" CDS 1083851..1085263 /locus_tag="CMS_1040" /old_locus_tag="CMS1040" /codon_start=1 /transl_table=11 /product="GntR family regulatory protein" /protein_id="YP_001709783.1" /db_xref="GI:170781451" /db_xref="GeneID:6156938" /translation="MLGPTALTALLGEWARPGAPVYQALADGIRHLVLDGRVPVGARL PAERELATALGLSRTTVAAAYAALRGTGHLASRRGSGSVTRIPRSAPHAEGGGREVAD MSRAAVPAAPALADAATRAVARLPAHLEGHGYDVDGLPELREAIAARYRARGLPTEAD DVMVTVGAQHAIGLLASVLVHRGDRALVEQPSYPHAIQALRDSGARLVGAGVGADGWD EDVLEQTIRRTRPALAYLMPDFHNPTGRTMPEDQRARIVVLAEAHGVTLIADETTAEL DIDRATAHPPLAVHGSPGAVVLVGSVGKTVWGGLRVGWIRAGRPLLRELARARSARDL GTPVLEQLVVAEVLGGMDGILAVRRTRLRETRDHVEAELARRFPGWEVPHVDGGLAVW VGIGAPVSTELALAARSRGLAITGGSRFGHDGAFERFLRIPITAPPAATDRALDILED AWRGLSPAPGLDLVDRSVLV" misc_feature 1083911..1084102 /locus_tag="CMS_1040" /old_locus_tag="CMS1040" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 1.4e-11" misc_feature 1083980..1084054 /locus_tag="CMS_1040" /old_locus_tag="CMS1040" /note="PS00043 Bacterial regulatory proteins, gntR family signature." misc_feature 1084292..1085206 /locus_tag="CMS_1040" /old_locus_tag="CMS1040" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 5.6e-06" gene 1085312..1086457 /locus_tag="CMS_1041" /old_locus_tag="CMS1041" /db_xref="GeneID:6156939" CDS 1085312..1086457 /locus_tag="CMS_1041" /old_locus_tag="CMS1041" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709784.1" /db_xref="GI:170781452" /db_xref="GeneID:6156939" /translation="MRLPSAASVPNLEGVSMRMRPSRGATTSETRDPQEHPAALPVPV RGRRRPLAGLGALAVVASLAVAVPSPASAASVADPAAAAGTASVSASTTEEATAYWTA DRRADALATEGAAHGAAATDGAAATAATEATAATDATADTTATGSTPGRIVTHPGLEY VGILFYVADGRNRTCTASVVDTPQGDAIATAAHCLVDPATGAPVRLATFVPGTKAAQA PFGLWPVDTSSVTDSWKRTHAVVDDAGFARVRSLDGRTLADVVGAARPVFDRPLVPAQ GAAGTLSVLGYPQAAPYSGTQLVACASVPRRSAHHTVSLPCALGDGAGGAPIYTRGAR VPVRGELRPEQRSVVAAPASPAAGRADVVLAEWGAEAQQALAALTAR" gene 1086567..1088648 /locus_tag="CMS_1042" /old_locus_tag="CMS1042" /db_xref="GeneID:6156940" CDS 1086567..1088648 /locus_tag="CMS_1042" /old_locus_tag="CMS1042" /note="Similarity to CMS1046 suggest local inverted duplication" /codon_start=1 /transl_table=11 /product="putative glycogen debranching enzyme" /protein_id="YP_001709785.1" /db_xref="GI:170781453" /db_xref="GeneID:6156940" /translation="MTIDLPPISRSYISRPYPLGATVVARDGGLPSGLNVAVYSETAE AIEVCVFDDDGTESRTRLSERTGHVFHGLVEGAGIGTRYGLRVHGEWDPARGLRHNPA KLLLDPYAIAIEGHPTWGEDVFAHTFDDPDAINEADSAASMPRSVVADRRFDWEDDEA PRTPLDETVVYEVHVKGFTQQMESVPEEIRGTYAGMAHPSAIEYLTDLGVTSVELLPV HHFMQDSHLEEKGLRNYWGYNSIGFLAPYSDYSSAGDDGSQVAEFKEMVKALHAAGLE VILDVVYNHTAEGNHMGPSLSLKGIDNASYYRLVEGDEASYFDTTGTGNSLNVGHPAA LALIMDSLRYWVEEMHVDGFRFDLATTLTRQDGDAEIHSAFLTLIHQDPVLAPVKMIA EPWDTAGYQVGGFPADWSEWNGKFRDDVRDFWHSGQNVLGALAQRITGSPDVYESGRR SPLCSVNFITAHDGFTLADLTSYDEKHNEANGEDNNDGESDNRSSNAGVEGPTDDPEI IAIRDRQRRNMLGTLLLSSGVPMVLGGDEIARTQGGNNNAYCQDDEISWFDWANVDRN LQDFTRKLIRLRRGNRALRPIWFRGDDVEGAEEAVRFIRADGATLEPQDWEDPNAFSI GVIMKGRDSDAFFVAFNAAEGPVEFQLPEGIGVSWHLAISSDSEQNVTEDATSILVRD RSFTVLRAARS" misc_feature 1086618..1086896 /locus_tag="CMS_1042" /old_locus_tag="CMS1042" /inference="protein motif:HMMPfam:PF02922" /note="HMMPfam hit to PF02922, Glycoside hydrolase, family 13, N-terminal, score 4.6e-20" misc_feature 1087080..1088300 /locus_tag="CMS_1042" /old_locus_tag="CMS1042" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 5.1e-12" gene 1088746..1089708 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /db_xref="GeneID:6156941" CDS 1088746..1089708 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709786.1" /db_xref="GI:170781454" /db_xref="GeneID:6156941" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1088818..1088883 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1088883..1089004 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1089004..1089069 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1089154..1089696 /locus_tag="CMS_1043" /old_locus_tag="CMS1043" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene 1089780..1092335 /gene="glgP" /locus_tag="CMS_1044" /old_locus_tag="CMS1044" /db_xref="GeneID:6156942" CDS 1089780..1092335 /gene="glgP" /locus_tag="CMS_1044" /old_locus_tag="CMS1044" /EC_number="2.4.1.1" /codon_start=1 /transl_table=11 /product="putative glycogen phosphorylase" /protein_id="YP_001709787.1" /db_xref="GI:170781455" /db_xref="GeneID:6156942" /translation="MKAIRRFTVRAVLPEELSALDELAGNLRWSWYEPTRRVFAHVSP ELWERTGHDPVALLGAVDQERLRELAADEGFVAWAEEQRADLRAYVRESRWYQSLEGD VPEAIGYFSPEYGIAAALPQYSGGLGILAGDHLKSASDLGVPLVGVGLFYRSGYFRQG ISSDGWQQETYPVFDPDGLPLQVLRDGDGRPVQVELGLPAGRTLHARIWQARVGRIPL LLLDTDVPENDDDLRRVTDRLYGGGGEHRLHQELLLGIGGVRAIAAHARVTGSPVPRV FHTNEGHAGFLGVERISTLMADGLDFDEALQVVRAGTVFTTHTPVPAGIDRFDVGLVR EHVTERLLPGVPPERVLGLGAELHDGGSPDVFNMALMGLRLAQRANGVSQLHGEVSRG MFAGLWPGFDTDEVPIASVTNGVHAPTWTDPMLMSLARERLGTWDTTAADWSSTAVSD GDLWDVRGRMRRQLVEDARRRVVRAWREQNPGAVEPAWLEDVLDPEVLTIGFARRVPT YKRLTLMLHDRERLRRILTDADRPVQIVVAGKSHPADDEGKRLIQELVRFAAEPGIRG RLVFLPDYDIGMAQLLYPGTDVWLNNPLRPLEACGTSGMKAALNGALNLSILDGWWNE YYDGGNGWAIPSADGAHDGAERDAMEATALYDLIENRIAPRFYERDADGVPVGWVHDI RHTLRTLSPELSADRMVRQYVERLYVPAGRAQAAVAADGWARARELVAWRGRVAAAWP SVQVAHVESEGVGQQAQVGDELRVRAWVALGGLDAGDVTVEVVHGRTGDGDVLTDVVR HPLSPVGGSGGQQEYAGAVALTTAGPFGYTVRVVPRHELLASSAEPGLVAVAS" misc_feature 1090134..1091894 /gene="glgP" /locus_tag="CMS_1044" /old_locus_tag="CMS1044" /inference="protein motif:HMMPfam:PF00343" /note="HMMPfam hit to PF00343, Glycosyl transferase,family 35, score 4.2e-09" misc_feature 1091571..1091609 /gene="glgP" /locus_tag="CMS_1044" /old_locus_tag="CMS1044" /note="PS00102 Phosphorylase pyridoxal-phosphate attachment site." gene complement(1092398..1093459) /locus_tag="CMS_1045" /old_locus_tag="CMS1045" /db_xref="GeneID:6158719" CDS complement(1092398..1093459) /locus_tag="CMS_1045" /old_locus_tag="CMS1045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709788.1" /db_xref="GI:170781456" /db_xref="GeneID:6158719" /translation="MTYAPDDALAGFYALRDRVRERRLTIGVLGDSITEGQGATTLQH AYPAQLRDRLRGAYPSGARGGLDYIASRHQITVPADQGFAFAGTPTAGGRHGWGRRVV ALTEAAGPGTYTARMTSARVCWWAPGLDAAITVQVDGGAPETVRAEAGGSLTWTSPQL ESAEHEITVAWAGGKPELEGAWLFDGDEDRGIHVIEGGNSGSQLWQLSEKARPDGVST WIRSAPRFALDLWMPEHLINDVVVRTPEEVRSDAAVLIELIRSTSEAPILFTPPYERT TLPIRGTTWADYIGALRDAASADPLADVFEIGAYIPRMVGDGASDPYRWMGPDNHPND RGYARFAEVLAAKLSATPA" gene complement(1093899..1095935) /locus_tag="CMS_1046" /old_locus_tag="CMS1046" /db_xref="GeneID:6156943" CDS complement(1093899..1095935) /locus_tag="CMS_1046" /old_locus_tag="CMS1046" /note="Similarity to CMS1042 suggest local inverted duplication" /codon_start=1 /transl_table=11 /product="putative glycogen debranching enzyme" /protein_id="YP_001709789.1" /db_xref="GI:170781457" /db_xref="GeneID:6156943" /translation="MPLGLTLSDQGGTLRLVSHGASAVELTVSAADDPRRVAEVVAME RGDGGVWTGSSARLVPGTAYSVRVDGDPAPGDSFDPTRHLLDPYARGLVQVGPAAWRS VVTREVPAEERAARRAARPVVPRDRQVLYELHVRGFTKTDERLPEELRGTYAGLGHAS TVERLVDLGITTVELLPVHASTSEERLRAQGRINHWGYNTLAYLAPHAPYATRAARDA GADAVAAEFRGMVDALHAAGIQVVLDVVYNHTAEEGADGPVTSLRGIDGSRYYRHAPD GTPIDVTGCGNTVDLSRPDAQRLVLDSLEHWSDVMGVDGFRFDLAVTLGRDERVDFDP AHPLLRAIVEDEALAGLLMIAEPWDVGMGGWRTGGFGSGWSEWNDGYRDVVRDFWLAD VAASRRTGGAPNGVGALASCLAGSSGTFAADRGPLASVSFVTAHDGFTLADLTSYDRK HNSGNGESNRDGTDANRSWNHGVEGPTRDARILAARRRSSRNLLGTLLVSAGIPMITM GDERGRSQRGNNNGYCLDNAATWMRWDEDAWRMDLEATTRHLIRIRRDNPALRPVRYA EPDATVPSASVLAWRDADGAPMTEAAWESAGTRTLQWISTSTPETEGPNTVLVVVHGQ ETRATVTLPEHDGVTRWRLLWSSEWERPEVVSIDDAPGDRVEVDGPALRIYLAR" misc_feature complement(1094274..1095542) /locus_tag="CMS_1046" /old_locus_tag="CMS1046" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 4.2e-10" misc_feature complement(1095669..1095932) /locus_tag="CMS_1046" /old_locus_tag="CMS1046" /inference="protein motif:HMMPfam:PF02922" /note="HMMPfam hit to PF02922, Glycoside hydrolase, family 13, N-terminal, score 1.3e-14" gene 1095976..1097181 /locus_tag="CMS_1047" /old_locus_tag="CMS1047" /db_xref="GeneID:6156944" CDS 1095976..1097181 /locus_tag="CMS_1047" /old_locus_tag="CMS1047" /EC_number="2.8.1.7" /codon_start=1 /transl_table=11 /product="putative cysteine desulfurase" /protein_id="YP_001709790.1" /db_xref="GI:170781458" /db_xref="GeneID:6156944" /translation="MTVYLDHAATTPMRPEAIAALAGALTLVGNPSSIHSHGQEARRV LEEAREAIARALDADPVEVVLTSGGTESVNLGIKGLHGAQVTADPRRTRILVPDGEHH ATVDTVEWLERRGAVVERLPIDDLGRIRVDAVAAALAADPGSVSLLTFLAASNEVGTI QPVEELAALAASHGVPVHVDAVAALGHMPVPFRRWRDAGVHAVSVSAHKVGGPVGSGA LVLARQATVDPQIHGGGQQRQVRSGTQDAASAVAFATAVTLAVAELDAERVRLQALRD RLVATALRDVTGAVLRGDPDPAGRLPGNAHLTFAGCQGDSLLLLLDMAGVSVSTGSAC QAGVPEVSHVLLGMGIPEDEARGALRFTLGRTTTDADVDALLAALPDAVARASLAGLA GRAARKLGG" misc_feature 1096012..1097100 /locus_tag="CMS_1047" /old_locus_tag="CMS1047" /inference="protein motif:HMMPfam:PF00266" /note="HMMPfam hit to PF00266, Aminotransferase, class V,score 2.5e-55" misc_feature 1096573..1096632 /locus_tag="CMS_1047" /old_locus_tag="CMS1047" /note="PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site." gene 1097178..1098371 /gene="mnmA" /locus_tag="CMS_1048" /old_locus_tag="CMS1048" /db_xref="GeneID:6156945" CDS 1097178..1098371 /gene="mnmA" /locus_tag="CMS_1048" /old_locus_tag="CMS1048" /EC_number="2.1.1.61" /note="catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs" /codon_start=1 /transl_table=11 /product="tRNA-specific 2-thiouridylase MnmA" /protein_id="YP_001709791.1" /db_xref="GI:170781459" /db_xref="GeneID:6156945" /translation="MKILAAMSGGVDSAVAAARAVDAGHDVTGVHLALSRMPGTLRTG SRGCCTVEDSMDARRAADLLGIPFYVWDFSERFAADVVDDFVAEYQAGRTPNPCMRCN ERIKFAALLEKALDLGFDAVCTGHYADVLPGPDGQPELHRAAAWAKDQSYVLGVLTAE QIAHSYFPLGSTPSKAEVRAEAAARGIQVAQKPDSHDICFIPDGDTRGWLADRVGAEP GDILDGEGNAIGTHQGAAAFTVGQRKGLAIGTPAPDGRPRFVLEIRPKDNTVVVGPQE ALAIREIAGSSYTWAGTPPTRPDQPFDCDVQIRAHADPVPARAAVSVVDGSMQLVITP RDPLHGVAPGQTAVVYAGTRVLGQVTIDRTVSAVADARPPVRDAGPADAAPAAAALVG ATAGE" sig_peptide 1097178..1097228 /gene="mnmA" /locus_tag="CMS_1048" /old_locus_tag="CMS1048" /note="Signal peptide predicted for CMS1048 by SignalP 2.0 HMM (Signal peptide probability 0.770) with cleavage site probability 0.328 between residues 17 and 18" misc_feature 1097178..1098260 /gene="mnmA" /locus_tag="CMS_1048" /old_locus_tag="CMS1048" /inference="protein motif:HMMPfam:PF03054" /note="HMMPfam hit to PF03054, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, score 2.9e-148" gene 1098379..1100922 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /db_xref="GeneID:6159025" CDS 1098379..1100922 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /EC_number="6.5.1.2" /note="this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB" /codon_start=1 /transl_table=11 /product="NAD-dependent DNA ligase LigA" /protein_id="YP_001709792.1" /db_xref="GI:170781460" /db_xref="GeneID:6159025" /translation="MSDTTTGSDAADAAVPATTPADLEAASARVDELRAEIERHRDAY YGETGGTVSDAEYDALERELRAIEDAHPTLRSQDSPTQTVGGRAETTLFAPVTHAERM LSLDNVFSEEELAEWAAKVERDAGRGRVRYLSELKIDGLAINLRYEHGVLVTAATRGD GVVGEDVTQNVLTMGTVPERLAGSGHPPLVEVRGEIFFPVAEFDELNARQLEVGERVF ANPRNAAAGSLRQKEEGKSPARLELMHARIRRLRMLVHGIGAWPVRELERDAHVSAQS EVYGLLEAWGLPISTHFRVFDDIAEVAGFVRRQGADRAAVEHQIDGIVVKVDDLGLHE ELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRATPFAVMEKVEVAGSEVRQA TLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRTGKEHEFVMPTLCPECQTP LKPAKEGDIDLRCPNARSCPAQVRGRVEHVASRGALDIEGLGEVAAAALTQPLEPEDP PLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTPFRRKRVLKRDGAF DPAEPWGDEASVPSKSAEVLLENLEKAKTQDLWRILVALSIRHVGPVAARALAGWFGS LDVIRAASREELAAVDGVGGIIADALLDWFEVDWHREIVARWEKAGVVTAVPGHPGPG AAAAAGGVLAGLAVVATGSLEGYTREGALEAIMAAGGKAGSSVSKKTHYVAAGPGAGS KLGKAEALGVRIIDAAEFRLLVEQGPDAIALPEADPVPDAAETAPDGGSAEDATAATA GAAEAATAEAKPKRARKRKAPAAAAAAPPTDVEAGTAVHAEPDGPAETP" misc_feature 1098448..1099440 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /inference="protein motif:HMMPfam:PF01653" /note="HMMPfam hit to PF01653, NAD-dependent DNA ligase,score 1.6e-129" misc_feature 1098787..1098876 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /note="PS01055 NAD-dependent DNA ligase signature 1." misc_feature 1099444..1099692 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /inference="protein motif:HMMPfam:PF03120" /note="HMMPfam hit to PF03120, NAD-dependent DNA ligase OB-fold, score 2.8e-42" misc_feature 1099702..1099791 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /inference="protein motif:HMMPfam:PF03119" /note="HMMPfam hit to PF03119, Zn-finger in NAD-dependent DNA ligase, C4 type, score 4.2e-12" misc_feature 1100248..1100337 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /inference="protein motif:HMMPfam:PF00633" /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 1.4e-05" misc_feature 1100434..1100664 /gene="ligA" /locus_tag="CMS_1049" /old_locus_tag="CMS1049" /inference="protein motif:HMMPfam:PF00533" /note="HMMPfam hit to PF00533, BRCT, score 1.1e-07" gene 1101092..1102405 /locus_tag="CMS_1050" /old_locus_tag="CMS1050" /db_xref="GeneID:6158792" CDS 1101092..1102405 /locus_tag="CMS_1050" /old_locus_tag="CMS1050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709793.1" /db_xref="GI:170781461" /db_xref="GeneID:6158792" /translation="MGFLAPATTARVAPPPPAVLAGPDAADPTTGAHLPSPARVVQQL RDQDVSDRTLRDTAPVALLGALPALDVPELRRLARAIPATIRELVRRPPSVSSVAAWW SGLAQEERRDLTEGMPELVGNLEGIPLVERDAANRRLLDQRERELHASASTTSGRGAQ QALGADLAMLAEVRRALEPAAGGPARSLLTLDTTWPGRAGVVMGDLDTAAYVSIVVPG MFYSVSDRLVDWTDVAARLQQQQTTLLGPAAADGGVATISWIGYRTPDLLGVGSLDLA YEGAQYLEDAIQGIQGLRRDDPPYLSVIAHSYGSTAALLALSSGRASVDALAMVGSPG GAVRDAGELDVPAGRVFVGEAPWDPVVGSSYFGSDPGSASFGAEHFGVAGTGAAGGVS ADGSLAGVAGHNSYFDRGTESFRNLALIGIGRPVAHDLVADASGR" misc_feature 1101665..1102195 /locus_tag="CMS_1050" /old_locus_tag="CMS1050" /inference="protein motif:HMMPfam:PF06259" /note="HMMPfam hit to PF06259, Protein of unknown function DUF1023, score 3.1e-12" gene complement(1102507..1102948) /locus_tag="CMS_1051" /old_locus_tag="CMS1051" /pseudo /db_xref="GeneID:6156946" gene 1103004..1103387 /gene="gatC" /locus_tag="CMS_1052" /old_locus_tag="CMS1052" /db_xref="GeneID:6156947" CDS 1103004..1103387 /gene="gatC" /locus_tag="CMS_1052" /old_locus_tag="CMS1052" /EC_number="6.3.5.-" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase subunit C" /protein_id="YP_001709794.1" /db_xref="GI:170781462" /db_xref="GeneID:6156947" /translation="MPDTRPEPADATSGDETPQAPTTGSPTPTEQISREQVEHLAGLA RIRLSPEEIDTLTTELGLIVESVAKVTAVAGPDVPATSHPIPLVNVYRPDVPGETLTT AQALAGAPEHDGSRFKVSAILGEEQ" misc_feature 1103145..1103360 /gene="gatC" /locus_tag="CMS_1052" /old_locus_tag="CMS1052" /inference="protein motif:HMMPfam:PF02686" /note="HMMPfam hit to PF02686, Glu-tRNAGln amidotransferase, C subunit, score 8.4e-15" gene 1103395..1104945 /gene="gatA" /locus_tag="CMS_1053" /old_locus_tag="CMS1053" /db_xref="GeneID:6158711" CDS 1103395..1104945 /gene="gatA" /locus_tag="CMS_1053" /old_locus_tag="CMS1053" /EC_number="6.3.5.-" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit A" /protein_id="YP_001709795.1" /db_xref="GI:170781463" /db_xref="GeneID:6158711" /translation="MTDDLTRLSAADLADRLASRDVSSVDAVRAHLDRIDHVDGDVHA FLHVSGELALGRAAEIDAQRADGAPLGPLAGVPIAIKDVLCTIDMPSTAGSRMLEGWT PPYDATVVQRLRAAGLVPLGKTNMDEFAMGSSTEHSAFGATHNPWDLNRIPGGSGGGS AAAVAAFEAPVALGSDTGGSIRQPAAVTGSVGVKPTYGGVSRYGAIALASSLDQVGPV SRTVLDSALVHDVIGGHDPRDSTSLTDQWPSFAEAARAGQREGSVKGLRIGVVKQLDG EGFQAGVTQRFREALALLEQAGAEIVGVSAPNFEHAIAAYYLILPAEASSNLAKFDSV RFGLRVNPPGGGTVEDVMAATREAGFGPEVKRRIILGTYALSAGYYDAYYGSAQKVRT LIQRDFDAAFQQVDVLVTPSAPTTAFKLGEKLDDPLAMYLNDLTTIPANLAGVPGIGL PIGLAPEDGLPVGIQFMAPAREDARLYTVGAALEGILERQWGGPLLAQAPELARAATR TTLDGDTH" misc_feature 1103470..1104825 /gene="gatA" /locus_tag="CMS_1053" /old_locus_tag="CMS1053" /inference="protein motif:HMMPfam:PF01425" /note="HMMPfam hit to PF01425, Amidase, score 5.9e-195" misc_feature 1103743..1103766 /gene="gatA" /locus_tag="CMS_1053" /old_locus_tag="CMS1053" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1104945..1106447 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /db_xref="GeneID:6158709" CDS 1104945..1106447 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /EC_number="6.3.5.-" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /protein_id="YP_001709796.1" /db_xref="GI:170781464" /db_xref="GeneID:6158709" /translation="MAKAELMDYDEAIEMFEPVLGFEVHVELNTRTKMFSDAPNFFGG EPNTNITPVDLGLPGSLPVVNEQAVKHSISLGLALGCEIAPSSRFARKNYFYPDLAKN YQISQFDEPIAFRGSVEVEMPDGRIVTVPIERAHMEEDAGKLTHVGGATGRIQGADHS LVDYNRAGVPLVEIVTDIIYGAEGEAPELAKAYMSTIRDIVVALGISDAKMERGNLRC DANISLSPRGSGKLGTRTETKNVNSLRSVERAIRYEIQRQAAILAAGGTITQETRHWH EDTGRTSAGRPKSDADDYRYFPEPDLLPVQPSAELIEELRVALPESPAIRRRRLKAEW GFTDLEFQDVVNSGLLTELVDTVEAGAAPQAARKWWTGEIARIANARGVDAATLITAE QVASVIELVEAGTLTNRLARDVIEGVIDGEGTAQEVVDARGLAVVSDDGPLIAAIDEA LQAQPDVLAKIRDGKVQAAGAVIGAVMKAMRGQADAARVRELVLERAQAS" misc_feature 1104984..1105739 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /inference="protein motif:HMMPfam:PF02934" /note="HMMPfam hit to PF02934, GatB N-terminal region,score 6.1e-131" misc_feature 1105155..1105187 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1105788..1105994 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /inference="protein motif:HMMPfam:PF01162" /note="HMMPfam hit to PF01162, GatB, central region, score 2.8e-18" misc_feature 1105995..1106435 /gene="gatB" /locus_tag="CMS_1054" /old_locus_tag="CMS1054" /inference="protein motif:HMMPfam:PF02637" /note="HMMPfam hit to PF02637, GatB/Yqey, score 5.3e-40" gene 1106444..1108081 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /db_xref="GeneID:6158710" CDS 1106444..1108081 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /codon_start=1 /transl_table=11 /product="putative ABC transporter" /protein_id="YP_001709797.1" /db_xref="GI:170781465" /db_xref="GeneID:6158710" /translation="MTATLVAQRLSGGHGHRTLFSGLDLTVAPGDVVGLVGANGAGKS TLLRLLAGVDAPQDGRVILSPADAFIGWLPQEHERIPGETVAGYVARRTGCAEASAEL DRTAVALGEGAPGADDAYGTALDRWMASGAADLDERLPVTLAELGLNLDPELPTAGLS GGQAARVALAALLLSRFDIVLLDEPTNDLDLDGLARLESFVRGLRGGVVLVSHDREFL ARCVTTVVELDLAQDSVRVYEGGYDAFLEERQVARRHAREAYEQFADTKADLVSRART QREWSSQGVRNAMRKSPDNDKIRRKAAAESSEKQGQKVRQMESRIARLEEVEEPRKEW ELAFTIGQAPRSSAVVATLREATVTRGGFTLGPVSLQVEGGDRIGITGPNGAGKSTLL GLILGRIVPDTGDASPGRSVQVGEIDQARASLRGELPLAESFAEQVPDLSPAEVRTLL AKFGLRADHVTRPVDGLSPGERTRAGLALLQARGVNLLVLDEPTNHLDLPAIEQLEQA LDSYDGTLLLVTHDRRMLDAVRLDRHWHVDAGVVTGS" misc_feature 1106531..1107136 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.1e-39" misc_feature 1106552..1106575 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1106918..1106962 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /note="PS00211 ABC transporters family signature." misc_feature 1107566..1108063 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2e-35" misc_feature 1107587..1107610 /locus_tag="CMS_1055" /old_locus_tag="CMS1055" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1108100..1109749) /locus_tag="CMS_1056" /old_locus_tag="CMS1056" /db_xref="GeneID:6156948" CDS complement(1108100..1109749) /locus_tag="CMS_1056" /old_locus_tag="CMS1056" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001709798.1" /db_xref="GI:170781466" /db_xref="GeneID:6156948" /translation="MPSPIRLPRSIRTPVSLIAAAALVAGLGACTAQHDASEVLRPVT AAPDGPLTVVGQADDSGASVAMSESLFRQAPVAVLAPAGDLAAQELGAEAAVALGAPL IVQGAGAESEIQRLGSSGVLAVGDLGDDAASALPGSTTIVRADHAADVARLTGADVAD AADQDPSAAVTHVAGLAAPGGDASPATPPTASADDALPATAPAAALTGAHALATDAAS SLAAVATARAAGVGVTVVPEATPDPRASADAVTALHDAAATSTIAVGAAYADDASLEG RIRTAATGDQLPGGGQLVLPGKRYVALYGAAGTGALGVLGEQGPTDAVARAKAQAAEY QPYSDEPVIPMFELIATVAAGAAGDDGDYSSEVPVETLQPWIDAARDAGVYVVIDLQP GRTDFLTQAKRYESVLAQPGVGLALDPEWRLGPDQVPLKQIGSVSAAEVDATTDWLAG VVRDRGLPQKMLVLHQFRLSMIQDRASLDMGHPELAMLVHADGQGGQPDKQATWRALH ADAPAGMAWGWKNFIDEDKPMLTPEQTMREVSPVPDLITYQ" sig_peptide complement(1108100..1108270) /locus_tag="CMS_1056" /old_locus_tag="CMS1056" /note="Signal peptide predicted for CMS1056 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.426 between residues 57 and 58" misc_feature complement(1109660..1109692) /locus_tag="CMS_1056" /old_locus_tag="CMS1056" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(1109759..1110568) /locus_tag="CMS_1057" /old_locus_tag="CMS1057" /db_xref="GeneID:6156949" CDS complement(1109759..1110568) /locus_tag="CMS_1057" /old_locus_tag="CMS1057" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709799.1" /db_xref="GI:170781467" /db_xref="GeneID:6156949" /translation="MSAPPPKSPLPKSPLPKSPAPAPASAPPASVAPASPPPSVPPSA LPSAPSAPAWSWPTASGMRACAMAEPTTTPAMVPSMDPAIMPPMPIAAPPPARPPRGP RVRSSVPGARISERVAERASDSGRSSTGASPSAASELSWRKRISRCSGVSLRNASRCT SSIFSGGAVRRRYRYRSTAISSALRSRGAPSDARPGRPSGCSSRPRSLSRNPMVMPLA GAGSARVADRSGLLPPYGPGPGDAWEAGPHRPRGRRRRRLRTVRTPPPGLA" gene complement(1110681..1111643) /locus_tag="CMS_1058" /old_locus_tag="CMS1058" /db_xref="GeneID:6156950" CDS complement(1110681..1111643) /locus_tag="CMS_1058" /old_locus_tag="CMS1058" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709800.1" /db_xref="GI:170781468" /db_xref="GeneID:6156950" /translation="MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature complement(1110705..1111247) /locus_tag="CMS_1058" /old_locus_tag="CMS1058" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1e-41" misc_feature complement(1111506..1111571) /locus_tag="CMS_1058" /old_locus_tag="CMS1058" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(1111740..1113437) /gene="fadD" /locus_tag="CMS_1059" /old_locus_tag="CMS1059" /db_xref="GeneID:6156951" CDS complement(1111740..1113437) /gene="fadD" /locus_tag="CMS_1059" /old_locus_tag="CMS1059" /EC_number="6.2.1.3" /note="activates fatty acids by binding to coenzyme A" /codon_start=1 /transl_table=11 /product="long-chain-fatty-acid--CoA ligase" /protein_id="YP_001709801.1" /db_xref="GI:170781469" /db_xref="GeneID:6156951" /translation="MGGVTTPTDRPWLASYAPDVPHEIDLPQGSLVDIVDQSVLRFPG GTALDFLGAETSYRDLGEQIARAAQGLHDAGVRAGDPVAIVLPNCPQHVVAFYAVLRL GAVVVEHNPLYTPRELQHQFEDHGARTVIAWDRSVATILGLPDGARPERIVSVDVTRA MPLRTRLRLRLPVPKARAARAAIAAKVTGTITWERISAASPLPVDHPRPAATDLAVIQ YTSGTTGAPKGAELTHLNLSANAAQSRAWVPTVPRGTSVVYAALPMFHAYGLTLCLTF AMSMGSRLVLFPRFEPDLVLQAIRRHPPTFLPAVPPIYKRLREAAEAEGVSLAGISIS ISGAMALPESVVVPWEEQTGGWLVEGYGLSECSPVLMANPVGDTRRAGTVGLPLPNTE VRVVDPEDPTVDRPVGEAGELLVRGPQVFRGYHGRPDETAAVLLDGGWFRTGDVVTID EDGFVRIADRIKELIITGGFNVSPSEVEDAVRGIPGVRDAAVVGIPRDDGDEEVVAAV VLEEGATLDEQAARTTLRGELAAYKVPRLIVVLDELPTSLLGKVLRRKVREGIVDAG" misc_feature complement(1111962..1113272) /gene="fadD" /locus_tag="CMS_1059" /old_locus_tag="CMS1059" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 6e-126" misc_feature complement(1112430..1112495) /gene="fadD" /locus_tag="CMS_1059" /old_locus_tag="CMS1059" /note="Predicted helix-turn-helix motif with score 1082.000, SD 2.87 at aa 315-336, sequence KRLREAAEAEGVSLAGISISIS" misc_feature complement(1112754..1112789) /gene="fadD" /locus_tag="CMS_1059" /old_locus_tag="CMS1059" /note="PS00455 Putative AMP-binding domain signature." gene complement(1113505..1113951) /locus_tag="CMS_1060" /old_locus_tag="CMS1060" /db_xref="GeneID:6158684" CDS complement(1113505..1113951) /locus_tag="CMS_1060" /old_locus_tag="CMS1060" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709802.1" /db_xref="GI:170781470" /db_xref="GeneID:6158684" /translation="MSVTRRRMHCSPADVFEVLGDGWLFPSWVVGASRMRDVDAAWPA PGSRLHHSFGSWPLLIDDATTMLEWEPTRRLVMQPKGWPIGEARVTVEVRTLPDGCEV RMTEEAVRGPGRLVPAPIMDVLLHARNVETLRRLSYLAEGRHPRAR" gene complement(1114001..1114423) /locus_tag="CMS_1061" /old_locus_tag="CMS1061" /pseudo /db_xref="GeneID:6156952" gene complement(1114408..1118565) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /db_xref="GeneID:6156953" CDS complement(1114408..1118565) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /note="Seems to lack the appropriate stop codon." /codon_start=1 /transl_table=11 /product="Ftsk/SpoIIIE family protein" /protein_id="YP_001709803.1" /db_xref="GI:170781471" /db_xref="GeneID:6156953" /translation="MNRLVHRPSRVTRPLEQPEAEALSAPPAMLDGPQGGFPIQSLIP ILGATVSVTMMTLLRGQQIYMVIGALVLVVAAVGGLAMAFTQRSSSARTRRVQRERYL DYLERVRSRTRARAFEARAQAALLDPAPVALTEIVRDPARLWERRRSDADFLRVRLGS GTRRWLELALPAEPNPVEPYDPIMAAEAEQVVAQHEVVRGMPITVDLAGAGHVSVIGP REDVLNAARTLIAQLAVFHAPDDMVMALTFPERAAADWRGVDRLPHLVVEDVFDGPVP ARRVAPTPQALRTVIGEDLADRAQLAATARRGGLDQGPADIPRLVVFMDDYGSIAGSL PVPDAELDLRDLRITIVHLLSDRLHEPSDVTLRILVDGGSAVVSDARLAHPVSEVAPD RMPVALLDVLTRALAPLRLSMSRKDEAESARAIDISELLGIGEVGVLDPAITQAPRSP RDFLRVPVGLDDFGEPLLLDIKEASQLGIGPHGLCVGATGSGKSEFLRTFVLALASSH SPADLAMILVDYKGGAAFAPFASLPHVAGLIDNLADDPQLTQRARASLSGEVVRRQKM LKDAGNVPSITHYAELRSTRPELPGMPHLLLIIDEFGELLTAEPDLIDLLIQIGRIGR TLGIHMLLSSQRLEAGKLRGLDTYLSYRIALRTFSEAESSMIIDTNDAFRLPAVPGYS YLKFDTTLRRFRSGYVSGAIAESDPDPQATGSDAPRGMIRLPTYNGMATRESSQSAEE ALARPVVGRVLVDLAVERIRTRGEPVAPVWLPPLPERLTLASLVDRAEQYRALSVPVG VLDEPDRQRQEPWILDLTRSGGHAAVFGAPQSGRTTFLRTVVAGLALTHSPAQVAVYG LDFSGGGLSRVEGFPHVGGIATRTSRERLQRVAEEMRRMLTEREAVFSRHSIDSMATL RRVHAEGRVPEFDAADVVLVVDEAGALRGDHEELEPVVQELLQRGGSYGIHVVLALTR WNDLRTTLQPFIGTRIELRLNDALESLAGRRLSETLRAEQPGRAITDDRRFAQIALPV LETEPGLDVGDALERLARDTAERWQGERARTIRLLPENLPAALLPDAIEVPAAIPVGL AQDTMEPALLDHSGPDPHLLVFGDPGAGKSNLLRVLIDGSVQRSSSDELVVALIDIRG ALSDACPDEYLGGYAGDAAQATELVTAIAGELARRRAEHDTDAARILLVIDDHDIVAA SGTDALRPLLPFIASARDLRLTVAVARPVAGTSRAFFDIVLQSLRDNGATAVVVMSGE RSEGQIVPGIHAERMVPGRAPRAPRRPTAADPGGHAGRPRPRRGGSRACLRPGRPSSV PESAPRCASSSPARPGASAPPRPRPWCSRRCSAAPPGRRRSPTTRAARWAGASPSGTR PGRWIRA" misc_feature complement(1115212..1115235) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1115422..1116222) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /inference="protein motif:HMMPfam:PF01580" /note="HMMPfam hit to PF01580, Cell divisionFtsK/SpoIIIE protein, score 4.1e-28" misc_feature complement(1116649..1117257) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /inference="protein motif:HMMPfam:PF01580" /note="HMMPfam hit to PF01580, Cell divisionFtsK/SpoIIIE protein, score 3.1e-36" misc_feature complement(1117084..1117107) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1118311..1118379) /locus_tag="CMS_1062" /old_locus_tag="CMS1062" /note="1 probable transmembrane helix predicted for tmhmm2embl_unknown_000003_1114408_1118565 by TMHMM2.0 at aa 63-85" gene complement(1118562..1119455) /locus_tag="CMS_1063" /old_locus_tag="CMS1063" /db_xref="GeneID:6156954" CDS complement(1118562..1119455) /locus_tag="CMS_1063" /old_locus_tag="CMS1063" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709804.1" /db_xref="GI:170781472" /db_xref="GeneID:6156954" /translation="MGRLTSSMSTAAHMLLASPASAFREATEADAVVRVPLPVSRRVG FVQLAGGSGTSAASAAVAAALAARRTGVSLAVNASGGSTHILRRLPSETADPRERRDA LPTTLREAASDLVFPLPRLAALDLQRRDRPTTAADARTWFDEVNPISRFFDLVVTDWG VRPAAADLALTAVASHVLCLVCRAERHALEDVVAMVPALRAEPDPPRIVVVSVDVGAR GRHDARDVIAREVGVPLIGLPYDAAWSTAIPTASRRLSLASRTAVLRLASTVMTEAVA SLPSNSAPSDRPDDTRTAAVA" gene complement(1119458..1120768) /locus_tag="CMS_1064" /old_locus_tag="CMS1064" /db_xref="GeneID:6156955" CDS complement(1119458..1120768) /locus_tag="CMS_1064" /old_locus_tag="CMS1064" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709805.1" /db_xref="GI:170781473" /db_xref="GeneID:6156955" /translation="MSTFTRVTVLGSHRRADLVAPSDEAVASLIAQLVELLGERTESA ARPMTLIRASGDQLGAEESLDDQGVLAGDVLRLVRVDDAPAPPEVADVTDVVAEARDD QGALWGDVHRVSATCIGIALLSGVAGALLVSPTRLPVLGGVAVLLALAAAVLGLVRED RPALVVTAASAGLAVPATVAAVGTWMPQGGSLPVLAFGVAGAVWLVVGIGIGVGLRRR TLLRGSVVGVAASAVALGVDLLGWTVTQESAIVGTAAVVLIGLLPWYSMTASGLTGLD DLVIAGTLSDRDTLRGTVDESYRSLSWAALAAAVPAAIAASALVATEDPWPLALGVCL TLVLALRTRAFPLAWQSLPLWGAVAAVIVVAALAHAAERDAVAAGLGVIVLACAVIGV ARPSLQTRARLRRMGNRLETLAVVALVPCVIGVFGVYPSLLGTF" misc_feature complement(order(1119473..1119541,1119578..1119646, 1119656..1119715,1119734..1119793,1119803..1119871, 1119953..1120021,1120034..1120102,1120121..1120189, 1120217..1120285,1120298..1120360,1120373..1120441)) /locus_tag="CMS_1064" /old_locus_tag="CMS1064" /note="11 probable transmembrane helices predicted for CMS1064 by TMHMM2.0 at aa 110-132, 137-157, 162-184,194-216, 223-245, 250-272, 300-322, 326-345, 352-371,375-397 and 410-432" gene complement(1120765..1121022) /locus_tag="CMS_1065" /old_locus_tag="CMS1065" /db_xref="GeneID:6156956" CDS complement(1120765..1121022) /locus_tag="CMS_1065" /old_locus_tag="CMS1065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709806.1" /db_xref="GI:170781474" /db_xref="GeneID:6156956" /translation="MPTDPDVILLETIRTHRSRLRSAFIFGELTERRIVDDNSKRFIA SVVVAAVICAGCVGASFVGHLLGGAAPGATAGVVATPVPSP" misc_feature complement(1120831..1120899) /locus_tag="CMS_1065" /old_locus_tag="CMS1065" /note="1 probable transmembrane helix predicted for CMS1065 by TMHMM2.0 at aa 42-64" gene complement(1121012..1122169) /locus_tag="CMS_1066" /old_locus_tag="CMS1066" /db_xref="GeneID:6156957" CDS complement(1121012..1122169) /locus_tag="CMS_1066" /old_locus_tag="CMS1066" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709807.1" /db_xref="GI:170781475" /db_xref="GeneID:6156957" /translation="MAHALLGAVTCGRCGARVAATVSACARCTSPRLDAAPGTATGPY QGMLIGVVPATAGRRYAARAVDALPPLALLAAAAVGAFDGRWAVLVVAALVLAALLLI AANAVSSVRSGQTLGRRALRLRTVDDLSGAPLTAMDRLGRIPRVLRLRTTMTADLRAG RDPLGVARPPADALGEDASDADDAAPSVDEAVRRAHRRSAAPLAEAPVATAAALVLDS SERVSVSEPLMIGRKPEAQVDGVTYRVHPWADLSRTVAKSHALFAWSGSTMWITDLGS LSGTAIITAAGERRPLVAGVPTAASVGWIVELGRRRITIEPDASDTTSAASADAPAAA ARDIGGPDAGASAASGSATAPHPDAGSSATDRMAAPAAAPTPTERTSPRAD" misc_feature complement(1121519..1122013) /locus_tag="CMS_1066" /old_locus_tag="CMS1066" /inference="protein motif:HMMPfam:PF06271" /note="HMMPfam hit to PF06271, RDD, score 0.0011" misc_feature complement(1121846..1121914) /locus_tag="CMS_1066" /old_locus_tag="CMS1066" /note="1 probable transmembrane helix predicted for CMS1066 by TMHMM2.0 at aa 86-108" gene 1122357..1122698 /locus_tag="CMS_1067" /old_locus_tag="CMS1067" /db_xref="GeneID:6156958" CDS 1122357..1122698 /locus_tag="CMS_1067" /old_locus_tag="CMS1067" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709808.1" /db_xref="GI:170781476" /db_xref="GeneID:6156958" /translation="MGMKFAMGASTLTQLGQRTSSSHEDLGALVRRLEQSAAPLEGRF NGAGRQAFDQFKANTDSIAAELNAALAAVLEGIQGQDMAFQQGDSDMSDQTRAAQSGA GFDSARFSGRA" gene 1122717..1123031 /locus_tag="CMS_1068" /old_locus_tag="CMS1068" /db_xref="GeneID:6156959" CDS 1122717..1123031 /locus_tag="CMS_1068" /old_locus_tag="CMS1068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709809.1" /db_xref="GI:170781477" /db_xref="GeneID:6156959" /translation="MSGNSTDRRDYDIAASQSAQDEFQAVASHLESLLDQRDSDVKAA MADYQADGVSTEYAAKEARWNAVAQQVRDIIHALRQAMARNDETAQTAMSRGKAAVDS IG" gene 1123037..1124059 /locus_tag="CMS_1069" /old_locus_tag="CMS1069" /db_xref="GeneID:6156960" CDS 1123037..1124059 /locus_tag="CMS_1069" /old_locus_tag="CMS1069" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709810.1" /db_xref="GI:170781478" /db_xref="GeneID:6156960" /translation="MRDTEMDETRSTVADPMLHPLIDEQGDGYVVCRTAARVLHLSAL RAGLLADAGAAGSRVLVITPEDTRLTFASLGALRSFGGRWAVPSGGGLRLAGTTAVVA HAQEAFVSRIPGGWQTPPAPGSVPWTQVTITARHMLTGEFEMGSIAELIAAEAESRVD AWGVVEPAVSAFSPAGVTAWSRSRLPQTVRLLLHGDGLSGSIRVWSEPAAVFEETKLV VRGELSATRSAELLRLLQRAAQIHFAFVCTMHGAPDMTFTADVPAPVEPRAALVGPRA VRDKDFPTAALEWAALVERIGHPRTPSLLMSFGGGEAAAWADLATTARHLGPETIAAA FSGRPS" gene 1124056..1124445 /locus_tag="CMS_1070" /old_locus_tag="CMS1070" /db_xref="GeneID:6156961" CDS 1124056..1124445 /locus_tag="CMS_1070" /old_locus_tag="CMS1070" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709811.1" /db_xref="GI:170781479" /db_xref="GeneID:6156961" /translation="MNREWAIVSPRPVSMAECIVGAASVDPELGVTDLWDGGAAFVTR IGVPTHLTVTRSRELQHTGDAERILGGSVPVPGDEHELYWTDLHACGWGAEEDAALVE AIAAAADGSAHALAGEAGEGSHDELQH" gene 1124426..1124794 /locus_tag="CMS_1071" /old_locus_tag="CMS1071" /db_xref="GeneID:6156962" CDS 1124426..1124794 /locus_tag="CMS_1071" /old_locus_tag="CMS1071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709812.1" /db_xref="GI:170781480" /db_xref="GeneID:6156962" /translation="MTSYSIDPQGVRDVLTAVQKASDDLTTAVGGVSGAHDDVTSGAA TCTAVPASLAAFLDAQSAAVTDVTNRISACLFGAATATTDYVQADETMASDVTQAQTA AVDAASNGDFSWFTSRAGGR" gene 1124827..1127109 /locus_tag="CMS_1072" /old_locus_tag="CMS1072" /db_xref="GeneID:6156963" CDS 1124827..1127109 /locus_tag="CMS_1072" /old_locus_tag="CMS1072" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709813.1" /db_xref="GI:170781481" /db_xref="GeneID:6156963" /translation="MCRADGLIDPGSIPGVGMSPDLIRSAASTLATASTGVSQHGASA VASWQTMSTVYQAPESEALLAVMAPVGQETTALADGFTKVAKALKDFADTVEPIVVTL KDLQTQAVAFVALAEQGYDLPAVGDQPTTQLTDYGSVQTSPGGMYSSPAHHVEWTDYP PYNQRNDELIKAVAVQATALDEAQADCVNAIAAADPTRASCAVPVQGTDFTAAAVAGT ALPFGQMASGRQTCVGSFLGGAGDAVTSMAEGLGSLISYNPETSAWGDWGHAGASALG VVEGLGALIAPTPIFQMLADDSSGVTPGWMRDFSRSTVDKQRQMVEGFVGSGEQWESD PARAAGSLFVNVGSLLIPVGGEVAAGAKVVSVGARVASVGGRVAEAADAASVAGRVAG AGARATVAAGTGLVRVGDLLTQAMAKADAVGHAATAPVMNALRDAVGRVPLVRVVVEH AVTPEGFRVPAGLRVEVEGRVRSQIADAAGHGVLERGTVEAPAGSGHAPGVGRAAGAD AVRGVEQHGADARGGAEERATSESTPEEVRHHAGDAHASHSDQIGRHDRGGVTGDPSR GSDGIHSREATSVAHPLPSEPLDYFEDDYWRSLSPQEIHDLPVVRDGSHLRPDRSLEP STWYQAGEHEYLYRTNEHGHIDRVIIQDLQLKTHEGRLPHQRNPVGKLQGDHAGHLAA DAAGGSPKLDNIVAMSQKNNLVEYARLERKLLGRKAAHPDERIFLDIRLDPDPLTGRS PRFEVEYKINGRIYRSNFKQ" misc_feature 1126538..1128563 /note="submitted with no further information" gene 1127166..1127567 /locus_tag="CMS_1073" /old_locus_tag="CMS1073" /db_xref="GeneID:6156964" CDS 1127166..1127567 /locus_tag="CMS_1073" /old_locus_tag="CMS1073" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709814.1" /db_xref="GI:170781482" /db_xref="GeneID:6156964" /translation="MSIAMEFSEGAPDLSKIYVYVGSERGHSYANAFFEQAGEIVYAN DLRGVDSGDDRVSAVQRYLLKYLAEAEAQFEEAGAPSPTQYRLTYDLLTRQLDMQLSH ELVYSNHPTKVLEEGAEDWLDGRLEKMFGGF" gene 1127659..1127724 /locus_tag="CMS_1074" /old_locus_tag="CMS1074" /db_xref="GeneID:6156965" CDS 1127659..1127724 /locus_tag="CMS_1074" /old_locus_tag="CMS1074" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709815.1" /db_xref="GI:170781483" /db_xref="GeneID:6156965" /translation="MIAENLQLKTHIGRLRRKRRA" gene 1127755..1127868 /locus_tag="CMS_1075" /old_locus_tag="CMS1075" /db_xref="GeneID:6156966" CDS 1127755..1127868 /locus_tag="CMS_1075" /old_locus_tag="CMS1075" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709816.1" /db_xref="GI:170781484" /db_xref="GeneID:6156966" /translation="MIADWFGGSPKLDDRVSQFGDINRRAMRTSTDNGRGR" gene 1127952..1128092 /locus_tag="CMS_1076" /old_locus_tag="CMS1076" /db_xref="GeneID:6156967" CDS 1127952..1128092 /locus_tag="CMS_1076" /old_locus_tag="CMS1076" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709817.1" /db_xref="GI:170781485" /db_xref="GeneID:6156967" /translation="MFNGKSVFAESYRWGRECQELNKKPSRASPIVGYLLVSSMHAEP KG" gene 1128194..1128499 /locus_tag="CMS_1077" /old_locus_tag="CMS1077" /db_xref="GeneID:6156968" CDS 1128194..1128499 /locus_tag="CMS_1077" /old_locus_tag="CMS1077" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709818.1" /db_xref="GI:170781486" /db_xref="GeneID:6156968" /translation="MDASSSRMLRLQHQMVAVLRDAEKQLAQQGAGHPTEYRITYEPG PGRSDVQLSREIKYVDHPVKTLQNGPEDWLDGRLEKVFGKLLPPEDEWPKYRGKRKI" gene 1128555..1128755 /locus_tag="CMS_1078" /old_locus_tag="CMS1078" /db_xref="GeneID:6156969" CDS 1128555..1128755 /locus_tag="CMS_1078" /old_locus_tag="CMS1078" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709819.1" /db_xref="GI:170781487" /db_xref="GeneID:6156969" /translation="MGDRVAEAADVASVAGRVVGAGARVTVAAGSGLVRVEDLLTQAV AKADAVTPEGFRVPAGVRITPM" gene complement(1128790..1130238) /locus_tag="CMS_1079" /old_locus_tag="CMS1079" /db_xref="GeneID:6156970" CDS complement(1128790..1130238) /locus_tag="CMS_1079" /old_locus_tag="CMS1079" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709820.1" /db_xref="GI:170781488" /db_xref="GeneID:6156970" /translation="MGDIDAIVVGSGPNGLAAAVTMARAGLRVEVHERADTIGGGSRT AELTLPGFHHDICSAVHPMALASGFFRAFQLDRRIDLVVPEISYGHPLDGGVSGIAYR DIDRTADALGVDGRAWRQLMGSLAASADRVAQFTNGPLLQVPRHPPTAIRLGLRALEQ GSPLWNARFRGDVAPAMFTGIAAHAIQTMPSVSTAAAALSLGAYAHARGWPVPIGGSQ SIVDAMVADLRAHGGEVVTGSEVRTLHELPAARAVLLDTSARALSRIASDRLPARYLR AIRRFRYGNAASKVDFALSGPVPWTDPELRKAGTLHVGGTRAEIQRAEHEVAAGRHSD DPYVLVAQPSIDDPGRAPEGKHVLWAYTHVPAGSTVDQTEVITRQIERFAPGFRDLIL ASSSIDAVGMEEHDPNYIAGDIAAGAASVWQLLARPVLSPDPWRTPAAGVYLASSSAT PGPGVHGMAGYQAARSALRHEFGIERGPDLSM" gene complement(1130248..1131246) /locus_tag="CMS_1080" /old_locus_tag="CMS1080" /db_xref="GeneID:6156971" CDS complement(1130248..1131246) /locus_tag="CMS_1080" /old_locus_tag="CMS1080" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /protein_id="YP_001709821.1" /db_xref="GI:170781489" /db_xref="GeneID:6156971" /translation="MTRGIAVVTGGSAGLGRATVRELANRGWDVAVLARGEDGLAGAV ADIEARGRRGLGISTDVADRLAVEAAADRVEDELGPIDLWVNDAMVGVFGEFLTTDPA DFERATAVNYFGFVNGTRAALSRMVPRDSGHVIQVGSALAHRGIPLQAAYCAAKHAVQ GFTESVTTELIHNKSSVTISTVDMPALNTIQFNWVKSQLPHHPQPVPPIFEPEVGAQA IAAVAEKPKRRNWVGEPTVMTVLGNRFVANWLDGYLAKTGYSGQQAADKTQPMLTTNL YTPTAGDQGARGIFSDRARTMSPQVWIIRNRAKTVAIGAGALLSGVVAGAAALRRR" misc_feature complement(1130260..1130319) /locus_tag="CMS_1080" /old_locus_tag="CMS1080" /note="1 probable transmembrane helix predicted for CMS1080 by TMHMM2.0 at aa 310-329" misc_feature complement(1130488..1131231) /locus_tag="CMS_1080" /old_locus_tag="CMS1080" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.1e-41" gene complement(1131345..1133087) /locus_tag="CMS_1081" /old_locus_tag="CMS1081" /db_xref="GeneID:6156972" CDS complement(1131345..1133087) /locus_tag="CMS_1081" /old_locus_tag="CMS1081" /note="activates fatty acids by binding to coenzyme A" /codon_start=1 /transl_table=11 /product="long-chain-fatty-acid--CoA ligase" /protein_id="YP_001709822.1" /db_xref="GI:170781490" /db_xref="GeneID:6156972" /translation="MDGRCARATPGRIPYGGDMIFDADRPWVRSYADGVSADIPPVIG SLVDMVERSIQRHAKAVALEFFGRETTYREMGDHISRAAEGLRRLGVRKGDRVALVLP NCPQHIVAFYAVLRLGAIVVEHNPLYTPRELRHQFEDHGARVVIAWNTVVGTIQDMPR DVPVDTIVSVDLPAAMPLATRLKLRLPVPAARRARAAITAPVEDTVTWEQLVDHRRIA ASRPKPELDDVAILQYTSGTTASPKGAILTHRNLHANAMQGRAWVPGLADGGETVYGV LPMFHAYGLTLCLTFAMAIGARLVLFPKFDVDLVLAAARKHPPTFLPAVPPIYERLAR GAKEKRVDLTGVRFAISGAMNLPVSTVELWEGLTGGYLVEGYGLTETSPVALGNPIGP SRRPGTVGVPFPSTEVRVVDPEDPDVDRAPGEEGELLIRGPQVFQGYWRRPDETRAAL LDGGWFRMGDIVRVDADGFTTIVDRMKELIITGGFNVSPSEVEDVVRGAPGVQGVAVV GLPSADGGEDVTAAVVLDPGARLDEAAIRAYCREHLTAYKVPRRVVRVDALPTSLIGK VLRRQVREDLQREG" misc_feature complement(1131567..1132877) /locus_tag="CMS_1081" /old_locus_tag="CMS1081" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 2.1e-122" gene complement(1133098..1134057) /locus_tag="CMS_1082" /old_locus_tag="CMS1082" /db_xref="GeneID:6156973" CDS complement(1133098..1134057) /locus_tag="CMS_1082" /old_locus_tag="CMS1082" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709823.1" /db_xref="GI:170781491" /db_xref="GeneID:6156973" /translation="MGIPSARGVRVPRPTDIIISPLDGKRAVVTGGNSGLGLETARRL AAAGASVVLTSRDPERGEDAAGTIRDRHPGVHVEVGSLDLADLASVRAFADREVERGP IDILVDNAGVMAPPDRRETRDGFEIQLGTNHLGHFALTGLLLPALRAADAPRVVVVSS LAHWMGRIAFGDLQSERRYSPWAAYGQAKLANLLFMRRLQALSDERAWGLTSVAAHPG VTSTNLAKNGPGSGPQGVMSDLAAKFGPAAMGQDVRVGALPQIQAATGLGVHPGDYYG PAGPGGMRGMPHLAVSSPWSKDPELARRLWDASEQLTGVVYPA" misc_feature complement(1133179..1133979) /locus_tag="CMS_1082" /old_locus_tag="CMS1082" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.1e-19" gene 1134154..1134501 /locus_tag="CMS_1083" /old_locus_tag="CMS1083" /db_xref="GeneID:6156974" CDS 1134154..1134501 /locus_tag="CMS_1083" /old_locus_tag="CMS1083" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709824.1" /db_xref="GI:170781492" /db_xref="GeneID:6156974" /translation="MRRGRDGLEGERGSAETHAIGVGAVVVILDGAAATGDPALDGEP VGLVVASASDGLRSVSPVPTARGRAWVVELGSDDDGAAGRRVVVPQSALRLVDDADET VSALPADDLPPRA" gene 1134498..1135736 /locus_tag="CMS_1084" /old_locus_tag="CMS1084" /db_xref="GeneID:6156975" CDS 1134498..1135736 /locus_tag="CMS_1084" /old_locus_tag="CMS1084" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709825.1" /db_xref="GI:170781493" /db_xref="GeneID:6156975" /translation="MSGAVPGSDAGTVGTAGLVDPVDLAAELIRIDSTNPDLVAGAAG ETAVAAHVAAWLRARGFDVRVLEDAPGRPTVLATARGTGGGRTILLDGHLDTVPPGDP ERGGLRPRVEDGRLLGRGAFDMKAGLAAMMVAADRARRIGTRGDVVLALVADEEFASL GTEEALRALAAADTRIDGAVISEPSQSEAIVAHRGFGWYEVRLRGRAAHGSMPEQGVD AIAHAGLVLRDLDALAERLAAGPRHPLLGTGAVRVSRIHGGSDAATVADSCVLTLERR FLPGQSTADVEAELRTALDAVAARTPGMDAELGVLVARAAFEADVDGPLARAVLDSGM RVTGSPVPHRGEPFWTDAGLVHEAGIPCILLGVTGGGAHADEEWAEVDSVRQLADVLE GAILDFCGSDAALPTSRPVA" misc_feature 1134759..1134788 /locus_tag="CMS_1084" /old_locus_tag="CMS1084" /note="PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1." misc_feature 1134762..1135688 /locus_tag="CMS_1084" /old_locus_tag="CMS1084" /inference="protein motif:HMMPfam:PF01546" /note="HMMPfam hit to PF01546, Peptidase M20, score 1.4e-18" misc_feature 1135068..1135403 /locus_tag="CMS_1084" /old_locus_tag="CMS1084" /inference="protein motif:HMMPfam:PF07687" /note="HMMPfam hit to PF07687, Peptidase dimerisation domain, score 1e-22" gene 1135833..1136795 /locus_tag="CMS_1085" /old_locus_tag="CMS1085" /db_xref="GeneID:6156976" CDS 1135833..1136795 /locus_tag="CMS_1085" /old_locus_tag="CMS1085" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001709826.1" /db_xref="GI:170781494" /db_xref="GeneID:6156976" /translation="MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 1135905..1135970 /locus_tag="CMS_1085" /old_locus_tag="CMS1085" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 1136229..1136771 /locus_tag="CMS_1085" /old_locus_tag="CMS1085" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.4e-41" gene 1136853..1138946 /locus_tag="CMS_1086" /old_locus_tag="CMS1086" /db_xref="GeneID:6156977" CDS 1136853..1138946 /locus_tag="CMS_1086" /old_locus_tag="CMS1086" /codon_start=1 /transl_table=11 /product="putative dipeptidyl-peptidase" /protein_id="YP_001709827.1" /db_xref="GI:170781495" /db_xref="GeneID:6156977" /translation="MPRLGGLVLSPDGRRAVLTVTTLDAARTGYRHALWAVPASGGGV PRRLTRSAKSEAGAAFTASGDLLFVSSRPDADDAEEKDAAQLWILPADGGEARALTRL AGGVDGIAAVARDAATLILRAPLLPGSGSLEADAVERKKRSDLKVNAILHESYPVRYW DHDLGPDEPHLLALDLADALVEEPARPTTADAATALAAEAATEDGGSAAAAPAANAQP YPASLPRPRDLTPRPGRTLDHAAAAISPDGRTLVVAVGVKERRGDRQALVSIDVATGE RTTLLDVPGVDLEMPAISPDGALLAYMRTDRATPAAPTQQEIWVSALDGSGARRVAAG WDRWPSSLRFDADSQGLVVTADQDGRGPVFRIGLDDAVTQLMTDDHTYTDVQVDPGTG DVVALRSSWMAPAHPVRVSAADGSVTELATPAPVPATTGTMTEVETTAADGARVRGWL MLPDGASAEAPAPLLLWIHGGPLNSWNAWSWRWTPQVMVARGYAVLLPDPALSTGYGL DFIARGWDAWGEAPFTDLMSITDAVEARDDVDETRTAAMGGSFGGYMANWVAGHTDRF RAIVSHASLWALDQFGPTTDSSQYWQSIFSAQGLDRNSPHHSVRDIVTPMLVIHSDRD YRVPVGESLRLWSELAEHHASDDGTTPHRFLIFPDENHWILKPQQSVVWYRTVLAFLD QHVHGKDWVRPEALG" misc_feature 1138287..1138916 /locus_tag="CMS_1086" /old_locus_tag="CMS1086" /inference="protein motif:HMMPfam:PF00326" /note="HMMPfam hit to PF00326, Peptidase S9, prolyl oligopeptidase active site region, score 1.1e-45" gene complement(1138965..1139666) /locus_tag="CMS_1087" /old_locus_tag="CMS1087" /db_xref="GeneID:6156978" CDS complement(1138965..1139666) /locus_tag="CMS_1087" /old_locus_tag="CMS1087" /codon_start=1 /transl_table=11 /product="putative haloacid dehalogenase" /protein_id="YP_001709828.1" /db_xref="GI:170781496" /db_xref="GeneID:6156978" /translation="MDRTPLFPDRVDAVVFDVIGTLVDEDATWARVADEIAAEAGLAS ATELRRRREGNLDARMSAVVRGDAPWQPHAELMGAAAVEAVAGLGGDPTPGIRARAAR SDREHRAWPDVPEATAALRRERLVAGLSNGDLAALARLAHAEAIAWDAILSSGSVRTF KPAPAAYRHAIDALDLDPARTLFLAAHPWDLRAASAHGFRTAYVARPGAERPGAGDLV DLEVADLGELVRALA" misc_feature complement(1139046..1139636) /locus_tag="CMS_1087" /old_locus_tag="CMS1087" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 9.2e-16" gene complement(1139722..1140447) /locus_tag="CMS_1088" /old_locus_tag="CMS1088" /db_xref="GeneID:6156979" CDS complement(1139722..1140447) /locus_tag="CMS_1088" /old_locus_tag="CMS1088" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709829.1" /db_xref="GI:170781497" /db_xref="GeneID:6156979" /translation="MTDTTTDPARPADPDALAAYDAWHRARLAAVTSPFGSLALIQTT WLEPGREVSDLEALDGQPDTVQLTRIERTSLDTGEPEYGYRLWDSASPKNRAFEDIEV YPYAPEWILEGRFERVDDDRVIPFEHIADAGRTRELPVPGDIVVEIEGSEVRLSAFAD GDRLQLVFADATTGRESYAPSRFLFLPRPDGDGPVTLDFTRAVVPPCGFSDWMNCPLP PAGNRLTAAVRAGERQVVYRDEA" gene 1140555..1142309 /locus_tag="CMS_1089" /old_locus_tag="CMS1089" /db_xref="GeneID:6156980" CDS 1140555..1142309 /locus_tag="CMS_1089" /old_locus_tag="CMS1089" /EC_number="1.2.2.2" /note="catalyzes the formation of acetate from pyruvate" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase" /protein_id="YP_001709830.1" /db_xref="GI:170781498" /db_xref="GeneID:6156980" /translation="MARTVADQLISQLLAAGVSRIYGVVGDSLNPVVDAVRRTGGSRK GGIDWIHVRNEEAGAFAASAEAQLTGKLAVCAGSCGPGHLHLINGLYDAHRSGAPVLA IASHITTNQIGSGYFQETHPDRLFVECSHYTEMISTAVQAPRVVDQAMRHSLALGGVS VITLPGDVAEFEAEGEAPVFSVPRRPAIVPAEEDVRALAAAIDEAGSVAIFAGRGAGS AHAELMELADKIAAPVGHSLRGKDVIQHDNPFDVGMTGLIGYGAAAAGIAGADLLILI GTDFPYDQFLPGKEVRTAQIDIAPERLGRRTDVDIAIHGDALSTIRAVLPLVERKTDR RFLDKLLKEQDKKVEQVVGAYTTKAEKLTPIHPEYAASILDEVASDDAVFLSDTGMCN VWTARYITPNGRRRMLGSLVHGSMANALPMAIGAQIAYPERQVVSVSGDGGLSMLMGE LVTVAAYQLPVKVVVFNNSTLGLVKVEMLVDGIPDFGVDVPMVDYAAVAAALGIHSQR VEDPADIRGALEAAFAHDGPALVDLVTDPMALSIPPEITAAQVKGFALSMSKIVMNGG VGEAVKLARSNLRNIPRP" misc_feature 1140561..1141085 /locus_tag="CMS_1089" /old_locus_tag="CMS1089" /inference="protein motif:HMMPfam:PF02776" /note="HMMPfam hit to PF02776, Pyruvate decarboxylase,score 7.2e-53" misc_feature 1141134..1141577 /locus_tag="CMS_1089" /old_locus_tag="CMS1089" /inference="protein motif:HMMPfam:PF00205" /note="HMMPfam hit to PF00205, Pyruvate decarboxylase,score 5e-22" misc_feature 1141662..1142174 /locus_tag="CMS_1089" /old_locus_tag="CMS1089" /inference="protein motif:HMMPfam:PF02775" /note="HMMPfam hit to PF02775, Pyruvate decarboxylase,score 1.9e-06" gene 1142372..1142689 /locus_tag="CMS_1090" /old_locus_tag="CMS1090" /db_xref="GeneID:6156981" CDS 1142372..1142689 /locus_tag="CMS_1090" /old_locus_tag="CMS1090" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709831.1" /db_xref="GI:170781499" /db_xref="GeneID:6156981" /translation="MSQPVVVTAVFTPVEGKHDEAVAALSRGIAEVHEEEGCEVYAIH DAPDGTIVMLEKWSSEEDLDAHGAGEAVARMGASLAGLITGPAVVTRLTPIPAGSELQ GAL" misc_feature 1142408..1142593 /locus_tag="CMS_1090" /old_locus_tag="CMS1090" /inference="protein motif:HMMPfam:PF03992" /note="HMMPfam hit to PF03992, Antibiotic biosynthesis monooxygenase, score 2e-08" gene complement(1142705..1143784) /locus_tag="CMS_1091" /old_locus_tag="CMS1091" /db_xref="GeneID:6156982" CDS complement(1142705..1143784) /locus_tag="CMS_1091" /old_locus_tag="CMS1091" /codon_start=1 /transl_table=11 /product="putative integral membrane zinc-binding dehydrogenase" /protein_id="YP_001709832.1" /db_xref="GI:170781500" /db_xref="GeneID:6156982" /translation="MDEPDPPRPRGAPMRAVVYERFGETPVVRELPDPVPSAGGVVVR VEATGVCRSDAHGWLGHDDGIELPQVPGHELVGRIHQVGPEVTRFHVGDRVTVPFVCA CGRCAECRAGNGQVCRDQTQPGFTHWGSFAELVALHDADVNLIPVPDELDAGAAALLG CRFATAFRGLVHRARIRRGEHLLVIGCGGVGLSAVMIGVAVGAEVIAVDVDPAALARA SELGAEYTIDSSDLSELDVLDAIHAVSPDGVQVSVEALGRESTLRISVLALAPTGRQV QIGLFATEPTVPVPFVISQELSMHGSHGMPAHDYAELMAMVASGALKPELLIEHRITL DEAPAALEALASGDRSAGITLVEVG" misc_feature complement(1142711..1143724) /locus_tag="CMS_1091" /old_locus_tag="CMS1091" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 2.6e-84" misc_feature complement(1143176..1143241) /locus_tag="CMS_1091" /old_locus_tag="CMS1091" /note="1 probable transmembrane helix predicted for CMS1091 by Phobius" misc_feature complement(1143527..1143571) /locus_tag="CMS_1091" /old_locus_tag="CMS1091" /note="PS00059 Zinc-containing alcohol dehydrogenases signature." gene 1143834..1144208 /locus_tag="CMS_1092" /old_locus_tag="CMS1092" /db_xref="GeneID:6156983" CDS 1143834..1144208 /locus_tag="CMS_1092" /old_locus_tag="CMS1092" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709833.1" /db_xref="GI:170781501" /db_xref="GeneID:6156983" /translation="MTRTPAAPAFTRPSLAPGLLGAIVLLAGFAVIDGELFTVVRFAV AIFALIMIVFSVRARSWWSAALLAAVAVMWNPVAVIPVEAVTWQSLQYVAAIVFIAAG ILVKVPVDDAPTPGRPRTRAPR" sig_peptide 1143834..1143923 /locus_tag="CMS_1092" /old_locus_tag="CMS1092" /note="Signal peptide predicted for CMS1092 by SignalP 2.0 HMM (Signal peptide probability 0.848) with cleavage site probability 0.481 between residues 30 and 31" misc_feature order(1143870..1143929,1143942..1144001,1144014..1144073, 1144101..1144160) /locus_tag="CMS_1092" /old_locus_tag="CMS1092" /note="4 probable transmembrane helices predicted for CMS1092 by TMHMM2.0 at aa 13-32, 37-56, 61-80 and 90-109" gene complement(1144171..1144962) /locus_tag="CMS_1093" /old_locus_tag="CMS1093" /db_xref="GeneID:6156984" CDS complement(1144171..1144962) /locus_tag="CMS_1093" /old_locus_tag="CMS1093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709834.1" /db_xref="GI:170781502" /db_xref="GeneID:6156984" /translation="MAGRTAPGTLTRRRRILGIAIRHVPAVARSLRGTPAAGTRVVRF AAGQQGVPLEVAVWTPPGHDRSATGSPVLVVLARHDGDWLPSTLAKDLRAVVVTMAPD DDAQALGGLSWIASHAAGWNGTPERLGILGDGEGADRALRITALARDADGPAVLRLVL VSPSGDVPSVGSADHQGHGLDRLPDALVHVGAADPRLDHVVEGVAALKAAGMKARLVR IPRADQGWLAYPAADPALARRSLDEIVAYLRRGLTEERAFGVGPA" misc_feature 1144173..1144205 /locus_tag="CMS_1092" /old_locus_tag="CMS1092" /note="submitted with no further information" gene complement(1144962..1146053) /locus_tag="CMS_1094" /old_locus_tag="CMS1094" /db_xref="GeneID:6156985" CDS complement(1144962..1146053) /locus_tag="CMS_1094" /old_locus_tag="CMS1094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709835.1" /db_xref="GI:170781503" /db_xref="GeneID:6156985" /translation="MEEGEFTRDTNYIEDRILRDGSQGWPVEAGRYRLVAARACPWAN RSVIVRRLLGLEDAISLGLPGPTHDARSWTFDLDPAGRDPVLGTERLQESFFARFPDY PRGITVPALVDIPSGQVVTNDYPQITLDLSTEWTEHHREGAPDLYPVPLRAEIDEVAD LVFRDVNNGVYRCGFAGSQEAYEKAYDRLFGRLDWLSDRLATQRYLVGDTITEADVRL FTTLARFDAVYHGHFKCNRQKLDEMPVLWAYARDLFQTPGFGDTIDFVQIKQHYYLTH TDINPTRVVPVGPETWGWLEPHGREELGGRPFGDGTPPGPVREGERVPEGHGAVPRGE RETRPSEARASVSGTPVPGTADAGSAGPA" gene 1146475..1148541 /locus_tag="CMS_1095" /old_locus_tag="CMS1095" /db_xref="GeneID:6156986" CDS 1146475..1148541 /locus_tag="CMS_1095" /old_locus_tag="CMS1095" /note="C-terminus duplicated downstream." /codon_start=1 /transl_table=11 /product="putative helicase" /protein_id="YP_001709836.1" /db_xref="GI:170781504" /db_xref="GeneID:6156986" /translation="MLARAVREIEQAAQRGKLKPVNRTKFQVIAVLMREERTHAKDPA TPLSDPERAETLKRLDGIASILARTAARDTSVLPLLDPDAKLSETARAMRKHMLFDGG VEMVVEEEPEPEPEDPALAKLVERQVVPPSVKARVLANPFLEPDLDRPAPAAPPTRRL ANWELLGPLFKSFEYGAGGGIASMDLPESPRIDRLSPHGLELMRHQARFLESVRLGHR EFLLADEPGLGKTAQALLAASVADAYPLLVVVPNVVKMNWKREVERWTPHRRATVIHG DGLGLDAFADVVIVNYEVLDRHIGWLRTLGFRGMVVDEAHFIKNLQSQRSKFVLALAE SIRQRQSNPLLMALTGTPLINDIDDFRAIWQFLGWIDGDKPTSRLMGELEEAGLTPAD PGFFAEARRAVIDLGIVRRRKIDVATDLPSKRIADLPVELDDDLGRSIRQAERELAAR LVKRFTALVGARGTTVADVMDGPASERASLVRLVAQSELDEAKAQKTGENVFTMVRRI GQAKAVLAADYAAQLARSVGKVVFFAKHVDVMDQAEATFAKRELKSVSIRGDQSPAAR QNAIDSFQNDPEVKVVVCSLTAAGVGLNLQAASNVVLAELSWTSAEETQAIDRVHRIG QEEPVTAWRIIAAQTIDAKLAELIDGKAGLAARALDGEDFDEAGSTSVQLDALSHLLE EALAAG" misc_feature 1147078..1147554 /locus_tag="CMS_1095" /old_locus_tag="CMS1095" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 1.8e-06" misc_feature 1147087..1147926 /locus_tag="CMS_1095" /old_locus_tag="CMS1095" /inference="protein motif:HMMPfam:PF00176" /note="HMMPfam hit to PF00176, SNF2-related, score 1.2e-08" misc_feature 1148110..1148346 /locus_tag="CMS_1095" /old_locus_tag="CMS1095" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 1.3e-18" repeat_region 1148405..1148570 /note="Region correlating to C-terminus of CMS1093 duplicated downstream." misc_feature 1148650..1152268 /note="submitted with no further information" gene 1148699..1148830 /locus_tag="CMS_1096" /old_locus_tag="CMS1096" /db_xref="GeneID:6156987" CDS 1148699..1148830 /locus_tag="CMS_1096" /old_locus_tag="CMS1096" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709837.1" /db_xref="GI:170781505" /db_xref="GeneID:6156987" /translation="MVAGIACEEIVVPPTRGTTTSCEKRKKATTMLDDVKARVRREL" gene complement(1148843..1149469) /locus_tag="CMS_1097" /old_locus_tag="CMS1097" /db_xref="GeneID:6156988" CDS complement(1148843..1149469) /locus_tag="CMS_1097" /old_locus_tag="CMS1097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709838.1" /db_xref="GI:170781506" /db_xref="GeneID:6156988" /translation="MKKQLLTQVAAVAVLAMSSFAVTPSVYAEPSASRTPSKVQASMS HSNSAQTTHASILRDSAERRELASDLTRGPADRTTATTPYGQRVTYHLSGHALISFTY TPNGDALVDPGSEGGPGESLVGVGADPFPYISLDSSEQAAGAVGAARTIALAVCAAVG PETAGVGCGIGAGLGATVIGILTAHGICPGGQNLRIYLATLAAQCRHY" sig_peptide complement(1148843..1148926) /locus_tag="CMS_1097" /old_locus_tag="CMS1097" /note="Signal peptide predicted for CMS1097 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.948 between residues 28 and 29" gene 1149578..1149721 /locus_tag="CMS_1098" /old_locus_tag="CMS1098" /pseudo /db_xref="GeneID:6156989" repeat_region 1149585..1149750 /note="Region correlating to duplication of C-terminus of upstream CMS1093." gene 1149893..1151185 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /db_xref="GeneID:6156990" CDS 1149893..1151185 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /note="N/I" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001709839.1" /db_xref="GI:170781507" /db_xref="GeneID:6156990" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATITGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 1149941..1149964 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1150019..1150084 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature 1150706..1151164 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature 1151003..1151053 /locus_tag="CMS_1099" /old_locus_tag="CMS1099" /note="PS01043 Transposases, IS30 family, signature." gene complement(1151265..1151486) /locus_tag="CMS_1100" /old_locus_tag="CMS1100" /db_xref="GeneID:6156991" CDS complement(1151265..1151486) /locus_tag="CMS_1100" /old_locus_tag="CMS1100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709840.1" /db_xref="GI:170781508" /db_xref="GeneID:6156991" /translation="MTEPTIRNRRTRAVVLTAVITAFYLFATLVVAPLAAGENAMTRT FPAGVFGVPLFAFSYLVLLKIPRLLGRGR" misc_feature complement(order(1151298..1151366,1151379..1151447)) /locus_tag="CMS_1100" /old_locus_tag="CMS1100" /note="2 probable transmembrane helices predicted for CMS1100 by TMHMM2.0 at aa 65-87 and 92-114" gene complement(1151479..1151571) /locus_tag="CMS_1100A" /old_locus_tag="CMS1100A" /db_xref="GeneID:6156992" CDS complement(1151479..1151571) /locus_tag="CMS_1100A" /old_locus_tag="CMS1100A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709841.1" /db_xref="GI:170781509" /db_xref="GeneID:6156992" /translation="MAIVAAHGVCPNNQNYRIYILSLEGQCRND" gene complement(1151686..1151955) /locus_tag="CMS_1100B" /old_locus_tag="CMS1100B" /db_xref="GeneID:6156993" CDS complement(1151686..1151955) /locus_tag="CMS_1100B" /old_locus_tag="CMS1100B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709842.1" /db_xref="GI:170781510" /db_xref="GeneID:6156993" /translation="MTSSANTLRRRPQRQPDARQSERAHFRPGIRTLWRTRAQEALKE DRSFNPVQKEAMRSLSLKRLSLLVALTLVPLAAAAPAFASAPSAA" gene complement(1152062..1152238) /locus_tag="CMS_1100C" /old_locus_tag="CMS1100C" /db_xref="GeneID:6156994" CDS complement(1152062..1152238) /locus_tag="CMS_1100C" /old_locus_tag="CMS1100C" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709843.1" /db_xref="GI:170781511" /db_xref="GeneID:6156994" /translation="MILNFVLYPVMAIVAILIAFAVIGTRRSNPTQDAQDAVARERRA ARKAERQRRRTERG" gene complement(1152289..1153662) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /db_xref="GeneID:6156995" CDS complement(1152289..1153662) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709844.1" /db_xref="GI:170781512" /db_xref="GeneID:6156995" /translation="MTTTTSPRTRGQRLDALPWTRAHSRILGGSGVGWALDAMDVGLI SFVIAQLAVVWEADAGQLGLVASAGFLGMAIGASVGGLVADRIGRRQVFALTLLVYGV ATGVSALAMSVGALIALRFVVGLGLGAELPVASTLVSEFSPARIRGRVIVILESSWAV GWTAAALIGYLVITASDDGWRWALALGAVPAVWAIVVRLRLPESVRFLEAKGRHREAE RVVRDLEVAAGADPATDAAAASTAEARAADAATGTDAAPADATPRERLFGVRLRRRTL SLWIVWFCVNFAYYGAFIWLPTLLVAQGFSLVRSFEYTLLITLAQLPGYAVSAWIVEK WGRRVTLAVFLAGSAVSAGLFGTADSVTAILVFGALMSFSNLGAWGALYAVTPELYPT RVRATGAGSAAGFGRLASIAAPLCVPPLLALGGVALPFGVFAGVFALAAAAALTLPDL RGATLED" misc_feature complement(1152295..1153602) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.9e-48" misc_feature complement(order(1152337..1152405,1152508..1152576, 1152589..1152648,1152667..1152735,1152763..1152831, 1153060..1153128,1153141..1153209,1153246..1153314, 1153324..1153392,1153411..1153479,1153507..1153575)) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /note="11 probable transmembrane helices predicted for CMS1101 by TMHMM2.0 at aa 30-52, 62-84, 91-113, 117-139,152-174, 179-201, 278-300, 310-332, 339-358, 363-385 and 420-442" misc_feature complement(1152397..1153575) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature complement(1153222..1153299) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /note="PS00217 Sugar transport proteins signature 2." misc_feature complement(1153375..1153425) /locus_tag="CMS_1101" /old_locus_tag="CMS1101" /note="PS00216 Sugar transport proteins signature 1." gene complement(1153777..1154667) /locus_tag="CMS_1101A" /old_locus_tag="CMS1101A" /db_xref="GeneID:6156996" CDS complement(1153777..1154667) /locus_tag="CMS_1101A" /old_locus_tag="CMS1101A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709845.1" /db_xref="GI:170781513" /db_xref="GeneID:6156996" /translation="MRVQAETPAITMPDHQFTGEVRLRWLSTPQTPEQRAVVAAVTFP PGARTVWHSHVLGQTLHVTSGIARVGTRGGEVVEVGPGGSVYIEAGEEHWHGATAHAP MEHIAVLEDGDDPVDATTWGPHVTDEEFLRPAAPASVATPTATPAAALPVPLGAPVLV HALRYTAMYGEKPFDEALLVYLDNGSYKILSPGEEHYGSYVSASETGVAPRHVAFLSW PSDDWHRNVASHTLTFSDDTGAFIQSLVLPGDAVPRAQHGFAEVVADPERVDMTASWD TLRVTHAASFERLAERVRQL" gene complement(1154841..1157099) /gene="thiED" /locus_tag="CMS_1102" /old_locus_tag="CMS1102" /db_xref="GeneID:6156997" CDS complement(1154841..1157099) /gene="thiED" /locus_tag="CMS_1102" /old_locus_tag="CMS1102" /EC_number="2.7.4.7" /note="catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate" /codon_start=1 /transl_table=11 /product="multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase" /protein_id="YP_001709846.1" /db_xref="GI:170781514" /db_xref="GeneID:6156997" /translation="MIGLDLSVYLVTDPALCGARGVPAVVAAAVAGGATAVQIRDKHA SAAELLATVVAAADAIDAHASAHPTAPRPLLLVDDRVDVVLAALARGARVDGVHVGQS DVPADLVRRMLDAASPDRRLVVGLTANTPAHVEALRALPAGTVDYLGVGVIRPTSTKP DHPAPLGHDGFGIIAGLSPVPCVAIGGVDVRDVDAIAAAGGAGTAVVSAICAAEDPEA AARELAEARARARARPATTGDATDDPAEVVASSEDHAPPLRPVPRVLSIAGTDPTGGA GIQADLKSIAANGGYGMAVVTALVAQNTTGVREIHVPPVAFLRAQLDAVSDDVAIDAV KIGMLGSAAVVDEVAAWLGAVRPPVVVLDPVMVAQSGDALLDADATEALRRLLPLADV VTPNLPELAALLGEREADGWEAALAQGRTLATRHGVRVVVKGGHLRVDDCPDALVTPG AGGAGPTAHVVDGPRIATTSTHGTGCSLSSALATLQPRRDDWRAALTEAKAWLTGSLA HAEDLGVGSGAGPLDHLRALWDAAGTHAGPISAEMWAGSAGLRREIDDLPFVRRLGDG TLPEAWFSHYLAQDAIYLRAYSRVLARASQLAPAPDAQVVWARSAADAIAAESALHEE WLSRHPAPAVAGPVTRAYVDHLLAHAATSDYAVLVAALLPCFTIYADVGTRLRAAGSE AAAAGVAHPYAAWLATYADPAFAEATRRASELVDEAAVLAGPTRRAAMLEASLLSSAY ERDFFHAPEALG" misc_feature complement(1154847..1155464) /gene="thiED" /locus_tag="CMS_1102" /old_locus_tag="CMS1102" /inference="protein motif:HMMPfam:PF03070" /note="HMMPfam hit to PF03070, TENA/THI-4 protein, score 8.8e-20" misc_feature complement(1156419..1157087) /gene="thiED" /locus_tag="CMS_1102" /old_locus_tag="CMS1102" /inference="protein motif:HMMPfam:PF02581" /note="HMMPfam hit to PF02581, Thiamine monophosphate synthase, score 2.6e-31" gene complement(1157096..1157923) /gene="thiM" /locus_tag="CMS_1103" /old_locus_tag="CMS1103" /db_xref="GeneID:6159012" CDS complement(1157096..1157923) /gene="thiM" /locus_tag="CMS_1103" /old_locus_tag="CMS1103" /EC_number="2.7.1.50" /codon_start=1 /transl_table=11 /product="hydroxyethylthiazole kinase" /protein_id="YP_001709847.1" /db_xref="GI:170781515" /db_xref="GeneID:6159012" /translation="MSALRPSTGTITRGTPTSADLLLQLRERQPLVQCITNAVVTGFT ANVLLALGAAPAMTDVPTESGPFARIASGVLINLGTPHAEQREAAVEAAHAARDAGTP WVLDPVAVGALPVRTRLAHELVALSPTIVRGNASEIIALATGGAGGRGVDATDEVEAA LDAASLLARTYGTVVAVSGAVDHITDGHRLVRVHTGDAWLTKVTGGGCALGAVMTAFA STDPDPLRAAVAATSGYTIAADIAAEGARGPGSFAVGLLDALDAVTPELVAQSERLS" misc_feature complement(1157126..1157860) /gene="thiM" /locus_tag="CMS_1103" /old_locus_tag="CMS1103" /inference="protein motif:HMMPfam:PF02110" /note="HMMPfam hit to PF02110, Hydroxyethylthiazole kinase, score 2.3e-92" misc_feature 1158073..1160017 /note="submitted with no further information" gene 1158298..1158453 /locus_tag="CMS_1104" /old_locus_tag="CMS1104" /db_xref="GeneID:6159014" CDS 1158298..1158453 /locus_tag="CMS_1104" /old_locus_tag="CMS1104" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709848.1" /db_xref="GI:170781516" /db_xref="GeneID:6159014" /translation="MQYSDAILEIIKQVWQANVVEQFRQRRIDEFSGKMALRVKPVPS ATVIPSW" gene 1159213..1159353 /locus_tag="CMS_1105" /old_locus_tag="CMS1105" /db_xref="GeneID:6156998" CDS 1159213..1159353 /locus_tag="CMS_1105" /old_locus_tag="CMS1105" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709849.1" /db_xref="GI:170781517" /db_xref="GeneID:6156998" /translation="MFKNLAEYRFPWFGIFRQLLACVQRFNITIVAVDLDYRRGSMGK RL" gene 1159630..1159770 /locus_tag="CMS_1106" /old_locus_tag="CMS1106" /db_xref="GeneID:6156999" CDS 1159630..1159770 /locus_tag="CMS_1106" /old_locus_tag="CMS1106" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709850.1" /db_xref="GI:170781518" /db_xref="GeneID:6156999" /translation="MVLKPPCLGVLSRPGDRVPIRSMLKRRDFSDQVLYDAPSGGNSG GL" gene complement(1159991..1162156) /locus_tag="CMS_1107" /old_locus_tag="CMS1107" /db_xref="GeneID:6157000" CDS complement(1159991..1162156) /locus_tag="CMS_1107" /old_locus_tag="CMS1107" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="YP_001709851.1" /db_xref="GI:170781519" /db_xref="GeneID:6157000" /translation="MTDPAVPAVSSPASDSSATPPVAEQRPIERTFHGDTFVDRYEWL RDKDDADVIAHLEAENAYTDQATAHLEPLREQLFTEIKDRTQETDLSVPVREGDWWYY ARTVEGSQYAIRCRRPVAGPDDWTPPVIEPAADGTATPGEQVLLDSNAEADGHEFFSL GAFEVSPDGSLLAYSVDVEGDERFLLKIRDLTTGEDLADEIPGTSHGATFSAHGDHLF YVTVDDAWRPDTVWRHRVGSPASQDVKVFTEPDESYFVGFGMTRSRQYLVIEVGSKIT TEVLLLDAGDPTGAFRSVWPRRHGVEYDVDHAVIDGSDRLLILHNDGATNFELIDVPA DDPTSTTDRQVVIPHDDEVRLEDASAFADHLVISYRREGLTRVGVIPFDRVLDGEQLH EIAFDEPIYTVGTAGNPEFAQPTVRLGYTSLATPATTYDYVLATRELRLLKQQPVRGG YDPDDYVQTREWATAEDGTEIPLSVIYKRGLVHPGTPAPLLLYGYGSYEASIDPSFSI ARLSLLDRGMAFVIAHVRGGGEMGRRWYDEGKTLTKKNTFTDFVAAADHLIARGWTSP EKLVAEGRSAGGLLMGAVANIAPDRFAGILAGVPFVDALTSILDPSLPLTVIEWDEWG DPLHDPEVYAYMKSYTPYENVREGVEYPRILAVTSLNDTRVLYVEPAKWTTRLREVGA PVLLRTEMQAGHGGKSGRYDAWRERASDYAWVLDVAGLA" misc_feature complement(1159994..1160647) /locus_tag="CMS_1107" /old_locus_tag="CMS1107" /inference="protein motif:HMMPfam:PF00326" /note="HMMPfam hit to PF00326, Peptidase S9, prolyl oligopeptidase active site region, score 1.4e-93" misc_feature complement(1160417..1160509) /locus_tag="CMS_1107" /old_locus_tag="CMS1107" /note="PS00708 Prolyl endopeptidase family serine active site." misc_feature complement(1160822..1162099) /locus_tag="CMS_1107" /old_locus_tag="CMS1107" /inference="protein motif:HMMPfam:PF02897" /note="HMMPfam hit to PF02897, Peptidase S9A, prolyl oligopeptidase, N-terminal beta-propeller, score 2.9e-139" gene complement(1162166..1162393) /locus_tag="CMS_1108" /old_locus_tag="CMS1108" /db_xref="GeneID:6157001" CDS complement(1162166..1162393) /locus_tag="CMS_1108" /old_locus_tag="CMS1108" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709852.1" /db_xref="GI:170781520" /db_xref="GeneID:6157001" /translation="MRTRSGCRSPEAPMLGQVLLALVGLGILALSLPDATGDAPSAWW GVVGGALIVVGAIAAVVRGRRRRGSASGARR" sig_peptide complement(1162166..1162276) /locus_tag="CMS_1108" /old_locus_tag="CMS1108" /note="Signal peptide predicted for CMS1108 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.635 between residues 37 and 38" misc_feature complement(order(1162211..1162270,1162298..1162357)) /locus_tag="CMS_1108" /old_locus_tag="CMS1108" /note="2 probable transmembrane helices predicted for CMS1108 by TMHMM2.0 at aa 13-32 and 42-61" gene complement(1162467..1163915) /locus_tag="CMS_1109" /old_locus_tag="CMS1109" /db_xref="GeneID:6157002" CDS complement(1162467..1163915) /locus_tag="CMS_1109" /old_locus_tag="CMS1109" /codon_start=1 /transl_table=11 /product="putative maltokinase" /protein_id="YP_001709853.1" /db_xref="GI:170781521" /db_xref="GeneID:6157002" /translation="MIPDFLAAWMREQRWFASKGTEPRLERIGGWSFSDEGWFARIET HLIIDHGSAKPVLYQVPLTYRQAPLEELKPFHIGTTVEDDGVELHVYDGPHDPAYAWA LIRTILDDRDADVDETSLGATARGQRQPGVEIATVVGSHVLSGEQSNTSIIYDMVSAD GHAVNPMIVKVFRALHHGENPDVVLQSAIAGAGSRLVPQTMGSVLAEWSDSGREEGRA IGHVAFAQEFLPGVTDAWRVALRAAEADADFQAEARALGEATADVHATLAAALPTVEA TPDVIEGIMVSFRRRHATAEREVPEIAAFHDAISSVYDAAEKGEWPKLQRIHGDYHLG QVLSVPNRGWVLLDFEGEPMRPMHERSLADVTLRDVAGMLRSFDYVAGSYALAHPGKS AAAWASASRRAFVDGYIARSGTDLRANRALLDAFEIDKAVYEAIYEVRNRPGWLSIPL QAVARLATRSSTLGAVTTPGATGPREAGPLTS" misc_feature complement(1162740..1162763) /locus_tag="CMS_1109" /old_locus_tag="CMS1109" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1163940..1164209) /locus_tag="CMS_1110" /old_locus_tag="CMS1110" /db_xref="GeneID:6157003" CDS complement(1163940..1164209) /locus_tag="CMS_1110" /old_locus_tag="CMS1110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709854.1" /db_xref="GI:170781522" /db_xref="GeneID:6157003" /translation="MAPETSSYVPAPGRITMFSTTWCGYCRRLKAQLDRAGIGYDEVD IEQVPGTAELVEAINGGNQTVPTVLFPDGSSATNPSLADVTAKVA" gene complement(1164322..1165608) /gene="xyoA" /locus_tag="CMS_1111" /old_locus_tag="CMS1111" /db_xref="GeneID:6157004" CDS complement(1164322..1165608) /gene="xyoA" /locus_tag="CMS_1111" /old_locus_tag="CMS1111" /EC_number="1.1.3.41" /codon_start=1 /transl_table=11 /product="xylitol oxidase" /protein_id="YP_001709855.1" /db_xref="GI:170781523" /db_xref="GeneID:6157004" /translation="MTDTIEQGTAGTNWAGNYAYTAREVRTPTSVEELRAIVRDAPTI RVLGSRHSFNDIADSEVLVSLAELPADLVIDRDASTATFSAGLPYGKLAELLGAEGLA IHNLASLPHISVGGAIATATHGSGIGNGNLGTAVAALEMITADGETVTYRRGDDDFDG VVVGLGALGVVTRVTLDVEPSYLVRQRVFEGLSWDAFDENLEDVFGGAYSVSVFTRFG ETTDQVWLKSRVQLGVDGQPEDEVVVADYFGAPAATEERHPILGIDPVHSTSQLGVVG LWSDRLSHFKMGFTPSDGEEIQSEFHVPLDRAVEAVQALRAMGDRIRPILLVCELRAV AEDRLWLSPQYGQTTIGLHFTWKRDQEAVEALLVELEAAIRPFGARPHWGKVFTAEAA DIVPLYPRSGDFLALAERLDPTHKFRNAWYERSLLG" misc_feature complement(1165108..1165545) /gene="xyoA" /locus_tag="CMS_1111" /old_locus_tag="CMS1111" /inference="protein motif:HMMPfam:PF01565" /note="HMMPfam hit to PF01565, FAD linked oxidase,N-terminal, score 4.3e-28" gene complement(1165743..1168796) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /db_xref="GeneID:6159104" CDS complement(1165743..1168796) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /EC_number="3.2.1.23" /codon_start=1 /transl_table=11 /product="beta-galactosidase" /protein_id="YP_001709856.1" /db_xref="GI:170781524" /db_xref="GeneID:6159104" /translation="MTHALPYYEDFAPTSGAARRPRSCLHSDAPRIVLNGDWRFRLSP TPRGLSDEMADPAFDDSGWDEIPVPSHWVLGQDGRYGLPAYTNVQYPFPVEPPFVPDE NPTGDYRVEIEVPTDWQSLERVVLRFEGVESAFKVWLNGDEVGTAMGSRLSHEFDVTA SLRPGSNVLAVRVHQWSIASYLEDQDQWWMPGIFRDVTLLGRPIGGIDDAWTRAEYDH ETGAGTVHVEVDAEPSAFPVTFEVEDLGIHVTWDTPADVAPVHVDRVEPWSAESPTQY QGFLRTNVEALSIRLGFRTVRIEGDRFLVNGRRVVFHGVNRHEAHPERGRVFDEEHAR ADMLLMKQHNVNAIRTSHYPPHPRVLDLADELGFWVIDECDLETHGFEFGGWVGNPSD DPRFAEAYLDRIERTVERDKNHPSIVMWSLGNEAGTGRNLAAMSAWVHRRDPGRPVHY EGDYTGEYTDVYSRMYSNLQETESIGSDVIPGDLLGCTPGEGMRQRTKPFILCEYVHA MGNGPGQIAEYEDLVLRYPRLHGGFVWEWRDHGILTETADGEAFYAYGGDFGEVVHDG NFVMDGMVLPDDTPTPGLAEYKAVVQPIAFGLEREGGSASLVVENRYHSVSTALASLV WVLAVDGDDIATGVLDAEPVAAGETVRIPLPADALDAGDLRADGAEVWLTVQAILRDD EPWAEAGHVVAVQQFDLTPAPRPAVLARWVDADEDVIPDAGATRLTLGDGEFDLATGR LVRLGALEVDGPRLELWRAPTDNDRSDSSGSYELADPRLTFGKGVPGPSSEARWRQAG LDRLTHRVRSVKVGSGSLTVVVRTSAAQSFDSVDTTYCWTEGADGDLGLRVDIVPSAG WAISWPRVGILFDLPASVTNAEWFGTGPFESYPDSRRAALVGRFSSLVDDLGAVYSIP QETGHRSDLRELELGTFDGEHGIVIQARPDTAGRRPGFTASRHTPQELDRAAHPHELP ASEAVHLYIDAAQHGLGSRACGLDVLPEHQLWPSARTLELTIRSR" misc_feature complement(1165755..1166066) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /inference="protein motif:HMMPfam:PF02930" /note="HMMPfam hit to PF02930, Glycoside hydrolase, family 42, small chain, C-terminal, score 5.8e-20" misc_feature complement(1166094..1166660) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /inference="protein motif:HMMPfam:PF02929" /note="HMMPfam hit to PF02929, Glycoside hydrolase, family 42, small chain, N-terminal, score 2.8e-21" misc_feature complement(1167009..1167911) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /inference="protein motif:HMMPfam:PF02836" /note="HMMPfam hit to PF02836, Glycoside hydrolase, family 2, TIM barrel domain, score 9e-130" misc_feature complement(1167522..1167566) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /note="PS00608 Glycosyl hydrolases family 2 acid/base catalyst." misc_feature complement(1167684..1167761) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /note="PS00719 Glycosyl hydrolases family 2 signature 1." misc_feature complement(1167915..1168178) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /inference="protein motif:HMMPfam:PF00703" /note="HMMPfam hit to PF00703, Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich domain, score 0.015" misc_feature complement(1168188..1168715) /gene="lacZ2" /locus_tag="CMS_1112" /old_locus_tag="CMS1112" /inference="protein motif:HMMPfam:PF02837" /note="HMMPfam hit to PF02837, Glycoside hydrolase, family 2, sugar binding, score 2.8e-79" gene complement(1168933..1169901) /locus_tag="CMS_1113" /old_locus_tag="CMS1113" /db_xref="GeneID:6158782" CDS complement(1168933..1169901) /locus_tag="CMS_1113" /old_locus_tag="CMS1113" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709857.1" /db_xref="GI:170781525" /db_xref="GeneID:6158782" /translation="MTATEARPTTSETAAQKAEQKRAAQAAEAKVSRPSKTGSAPGAG TKPATRIIVTAILTLVALYFLVPVYYIVVAATKTTADLFSTNGFLFANMNLWQNLTMV FTYDGGIFVRWFLNSVLYAGVGALIATYFAAAGGYALAKYRFTGSNIVFGTILGGVLV PGTATALPLFLLFSSMGIANTYWSVLIPSLVSPFGLFLCRIYAQASVEDAVIESGRID GASELRIFHTLALRSMTPALVTVFLFQLVGIWNNYFLPLIMLADSKLYPITLGLNNWR SQVDRLPEFYQLTTGGVLVSIIPLIAAMIVLQRFWRGGLTDGAVKG" misc_feature complement(1168966..1169574) /locus_tag="CMS_1113" /old_locus_tag="CMS1113" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.00039" misc_feature complement(order(1168981..1169049,1169122..1169190, 1169293..1169361,1169389..1169457,1169482..1169550, 1169683..1169751)) /locus_tag="CMS_1113" /old_locus_tag="CMS1113" /note="6 probable transmembrane helices predicted for CMS1113 by TMHMM2.0 at aa 51-73, 118-140, 149-171,181-203, 238-260 and 285-307" gene complement(1169898..1170914) /locus_tag="CMS_1114" /old_locus_tag="CMS1114" /db_xref="GeneID:6157005" CDS complement(1169898..1170914) /locus_tag="CMS_1114" /old_locus_tag="CMS1114" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709858.1" /db_xref="GI:170781526" /db_xref="GeneID:6157005" /translation="MSVDTRPASGERAAARPVRAQRSGVSRGQLKKSQTIAPWVMLAP FLAVFVLTFVLPIIYAVFQSFTTVRREGLFGEQGVTTVFAGFENYSLALANDAFTASI GRVLLFGIVQVPVMIILCTILALLLESASAKWPQFFRAAYFMPYGVPGVIATILWGFL YIPGLSPIIDIGQMFGIQLDFLGADTVLWSIANIVTWTYTGYNMLIIIAQLKSIPGDV YEAARIDGAGAWRTAMSIQLPLIRPALVLATVFSIIGTLQLFAEPQVLATSAPAIDSQ YTPNLSAYTTAFAYNDYGVAAAQAVIIALAAFVLSFVFLAFTNRKPKEEREAAAARKK GARA" misc_feature complement(1169943..1170623) /locus_tag="CMS_1114" /old_locus_tag="CMS1114" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.00048" misc_feature complement(order(1169964..1170032,1170135..1170203, 1170288..1170356,1170429..1170497,1170534..1170602, 1170741..1170809)) /locus_tag="CMS_1114" /old_locus_tag="CMS1114" /note="6 probable transmembrane helices predicted for CMS1114 by TMHMM2.0 at aa 36-58, 105-127, 140-162,187-209, 238-260 and 295-317" misc_feature complement(1170198..1170284) /locus_tag="CMS_1114" /old_locus_tag="CMS1114" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1170911..1172266) /locus_tag="CMS_1115" /old_locus_tag="CMS1115" /pseudo /db_xref="GeneID:6157006" misc_feature complement(1172189..1172221) /locus_tag="CMS_1115" /old_locus_tag="CMS1115" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." /pseudo gene complement(1172386..1172646) /locus_tag="CMS_1117" /old_locus_tag="CMS1117" /db_xref="GeneID:6157007" CDS complement(1172386..1172646) /locus_tag="CMS_1117" /old_locus_tag="CMS1117" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709859.1" /db_xref="GI:170781527" /db_xref="GeneID:6157007" /translation="MILLFGTRARDALIVIVTFACLRCGVTSAQRVLHRTLRFTLFFV PLIPLRSTYRVECPNCGLETRLTKDQAMHALEWAVRNRGARR" gene 1172830..1173261 /locus_tag="CMS_1118" /old_locus_tag="CMS1118" /db_xref="GeneID:6157008" CDS 1172830..1173261 /locus_tag="CMS_1118" /old_locus_tag="CMS1118" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709860.1" /db_xref="GI:170781528" /db_xref="GeneID:6157008" /translation="MIVFVVVGAVGLLLLLSSVALGAALAIYGVGGLLADQAGIGSGG AIAIAVALALVALVVVQLTVRFVAKQESGGSYSPVGMVGVVTSPTSPTGGEVRLKHIR ELERRLAMSPEPLAVGTRIRVVSEDGFRVRVEPDADAAPTT" sig_peptide 1172830..1172907 /locus_tag="CMS_1118" /old_locus_tag="CMS1118" /note="Signal peptide predicted for CMS1118 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.544 between residues 26 and 27" misc_feature 1172839..1173240 /locus_tag="CMS_1118" /old_locus_tag="CMS1118" /inference="protein motif:HMMPfam:PF01957" /note="HMMPfam hit to PF01957, Protein of unknown function DUF107, score 0.00044" misc_feature order(1172842..1172910,1172938..1173006) /locus_tag="CMS_1118" /old_locus_tag="CMS1118" /note="2 probable transmembrane helices predicted for CMS1118 by TMHMM2.0 at aa 5-27 and 37-59" gene 1173293..1174744 /locus_tag="CMS_1119" /old_locus_tag="CMS1119" /db_xref="GeneID:6157009" CDS 1173293..1174744 /locus_tag="CMS_1119" /old_locus_tag="CMS1119" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709861.1" /db_xref="GI:170781529" /db_xref="GeneID:6157009" /translation="MDLISGGTTAIAVIVIIVILVALVAFIASRVRRVPPNQALVIVG RNAEKSEGGAGFSSPQKVIIGGRTFIWPIFQEGFTLSLEQYQTSVTAEARDANFINTA VVATVNFKVTGTEDGVRRAVQRYLLQQDALPEIVRQSLEGAIRGLIGDRPVDELVKSF SVVAQEAVNQTKNDLAELGLQIETLNVREITTPGSTYLDDRARSNAARARQIAEVAEA ENKRISALAAIENDQQTAERQLELDLRRAAIKADTDRANATAYAAGELAKAEQDRLVA DQERTAVAAQAEVSKERLRIDVELPAEARKYATVQDAQAARDAEKAKVDVEVYQRTQN AEAAKTAAVNEAASITALGKANADAIQARGQAEAEAAAALAEAQNKLSREALQARIIA SMPEIAREMAAPLANVDNMTIISADGANTLNRSVAENMATLPKLLKDTTGIDVATALS SFLGSTAAGTSAGAGSTSTDVGPGTAASEGAGI" sig_peptide 1173293..1173391 /locus_tag="CMS_1119" /old_locus_tag="CMS1119" /note="Signal peptide predicted for CMS1119 by SignalP 2.0 HMM (Signal peptide probability 0.984) with cleavage site probability 0.853 between residues 33 and 34" misc_feature 1173311..1173379 /locus_tag="CMS_1119" /old_locus_tag="CMS1119" /note="1 probable transmembrane helix predicted for CMS1119 by TMHMM2.0 at aa 7-29" misc_feature 1173383..1173958 /locus_tag="CMS_1119" /old_locus_tag="CMS1119" /inference="protein motif:HMMPfam:PF01145" /note="HMMPfam hit to PF01145, Band 7 protein, score 3.7e-11" gene 1174794..1176002 /locus_tag="CMS_1120" /old_locus_tag="CMS1120" /db_xref="GeneID:6157010" CDS 1174794..1176002 /locus_tag="CMS_1120" /old_locus_tag="CMS1120" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001709862.1" /db_xref="GI:170781530" /db_xref="GeneID:6157010" /translation="MRSTSPFRALWGANALSNLADGLVFVTMPLVAAGLTDDPRGVAG LATTYALVRLLVALPVGVYVDRLDRRTLIVVADALRGVAVLGLAVSIQSGVASLSVLY AVMAVVGVLESAADGAAVAVLPSIVPAGRLDRANARITGTQLVADEFVGPPLGGILFA LAAAVPVYATGGLWVAAGAVALALPRRTRDVPPSSEAPGAPPSVFREAAEGVRWLAGH RVVGSLALIGGLASVGYMLPFSVLVLFVDQRLGLDAAGYGVLLAVSALGGLAGSAIAA PLRARLGSCWTIMAALVLGARSLAALAVTRDPIVAGILLALYILHAVVWSICATSLRQ RLVPGDLLGRVGSAGRVVSLVGLAAGSALGGVLATVGIALPTIAGAVVFTGCAVLAVV ALRGAGEATS" misc_feature order(1174818..1174886,1174914..1174982,1175043..1175111, 1175262..1175330,1175457..1175525,1175553..1175621, 1175640..1175708,1175718..1175786,1175844..1175912, 1175922..1175975) /locus_tag="CMS_1120" /old_locus_tag="CMS1120" /note="10 probable transmembrane helices predicted for CMS1120 by TMHMM2.0 at aa 9-31, 41-63, 84-106, 157-179,222-244, 254-276, 283-305, 309-331, 351-373 and 377-394" misc_feature 1174821..1175900 /locus_tag="CMS_1120" /old_locus_tag="CMS1120" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(1176794..1177147) /locus_tag="CMS_1122" /old_locus_tag="CMS1122" /db_xref="GeneID:6157011" CDS complement(1176794..1177147) /locus_tag="CMS_1122" /old_locus_tag="CMS1122" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709863.1" /db_xref="GI:170781531" /db_xref="GeneID:6157011" /translation="MLQVAGLALATGTLLFGLGAVPASAQTIVPQAASGTTTLYLNST YEKTLSHLVRSVRVFGDGLPQAGACVAVDPPNNYFPNVGEGKITVSATGRYFVQNYID TSICGWRSVARETKG" sig_peptide complement(1176794..1176868) /locus_tag="CMS_1122" /old_locus_tag="CMS1122" /note="Signal peptide predicted for CMS1122 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.659 between residues 25 and 26" gene complement(1177590..1178339) /locus_tag="CMS_1123" /old_locus_tag="CMS1123" /db_xref="GeneID:6157012" CDS complement(1177590..1178339) /locus_tag="CMS_1123" /old_locus_tag="CMS1123" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709864.1" /db_xref="GI:170781532" /db_xref="GeneID:6157012" /translation="MLGTRREDAYTIIDAEAGVFLVRGAHVNWTILTEGSAMTLVDAG YPRDADAVLASLAEITARTGAGDLEAVLITHAHTDHIGGLERILAAVPNEPRVLCSAE ERAHVRREVVQQVTLQTALRHAYDPRVLAWLVAAVRHGGLEEVGYADVEDFALDAPLD VPGRPVPIATPGHTTGHSSFVLEHVGALITGDALVTGHATSRITGPQPLHDMFHADTV ASRSTFERLAAWPRPVRFLPGHGPLAASPSA" misc_feature complement(1177620..1178264) /locus_tag="CMS_1123" /old_locus_tag="CMS1123" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 6.2e-23" gene complement(1178549..1179481) /locus_tag="CMS_1124" /old_locus_tag="CMS1124" /db_xref="GeneID:6157013" CDS complement(1178549..1179481) /locus_tag="CMS_1124" /old_locus_tag="CMS1124" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709865.1" /db_xref="GI:170781533" /db_xref="GeneID:6157013" /translation="MPGRRASNAAPEPAGDPMRELKLVAAIARIEDAKALDPIVDRVK GVVTALLKPRALADLLHGVPFGHPLHPVAVLIPTGAWVSSAVLDFLPGNDKASRALVG VGVLSAAPSIVSGYADWSQLHEQQMRVGIVHSAANALATGLYGLSWIQRTRGKHTSGK VLGLAGLGLVSAGGFLGGHLAYRQAAGANHAEDVPHRFPAGWQELGHLAELPDGRLAK RDVAGLPLLVRRNGMTVDALSNTCSHLSAPLDEGELGTDPKTGEACVTCPWHDSVFSL KSGEVIHGPATAPQPRFETRVTAGLVEVRLPDAG" misc_feature complement(1178582..1178881) /locus_tag="CMS_1124" /old_locus_tag="CMS1124" /inference="protein motif:HMMPfam:PF00355" /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] region,score 7.9e-20" gene complement(1179534..1180265) /locus_tag="CMS_1125" /old_locus_tag="CMS1125" /db_xref="GeneID:6157014" CDS complement(1179534..1180265) /locus_tag="CMS_1125" /old_locus_tag="CMS1125" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709866.1" /db_xref="GI:170781534" /db_xref="GeneID:6157014" /translation="MSGTPARIGGNVLAGLVSAVRLARRPRPLHPHGVALAGTLTPVA GRAASGLAGLDGLDAPLEVDARFSRGGGLPAALPDVLGLALRIPDSGGTTVDVLLAST GLSPAGRFLLAPHRSVSGACLSTLMPYRGSAGPVLLGVLVDADPPLPAGADDLGRALA TRPVRMRLVHATPRGLWHVAARIELAHDSAGPLDTATRADPVLAAPPGDTTYPWTRRL RSPGYRIARHGRPVASRHVAHDPDA" gene 1180393..1181292 /locus_tag="CMS_1126" /old_locus_tag="CMS1126" /db_xref="GeneID:6157015" CDS 1180393..1181292 /locus_tag="CMS_1126" /old_locus_tag="CMS1126" /codon_start=1 /transl_table=11 /product="putative integral membrane tranport protein" /protein_id="YP_001709867.1" /db_xref="GI:170781535" /db_xref="GeneID:6157015" /translation="MDDSEADDPNRTSPRPAASGGWSRLSASRGFLLLWGAQSVSTLG ASSASFVLTLEVFRDTGSAVALAVLTVMSSAGNIYLAPLAGAFADRIGHRRAAILANV VLATASAVMATVSLIGPGRLLGLVYPLVLVSAIAASMLTLTLTASIRRMRQDADLTRI NGVTTLLQRAPVIVAPVVGAALYATVAPAYVYVVDGLTSLGCVAALLVVRWDAPPLAG PRRANPFPGARDGLAWILRHRGIREMQIGFAGLNLFNGLGVTATTAYVILLADRRWGS ASGLAAYNVSAAVGLVAGAALAG" misc_feature order(1180483..1180551,1180579..1180647,1180681..1180749, 1180777..1180845,1180906..1180974,1181131..1181199, 1181218..1181286) /locus_tag="CMS_1126" /old_locus_tag="CMS1126" /note="7 probable transmembrane helices predicted for CMS1126 by TMHMM2.0 at aa 31-53, 63-85, 97-119, 129-151,172-194, 247-269 and 276-298" gene 1181332..1181700 /locus_tag="CMS_1127" /old_locus_tag="CMS1127" /db_xref="GeneID:6157016" CDS 1181332..1181700 /locus_tag="CMS_1127" /old_locus_tag="CMS1127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709868.1" /db_xref="GI:170781536" /db_xref="GeneID:6157016" /translation="MPLVLGLVGRASLGVTDVLALVVAAGFVRNASIQLQGAPLAAVW QESAPPAQQGSILGGARLLGQGPYPLAVLGGGGGGLITLLAPLGQEEAMRVILVVAGT GEALCGLAMLSSRHVRALFS" sig_peptide 1181332..1181466 /locus_tag="CMS_1127" /old_locus_tag="CMS1127" /note="Signal peptide predicted for CMS1127 by SignalP 2.0 HMM (Signal peptide probability 0.674) with cleavage site probability 0.278 between residues 45 and 46" misc_feature order(1181527..1181595,1181614..1181682) /locus_tag="CMS_1127" /old_locus_tag="CMS1127" /note="2 probable transmembrane helices predicted for CMS1127 by TMHMM2.0 at aa 66-88 and 95-117" gene complement(1181817..1182713) /locus_tag="CMS_1128" /old_locus_tag="CMS1128" /db_xref="GeneID:6157017" CDS complement(1181817..1182713) /locus_tag="CMS_1128" /old_locus_tag="CMS1128" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709869.1" /db_xref="GI:170781537" /db_xref="GeneID:6157017" /translation="MSTDQYTFQDPTKMYAGIDPTAQQQDGPGLDADLDETADRSEKT YRGSNRLEGRKALITGADSGIGAAVAIAYAREGADVALSYLPEEEEDAKKVVALIEEA GRKAVAIPGDISTAEFSRELVAKAVEGLGGLDILVNNAGKQQNVDALEDISDEEFDLT FKTNVYAMFWITKAALPHLKPGSSIINTSSIQAYAPSPNLVHYATTKASINAFSKGLA GQLAPKGIRVNVVAPGPIWTPLQTAGGQPEDALPEFGEDTPLGRAGQPAELAPAYVFL ASNESSYVIGETLNVNGGMPTP" misc_feature complement(1181829..1182548) /locus_tag="CMS_1128" /old_locus_tag="CMS1128" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.4e-79" misc_feature complement(1182060..1182146) /locus_tag="CMS_1128" /old_locus_tag="CMS1128" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene complement(1182760..1183053) /locus_tag="CMS_1129" /old_locus_tag="CMS1129" /db_xref="GeneID:6157018" CDS complement(1182760..1183053) /locus_tag="CMS_1129" /old_locus_tag="CMS1129" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709870.1" /db_xref="GI:170781538" /db_xref="GeneID:6157018" /translation="MTVTDATITPSDDSTGDDTALDTEALANETVTNDAVAGETVLPD TDEPVEEPDDDAVMGADAEPTADALGVDGEAEPVLADNELAGQDIDLDDTPPA" gene complement(1183050..1183385) /locus_tag="CMS_1130" /old_locus_tag="CMS1130" /db_xref="GeneID:6157019" CDS complement(1183050..1183385) /locus_tag="CMS_1130" /old_locus_tag="CMS1130" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709871.1" /db_xref="GI:170781539" /db_xref="GeneID:6157019" /translation="MPERRHTLLEAERSVGRMDTDDPRLQPADTSDTNQDKDFISPSE DDTRVKQEQQITESEGVSDDVPAAADDVQVLPGSGGPDDVGEIDVDPAELNLSGDSIP GHPKPEAGE" gene complement(1183437..1183592) /locus_tag="CMS_1131" /old_locus_tag="CMS1131" /db_xref="GeneID:6157020" CDS complement(1183437..1183592) /locus_tag="CMS_1131" /old_locus_tag="CMS1131" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709872.1" /db_xref="GI:170781540" /db_xref="GeneID:6157020" /translation="MTDPHIPDAPRHPLAEPAPIDADSVAEEAEAAEEDAREDTPDPF GEGPDDQ" gene complement(1183594..1183914) /locus_tag="CMS_1132" /old_locus_tag="CMS1132" /db_xref="GeneID:6157021" CDS complement(1183594..1183914) /locus_tag="CMS_1132" /old_locus_tag="CMS1132" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709873.1" /db_xref="GI:170781541" /db_xref="GeneID:6157021" /translation="MGSMSDRDEQADGIRTGRGPGDPDGLVSVDDVVGDDGSPAGVGD AVRAPDGTGYGHAEEDTPEVEDADPASAAYPAVPDNRAVTASDSHMSAPADDASGHVD PEGR" gene 1184118..1185704 /locus_tag="CMS_1133" /old_locus_tag="CMS1133" /db_xref="GeneID:6157022" CDS 1184118..1185704 /locus_tag="CMS_1133" /old_locus_tag="CMS1133" /codon_start=1 /transl_table=11 /product="putative pyridoxal-dependent decarboxylase" /protein_id="YP_001709874.1" /db_xref="GI:170781542" /db_xref="GeneID:6157022" /translation="MTLSPHAAHPSDPTLDDPREDPLTAEADPAAELFSNRSLAGWDA ALRSAAAYVRAAARRADGPFTGITPDRLRGSFAGLDLDRPLGGLDDALDELDDLYLRD AVWFHDPSYVAHLNCPILIPAIAGELILSSVNTSMDTWDQSAGATLIERALIDWTAGR AGLGDEADGVFTSGGSQSNLQALLLARDEAAAVHGLAPGDRQRMRILVSDVGHFSVEK SSRILGLAPDAVVRVPSDDAKRMRVDALERELARCYAAGLLPVAVVATAGTTDFGSVD PLPAIGNVCRREGIWLHVDAAYGGGLLTSLRHRHLLDGIERADSVTVDYHKTFFQPVS SSALLVRDGRTLRHATLHADYLNPADRAHEEIPNQVDKSLQTTRRFDALKLWLTLRTV GADGVGRMLDDVIALADRTWSALRRDPALEVVVRPEISALVFRYVPAGERDGSAGPDA GARSDAVNRGIRQAIQDSGRAMVAATRVGGRAHLKLTLLNPATTDAHIAEILRMVVAA GDALDAGLGSDAPAAAEAGR" misc_feature 1184322..1185428 /locus_tag="CMS_1133" /old_locus_tag="CMS1133" /inference="protein motif:HMMPfam:PF00282" /note="HMMPfam hit to PF00282, Pyridoxal-dependent decarboxylase, score 5.8e-49" gene 1185701..1187083 /locus_tag="CMS_1134" /old_locus_tag="CMS1134" /db_xref="GeneID:6157023" CDS 1185701..1187083 /locus_tag="CMS_1134" /old_locus_tag="CMS1134" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001709875.1" /db_xref="GI:170781543" /db_xref="GeneID:6157023" /translation="MSAAASAPDRIHDVVVIGLGPANLGLACLADPLDDLDLVVLERK PRFDWHPGMMLPTAHLQTPFLADLVTLADPTSRFSFLAYLKDTGRLYSFYIRGDFFVL RSEYVAYCRWAAERARGIELDRDVRAIRYDETSGAYVVESVDAAGTAHVHRGRNLVVG VGTPPWLPEAVRDLPGVVHSSGYLGAKAALQERDAITVVGSGQSAAEIYRDLLEDVDS RGYRLDWITRSPRFFPLEYTRLTLEMTSPEYSDHFFGLPADARDMLLREQRNLYKGID SELIDEIFHTLYRKRLAFDALRAEGRLAPGGDAGSGVPTRLLTNAEVVSARPTPDGGA VLGLRHAETGAERDWPTGAVIMASGYDASAPRILDGLGDRVHRDARGRLDVAREHTVD DAGTLFVQNAEVHTHGFVAPDLGMTAHRNSRILRAITGREDYAVEERIAFQEFGLPDD VPAAGSGVLA" gene 1187080..1189593 /locus_tag="CMS_1135" /old_locus_tag="CMS1135" /db_xref="GeneID:6157024" CDS 1187080..1189593 /locus_tag="CMS_1135" /old_locus_tag="CMS1135" /codon_start=1 /transl_table=11 /product="putative siderophore biosynthesis protein" /protein_id="YP_001709876.1" /db_xref="GI:170781544" /db_xref="GeneID:6157024" /translation="MSAPALEASATTPPAESIAYVLDLRPLEPDADAALIHSWVTAPR ARFWQMEHATLDDVRAEYASIAADPRREAWIGLHDGAPAFLVEAYDPAEDPIGAHLDP LPGDRGMHLLVAPPAGDPLPGFTTAVMRHVVARLLRDPAVRRLVVEPDVRNTRIQRLN ELVGFRPLRVVDLGTKHALLSVATRDDALLHATPTDGPAMTLTPDRTRDAHPETRPAA ASRASEPNPRVHPAAHLRPDVWAAATRHLVRKALAEFAHELLIAPERVDPELAPGEPR RPHDPRRWAEYRVASADGRSRYEYRARILELDHWDVDEASVRRTVDGLPAELDATDLV LDLRDRLGITDDVLPVYLDEIQSTLSAAAFSRLRDVPDARGLLTASYAEVESTMDEGH PCFVATNGRIGFDLDDHDRYAPEAGADVRILWLAVNARLARFTAIDGLDREAFLDAEL GGSARARFRARMEALGVDPAERVLVPVHPWQWENVVTVTFAGLVARRDIVLLGTGDDE YGAQQSIRTWANRTSPERCYVKTSLSILNMGFTRGLSPAYMAVTPAINDWVHALVTGD AEFARLGFGILREVAAVGVRDERVDAALPPGHSHGKMLSALWRESPVPGLAEGERLMS MTSLLHVDAHGDTVLGALIDASGIGAAAWLRRWLDAYLVPLAHALIAHDLAFMPHGEN VILVLRDHVVVRVLMKDIAEEVALFDTERELPDDVRRIRMEIPEDERTLTVFTDVMDG FLRFAAALLEDRDDLGPDGLWRVAAEALADHERAHPELAERFSRLDLFAPSFDRSCLN RLQLRDNRRMVDLQAPVMQIHGSLRNPLAIHAGLRPRID" misc_feature 1188208..1189563 /locus_tag="CMS_1135" /old_locus_tag="CMS1135" /inference="protein motif:HMMPfam:PF04183" /note="HMMPfam hit to PF04183, IucA/IucC, score 5e-130" misc_feature 1188961..1188987 /locus_tag="CMS_1135" /old_locus_tag="CMS1135" /note="PS00148 Arginase family signature 2." gene complement(1189681..1190145) /locus_tag="CMS_1136" /old_locus_tag="CMS1136" /db_xref="GeneID:6157025" CDS complement(1189681..1190145) /locus_tag="CMS_1136" /old_locus_tag="CMS1136" /codon_start=1 /transl_table=11 /product="putative heat shock protein" /protein_id="YP_001709877.1" /db_xref="GI:170781545" /db_xref="GeneID:6157025" /translation="MNMTFDPFRELDRAMGALAETRQANRPMPIDLHREGDTYVLAAD LPGIDPGSVDIDVDGQLLTIRAERTLAGDQNVRWLTRERVAGTFLRQLTLGQGIDTER ISAHYANGVLSVTIPVSERAKPRKIAVTSDEQQGQGQDGQTLRVEQGAHAAS" misc_feature complement(1189756..1190055) /locus_tag="CMS_1136" /old_locus_tag="CMS1136" /inference="protein motif:HMMPfam:PF00011" /note="HMMPfam hit to PF00011, Heat shock protein Hsp20,score 6.3e-25" gene complement(1190281..1190679) /locus_tag="CMS_1137" /old_locus_tag="CMS1137" /db_xref="GeneID:6157026" CDS complement(1190281..1190679) /locus_tag="CMS_1137" /old_locus_tag="CMS1137" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709878.1" /db_xref="GI:170781546" /db_xref="GeneID:6157026" /translation="MKGPASERPAAREDPPVHARFSASLEVLRQEARDELDAVIEHRC RNGDDPWEVIPQLPTVDEHVVATLRQDVLEADGMAEELARVRDPSTEPGVVARFEYRL LRGIAMEHPDLSRAVWTLIGRMERDLRRRS" gene 1190761..1191453 /locus_tag="CMS_1138" /old_locus_tag="CMS1138" /db_xref="GeneID:6157027" CDS 1190761..1191453 /locus_tag="CMS_1138" /old_locus_tag="CMS1138" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709879.1" /db_xref="GI:170781547" /db_xref="GeneID:6157027" /translation="MTDTARPVALVTGATRGIGRAVAEDLARTHRVIVHGRDRDAVDA LAASLTDAVGWAADLAAGGLTDLVPGLDRLDVLVHSAGVIGGDAVDATPVEEWRRVFE VNVFAVAEVTRVLLPALRAAKGQVVLVNSGSGFTANPTGGVYAGSKFALRALGDALRE EERPNGVRVSSVHPGRVATDMQRELRAKEGGAYDETRYLEPASVARAVRLVVDQTRDG TLESVSLRPFGG" misc_feature 1190785..1191450 /locus_tag="CMS_1138" /old_locus_tag="CMS1138" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.1e-35" misc_feature 1191151..1191237 /locus_tag="CMS_1138" /old_locus_tag="CMS1138" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 1191569..1192219 /locus_tag="CMS_1139" /old_locus_tag="CMS1139" /db_xref="GeneID:6157028" CDS 1191569..1192219 /locus_tag="CMS_1139" /old_locus_tag="CMS1139" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001709880.1" /db_xref="GI:170781548" /db_xref="GeneID:6157028" /translation="MTSRSDADTRADAHVDASGVDAHVDASGVDASGIDWGSGGIETQ FGWSIQAVYQGFVRTAQAAVAHVPGGPRGYQVLVAITTEEPSSQLALAQRLGIDKTQM TYVIDALAEGGHVERQLHPRDRRIRQVVPTDAGRSLLATARVALGEVEDGLMRDLDPD ERVALRRLLARVAVGIGEAAGPAAEQSAIVGLEQPVAAPHRSRRPARRTPRDGEPS" misc_feature 1191779..1192084 /locus_tag="CMS_1139" /old_locus_tag="CMS1139" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.7e-12" gene 1192216..1193160 /gene="NCU06945.1" /locus_tag="CMS_1140" /old_locus_tag="CMS1140" /db_xref="GeneID:6157029" CDS 1192216..1193160 /gene="NCU06945.1" /locus_tag="CMS_1140" /old_locus_tag="CMS1140" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709881.1" /db_xref="GI:170781549" /db_xref="GeneID:6157029" /translation="MTTSSPAPASGPVVVAGATGDIGRRIVRELLAQDARVRVLTRPG STGAAETWGDDPRVEVVEAAYTDRAALIRGVAGARVVVSAVSGARAVIVGAQRALLSA AVAAGVPRFIPSDYSSDYRRVTPGTNRNFELRREFAADLDAAPIRATSVLNGAFADML TGQAPIVLFDRHRVLYWSSADQVLDFTTKDDTARVTALVALDDDAPRVVEVAGDRVTA RDIARTMTEITGTTFQLQWAGTTGVLSTAARTMRRVGRDEQETFPAWQGMQYLVSMYS GEAELLHVDRERFGTHTWTSVRDVLAAHVAERGATAAA" gene 1193299..1194315 /locus_tag="CMS_1141" /old_locus_tag="CMS1141" /db_xref="GeneID:6158839" CDS 1193299..1194315 /locus_tag="CMS_1141" /old_locus_tag="CMS1141" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709882.1" /db_xref="GI:170781550" /db_xref="GeneID:6158839" /translation="MSARSIQWQLAKRPTGEPTPDDVRRVEVDLPDLQDGEVRVENEF ISVDPYMRGRMNDVPSYVPPFQLDEAMTGSAVGRVVESRSDDLAVGTLVSHMLGWRDV AQGQAGGFRPVPEVPGVASSAHLGVLGLTGLTAYVGLTRIASIKEGDVVFVSGAAGAV GSMVGQIARLLGASRVVGSAGSAEKVERLTSHLGFDAAFDYHGGDLEAKLAEAAPDGI DLYFDNVGGDHLSAALGALKDFGRVANCGSISTYNSTGEEIAIRNTGRIVTRGLTLRG FTLGNHQDLAPEFASKMGPWLSEGRITADETVIDGIDRAFEAFTGLMRGENVGKMVVR TSAS" misc_feature 1193350..1194303 /locus_tag="CMS_1141" /old_locus_tag="CMS1141" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 3.1e-34" gene complement(1194263..1195447) /locus_tag="CMS_1142" /old_locus_tag="CMS1142" /db_xref="GeneID:6157030" CDS complement(1194263..1195447) /locus_tag="CMS_1142" /old_locus_tag="CMS1142" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709883.1" /db_xref="GI:170781551" /db_xref="GeneID:6157030" /translation="MPIRRRHVAPDDATPRADLEEAALHRRQRIGRELGWYACRRAVY GFMKHRGIDMTASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLAVLTSVLGDSA VDVIRDPVEQLADGPRSGVAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGRPLVKY RALMLGVTIALLVVSVVMVGMLLLTDEGARALGQQLGLGDTTLVVWAVVKWPLLVALL TGIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVAYVTHVATYESTYGVLG AVIVLLLWLYIGNLSLVLGGELDVEIIRARQLQAGIPAEHALRLPVRDTTRADRLARR RALLEDEGRRLREARSGPDASASEERRADAPPTLPEDDTREVRVRRRWSARPSSRRSR RA" misc_feature complement(1194530..1195309) /locus_tag="CMS_1142" /old_locus_tag="CMS1142" /inference="protein motif:HMMPfam:PF03631" /note="HMMPfam hit to PF03631, Ribonuclease BN, score 6.7e-39" misc_feature complement(order(1194566..1194634,1194662..1194730, 1194767..1194835,1194893..1194961,1195022..1195090, 1195208..1195276)) /locus_tag="CMS_1142" /old_locus_tag="CMS1142" /note="6 probable transmembrane helices predicted for CMS1142 by TMHMM2.0 at aa 58-80, 120-142, 163-185,205-227, 240-262 and 272-294" gene 1195521..1197122 /locus_tag="CMS_1143" /old_locus_tag="CMS1143" /db_xref="GeneID:6157031" CDS 1195521..1197122 /locus_tag="CMS_1143" /old_locus_tag="CMS1143" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709884.1" /db_xref="GI:170781552" /db_xref="GeneID:6157031" /translation="MRYTGRMVHTSSVEIERKYDVPDGVPVPAFAGIEGIAEARSAEP VTLVAVYLDTADHALADRRMILRRREGGHDAGWHVKLPADGGEGRTELGWPLQDGDGD DGAIPGPVLDQVAVHVRGRELTPLARLETVRTTVTLHDADGRAVAEFADDRVTGSDVR GGTVRAWHEWEVELLPDAPAKRKQRTALLDRIERHVLEVGARPSDSASKLARALGADA LGRQAPAGPALRDPATLTRESPASDVARAILARGVRDLVAADPRVRADEHDAVHRMRV AVRRLRSALRTHQDVIDPAATAPVRAELTALGAVLGGARDMEVLRDRVVWSVVEHDTG TVPDHVGDALHDVLDERYRRARERVVRALSSARYLALLDDLDALVADPPLAHDASSPA GPALHAALRRDAERVGRRAAVAQEAVGEAARTEALHEVRKAAKRLRYAAEEVSGRTVT VLGRKTMRLATAAEEVHDELGEHRDGIAMQRILRDEARRLAARGEDAFALGVLHEAER LRTESALWRAERAIERLLATAVPGA" misc_feature 1195554..1196126 /locus_tag="CMS_1143" /old_locus_tag="CMS1143" /inference="protein motif:HMMPfam:PF01928" /note="HMMPfam hit to PF01928, Adenylate cyclase, score 1.9e-12" misc_feature 1196250..1197083 /locus_tag="CMS_1143" /old_locus_tag="CMS1143" /inference="protein motif:HMMPfam:PF05235" /note="HMMPfam hit to PF05235, CHAD, score 6.7e-36" gene 1197119..1198786 /locus_tag="CMS_1144" /old_locus_tag="CMS1144" /db_xref="GeneID:6157032" CDS 1197119..1198786 /locus_tag="CMS_1144" /old_locus_tag="CMS1144" /codon_start=1 /transl_table=11 /product="putative carboxylesterase" /protein_id="YP_001709885.1" /db_xref="GI:170781553" /db_xref="GeneID:6157032" /translation="MRADRKLDRVTSDADVPTPAYDPSELDVEVTGGTVRGVRERGIE AWRGIPFAAPPRGDLRFRAPQPVLGWEGARFAQHFGKVAPQVSAGAFMGAPQGTPMGE DCLTVNVIAPSGLSPDAARVNRESQLRPVMVFIHGGAYVVGSSRENPVQGEGLVRQGG IVYVSFNYRLGALGYLDFSRYSRPDRPIESNLGLRDQVQALQWVRDNIRAFGGDPDNV TVFGESAGGNAVTTLMAVPAAHGLFARAIAQSSPTNAVYPAEQTARWAAEFVGLLAGR AGRAPDDAEAVRLLTAASASTLAAAANELMVRTPDEEPGTITFSPVIDGDVLPERPLD AFKHGRAARVPLIIGTNEREGSLFTGRLDILATTPPRIEAVFAKTDESHRAELAALYP GLPKRRAALDFGGDYAFWFPSIKVAERHARYAPVHFYRFDIAPRLVHLMGLDATHGLE LFALFDRMDSMLGRGMTLLGGRRAFVAAGERMRIAWLRFAQDGTVDESWPPYVGGDDD APGTGAADADAGASGERATLVFDVVDRVEHDPHAERRVAWRDFVPHI" misc_feature 1197119..1198711 /locus_tag="CMS_1144" /old_locus_tag="CMS1144" /inference="protein motif:HMMPfam:PF00135" /note="HMMPfam hit to PF00135, Carboxylesterase, type B,score 2.9e-106" misc_feature 1197422..1197454 /locus_tag="CMS_1144" /old_locus_tag="CMS1144" /note="PS00941 Carboxylesterases type-B signature 2." misc_feature 1197749..1197796 /locus_tag="CMS_1144" /old_locus_tag="CMS1144" /note="PS00122 Carboxylesterases type-B serine active site." gene 1198854..1200086 /locus_tag="CMS_1145" /old_locus_tag="CMS1145" /db_xref="GeneID:6157033" CDS 1198854..1200086 /locus_tag="CMS_1145" /old_locus_tag="CMS1145" /codon_start=1 /transl_table=11 /product="putative low-affinity phosphate transport protein" /protein_id="YP_001709886.1" /db_xref="GI:170781554" /db_xref="GeneID:6157033" /translation="MQAVRIDDCDIRSRDPVVDLTLIVVLVIALALFFDFTNGFHDTA NAMATPIATGALKPRVAVAIAAVLNLVGAFLSTEVAKTVSGGIIREGDGGVQITPTMI FAGLMGAIVWNLVTWLRGLPSSSSHALFGGLIGAAVVGAGLGSVDFGVVLSKVILPAL LAPVIAGLIAYTTTKLAYSITRRSSGPNERGGFRYGQIFTSSLVALAHGTNDAQKTMG IITLTLIAGGVQAAGSGPEFWVIAVCAVAIALGTYMGGWRIIRTMGSGLTEVKPAQGF SAEASTAATILASSHLGFALSTTQVASGSVIGSGLGRRGASVRWNTVGKIALGWLLTL PSAAVVGALAAFIASTGTVGFVIDAVVGVAVIVWIFWRSRRNAVDARNAIVEVDAAGF AVRGRKATKAARKAREAA" misc_feature order(1198911..1198970,1199031..1199090,1199133..1199201, 1199238..1199306,1199316..1199369,1199499..1199552, 1199565..1199633,1199829..1199897,1199907..1199966) /locus_tag="CMS_1145" /old_locus_tag="CMS1145" /note="9 probable transmembrane helices predicted for CMS1145 by TMHMM2.0 at aa 20-39, 60-79, 94-116, 129-151,155-172, 216-233, 238-260, 326-348 and 352-371" misc_feature 1198965..1199876 /locus_tag="CMS_1145" /old_locus_tag="CMS1145" /inference="protein motif:HMMPfam:PF01384" /note="HMMPfam hit to PF01384, Phosphate transporter,score 2.7e-87" gene 1200083..1200334 /locus_tag="CMS_1146" /old_locus_tag="CMS1146" /db_xref="GeneID:6157034" CDS 1200083..1200334 /locus_tag="CMS_1146" /old_locus_tag="CMS1146" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709887.1" /db_xref="GI:170781555" /db_xref="GeneID:6157034" /translation="MIDWSAFLVVAVAALVGAVAVVCLFSLGVRLLAVGTEYDDEGDK VSVTGIRPQAATVGGYVCFALSGLAVLYGVYLIIPALHS" sig_peptide 1200083..1200181 /locus_tag="CMS_1146" /old_locus_tag="CMS1146" /note="Signal peptide predicted for CMS1146 by SignalP 2.0 HMM (Signal peptide probability 0.904) with cleavage site probability 0.530 between residues 33 and 34" misc_feature order(1200101..1200169,1200248..1200316) /locus_tag="CMS_1146" /old_locus_tag="CMS1146" /note="2 probable transmembrane helices predicted for CMS1146 by TMHMM2.0 at aa 7-29 and 56-78" gene 1200456..1201931 /locus_tag="CMS_1147" /old_locus_tag="CMS1147" /db_xref="GeneID:6157035" CDS 1200456..1201931 /locus_tag="CMS_1147" /old_locus_tag="CMS1147" /codon_start=1 /transl_table=11 /product="putative permease" /protein_id="YP_001709888.1" /db_xref="GI:170781556" /db_xref="GeneID:6157035" /translation="MTEARTSSPAPETTGGRGALDRFFEITKRGSTYAREIRGGVLTF VTMAYIVVLNPLILGGFSADQATLDVDGNWLRASQVGAATALTAGVMTILFGLVARLP FAFAAGLGINSFLAVSVVGEVTWPEAMGLVVINGLVIVLLATTGLRTLIFRAVPRELK TAITVGIGLFIAFIGFVDSGFVRGTGVPASPLALGIDGSIASLPTVVFILGLVIMGVL MARRVPGALLIGIVATTLIAIVVEQVFHIGPSNTSGATGWNLNAPVLPGTPVSLPDLG LVGAFDFGAFGRIGIISSLMLVFTLVFTNFFDAMGAMTGLAKAADLSDERGDFPRLKG ALVVEGFGAVAGGATSSSSNTVFIESASGIGEGARTGLASMVTGVLFLLAMFFTPLTQ VVPLEVAAAALVIVGTLMASQIRDIVWTDFSVALPVFLTVLVMPLTYSIANGIGVGFL SWVLVRSFSGRAREVSPLLWVVSAGFLIFFARGPIEQLLGV" misc_feature 1200555..1201796 /locus_tag="CMS_1147" /old_locus_tag="CMS1147" /inference="protein motif:HMMPfam:PF00860" /note="HMMPfam hit to PF00860, Xanthine/uracil/vitamin C permease, score 2.3e-10" misc_feature order(1200570..1200638,1200681..1200749,1200762..1200830, 1200843..1200911,1200930..1200998,1201041..1201109, 1201128..1201196,1201308..1201376,1201569..1201637, 1201752..1201820,1201857..1201910) /locus_tag="CMS_1147" /old_locus_tag="CMS1147" /note="11 probable transmembrane helices predicted for CMS1147 by TMHMM2.0 at aa 39-61, 76-98, 103-125, 130-152,159-181, 196-218, 225-247, 285-307, 372-394, 433-455 and 468-485" gene 1202027..1203304 /locus_tag="CMS_1148" /old_locus_tag="CMS1148" /db_xref="GeneID:6157036" CDS 1202027..1203304 /locus_tag="CMS_1148" /old_locus_tag="CMS1148" /codon_start=1 /transl_table=11 /product="putative metal ion transport protein" /protein_id="YP_001709889.1" /db_xref="GI:170781557" /db_xref="GeneID:6157036" /translation="MTDLDTRGDVRGPQESAKRWRIVGPGLVVAATGIGAGDLVATLV AGSRFGYALLWAAVLGVIIKIFLVEGAGRYSLATGRTIFEGWRTVGRWTTWYFGPYIL IWGLVYGAAAMSSSALPLAALFPGVDLKVFAIACGLAGAVVVWFGRYSAFEKIIAVFV GLMFVTVVGAAVVTVPNVPALLTGLVPTVPEGGLVVALSIAGGVGGTITLAAYGYWLR EKGWVAPRWMKVMRIDNSVAYVMSGIFVLSMLVVGAELLYSADIALADGEGGLVQLAD VLGERYGAFMTWFFLLGFFATSFSSILGVWNGVSLMFADFLGTVRGLDVEDPRRRLGG SYYRAFIVWLTIPPIGLLFLDQPIGLIIAYGVLGALFMPFLAITLLVLLNTDRTPRAW RNRPLSNTVMGLSALLFVVLGIQQLVTEVGKLL" misc_feature order(1202084..1202152,1202180..1202239,1202300..1202368, 1202396..1202464,1202498..1202566,1202609..1202677, 1202735..1202803,1202876..1202944,1203041..1203094, 1203107..1203175,1203212..1203280) /locus_tag="CMS_1148" /old_locus_tag="CMS1148" /note="11 probable transmembrane helices predicted for CMS1148 by TMHMM2.0 at aa 20-42, 52-71, 92-114, 124-146,158-180, 195-217, 237-259, 284-306, 339-356, 361-383 and 396-418" gene complement(1203351..1203866) /locus_tag="CMS_1149" /old_locus_tag="CMS1149" /db_xref="GeneID:6157037" CDS complement(1203351..1203866) /locus_tag="CMS_1149" /old_locus_tag="CMS1149" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709890.1" /db_xref="GI:170781558" /db_xref="GeneID:6157037" /translation="MTKLLADRRVRFLIAGLLNTGLDFVLLNALILAAHMPVLAANLI SVTVGITISYFLNHFFVFRHGEPVTMRRFLKFFAVTGFSSLLLQSGVIWLFERGFDTT FGRSLLMFGTSAEQEFLEINIAKATAVLIGLVWNFTLYRLVVFRTPAPAAEAAADDAG SRAVRQSASAD" sig_peptide complement(1203351..1203470) /locus_tag="CMS_1149" /old_locus_tag="CMS1149" /note="Signal peptide predicted for CMS1149 by SignalP 2.0 HMM (Signal peptide probability 0.839) with cleavage site probability 0.731 between residues 40 and 41" misc_feature complement(1203432..1203836) /locus_tag="CMS_1149" /old_locus_tag="CMS1149" /inference="protein motif:HMMPfam:PF04138" /note="HMMPfam hit to PF04138, GtrA-like protein, score 7.8e-17" misc_feature complement(order(1203447..1203515,1203582..1203650, 1203687..1203755,1203765..1203833)) /locus_tag="CMS_1149" /old_locus_tag="CMS1149" /note="4 probable transmembrane helices predicted for CMS1149 by TMHMM2.0 at aa 12-34, 38-60, 73-95 and 118-140" gene 1204054..1204800 /locus_tag="CMS_1150" /old_locus_tag="CMS1150" /db_xref="GeneID:6157038" CDS 1204054..1204800 /locus_tag="CMS_1150" /old_locus_tag="CMS1150" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001709891.1" /db_xref="GI:170781559" /db_xref="GeneID:6157038" /translation="MSSLTIVIPTYEEARNVGELLPRLAAMAGQNPDFRITAMIVDDS SPDGTADLVRSLAPSVETDTFRVRVETRAEKAGLGAAYIWAFEKLLGADEPPTHILQM DADLSHDPAYITEMLRRVRGGADLVVASRYIRGGATPDWDLKRRFLSVGGNLYTRLFL GSRITDYTGGFNLYETQLLRRIRPSTITTTGYGFQIEMKQRALKTAKRPTEVAIVFMD RTEGESKIPSDTLVKNLLLVLQLRFGLRRG" misc_feature 1204066..1204602 /locus_tag="CMS_1150" /old_locus_tag="CMS1150" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 2.7e-19" gene complement(1204841..1205692) /locus_tag="CMS_1151" /old_locus_tag="CMS1151" /db_xref="GeneID:6157039" CDS complement(1204841..1205692) /locus_tag="CMS_1151" /old_locus_tag="CMS1151" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709892.1" /db_xref="GI:170781560" /db_xref="GeneID:6157039" /translation="MRRFLGIDLAWAEGTATRPARETGLACIDASGRVLDLTTARGID EVVAWVARWEDPGAVAAVDGPLVVANATGSRLAEKEVASRYGRLGISAYPSNTGRPAQ GAVVLRRRLEAAGWEYDDGSGAARDAGARTMLECYPYTTLVGAPELGFAGVKPRYKRL APLLATAERRPHRAAEFRVVLDAVAGLAHADPPLDVTTHPRAAALVADGPAIVERQHK HLEDLLDGLICAWTAAYWARHGLARSQVLGATDPVVDEHGRRGTIIAPARPHQRAPGD PLSAPAG" gene 1205798..1207315 /gene="aspA" /locus_tag="CMS_1152" /old_locus_tag="CMS1152" /db_xref="GeneID:6157040" CDS 1205798..1207315 /gene="aspA" /locus_tag="CMS_1152" /old_locus_tag="CMS1152" /EC_number="4.3.1.1" /note="catalyzes the formation of fumarate from aspartate" /codon_start=1 /transl_table=11 /product="aspartate ammonia-lyase" /protein_id="YP_001709893.1" /db_xref="GI:170781561" /db_xref="GeneID:6157040" /translation="MTPVSPNDDRIPTSDGHPVRTETDSLGSMDVPADAYWGIHTARA LDNFPISLRPLSVYPEFVVALAQVKQAAARANVQIGVLDARKAKQIDEVCTEIIAGHL HDQFVVGVIQGGAGTSTNMNTNEVIANRALERAGHALGDYQHMHPLDDVNRSQSTNDT YPTALKVALIHSLLQTLDELDLLRRSFLAKGAQFSQVLKVGRTQLQDAVPMTLGQEFH GFATTLEEDHARLGELVPLLSEINLGATAIGTGITADPNYAAAVRGHLSAITGYTLVT ASDLIEATSDAGVFMTLSSTLKRGAIKLSKICNDLRLLSSGPQAGLGEINLPPRQAGS SIMPGKVNPVIPEVVNQVAFSIAGADVTVTMAAEGGQLQLNAFEPVIAHSLLQSLSWL RNAAKTLRVNCIDGITANTERLAAQVESSVGVVTALTPYIGYAASSSLAKTALMTSAS IPDLVVEAGLMTRTQVEKILAPDRLSGLEPVTAAMSVITPEMLAAHAAEEGGQAD" misc_feature 1205876..1206871 /gene="aspA" /locus_tag="CMS_1152" /old_locus_tag="CMS1152" /inference="protein motif:HMMPfam:PF00206" /note="HMMPfam hit to PF00206, Fumarate lyase, score 8e-141" misc_feature 1206794..1206823 /gene="aspA" /locus_tag="CMS_1152" /old_locus_tag="CMS1152" /note="PS00163 Fumarate lyases signature." gene complement(1207394..1208395) /locus_tag="CMS_1153" /old_locus_tag="CMS1153" /db_xref="GeneID:6158613" CDS complement(1207394..1208395) /locus_tag="CMS_1153" /old_locus_tag="CMS1153" /note="Includes hydrophobic N-terminal region. Contains repetative region, repeat length approx 23 residues." /codon_start=1 /transl_table=11 /product="putative repetative protein" /protein_id="YP_001709894.1" /db_xref="GI:170781562" /db_xref="GeneID:6158613" /translation="MINRLLFLAGIGTGYVLGARAGRKRYEGIARTSRTVWASEPVQR GVRQVQTVLDEKGPVVVERTVETAREVADFVGHAVQGAAVAVGRTAHTVGERIGTTTQ DIAGRVGSTTQDIAGRVGSTTQDIAGRVGSTTQDIAGRVGSTTQDIAGRVGDTAKDLG TRTADQTKHVVDRVGQQATEVGQRVAETAEDVRGRVVETAEEARTRVQATAEDLRERG EEAGRRAVFTAAEARDEALASFDDEDETGPVAIPTEAADATAPTEAPAPAPAPAKPKA AAKKAAPKAKAAPTTSDAPHVPTPGDIAGSVHPEEPAHAAPADDATGTTPARTSDDA" misc_feature complement(1207760..1207969) /locus_tag="CMS_1153" /old_locus_tag="CMS1153" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 3.3e-05" misc_feature complement(1208012..1208233) /locus_tag="CMS_1153" /old_locus_tag="CMS1153" /inference="protein motif:HMMPfam:PF02987" /note="HMMPfam hit to PF02987, Late embryogenesis abundant protein, score 0.075" gene complement(1208439..1208576) /locus_tag="CMS_1154" /old_locus_tag="CMS1154" /db_xref="GeneID:6157041" CDS complement(1208439..1208576) /locus_tag="CMS_1154" /old_locus_tag="CMS1154" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709895.1" /db_xref="GI:170781563" /db_xref="GeneID:6157041" /translation="MTDQPQDPIHDHSIPEDADLSAPDAADPETDELHDATGRKGDAD A" gene complement(1208606..1209484) /locus_tag="CMS_1155" /old_locus_tag="CMS1155" /db_xref="GeneID:6157042" CDS complement(1208606..1209484) /locus_tag="CMS_1155" /old_locus_tag="CMS1155" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001709896.1" /db_xref="GI:170781564" /db_xref="GeneID:6157042" /translation="MKFAHLLADDGVTPRLAAIVSEGEALFLDEVLDDSPRDLQDLIE RGDDELARVRATVERAVASRTNTTPVDGLTHASAILRPPAVYAVGLNYSAHAEELNIT SASAPTVFALWPNSLSGHEGTTSWPRSLSEEVDYEVELGVVIGRAARDVSEADALDHV FGYTVVNDITARNLQFSEQQWSRCKSFDGFSPTGPVVVTRDEIADPQDLRITTVLDGE TVQDGRTSGMVRTVARLVSYLSTSSTLQPGTLISTGTTSGAGYSRDPQIFLKDGSTVT VSVEGIGSLTTHTRIL" misc_feature complement(1208693..1209190) /locus_tag="CMS_1155" /old_locus_tag="CMS1155" /inference="protein motif:HMMPfam:PF01557" /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) hydrolase, score 2.2e-54" gene complement(1209582..1212089) /locus_tag="CMS_1156" /old_locus_tag="CMS1156" /pseudo /db_xref="GeneID:6157043" misc_feature complement(1209675..1209896) /locus_tag="CMS_1156" /old_locus_tag="CMS1156" /inference="protein motif:HMMPfam:PF04679" /note="HMMPfam hit to PF04679, ATP-dependent DNA ligase,score 2.1e-12" /pseudo misc_feature complement(1209972..1210541) /locus_tag="CMS_1156" /old_locus_tag="CMS1156" /inference="protein motif:HMMPfam:PF01068" /note="HMMPfam hit to PF01068, ATP-dependent DNA ligase,score 3.4e-34" /pseudo misc_feature complement(1210446..1210472) /locus_tag="CMS_1156" /old_locus_tag="CMS1156" /note="PS00697 ATP-dependent DNA ligase AMP-binding site." /pseudo gene 1212159..1213178 /locus_tag="CMS_1158" /old_locus_tag="CMS1158" /db_xref="GeneID:6157044" CDS 1212159..1213178 /locus_tag="CMS_1158" /old_locus_tag="CMS1158" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709897.1" /db_xref="GI:170781565" /db_xref="GeneID:6157044" /translation="MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRY QRRCEVCGKVVDYAHIDKAFDDGDRTVVITEEDLSALPEEKSREIDVVEFVPSDQVDP VMLDRSYFLEPDSSSPKSYALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQ TLLWDDEVREADFPSLDAAPKVSPRELKMSAQLVEGFAEDFDPSKFSDEYQEQLKTLI DAKLAQGDSLDTDATFGEGSEEEDEGEGGEVLDLMDALKRSIERSRGGGSSGRKTAAR KDAPARKAAAKGKAKVKASDSGADQADRKAATKTASVKKPAAKKPAAKKPAAKKAPAA ERKSA" misc_feature 1212183..1212746 /locus_tag="CMS_1158" /old_locus_tag="CMS1158" /inference="protein motif:HMMPfam:PF02735" /note="HMMPfam hit to PF02735, Ku, score 8.7e-58" gene complement(1213195..1214157) /locus_tag="CMS_1159" /old_locus_tag="CMS1159" /db_xref="GeneID:6157045" CDS complement(1213195..1214157) /locus_tag="CMS_1159" /old_locus_tag="CMS1159" /note="Nu/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709898.1" /db_xref="GI:170781566" /db_xref="GeneID:6157045" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1213207..1213749) /locus_tag="CMS_1159" /old_locus_tag="CMS1159" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 1214362..1214565 /locus_tag="CMS_1160" /old_locus_tag="CMS1160" /db_xref="GeneID:6157046" CDS 1214362..1214565 /locus_tag="CMS_1160" /old_locus_tag="CMS1160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709899.1" /db_xref="GI:170781567" /db_xref="GeneID:6157046" /translation="MTRAKNASRTILIVVLGALVASLGGLAATLAAQGASPLALGSVI GIALVLLVVVGALGASGRRRRAR" misc_feature order(1214392..1214460,1214473..1214541) /locus_tag="CMS_1160" /old_locus_tag="CMS1160" /note="2 probable transmembrane helices predicted for CMS1160 by TMHMM2.0 at aa 121-143 and 148-170" gene complement(1214570..1215493) /locus_tag="CMS_1161" /old_locus_tag="CMS1161" /db_xref="GeneID:6157047" CDS complement(1214570..1215493) /locus_tag="CMS_1161" /old_locus_tag="CMS1161" /codon_start=1 /transl_table=11 /product="putative DNA glycosylase" /protein_id="YP_001709900.1" /db_xref="GI:170781568" /db_xref="GeneID:6157047" /translation="MDSPGAAAPAHVARTVLEVPAPFDGDGVIRFLSWHAVTGAEEGD TTSFTQSARLAHGAGTVTVRLVDREPGDEVTTRVEHAADAPELLAGTRRLLGLDVDAA RIDADLARDPALAAAVRATPGLRIPGTLDPRSTLFRTIVGQQISVASARATHRRMTAD LGEDLPGSVAHGSVTRLPPTAARIARDGAELLRGPARRTATLTRIAEALETGELMIEH GMPRAELRAALVAFHGVGPWTADYVAMRALGEPDILLSGDLIVRRGAAALGLPDEARA LDARAAAWSPWRSYATLHLWRVMTDGIPAAG" misc_feature complement(1215101..1215454) /locus_tag="CMS_1161" /old_locus_tag="CMS1161" /inference="protein motif:HMMPfam:PF06029" /note="HMMPfam hit to PF06029, AlkA, N-terminal, score 8.7e-09" gene 1215552..1216979 /locus_tag="CMS_1162" /old_locus_tag="CMS1162" /db_xref="GeneID:6157048" CDS 1215552..1216979 /locus_tag="CMS_1162" /old_locus_tag="CMS1162" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709901.1" /db_xref="GI:170781569" /db_xref="GeneID:6157048" /translation="MIDDDVIRTPHTPADADAVRAELVAALGDVVATDPASLEDARSD RSGYRSPAAPIAVVHATEVDHVVTTLRIASATGTPVVTRGAGTGLAGGATATAGEIVL SVRGMDRILEVSEADELAVVEPGVLNDDLNARLAPLGLWYSPDPASKAISTIGGNIAT NAGGLLCAKYGVTREAVLALTVVLADGRVVDTGHRTVKGVTGYDLTALMIGSEGTLGV LVRATVRLRPLPTATPSTVAAFFPDSASAAAAASAITAARIRPAAMELLDGGALEAID AFLGTDHSTRGSAHLLVRCDGPDAADEAARVVEVVVAGGGTADVTDDADEGERLLAIR RAFHPALAARGRVLIEDVAVPRSRLADMLTRIREIERETGLAIPTVAHAGDGNLHPNF LLPEDPTTPDGDATGIPDAVWHAADLLFHAAVDLGGTLTGEHGVGLLKRRWLADELGD DVMGLAAGIRRVFDPQGILNPGKAA" misc_feature 1215711..1216196 /locus_tag="CMS_1162" /old_locus_tag="CMS1162" /inference="protein motif:HMMPfam:PF01565" /note="HMMPfam hit to PF01565, FAD linked oxidase,N-terminal, score 2.5e-60" misc_feature 1216236..1216973 /locus_tag="CMS_1162" /old_locus_tag="CMS1162" /inference="protein motif:HMMPfam:PF02913" /note="HMMPfam hit to PF02913, FAD linked oxidase,C-terminal, score 2.8e-59" gene 1217124..1218308 /locus_tag="CMS_1163" /old_locus_tag="CMS1163" /db_xref="GeneID:6157049" CDS 1217124..1218308 /locus_tag="CMS_1163" /old_locus_tag="CMS1163" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709902.1" /db_xref="GI:170781570" /db_xref="GeneID:6157049" /translation="MTAHRPSPASPPPSMELPTPHASSRITASAVLGVVGVAVLLLVG LVVAAYLVLSLGIQAVAICALLALIPLAGVLLAIRWVDRWEPEPRLALLFALLWGAAA SVAIALLFDLVAQYARLAIGVPTQYTEFLQLAVQAPVVEESAKAIGLLLIFWVARRHF DGPVDGVVYGATIAAGFAFTENIVYFGGPLVSGTTGTLVGTFVLRGLFSPFAHVTFTM ITGIAIGYGARRGPGAALGFGASGLVGAIVLHALWNTGVTITGDFLSFYVLLQVPIFA FLVTVVILLRRYEIHLTRRRLREYAAVGWFTPAEVEMLSTWQGRRRARLWARTRGGDA GRAMGLFTRDATRLAFARQRMLSERPAASGRSEAGHLDDERRLLRAVTGHREALLRGG RR" sig_peptide 1217124..1217267 /locus_tag="CMS_1163" /old_locus_tag="CMS1163" /note="Signal peptide predicted for CMS1163 by SignalP 2.0 HMM (Signal peptide probability 0.758) with cleavage site probability 0.548 between residues 48 and 49" misc_feature order(1217211..1217279,1217289..1217357,1217394..1217462, 1217520..1217588,1217622..1217690,1217733..1217801, 1217814..1217882,1217910..1217978) /locus_tag="CMS_1163" /old_locus_tag="CMS1163" /note="8 probable transmembrane helices predicted for CMS1163 by TMHMM2.0 at aa 30-52, 56-78, 91-113, 133-155,167-189, 204-226, 231-253 and 263-285" gene 1218442..1218675 /locus_tag="CMS_1164" /old_locus_tag="CMS1164" /db_xref="GeneID:6157050" CDS 1218442..1218675 /locus_tag="CMS_1164" /old_locus_tag="CMS1164" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709903.1" /db_xref="GI:170781571" /db_xref="GeneID:6157050" /translation="MLGSSTPTPPQSAEKDPSTWVTGDEPMTGAQRSYLDSLATQAGE EIPADLNKAEASEQIERLQEKKDTASPQSDDAS" gene 1218763..1219383 /locus_tag="CMS_1165" /old_locus_tag="CMS1165" /db_xref="GeneID:6157051" CDS 1218763..1219383 /locus_tag="CMS_1165" /old_locus_tag="CMS1165" /codon_start=1 /transl_table=11 /product="putative DNA-invertase (site-specific recombinase)" /protein_id="YP_001709904.1" /db_xref="GI:170781572" /db_xref="GeneID:6157051" /translation="MTTLVGYVRVARSEESYQDQVDALDAAGCERIFVDVAGGPKAPR PGLQDALDYLRENDELLVVSLDRLGPGTADVVRILNSLEARGIAFRAVRDGLEAGTAA GRGFFAATLALATVEATTEAERHRRRSGDRPARATPDAGEETPVAPAFPSLPKGITRR KLQIAVEERSKGRDTAEIARVLDVSERVVTRALAWAESGRLGGMSR" misc_feature 1218772..1219182 /locus_tag="CMS_1165" /old_locus_tag="CMS1165" /inference="protein motif:HMMPfam:PF00239" /note="HMMPfam hit to PF00239, Resolvase, N-terminal,score 2.3e-19" misc_feature 1219279..1219344 /locus_tag="CMS_1165" /old_locus_tag="CMS1165" /note="Predicted helix-turn-helix motif with score 1244.000, SD 3.42 at aa 173-194, sequence RDTAEIARVLDVSERVVTRALA" gene 1219575..1220864 /locus_tag="CMS_1166" /old_locus_tag="CMS1166" /db_xref="GeneID:6157052" CDS 1219575..1220864 /locus_tag="CMS_1166" /old_locus_tag="CMS1166" /codon_start=1 /transl_table=11 /product="putative carboxypeptidase" /protein_id="YP_001709905.1" /db_xref="GI:170781573" /db_xref="GeneID:6157052" /translation="MLAAVVATALVGVGLVTGILPSPVGGASADPASCTVDALTAGWS TGTLHLSAAEVDGDAGAGVLDVRGDVPAATASTMKVLTAAAAVESLGPDRRVATRVLQ GPRADTVVLVGGGDPTLSRLPAGTDGVYPDAPHLDDLARQVLDARRADPDLADVPIRR LQADSSLFTGPVWLPEWPLEARRGGSMSNITALMVDGDRDDPAEPYSRRGDAAVARAA DAFAALLGDDVAADGPLVTAAAGSAVLGTVESAPVRDLVGYMLTHSDGTLAETLARLV SIEEGARSAAADIQRGTPAALAGLDLPADGVVLVDGSGLSYANRVPAALLTRLMVRVA EHRGDLAVAGRTGTLAEGGRFTGEADAAAGRIRGKTGTLERMHGLTGIADAEDGTEVA FTIWAEDVDPSVPAESARAEIDSLATDLHRCGGALGG" sig_peptide 1219575..1219661 /locus_tag="CMS_1166" /old_locus_tag="CMS1166" /note="Signal peptide predicted for CMS1166 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.856 between residues 29 and 30" misc_feature 1219794..1220768 /locus_tag="CMS_1166" /old_locus_tag="CMS1166" /inference="protein motif:HMMPfam:PF02113" /note="HMMPfam hit to PF02113, Peptidase S13, D-Ala-D-Ala carboxypeptidase C, score 3e-10" misc_feature 1220661..1220684 /locus_tag="CMS_1166" /old_locus_tag="CMS1166" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1220902..1221564) /locus_tag="CMS_1167" /old_locus_tag="CMS1167" /db_xref="GeneID:6157053" CDS complement(1220902..1221564) /locus_tag="CMS_1167" /old_locus_tag="CMS1167" /codon_start=1 /transl_table=11 /product="putative two-component response regulator" /protein_id="YP_001709906.1" /db_xref="GI:170781574" /db_xref="GeneID:6157053" /translation="MIRIVLVDDQELFRGGVRVALDAQPDLEVVGEAGDGQEGLGVID EVRPDVVLLDMRMPVMDGLETVRALFDGTRDAPPRVIVLTTFALDRASATAIRGGASG FLLKDATPAFLAAAIRAVHAGSAVLAPDELTQLFTSDATAAPAPPAPPAFRSLSVREK DVFGHVARGLSNAEVAALEFVSESTVKTHVSSILAKLALRDRVQLVVYAHDHRLVGRS GA" misc_feature complement(1220938..1221111) /locus_tag="CMS_1167" /old_locus_tag="CMS1167" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2.4e-17" misc_feature complement(1220992..1221057) /locus_tag="CMS_1167" /old_locus_tag="CMS1167" /note="Predicted helix-turn-helix motif with score 1238.000, SD 3.40 at aa 170-191, sequence LSNAEVAALEFVSESTVKTHVS" misc_feature complement(1221190..1221561) /locus_tag="CMS_1167" /old_locus_tag="CMS1167" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 4.6e-26" gene complement(1221561..1222727) /locus_tag="CMS_1168" /old_locus_tag="CMS1168" /db_xref="GeneID:6157054" CDS complement(1221561..1222727) /locus_tag="CMS_1168" /old_locus_tag="CMS1168" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001709907.1" /db_xref="GI:170781575" /db_xref="GeneID:6157054" /translation="MDAVVGIVLAGLALSPPVDVQMANPAVALLVLLAVVVRSVFPGA SLGLAWAMALAQWQLGERPGFADLALLLVLYSTARRGSRTTAVLGGASAVVGGAMATV YLLHTGARYSLLISPGGIGAVIFVLAPVLMLLLAWLTGLVVRVIRSRTTESRLRVQAE DTAVKAVDLAQAETLRASMARDVHDIVGHSLAVIIAQADSVQFLDDEERIRGVSATIA DTARRSLAEVREVLSGTSVTDADEGPEDLDAVVAQVRAAGVDLAHEVRGIRRQVDPAR QVVIRRVAQEMTTNAMRHGEPGGRIRLRETWRAADVVLEVENPVARRGTVPDRTGPLG IESLRVGTGVDGMRARLAAVGGDLEAEAVDDLFTARARIPLPAAHPLAVPGGRP" misc_feature complement(1221600..1221905) /locus_tag="CMS_1168" /old_locus_tag="CMS1168" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 5.5e-08" misc_feature complement(1222005..1222202) /locus_tag="CMS_1168" /old_locus_tag="CMS1168" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature complement(order(1222290..1222358,1222401..1222469, 1222602..1222670)) /locus_tag="CMS_1168" /old_locus_tag="CMS1168" /note="3 probable transmembrane helices predicted for CMS1168 by TMHMM2.0 at aa 20-42, 87-109 and 124-146" gene complement(1222879..1223088) /locus_tag="CMS_1169" /old_locus_tag="CMS1169" /db_xref="GeneID:6157055" CDS complement(1222879..1223088) /locus_tag="CMS_1169" /old_locus_tag="CMS1169" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709908.1" /db_xref="GI:170781576" /db_xref="GeneID:6157055" /translation="MAALKKGDHVTWNTPQGETHGKVVEEKTKDFQHDGQHFTASSDE PAYIVESDKSGKTAAHKGSALTKKK" gene complement(1223088..1223946) /locus_tag="CMS_1170" /old_locus_tag="CMS1170" /pseudo /db_xref="GeneID:6157056" misc_feature complement(1223101..1223859) /locus_tag="CMS_1170" /old_locus_tag="CMS1170" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 6.1e-67" /pseudo gene complement(1223996..1224556) /locus_tag="CMS_1171" /old_locus_tag="CMS1171" /db_xref="GeneID:6157057" CDS complement(1223996..1224556) /locus_tag="CMS_1171" /old_locus_tag="CMS1171" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709909.1" /db_xref="GI:170781577" /db_xref="GeneID:6157057" /translation="MTTTVERPTTASAKAGQPEGSKPTKRQNAERGFEASEQLHENMQ KVLVDLIELHIQGKQAHWNVVGKNFRDLHLQLDEIIESAREFSDDLAERMRALHATPD GRSDTVAENTTLPEYPQGEVDTAETVDLVTQRLEAAVHTMREVHDDVDEEDPTTADLL HGFITALEQYAWMVSAENRRVGSAAE" misc_feature complement(1224005..1224451) /locus_tag="CMS_1171" /old_locus_tag="CMS1171" /inference="protein motif:HMMPfam:PF00210" /note="HMMPfam hit to PF00210, Ferritin and Dps, score 6.2e-15" misc_feature complement(1224326..1224376) /locus_tag="CMS_1171" /old_locus_tag="CMS1171" /note="PS00818 Dps protein family signature 1." gene 1224801..1225703 /locus_tag="CMS_1172" /old_locus_tag="CMS1172" /db_xref="GeneID:6157058" CDS 1224801..1225703 /locus_tag="CMS_1172" /old_locus_tag="CMS1172" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709910.1" /db_xref="GI:170781578" /db_xref="GeneID:6157058" /translation="MTAITSDLRVLRDARAILVESLWWDPAGDVMWNDITAGTLHRSP WEGAVDGSDDTVLELPPPLASFQPADDGGFVAGLGDRIVLADRAGRITRELATVAHAH AGMRLNEGKVDPEGRFVIGSMDVTEGKPDAAVYSVDGAGSLRTLIGGFAITNGFEWTD GGSTMILTDTGQQTVYRAPYSADGELGDLEHWIHGEMSDGLTLDADGYAWNGVYGAGK VIRWAPDGTKDLEIEVPAPNVTSVAFAGPDLRTLVIGTARENLTEEQLEEHPLSGGVF AIDTAVSGRPVNVFRTAVADAARA" misc_feature 1224822..1225673 /locus_tag="CMS_1172" /old_locus_tag="CMS1172" /inference="protein motif:HMMPfam:PF03758" /note="HMMPfam hit to PF03758, Senescence marker protein-30 (SMP-30), score 9.7e-66" gene 1225788..1226324 /locus_tag="CMS_1173" /old_locus_tag="CMS1173" /db_xref="GeneID:6157059" CDS 1225788..1226324 /locus_tag="CMS_1173" /old_locus_tag="CMS1173" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="YP_001709911.1" /db_xref="GI:170781579" /db_xref="GeneID:6157059" /translation="MAFLLTDGFEQVELTEPWKAVQEAGGKPVLVSPKSDTVQGLNHI DKADTFDVDVQVKDADAADYDGLVLPGGVVNADDLRVDADSIAFAKAFFTAGKPVASI CHAPWILIEAGVVDGRRMTSYPTLATDLRNAGAEWVDEEVVVDSGFVTSRNPDDLPAF NAKLIEEIAEGEHDEQHA" misc_feature 1225866..1226294 /locus_tag="CMS_1173" /old_locus_tag="CMS1173" /inference="protein motif:HMMPfam:PF01965" /note="HMMPfam hit to PF01965, ThiJ/PfpI, score 5.7e-50" gene 1226345..1226875 /locus_tag="CMS_1174" /old_locus_tag="CMS1174" /db_xref="GeneID:6157060" CDS 1226345..1226875 /locus_tag="CMS_1174" /old_locus_tag="CMS1174" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709912.1" /db_xref="GI:170781580" /db_xref="GeneID:6157060" /translation="MTTPSPDARFRQTTPAPRPVRLAGLVIAVGGLVALVATGGTAVG VILAVLLVAAGAVVGALRIRITLDPGEVEVALVPLKRIRMPYSAVADCTVVDHLRPRT VGGIGVRSLPGGGAAILLDAGPAVAIEGADGTRHLVRSTFPREAATRIRDRAAAAPLA PPADDDDPEDPAATTA" sig_peptide 1226345..1226512 /locus_tag="CMS_1174" /old_locus_tag="CMS1174" /note="Signal peptide predicted for CMS1174 by SignalP 2.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.414 between residues 56 and 57" misc_feature order(1226402..1226455,1226468..1226527) /locus_tag="CMS_1174" /old_locus_tag="CMS1174" /note="2 probable transmembrane helices predicted for CMS1174 by TMHMM2.0 at aa 20-37 and 42-61" gene 1226885..1227487 /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /db_xref="GeneID:6157061" CDS 1226885..1227487 /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /codon_start=1 /transl_table=11 /product="putative signal peptidase" /protein_id="YP_001709913.1" /db_xref="GI:170781581" /db_xref="GeneID:6157061" /translation="MTTAPPAARRPRTSRPVVVALAVVVVVVGFVLDQLSKRWAVDAL GGGETIPLFPTARFALVYNPGVSFGMGAEVGPLLTVGIMALALGLAVWVGWQIRHRAS LLQVLLLSAVLAGALGNLFDRITRAEDGPLSGHVVDFIAVEWFAVFNVADILTVCGMI AWALTTVFGREPGPEERDDDADDAAVASPEGAGSAPTDRA" sig_peptide 1226885..1226998 /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /note="Signal peptide predicted for CMS1175 by SignalP 2.0 HMM (Signal peptide probability 0.922) with cleavage site probability 0.601 between residues 38 and 39" misc_feature order(1226921..1226980,1227104..1227172,1227191..1227259, 1227302..1227370) /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /note="4 probable transmembrane helices predicted for CMS1175 by TMHMM2.0 at aa 13-32, 74-96, 103-125 and 140-162" misc_feature 1226942..1227403 /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /inference="protein motif:HMMPfam:PF01252" /note="HMMPfam hit to PF01252, Peptidase A8, signal peptidase II, score 1.1e-18" misc_feature 1227224..1227256 /locus_tag="CMS_1175" /old_locus_tag="CMS1175" /note="PS00855 Signal peptidases II signature." gene 1227510..1228343 /locus_tag="CMS_1176" /old_locus_tag="CMS1176" /db_xref="GeneID:6157062" CDS 1227510..1228343 /locus_tag="CMS_1176" /old_locus_tag="CMS1176" /EC_number="1.1.1.274" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconic acid reductase" /protein_id="YP_001709914.1" /db_xref="GI:170781582" /db_xref="GeneID:6157062" /translation="MTTIPTLELSDGNRIPAIGLGTYGLDDDAGAELVSGAIGAGYRL LDTALNYGNEAAVGDGMRRSGVPREELFLTTKLPGRHHGYDETLASFEESRASLGVDY VDLYLIHWPNPSVDRYVDSWRAFVELKERGLVRSIGVLNFTPAHLTRIQEETGVLPVV NQVELHPTFAQADLRAFHAEHGIVTESWSPLGTREQLMQDPNVVAAADAHGVTPTQAV LRWHIQCGALPIPRSTDPERQRQNLDVFGFELTEEEVRAIGSGPQSRLWDGDPDTHEE M" misc_feature 1227534..1228298 /locus_tag="CMS_1176" /old_locus_tag="CMS1176" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 1.3e-107" misc_feature 1227630..1227683 /locus_tag="CMS_1176" /old_locus_tag="CMS1176" /note="PS00798 Aldo/keto reductase family signature 1." misc_feature 1228197..1228244 /locus_tag="CMS_1176" /old_locus_tag="CMS1176" /note="PS00063 Aldo/keto reductase family putative active site signature." gene complement(1228412..1229134) /locus_tag="CMS_1177" /old_locus_tag="CMS1177" /db_xref="GeneID:6157063" CDS complement(1228412..1229134) /locus_tag="CMS_1177" /old_locus_tag="CMS1177" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709915.1" /db_xref="GI:170781583" /db_xref="GeneID:6157063" /translation="MDPVEIVRDLVARATAVEAPLETGPALIAVALAAVLVLVPAAWR LTRHAVTIVHEGGHGLAATLSGRRLAGIRLHSDTSGLTVSVGGPGMVVTLLAGYPAPA LAGLGAAWLAGQGRSAAVLWLWLVLLALVVIQVRNWFGLWSCLVAGVVVGVIAGAAPI VVQGVAAHALALFLLLGALRATLELQRSRSRRGGGASDADQLGRLTHLPGILWVGVLV LIAAACLVAGVVLLGIPALLGR" misc_feature complement(order(1228433..1228501,1228598..1228666, 1228709..1228777,1228796..1228864,1229006..1229074)) /locus_tag="CMS_1177" /old_locus_tag="CMS1177" /note="5 probable transmembrane helices predicted for CMS1177 by TMHMM2.0 at aa 21-43, 91-113, 120-142, 157-179 and 212-234" gene 1229199..1229774 /gene="apt" /locus_tag="CMS_1178" /old_locus_tag="CMS1178" /db_xref="GeneID:6157064" CDS 1229199..1229774 /gene="apt" /locus_tag="CMS_1178" /old_locus_tag="CMS1178" /EC_number="2.4.2.7" /note="catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="YP_001709916.1" /db_xref="GI:170781584" /db_xref="GeneID:6157064" /translation="MRLTDRRRPATDYRCRVPETSASDLVRSLLLTVPDFPQPGILFR DLTPVLADGAGLRAVVDNLVAAGGPVDAVAGVEARGFLLAAAAAYASGVGTLAVRKAG KLPGEVLRETYALEYGEAAIELHPGQLAPGSRVLLLDDVLATGGTLEAAARLLERAGY EVAGIGVVLELADLGGRARLAGHDVHAILSL" misc_feature 1229331..1229735 /gene="apt" /locus_tag="CMS_1178" /old_locus_tag="CMS1178" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 1.2e-37" misc_feature 1229601..1229639 /gene="apt" /locus_tag="CMS_1178" /old_locus_tag="CMS1178" /note="PS00103 Purine/pyrimidine phosphoribosyl transferases signature." gene complement(1229842..1231107) /locus_tag="CMS_1179" /old_locus_tag="CMS1179" /db_xref="GeneID:6158597" CDS complement(1229842..1231107) /locus_tag="CMS_1179" /old_locus_tag="CMS1179" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709917.1" /db_xref="GI:170781585" /db_xref="GeneID:6158597" /translation="MLDSTDRIQTSHAGSLPRTDALIAANAARADSRKAVLVGGQASF PSAPAPAPADDGLDAVLADAVDGLVARQREVGITVPGDGEYGKAMSSAIDYGAWWSYS FQRLSGLELVPGGPFSSEPVRSSPGDVRLTTFPDRRDWTIFADAYRDPSSGITVGDAP IEFPSATGPVSYTGHDAIQADIAHLKQALDANGYEEGFITSLSPGSASRIGNLHYATE EEFIWACADAMREEYVAIIDAGFVLQIDDPSIAENWDQINPEPSVEDYLAFTRIRVEA LNHALRGLPPERIRFHLCWGSWHGPHTTDIEFRHLVRTMLEIDAGAYSFEGANARHEH EWRVWEDVELPDGKLIVPGVVGHATNVVEHPELVADRIERYARLVGRERVIASTDCGL GGRIHPQIAWAKLESLAQGAEIATRRLWS" gene 1231351..1231812 /locus_tag="CMS_1180" /old_locus_tag="CMS1180" /db_xref="GeneID:6157065" CDS 1231351..1231812 /locus_tag="CMS_1180" /old_locus_tag="CMS1180" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709918.1" /db_xref="GI:170781586" /db_xref="GeneID:6157065" /translation="MLLRHPVLGTATALYLGLVAWITLSPEPYDRRLDGYLFRALRAL HRHDGTSWITYSSVEGAANVAMFLPVGMFLVLLLGRSRWWLAIALGVGLSALIETAQA FLPTRVSDVRDLVHNGLGALLGVVLVLILTARSENARRRALRRRPQPASTV" misc_feature order(1231369..1231422,1231513..1231581,1231594..1231662, 1231690..1231749) /locus_tag="CMS_1180" /old_locus_tag="CMS1180" /note="4 probable transmembrane helices predicted for CMS1180 by TMHMM2.0 at aa 7-24, 55-77, 82-104 and 114-133" misc_feature 1231381..1231773 /locus_tag="CMS_1180" /old_locus_tag="CMS1180" /inference="protein motif:HMMPfam:PF04892" /note="HMMPfam hit to PF04892, VanZ like protein, score 3.3e-11" gene 1231936..1234218 /locus_tag="CMS_1181" /old_locus_tag="CMS1181" /db_xref="GeneID:6157066" CDS 1231936..1234218 /locus_tag="CMS_1181" /old_locus_tag="CMS1181" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709919.1" /db_xref="GI:170781587" /db_xref="GeneID:6157066" /translation="MQVTGTELERERAYVTRLYGRLDAVRADTRDQLIAVRDSPTGGT HQNRSERDAFARIYEDRLQALREVDERLVFGRLEFEDGHLPEDEPRDAAPARTAGDGD PVYRYIGRIGLRDDDLQPLLLDWRVPQASAFYQATAATPLGARARRHLTTRGREVVHV EDEVFDPTLLDEGRTSLQGEGALLAALAAGRTGRMNDIVATIQAEQDRIIRSDLRGVL VVQGGPGTGKTAVALHRAAYLLYSHRDRLASSGVLVVGPSRSFLQYIEAVLPSLGETG VVLASVGQLYPGIDAAGEDAPEVAAVKGSAEMAGLLQRAVRSRQVVPTEAVTLDVNGE RIVLEPSLVANALRRAQDSRKPHNEARLVFNKAALGSLAQVLASQMRRNGSALDDSDL AMLREDLRTSYDVKVALNTAWLPLTPEKLIQDLYARPNWLASLTPRWSPEKRALLRRD RDAPFTIADVPLLDEAAELLGEFSAQADASAREREQQRLRDIENAEQAIENMGVGGMV TAERLAEGFAEQAARRTTAERAASDRTWTYGHIVVDEAQELSPMQWRVLLRRCPLRSF TIVGDVAQASSAVGVTNWQDALGPVLGREWRLEELTVNYRTPARIAEAAERMAIAHGL PVTRSRAVREGEHPIDTVEVDADEVVSAVIDVVDEEREGDEAGTLAVIARDDRVEELH RALAERFGSAVGIGVGGLGRPIAVLGSQEAKGLEFDVVVIAEPDEILAHTSRGAAGLY VAMTRPTQRLHVVTSTGFTA" misc_feature 1232599..1232622 /locus_tag="CMS_1181" /old_locus_tag="CMS1181" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1234405..1235916 /locus_tag="CMS_1182" /old_locus_tag="CMS1182" /db_xref="GeneID:6157067" CDS 1234405..1235916 /locus_tag="CMS_1182" /old_locus_tag="CMS1182" /codon_start=1 /transl_table=11 /product="putative symporter" /protein_id="YP_001709920.1" /db_xref="GI:170781588" /db_xref="GeneID:6157067" /translation="MPDGVASVAEDDAPEAPDAPAASAAARRAHRSRAIQVVVIVAVA VAVAVGIALVPPPAGVDPRGMHMAGIFVGTVLALILQPLPTAPVALVGLAVAMLTGTM TTDGEALVGFANPTIWLIVASFFIADGFLVTGLGRRIALVFVSRLGGSSLGLAYGMAL TDLVLAPATPSNTARAGGVVYPIVASLSRVQGSTPESDASRRRLGSYLALTSVQVNTV TSAMFVTAMAGNPVAQKAAADLGIEVTWGGWALAALVPGLLSLVVVPWAMSRVYPPTL TRTPEAPAHAREELRGLGPLSGHERIMAATFVLLLVLWCGGSLLGIPATAAAFGGIAV LLVTGVLTWSHLAANASAWSTLIFFAVLVGMADQLDALGVIDLVGGAVSGSVGGLPWP WAFAVLALVYFFSHYLFASNTAHIVAMYAVFLGAAVATGTPPLFAALVLGFIGNLFGG ISHYASGPSGVVFGSGYVTTKEWFRVGFVMAVVLIVIWGVVGTAWMGVLGLLA" misc_feature 1234507..1235910 /locus_tag="CMS_1182" /old_locus_tag="CMS1182" /inference="protein motif:HMMPfam:PF00939" /note="HMMPfam hit to PF00939, Sodium/sulphate symporter,score 2.7e-173" misc_feature order(1234513..1234581,1234624..1234692,1234729..1234797, 1234840..1234908,1235014..1235082,1235140..1235208, 1235332..1235400,1235428..1235496,1235515..1235583, 1235626..1235694,1235707..1235775,1235833..1235901) /locus_tag="CMS_1182" /old_locus_tag="CMS1182" /note="12 probable transmembrane helices predicted for CMS1182 by TMHMM2.0 at aa 37-59, 74-96, 109-131, 146-168,204-226, 246-268, 310-332, 342-364, 371-393, 408-430,435-457 and 477-499" gene complement(1236202..1236960) /locus_tag="CMS_1183" /old_locus_tag="CMS1183" /db_xref="GeneID:6157068" CDS complement(1236202..1236960) /locus_tag="CMS_1183" /old_locus_tag="CMS1183" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709921.1" /db_xref="GI:170781589" /db_xref="GeneID:6157068" /translation="MTRRRRRTPVLVTLAALVIVIVAGLVQWRGDPGTGSGQAGGSTS GLGAEPGSTGSARLALQGLEVRTDERVPGYDRESFAWRTDVDRNGCDTRNDVLRRDLA DAEIRSGTRGCVVQAGVLEDPYSGARVSFDRSRDPEAVQIDHVVSLSDAWSSGAWRWD ADYRAAFANDPLELVAASAAENNAKSDATADAWLPEDPADACALVARQVAIKVRTELS VTRAEHDAMAHVLDGCGDAPLLTSDDVGWPAPVR" sig_peptide complement(1236202..1236345) /locus_tag="CMS_1183" /old_locus_tag="CMS1183" /note="Signal peptide predicted for CMS1183 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.408 between residues 48 and 49" misc_feature complement(1236877..1236936) /locus_tag="CMS_1183" /old_locus_tag="CMS1183" /note="1 probable transmembrane helix predicted for CMS1183 by TMHMM2.0 at aa 9-28" gene complement(1236957..1238345) /locus_tag="CMS_1184" /old_locus_tag="CMS1184" /db_xref="GeneID:6157069" CDS complement(1236957..1238345) /locus_tag="CMS_1184" /old_locus_tag="CMS1184" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001709922.1" /db_xref="GI:170781590" /db_xref="GeneID:6157069" /translation="METHSRETTQRHVSTPPETSPIPIPDERQVRGSHFVDLSPLTES PAFARLWAGNAIAGIGSQMTVVAIGLHVYELTGSTGSVALVGVLSLLPMIIAGLYGGM LADAFDRRKVALIASCVAWGSTIVLAALAWTHAETVWSLYALSILNAVAATVIGTSRQ AILPRILPPHLLPAASALGGISLGVMVTVGPALAGVLVASVGFQWTYTVDAVLFLAAF TGVLALPRIAPEGEVQRPGLASIRYGLGFLKTAPNIRMSFIVDIIAMTLGQPRVLFPA VGAVVLGGGPVTVGILTAAGAVGSLVSSVLSGSVGRVTRHGRAIRLAIVAYGLSTAGF GVVLLLASKPGVLHGIGSRIEDASIPGIVAASVLLALTGAADNISSIFRNTMLQTAVP DNMRGRLQGIFIVVVTGGPRLGDAYIGIVTLFAALWVPSLVGGLLIAVVVWTLIRALP SFEHYDSRNPTP" misc_feature complement(1236963..1238234) /locus_tag="CMS_1184" /old_locus_tag="CMS1184" /inference="protein motif:HMMPfam:PF05977" /note="HMMPfam hit to PF05977, Bacterial protein of unknown function DUF894, score 4.1e-06" misc_feature complement(order(1236999..1237067,1237077..1237145, 1237203..1237271,1237323..1237391,1237428..1237496, 1237659..1237727,1237746..1237814,1237857..1237925, 1237944..1238012,1238040..1238108,1238127..1238195)) /locus_tag="CMS_1184" /old_locus_tag="CMS1184" /note="11 probable transmembrane helices predicted for CMS1184 by TMHMM2.0 at aa 51-73, 80-102, 112-134, 141-163,178-200, 207-229, 284-306, 319-341, 359-381, 401-423 and 427-449" misc_feature complement(1237077..1238198) /locus_tag="CMS_1184" /old_locus_tag="CMS1184" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1238513..1238782 /gene="rpsO" /locus_tag="CMS_1185" /old_locus_tag="CMS1185" /db_xref="GeneID:6157070" CDS 1238513..1238782 /gene="rpsO" /locus_tag="CMS_1185" /old_locus_tag="CMS1185" /note="primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S15" /protein_id="YP_001709923.1" /db_xref="GI:170781591" /db_xref="GeneID:6157070" /translation="MALEADVKKAIIDEYATHPGDTGSPEVQIALLTKRITGLTEHLK EHKHDHHTRRGLLLLVGQRRRLLGYLSNVDIERYRALIARLGIRR" misc_feature 1238528..1238776 /gene="rpsO" /locus_tag="CMS_1185" /old_locus_tag="CMS1185" /inference="protein motif:HMMPfam:PF00312" /note="HMMPfam hit to PF00312, Ribosomal protein S15,score 1e-34" gene 1239259..1241532 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /db_xref="GeneID:6157071" CDS 1239259..1241532 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /codon_start=1 /transl_table=11 /product="polynucleotide phosphorylase/polyadenylase" /protein_id="YP_001709924.1" /db_xref="GI:170781592" /db_xref="GeneID:6157071" /translation="MEGPEIKFAEAVLDNGKYGTRTVRFEAGRLAQQAQGAVAAYLDE DTMLLSATSVGKHPKDNFDFFPLTIDVEERSYAAGKIPGSFFRREGRPSTEAILVCRL IDRPLRPSFITGLRNEVQVVITVLSIAPDEFYDSLAINAASASSMLSGIPFSGPIAGV RLALIGDQWVVFPKHSQLKEAVFDITVAGRVVTDAQGNEDVAIMMVEAEATEGAWDLI QAGATKPDEAVVAQGLEAAKPFIRQLVAAQASLAQQAAKPTVDYPVFLPYAQQSYDAV SALALEELGTVYRIADKIERQDADDALKTRTKEAVAAKVEAGELPQSALTEFSAAYKS VTKTVVRGRILRDGIRMDGRGLADIRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLN MLKMEQQIDSLSPVTKKRFMTHYNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVL PSREDFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDTV DGQVRYAALTDILGAEDALGDMDFKVAGTSEFVTAIQLDTKLDGIPTSVLDGALKQAK EARTAILGVLNQAIDAPDEMAPTAPRVISVNIPVDKIGELIGPKGKTINAIQDETGAD ISIEEDGAVYIGAVDGPSAEAARAQVNAIANPTNPEVGESFLGTVVKIATFGAFVSLL PGKDGLLHISEVRKLAGGKRVENVEDVLGVGQKILVEITKIDDRGKLSLAPVMEEAAD QEGSAAASDGPEAPAEG" misc_feature 1239313..1239714 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF01138" /note="HMMPfam hit to PF01138, 3' exoribonuclease, score 1.1e-31" misc_feature 1240075..1240323 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF03726" /note="HMMPfam hit to PF03726, 3' exoribonuclease, score 5.3e-16" misc_feature 1240330..1240731 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF01138" /note="HMMPfam hit to PF01138, 3' exoribonuclease, score 1.7e-44" misc_feature 1240738..1240962 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF03725" /note="HMMPfam hit to PF03725, 3' exoribonuclease, score 5.9e-19" misc_feature 1241035..1241208 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF00013" /note="HMMPfam hit to PF00013, KH, type 1, score 2.7e-14" misc_feature 1241230..1241454 /locus_tag="CMS_1186" /old_locus_tag="CMS1186" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 2.5e-12" gene complement(1241602..1241982) /locus_tag="CMS_1187" /old_locus_tag="CMS1187" /db_xref="GeneID:6157072" CDS complement(1241602..1241982) /locus_tag="CMS_1187" /old_locus_tag="CMS1187" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709925.1" /db_xref="GI:170781593" /db_xref="GeneID:6157072" /translation="MTEAGGRPADEGEGDAARARPRRLALVLAIVAAVLVIAGVVTAI TVSQGGDEPVTPVPTTGEPGTTPGITPTPTRKPTPTSPDPTPTDEPAPTPAPSPSADP TPAPSLSAPPAQDVPYPTDPNDGK" misc_feature complement(1241845..1241913) /locus_tag="CMS_1187" /old_locus_tag="CMS1187" /note="1 probable transmembrane helix predicted for CMS1187 by TMHMM2.0 at aa 24-46" gene complement(1242005..1242535) /locus_tag="CMS_1188" /old_locus_tag="CMS1188" /db_xref="GeneID:6157073" CDS complement(1242005..1242535) /locus_tag="CMS_1188" /old_locus_tag="CMS1188" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709926.1" /db_xref="GI:170781594" /db_xref="GeneID:6157073" /translation="MPNDPLHRLPDAAPFHLTSPDFADGAALPQSARGAGQGGEDRSP ALNWTGAPTATRSYVLTMYDPDAPTGSGFWHWAVRGIPATTTSLPGGAGDPDAGLLPD GAVTLHNDARETRFFGATPPAGHGTHRYFFTVTALDVESLDIPEGATPAMLGFLMLPH VIGRAQLMGTTINVAD" misc_feature complement(1242014..1242478) /locus_tag="CMS_1188" /old_locus_tag="CMS1188" /inference="protein motif:HMMPfam:PF01161" /note="HMMPfam hit to PF01161, PEBP, score 4e-08" gene 1242946..1244085 /locus_tag="CMS_1189" /old_locus_tag="CMS1189" /db_xref="GeneID:6157074" CDS 1242946..1244085 /locus_tag="CMS_1189" /old_locus_tag="CMS1189" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001709927.1" /db_xref="GI:170781595" /db_xref="GeneID:6157074" /translation="MTTSSPSASDVVPGSPPRRRRGGPLVPRRSRPTDTTTPSGTIVE TTVQAAGAIVLEASAAEPGLRTGGSIPQPARRCAIGDTDLRVFPLALGGNVFGWTAGS EDTSAILDRYQEAGGNFIDTADSYASGRSEHMIGSWMRERRNRDSMVVATKIGKSEDF PGLGGSRIERAVDASLSRLGTDHIDLLYFHWDDIDVPLEESLAAAGRLIASGKVRHLA ASNYAAERLLHARIMGGLYDAPRFVALQTHYNLVNRAPYESAYLDVVRGQQLAVMPYF ALANGFLTGKYRTRDAVRDGARGARAAAYLTRRGLRVLTALDEIADHHSTSVATIALA WLLAKPGVVAPVASASRPEQVHDLVQAAHVQLSRHDVARLDRASE" misc_feature 1243183..1244082 /locus_tag="CMS_1189" /old_locus_tag="CMS1189" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 4.7e-39" gene 1244361..1244801 /locus_tag="CMS_1190" /old_locus_tag="CMS1190" /db_xref="GeneID:6157075" CDS 1244361..1244801 /locus_tag="CMS_1190" /old_locus_tag="CMS1190" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709928.1" /db_xref="GI:170781596" /db_xref="GeneID:6157075" /translation="MPAPAPSLTQDQQDDAAFHDVFMRYVDLDANTLTDQDLAALLTG SVLKSEQAGLHKAREQGQRTDGQELVSEFEVTDRGIDPQGAQYMTAQVCLDIGGTRII DSNGADVTPDRAVRQSLQVKAIKSGDALWRISDIVRNEDVHACG" gene 1244798..1245712 /locus_tag="CMS_1191" /old_locus_tag="CMS1191" /db_xref="GeneID:6157076" CDS 1244798..1245712 /locus_tag="CMS_1191" /old_locus_tag="CMS1191" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001709929.1" /db_xref="GI:170781597" /db_xref="GeneID:6157076" /translation="MSLLAPVVALVLALSSALVAQAESADDPCSVKFGGEGICTTGGI QGGGVGLQAENTRAGVAFSSRAGGHSPTDPLQPTPSTSHPAAPPPVPRGRMAADVDVP CSPSARLSGGGLCSDGQHAFLPPAKAPTKPADPAPVVAATPGVSLADVAQFVPRDASI RSQPNGWAIVGAPVNLFTDATTQVVGGTLLGRPAQVRFVPVSFTWDHGDGTSSTVEGP GSSWKALGQQDSTATDTSHVYPSVGVRQVTLTIAYSPSYRFDGGGWQQIPGTLPVQVG PVTIRVLQGSTVLVGGACGTRDAGPGCP" sig_peptide 1244798..1244872 /locus_tag="CMS_1191" /old_locus_tag="CMS1191" /note="Signal peptide predicted for CMS1191 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.688 between residues 25 and 26" gene 1245767..1247131 /locus_tag="CMS_1192" /old_locus_tag="CMS1192" /db_xref="GeneID:6157077" CDS 1245767..1247131 /locus_tag="CMS_1192" /old_locus_tag="CMS1192" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="YP_001709930.1" /db_xref="GI:170781598" /db_xref="GeneID:6157077" /translation="MTLMSRAVELPLDLPELTVQSTGGARVRRSVLPSGVRILSEDVP GSRSATIGMWVAVGSRDEQPGDLGSTHFLEHLLFKGTPSRTALDIAVSFDAVGGEHNA VTAKEYTCYYAKVQDRDLSMAVDVLADMVTSSLIDAEEFETERGVILEELAMADDDPG DIVSERFFEAVLGDHPLGRPIGGSPADIEAAERDAVVAHYRRNYRPQDLVITAAGAVD HDALVARVTAGLERAGWDLSIAAVPVARRTGAAPMITRRSDLVVVDRPIEQTNILLGV PGLAASDDRRPALAMLNSVLGGGMSSRLFQEVREKRGLAYSVYSFSASYSDAGVFGLY AGCTAAKTAQVSRLMVDEFQKLAEQHVTEEELSRAFGQLSGQSALALEDSDTRMSRLG RSEITTGEYVDLDETLVRLSRVTAEDVRALASDLISRPLSIAAVGTVGADAFAPLLDT PALL" misc_feature 1245875..1246324 /locus_tag="CMS_1192" /old_locus_tag="CMS1192" /inference="protein motif:HMMPfam:PF00675" /note="HMMPfam hit to PF00675, Insulinase-like, score 2.9e-40" misc_feature 1245938..1246009 /locus_tag="CMS_1192" /old_locus_tag="CMS1192" /note="PS00143 Insulinase family, zinc-binding region signature." misc_feature 1246334..1246885 /locus_tag="CMS_1192" /old_locus_tag="CMS1192" /inference="protein motif:HMMPfam:PF05193" /note="HMMPfam hit to PF05193, Peptidase M16, C-terminal,score 3.6e-40" gene 1247140..1247742 /locus_tag="CMS_1193" /old_locus_tag="CMS1193" /db_xref="GeneID:6157078" CDS 1247140..1247742 /locus_tag="CMS_1193" /old_locus_tag="CMS1193" /codon_start=1 /transl_table=11 /product="putative phosphoglycerate mutase" /protein_id="YP_001709931.1" /db_xref="GI:170781599" /db_xref="GeneID:6157078" /translation="MSHYIYLVRHGEQQDAEHGLPDGPLSGRGKRQAHCIADRLSGVP FTSVRHSPLARAEETAAIMAEHMPAIEPEPSSLLFDCIPSGPVPDMPHAFMSFFGGVT EEEIDAGSAQMADAVSEFLAPAREDRHDLLITHNFVIAWFVRHVFDAPEWRWMGINQA NCGLTIIRVRSAKPPVLVVHNDLGHLPVELRTGLPEQQPY" misc_feature 1247146..1247664 /locus_tag="CMS_1193" /old_locus_tag="CMS1193" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 2.1e-05" gene 1247801..1248634 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /db_xref="GeneID:6157079" CDS 1247801..1248634 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /note="catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="YP_001709932.1" /db_xref="GI:170781600" /db_xref="GeneID:6157079" /translation="MTTTVAVVGATGRMGQLISQIVEASDEFELVASLDSKGELSDML GADIAVDVTLPAVSQGVVEYAVAHGMNVLVGTSGWTGERITELERRITGNLAVGVVII PNFSVGSVLATSFAQMAARFYDSIEIVEAHGASKIDSPSGTAVRTAELMSQARGSRGP VQAPHTDQRARGQQVASIPVHSLRMQGVVAKQDVVFGGNGEVLTISHDTLAPSAYEAG ILLALRATRTARGVVVGLDRLIDMDGSRERATQTAPTGAASGPVDDGGPSGQAATVTS A" misc_feature 1247807..1248115 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /inference="protein motif:HMMPfam:PF01113" /note="HMMPfam hit to PF01113, Dihydrodipicolinate reductase, score 1.4e-22" misc_feature 1248077..1248145 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /note="1 probable transmembrane helix predicted for CMS1194 by TMHMM2.0 at aa 93-115" misc_feature 1248122..1248523 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /inference="protein motif:HMMPfam:PF05173" /note="HMMPfam hit to PF05173, Dihydrodipicolinate reductase, score 7.5e-43" misc_feature 1248179..1248232 /locus_tag="CMS_1194" /old_locus_tag="CMS1194" /note="PS01298 Dihydrodipicolinate reductase signature." gene 1248634..1249083 /locus_tag="CMS_1195" /old_locus_tag="CMS1195" /db_xref="GeneID:6157080" CDS 1248634..1249083 /locus_tag="CMS_1195" /old_locus_tag="CMS1195" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709933.1" /db_xref="GI:170781601" /db_xref="GeneID:6157080" /translation="MGTRIGVAVMAVLMVLYLTLAGQIAVLLLISGEPVGVVFGLALL ILPLVGVWALVRELSFGVRSARLARILDGEGGLPVADLPTRASGRPIRDAADEAFPAY QAEVEQDPASWRAWFRLGLAYDASGDRRRARGAIRRAIALHRAEPAA" sig_peptide 1248634..1248729 /locus_tag="CMS_1195" /old_locus_tag="CMS1195" /note="Signal peptide predicted for CMS1195 by SignalP 2.0 HMM (Signal peptide probability 0.911) with cleavage site probability 0.383 between residues 32 and 33" misc_feature order(1248652..1248720,1248733..1248801) /locus_tag="CMS_1195" /old_locus_tag="CMS1195" /note="2 probable transmembrane helices predicted for CMS1195 by TMHMM2.0 at aa 7-29 and 34-56" misc_feature 1248970..1249071 /locus_tag="CMS_1195" /old_locus_tag="CMS1195" /inference="protein motif:HMMPfam:PF07719" /note="HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.00041" gene complement(1249133..1250053) /locus_tag="CMS_1196" /old_locus_tag="CMS1196" /db_xref="GeneID:6157081" CDS complement(1249133..1250053) /locus_tag="CMS_1196" /old_locus_tag="CMS1196" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709934.1" /db_xref="GI:170781602" /db_xref="GeneID:6157081" /translation="MSDSTASPAPLTVLISGAGGTIGTELQAQLHAAGHRVQTLVRHA PSSPDEHEWQPADGRLDPAVLDDVDAVVNLSGASISRLPWTKAYQEEIRASRVSATRT IVDAIASSSNPPRVLLNGSAVGFYGDRPAERLTEDSPRGAGFLAEVVEAWEAEAFHAP ADVRAATLRTGLVLAQAGALAPLRLLTNIGLAGRLGTGGQVWPWISLRDEAAAIVHLL TSSVSGPVNLTGPEPVMADRLMRYLAKRMHRPYLVPAPEFLIRLALQEAGQELLLSSQ PARPEKLLADRFAFRDPTVELAIDRLLAKS" gene 1250150..1250941 /gene="thyX" /locus_tag="CMS_1197" /old_locus_tag="CMS1197" /db_xref="GeneID:6157082" CDS 1250150..1250941 /gene="thyX" /locus_tag="CMS_1197" /old_locus_tag="CMS1197" /note="flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor" /codon_start=1 /transl_table=11 /product="FAD-dependent thymidylate synthase" /protein_id="YP_001709935.1" /db_xref="GI:170781603" /db_xref="GeneID:6157082" /translation="MTVVPHDDIAFRSDMTVELVRSSAHDSDVIFAARVSTAGEKTLE RALDEPDGLDRALEGDVDTEAEEKRVKRDRGLINYLMRDRHGSPFEHNSMTFYVQAPI FVFREFMRHRMASYNEESGRYKELDAVFYVPGPERNLVQVGKPGAYEFHAGTPEQTAL VQEETRRTSAEAYASYQRMLEQGVAREVARIVLPLNIYSSMYVTLNARALMNFLSLRT KHEDSTFPSFPQREIEMCAEKMETEFERLMPLTHAAFQKNGRVAP" misc_feature 1250159..1250887 /gene="thyX" /locus_tag="CMS_1197" /old_locus_tag="CMS1197" /inference="protein motif:HMMPfam:PF02511" /note="HMMPfam hit to PF02511, Thymidylate synthase complementing protein, score 2e-68" gene 1250976..1251959 /locus_tag="CMS_1198" /old_locus_tag="CMS1198" /db_xref="GeneID:6157083" CDS 1250976..1251959 /locus_tag="CMS_1198" /old_locus_tag="CMS1198" /EC_number="4.2.1.52" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthase" /protein_id="YP_001709936.1" /db_xref="GI:170781604" /db_xref="GeneID:6157083" /translation="MVPVSTENPFGQVLVALVTPFTADGEVDWAGVEKHMDDVIVAGA DGIVVTGTTGETSTLTDPEKIKLVEVGRSVSAGRAKIITGGGSNETAHAMQLARQSEK AGADGNMIVTPYYNKPTQAGVLTHFRMIADATDLPVILYDIPGRTGIPIQYETILRAA KHPNILAVKDAKGDLAQASRVLNQTGLMYFAGDDANALPTLAIGGTGLIGVTANITAT PYRTMVDAVNAGDLAAATHAHQQLEPLVRAVMTHVPGTVAAKYILHGLGRIGSPRVRL PLVGPEEWEAAQIEDEIDPLRDVPGVDFRNFRPDRNAAAGGALPQVAGTTR" misc_feature 1251000..1251866 /locus_tag="CMS_1198" /old_locus_tag="CMS1198" /inference="protein motif:HMMPfam:PF00701" /note="HMMPfam hit to PF00701, Dihydrodipicolinate synthetase, score 3.5e-79" misc_feature 1251396..1251488 /locus_tag="CMS_1198" /old_locus_tag="CMS1198" /note="PS00666 Dihydrodipicolinate synthetase signature 2." gene 1252019..1253701 /locus_tag="CMS_1199" /old_locus_tag="CMS1199" /db_xref="GeneID:6157084" CDS 1252019..1253701 /locus_tag="CMS_1199" /old_locus_tag="CMS1199" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709937.1" /db_xref="GI:170781605" /db_xref="GeneID:6157084" /translation="MPQAVYDPPELKPGILRITPIGGLGEIGRNMTTFEIDGKILVVD CGVLFPEEHQPGVDLILPDFSSIADRLDDVVGIVLTHGHEDHIGAVPYLLKLKQDIPL IGSGLTLALIEAKLKEHRITPYTFQVKEGDRERLGPFELEFVAVNHSIPDALAVAITT EAGSVLHTGDFKMDQLPLDDRITDLRAFARLGEAGIDLFMSDSTNADVPGFTPTERSI GPVLEAVISKAPRRVIVASFSSHVHRVQQVLDAAHANGRRVAFIGRSMIRNMTIAAEL GYLKVPEGVLIDSKKAVNLPDDQIVYMSTGSQGEPMAVLSRMANLEHQIEIGQDDTVI LASSLIPGNENAVYRVINGLTKLGANVVHKANAKVHVSGHAAAGELLYCYNILKPRNV LPVHGEYRHLVANQQLAIQTGVPERNTFLAEHGTVLDMKDGHVRVTGQLDVGYVYVYV DGSTVGEITDADLKDRRILSEEGFVTIFVVVEPQTGKAIIGPEIEARGFAEDSKVFDS VKPLVVKALAEAAANGTRDTHAYSQVVRRTVGRWVNSSHRRRPMIIPVVIEA" misc_feature 1252100..1252732 /locus_tag="CMS_1199" /old_locus_tag="CMS1199" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 1.2e-22" misc_feature 1253099..1253218 /locus_tag="CMS_1199" /old_locus_tag="CMS1199" /inference="protein motif:HMMPfam:PF07521" /note="HMMPfam hit to PF07521, RNA-metabolising metallo-beta-lactamase, score 1.6e-13" gene 1253905..1254941 /locus_tag="CMS_1200" /old_locus_tag="CMS1200" /pseudo /db_xref="GeneID:6157085" gene 1254938..1255645 /locus_tag="CMS_1201" /old_locus_tag="CMS1201" /db_xref="GeneID:6157086" CDS 1254938..1255645 /locus_tag="CMS_1201" /old_locus_tag="CMS1201" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001709938.1" /db_xref="GI:170781606" /db_xref="GeneID:6157086" /translation="MSLIRLEQVTRTVERPDDEPLTILHGVDLDVSVGDHVSIVGRSG SGKSTLLNILGLLDTPTTGEVFLDDVPMARVSGSRRDRARGGDIGFIFQQFNLLQGRT ARENVMTPLLYSTGRTFWRRASIAADMLERVGLGHRIDSMPETMSGGEQQRVAIARAL VRSPRLILADEPTGALDIETGATVMTLLAEVAHASGAALVTITHDPTVAARADRHHRL EAGVLAPAEALTRGVLA" misc_feature 1255037..1255600 /locus_tag="CMS_1201" /old_locus_tag="CMS1201" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.1e-53" misc_feature 1255058..1255081 /locus_tag="CMS_1201" /old_locus_tag="CMS1201" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1255373..1255417 /locus_tag="CMS_1201" /old_locus_tag="CMS1201" /note="PS00211 ABC transporters family signature." gene 1255642..1256874 /locus_tag="CMS_1202" /old_locus_tag="CMS1202" /db_xref="GeneID:6157087" CDS 1255642..1256874 /locus_tag="CMS_1202" /old_locus_tag="CMS1202" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709939.1" /db_xref="GI:170781607" /db_xref="GeneID:6157087" /translation="MSGWLSRTATGLVGAVVEAWAELRIHRTRVMLSLIGVAVAVAAI TSVVGLGAVVQQSQTEQMERQSGRPAALSVSAYSATGSGLSYAEQRTLLADVADRYGI TWSTIIGSTTVPVDFARGRVQVQTVVVDRDYGQMRRVDVTDGRWFVERDGERLAPALV VNPAFLAELGSPEIAAHPSAVLHGERSDLVGVVVGTVPALYAEEPPTVYLQASDAERL MSDDALDAMAPQSEFWVPEAEADALTAAITSQVAATAPEGWEVSVGRSDWGTYDYDPL LAVKILVGGVAGLVLLLGALGLVNISLVTVKQRIREIGVRRSFGASAGRVFFAVMMES VVATVAAGVVGVMAAVAIVKNPWILSFVASGVTEFPPFPLSAALLGLGASLVVGAIAG LLPALVAVRVSVIDAIRY" misc_feature order(1255735..1255803,1256488..1256556,1256617..1256685, 1256773..1256841) /locus_tag="CMS_1202" /old_locus_tag="CMS1202" /note="4 probable transmembrane helices predicted for CMS1202 by TMHMM2.0 at aa 32-54, 283-305, 326-348 and 378-400" misc_feature 1256254..1256853 /locus_tag="CMS_1202" /old_locus_tag="CMS1202" /inference="protein motif:HMMPfam:PF02687" /note="HMMPfam hit to PF02687, Protein of unknown function DUF214, score 3.4e-25" gene 1256874..1259789 /gene="ftsK" /locus_tag="CMS_1203" /old_locus_tag="CMS1203" /db_xref="GeneID:6157088" CDS 1256874..1259789 /gene="ftsK" /locus_tag="CMS_1203" /old_locus_tag="CMS1203" /codon_start=1 /transl_table=11 /product="cell division protein/DNA translocase FtsK" /protein_id="YP_001709940.1" /db_xref="GI:170781608" /db_xref="GeneID:6157088" /translation="MPRPGGERRARPGVPSATAVRDNVGRMATSTRSTSRAGKTSSGA PRATPPRKGRTAETKQQTVAYPVQSERRGPLVAAWMGLAHATGALFRALGPEKLAKEE RRDGIPFLLVVLAIAGVVVEWFNPLNDVAMAFDAYTFGGLFGRVAFALPIVMVLLALW LFRHPSSVSDNGRIGVGVSLFLVSIAALCHIFNGAPDPRDGMLALARAGGVLGWVLAA PLSLLITSIGAGVVAGILLVLSLFIITRTPPNRVGMRLRELYSYLFGAPPVDEEQRAA DRAARKAQATEQVELEGLDDDGPVDTDSLPWWRRNRSQREDAPAFDSPVLAPHAGSDD EVVRGAAAEAPTTVIDRTVDPDASRPEPGAFAGDDAATRRIDLDAPVDATATAILPSV PVHPTGIRDDDEPAVLPGFEDDGSDAPIVSGESDTPQAPYRLPAASTLAPGTPAKSRS SVNDEVVRALTEVLTNFQVDATVTGFSRGPTVTRYELELAPGVKVERVTALAKNISYA VASNEVRILSPIPGRSAIGVEIPNTDREIVSLGDVLRSSAATNSAHPMTIGVGKDVEG GYVIANLAKMPHLLVAGSTGSGKSSFVNSMITSLLMRAKPSDVRMVLIDPKRVELTIY AGVPHLITPIITNPKKAAEALQWVVKEMDMRYDDLASFGFRHIDDFNKAVTSGSIVLP EGSERTLRPYPYLLVVVDELADLMMVAPRDVEDSIVRITQLARAAGIHLVLATQRPSV DVVTGLIKANVPSRLAFAVSSMTDSRVILDQPGADKLIGQGDGLFLPMGANKAVRVQG AWVQEAEIAKVVEHVTRQARPEYRQDVAVAAERKEIDADIGDDLEVLLAAAELVVSTQ FGSTSMLQRKLRVGFAKAGRLMDLLEAREIVGPSEGSKARDVLVSAEQLPGVLATLRW ETPAAAPAPAAAPAPAPVPDADDGNRYPSDPLHKDLDAYEQVEAEGDDDAWGLTGRD" misc_feature order(1257192..1257245,1257288..1257356,1257393..1257461, 1257474..1257527,1257540..1257608) /gene="ftsK" /locus_tag="CMS_1203" /old_locus_tag="CMS1203" /note="5 probable transmembrane helices predicted for CMS1203 by TMHMM2.0 at aa 107-124, 139-161, 174-196,201-218 and 223-245" misc_feature 1258488..1259093 /gene="ftsK" /locus_tag="CMS_1203" /old_locus_tag="CMS1203" /inference="protein motif:HMMPfam:PF01580" /note="HMMPfam hit to PF01580, Cell divisionFtsK/SpoIIIE protein, score 1e-78" misc_feature 1258620..1258643 /gene="ftsK" /locus_tag="CMS_1203" /old_locus_tag="CMS1203" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1259793..1260422 /locus_tag="CMS_1204" /old_locus_tag="CMS1204" /db_xref="GeneID:6158697" CDS 1259793..1260422 /locus_tag="CMS_1204" /old_locus_tag="CMS1204" /codon_start=1 /transl_table=11 /product="putative phosphatidylglycerophosphate synthase" /protein_id="YP_001709941.1" /db_xref="GI:170781609" /db_xref="GeneID:6158697" /translation="MADRSASSVPGTGAPRVWRAGDSPASPWNVANVLTIVRILLAPV FVVLLAADDGADGPLRYAAATLFILAIATDGVDGHIARSRNLVTDLGKLLDPIADKVL TGAALVMLSVLGELPWWVTIVILVRELGITAYRFAVLRDRVVAASRGGKLKTVAQAVA ISVALLPLWDVVGDGMHVVNTVLMSIAFVLTVLSGLDYMRQALRAERAS" misc_feature order(1259874..1259942,1259967..1260035,1260093..1260161, 1260222..1260290,1260318..1260386) /locus_tag="CMS_1204" /old_locus_tag="CMS1204" /note="5 probable transmembrane helices predicted for CMS1204 by TMHMM2.0 at aa 28-50, 59-81, 101-123, 144-166 and 176-198" misc_feature 1259982..1260395 /locus_tag="CMS_1204" /old_locus_tag="CMS1204" /inference="protein motif:HMMPfam:PF01066" /note="HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 1.2e-32" misc_feature 1260021..1260089 /locus_tag="CMS_1204" /old_locus_tag="CMS1204" /note="PS00379 CDP-alcohol phosphatidyltransferases signature." gene 1260419..1260940 /locus_tag="CMS_1205" /old_locus_tag="CMS1205" /db_xref="GeneID:6157089" CDS 1260419..1260940 /locus_tag="CMS_1205" /old_locus_tag="CMS1205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709942.1" /db_xref="GI:170781610" /db_xref="GeneID:6157089" /translation="MSSPDDLTDEQLAERVIAALVASGRRIAVAESLTGGLLTAALVG VPGASRALLGGIVSYDTALKRTILGVDSSILAVHGAVHPDVARQMARGVRQTCAIDGR PADVGVSTTGAAGPDPQDGQPPGTAFVGLSIDGDSRAIALHLDGDRQAVRAGVVRAAL ATLVDALGSGGNN" misc_feature 1260443..1260919 /locus_tag="CMS_1205" /old_locus_tag="CMS1205" /inference="protein motif:HMMPfam:PF02464" /note="HMMPfam hit to PF02464, CinA, C-terminal, score 1.4e-47" gene 1261080..1261388 /locus_tag="CMS_1206" /old_locus_tag="CMS1206" /db_xref="GeneID:6157090" CDS 1261080..1261388 /locus_tag="CMS_1206" /old_locus_tag="CMS1206" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709943.1" /db_xref="GI:170781611" /db_xref="GeneID:6157090" /translation="MVLVRQEIGDVLRDFRLQKGRTLRQVASKASVALGYLSEVERGQ KEASSEILASVADALDTPISVIMREVGDRLAVIEGLNPIPDTIPDDLVAGFDSDLVAR" misc_feature 1261113..1261277 /locus_tag="CMS_1206" /old_locus_tag="CMS1206" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 4.5e-10" gene 1261465..1261698 /locus_tag="CMS_1207" /old_locus_tag="CMS1207" /db_xref="GeneID:6157091" CDS 1261465..1261698 /locus_tag="CMS_1207" /old_locus_tag="CMS1207" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709944.1" /db_xref="GI:170781612" /db_xref="GeneID:6157091" /translation="MVGMRLSEFQRAVSDEFGSGYGPVLVSDLVLGELGGRTSAQALK DGTPAREVWLALCRAQDVPRSRWNGAGVPEPRA" gene 1261836..1263053 /gene="recA" /locus_tag="CMS_1208" /old_locus_tag="CMS1208" /db_xref="GeneID:6157092" CDS 1261836..1263053 /gene="recA" /locus_tag="CMS_1208" /old_locus_tag="CMS1208" /note="catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs" /codon_start=1 /transl_table=11 /product="recombinase A" /protein_id="YP_001709945.1" /db_xref="GI:170781613" /db_xref="GeneID:6157092" /translation="MSAAPHNVHLAEITRRLVGTGPRGQRERSDSLQATHLRHEEHPM ASSADREKSLETALAQIDRQFGKGSVMRLGSDERAPVAVIPTGSVALDVALGIGGLPR GRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLV SQPDTGEQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQA LRKLTGGLNQTQTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIRRIETLK DGTDAVGNRTRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHEIVRKSGAW YTYDGDQLGQGKENSRKHLLNNPEIAAEIEQKIKVKLGLVKDPNADAAAAADAAPAPV VAVAPKASARKSA" misc_feature 1261989..1262954 /gene="recA" /locus_tag="CMS_1208" /old_locus_tag="CMS1208" /inference="protein motif:HMMPfam:PF00154" /note="HMMPfam hit to PF00154, RecA bacterial DNA recombination protein, score 3e-237" misc_feature 1262163..1262186 /gene="recA" /locus_tag="CMS_1208" /old_locus_tag="CMS1208" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1262607..1262633 /gene="recA" /locus_tag="CMS_1208" /old_locus_tag="CMS1208" /note="PS00321 recA signature." gene 1263288..1264223 /gene="recX" /locus_tag="CMS_1209" /old_locus_tag="CMS1209" /db_xref="GeneID:6158921" CDS 1263288..1264223 /gene="recX" /locus_tag="CMS_1209" /old_locus_tag="CMS1209" /codon_start=1 /transl_table=11 /product="putative regulatory protein" /protein_id="YP_001709946.1" /db_xref="GI:170781614" /db_xref="GeneID:6158921" /translation="MASTPPVDEPPAPHVEPTHPSRGRSVTEVDGIVTIGAAVDASEA GRALAAQERIAEARRVLAEAEAQAARGSGDAVGAFPEVPPAEDGPADDPTPAAWRAEQ ERAERARAKAEQDEAYRQDMLRLEEDRVEDERREAEAEEERAAERTPERQRRRADNVL ANRLRGRGLSLAEAREVLDGAEIDPDIAEETLARYVSLQYIDEAALAEQILHTHLDRK GLGRRSVEMEMRRRKLDPLVIEEAMAEQPDDELARATEVAMKRVGQLSSYDDETAERR LTSFLMRRGYGGGVVRDAAKAALATRRGSSRVRFR" misc_feature 1263819..1264187 /gene="recX" /locus_tag="CMS_1209" /old_locus_tag="CMS1209" /inference="protein motif:HMMPfam:PF02631" /note="HMMPfam hit to PF02631, Regulatory protein RecX,score 0.0095" gene 1264274..1265866 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /db_xref="GeneID:6158927" CDS 1264274..1265866 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /note="catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)" /codon_start=1 /transl_table=11 /product="(dimethylallyl)adenosine tRNA methylthiotransferase" /protein_id="YP_001709947.1" /db_xref="GI:170781615" /db_xref="GeneID:6158927" /translation="MSTVAEHVRAAPSSVDRPRTYEVRTYGCQMNVHDSERLTGSLEA AGYVSAEGAEADIVVINTCAVRENADNKLYGNLGHLAGVKRRHEGMQIAVGGCLAQKD RATVLEKAPWVDVVFGTHNMGALPTLLERARHNGEAQLEILESLETFPSTLPTKRDEI ASGWVSISVGCNNTCTFCIVPALRGKEKDRRPGDILAEIQALVDDGAVEVTLLGQNVN SYGVEFGDRQAFGKLLRAAGAIEGLERIRFTSPHPAAFTDDVIDAMAETPAVMPQLHM PLQSGSDRILKAMRRSYRSERFLGILDRVRTRVPDAAITTDIIVGFPGETEEDFQETL RVVEAARFSSAFTFQYSIRPGTPAATMEEQVPADVVKERYGRLTALQERISHEENQRV VGRTVEVLVSAHEGRKDGDTRRVTGRAQDGRLVHLDVPEGSAEPRPGDAVDVEVTRAA PFHLIADSVDGAPLRIRRTRAGDAWERAQADSCGVPTPATGASAGAAPRVSLGLPTLR VPTTASTSAPVGDGSAHPRHRA" misc_feature 1264331..1264627 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /inference="protein motif:HMMPfam:PF00919" /note="HMMPfam hit to PF00919, Protein of unknown function UPF0004, score 2.1e-41" misc_feature 1264766..1265284 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /inference="protein motif:HMMPfam:PF04055" /note="HMMPfam hit to PF04055, Radical SAM, score 2.9e-33" misc_feature 1264766..1264828 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /note="PS01278 Uncharacterized protein family UPF0004 signature." misc_feature 1265441..1265653 /locus_tag="CMS_1210" /old_locus_tag="CMS1210" /inference="protein motif:HMMPfam:PF01938" /note="HMMPfam hit to PF01938, Deoxyribonuclease/rho motif-related TRAM, score 0.032" gene 1265863..1266786 /gene="miaA" /locus_tag="CMS_1211" /old_locus_tag="CMS1211" /db_xref="GeneID:6157093" CDS 1265863..1266786 /gene="miaA" /locus_tag="CMS_1211" /old_locus_tag="CMS1211" /note="IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /protein_id="YP_001709948.1" /db_xref="GI:170781616" /db_xref="GeneID:6157093" /translation="MTPIVAVVGATGTGKSALSLDIAERLRAEGRAAEIVNADAMQLY RGMDIGTAKLPEVGRRGVPHHMLDVLDVTAEATVAAYQEEARRAIGGILERGAVPILV GGSGLYVSSVLFDYDFPGTDPEIRQRLERELEATGPGMIHRRLRELDPVAAQRIGAHN GRRLVRALEVVEITGPQPERATAEPRPWHPARILALTLPREELVPRLDARVSGMWRDG LVDEVAGLLSAGLADGVTASRAIGYAQAARQLAGELSEEEAMEETRALTRRYARRQVS WFGRYADAVRLDARDDRLLEHALDALPAARP" misc_feature 1265887..1265910 /gene="miaA" /locus_tag="CMS_1211" /old_locus_tag="CMS1211" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1265983..1266732 /gene="miaA" /locus_tag="CMS_1211" /old_locus_tag="CMS1211" /inference="protein motif:HMMPfam:PF01715" /note="HMMPfam hit to PF01715, tRNA isopentenyltransferase, score 1.4e-92" gene 1266796..1267674 /gene="dapF" /locus_tag="CMS_1212" /old_locus_tag="CMS1212" /db_xref="GeneID:6157094" CDS 1266796..1267674 /gene="dapF" /locus_tag="CMS_1212" /old_locus_tag="CMS1212" /note="involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="YP_001709949.1" /db_xref="GI:170781617" /db_xref="GeneID:6157094" /translation="MADLQFTKGQGTGNDFVLFADPAGEIDLTDTQVQALCDRHFGIG ADGTIRAVLSSRIPEGRAALDEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENG LIELPPGRTVPIGTRAGVRDVQRSGSGFQVDLGRWALAGGEPLVRAKDLQVARPGLGI DVGNPHVVVALSSEDELAEADLAFAPQLDPEPAEGANVELVVPADPLIVDGVGHITMR VHERGSGETLSCGTGAAAAALAIRHWAGAAAPHQWRVQLPGGVLGVRMFPTEDGEHVG LSGPAELVFDGVVALA" misc_feature 1266811..1267215 /gene="dapF" /locus_tag="CMS_1212" /old_locus_tag="CMS1212" /inference="protein motif:HMMPfam:PF01678" /note="HMMPfam hit to PF01678, Diaminopimelate epimerase,score 2e-25" misc_feature 1267027..1267071 /gene="dapF" /locus_tag="CMS_1212" /old_locus_tag="CMS1212" /note="PS01326 Diaminopimelate epimerase signature." misc_feature 1267267..1267647 /gene="dapF" /locus_tag="CMS_1212" /old_locus_tag="CMS1212" /inference="protein motif:HMMPfam:PF01678" /note="HMMPfam hit to PF01678, Diaminopimelate epimerase,score 2.9e-14" gene complement(1267748..1268365) /locus_tag="CMS_1213" /old_locus_tag="CMS1213" /db_xref="GeneID:6157095" CDS complement(1267748..1268365) /locus_tag="CMS_1213" /old_locus_tag="CMS1213" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709950.1" /db_xref="GI:170781618" /db_xref="GeneID:6157095" /translation="MADAHYFSSSPAGPLRTRTITVELGGRMVDVETAGGVFSPEHVD QGTLVLLRNVPAPPAEGHLLDVGCGWGPVALDLAIRAPSATVWAVDVNERALELTRAN ARSLGLDNVNAVLPGDVPEGLSFATVWSNPPIRVGKEVLHQILLDWMPRLAPDADAWL VVQRNLGSDSLQRWLVDALPAGLETTRAASNKGFRVLRVHRSADS" gene 1268407..1269972 /locus_tag="CMS_1214" /old_locus_tag="CMS1214" /db_xref="GeneID:6157096" CDS 1268407..1269972 /locus_tag="CMS_1214" /old_locus_tag="CMS1214" /codon_start=1 /transl_table=11 /product="putative GTP-binding protein" /protein_id="YP_001709951.1" /db_xref="GI:170781619" /db_xref="GeneID:6157096" /translation="MTTHDGHDHEPADTTTTSTENIDRDDVVARVLGRAENRSAGYAL FRGSGAQALSAAPDTEQGSDGDQSERADRQALRRVPGLSTELEDVTEVEYRQLRLENV VLIGVYSQGSVDDAENSMRELAALAETAGAVVLDGLLQRRPTPDPSTYFGRGKAEELR ALVAAVGADTVIADTELAPSQRRALEDVVKVKVIDRTAVILDIFSQHAKSREGKAQVE LAQLQYLLPRLRGWGDSMSRQAGGQVGGAGAGMGSRGPGETKIELDRRRINTRMARLR KQIAAMKPARDTKRANRDRHSVPSVAIVGYTNAGKSSLLNRVTKAGVLVENALFATLD ATVRKTETDQGQLYTLADTVGFVRNLPHQLVEAFRSTLEELADSDVLVHVVDASHPDP GAQLATVHEVIAEVNASAIPEIVVFNKSDLASADDRVVLRGLAPQGVFVSARTGEGVE ELRRRIAELLPQPTIEVDLLVPFEHGEVVAMLHDGAKVLETSYVEEGTRVRALVTAEQ QAQVQAYAVAPAA" misc_feature 1269301..1269669 /locus_tag="CMS_1214" /old_locus_tag="CMS1214" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 1.5e-39" misc_feature 1269319..1269342 /locus_tag="CMS_1214" /old_locus_tag="CMS1214" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1270046..1270726) /gene="lexA" /locus_tag="CMS_1215" /old_locus_tag="CMS1215" /db_xref="GeneID:6157097" CDS complement(1270046..1270726) /gene="lexA" /locus_tag="CMS_1215" /old_locus_tag="CMS1215" /EC_number="3.4.21.88" /note="Represses a number of genes involved in the response to DNA damage" /codon_start=1 /transl_table=11 /product="LexA repressor" /protein_id="YP_001709952.1" /db_xref="GI:170781620" /db_xref="GeneID:6157097" /translation="MTDERAAGGGATRRRKSLSEKQISILEFIQRTIAGQGYPPSMRE IGDAVGLASLSSVTHQLNQLELSGYLRRDPNRPRALEVLIDLPGTGTAESGEPSTPVG DAAMVPMVGRIAAGIPITAEQMVEEVFPLPRQLVGKGDLFMLRVVGDSMIDAAICDGD WVVVRQQKTAENGDIVAAMLDDEATVKVFRQRDGHTWLLARNSAFEPILGDFAEVVGK VVAVMRSV" misc_feature complement(1270088..1270294) /gene="lexA" /locus_tag="CMS_1215" /old_locus_tag="CMS1215" /inference="protein motif:HMMPfam:PF00717" /note="HMMPfam hit to PF00717, Peptidase S24, S26A and S26B, score 8.5e-20" misc_feature complement(1270490..1270684) /gene="lexA" /locus_tag="CMS_1215" /old_locus_tag="CMS1215" /inference="protein motif:HMMPfam:PF01726" /note="HMMPfam hit to PF01726, LexA DNA-binding region,score 1.6e-23" gene 1271174..1271491 /locus_tag="CMS_1215A" /old_locus_tag="CMS1215A" /db_xref="GeneID:6158789" CDS 1271174..1271491 /locus_tag="CMS_1215A" /old_locus_tag="CMS1215A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709953.1" /db_xref="GI:170781621" /db_xref="GeneID:6158789" /translation="MPRTRLRITRRGRFVLTALVAAPLALGAGLVALNGGAAVASKDA AGTTFEYVTVSSGQSLWDLAEEIAPSADPRDVIASVVDLNRLPTSDVAAGQQLAVPAQ YAH" gene 1271593..1272201 /gene="hisB" /locus_tag="CMS_1216" /old_locus_tag="CMS1216" /db_xref="GeneID:6157098" CDS 1271593..1272201 /gene="hisB" /locus_tag="CMS_1216" /old_locus_tag="CMS1216" /EC_number="4.2.1.19" /note="catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /protein_id="YP_001709954.1" /db_xref="GI:170781622" /db_xref="GeneID:6157098" /translation="MSTLARTAHVTRQTSESSIDLRLDLDGTGASEISTSVPFYDHML TAFAKHSLTDLTVTATGDTHIDVHHTVEDIGIVLGQAIREALGDKSGIARFGDALVPL DEALVQSVVDISGRPFLVHSGEPAGFEMHLIGGHFTGSMVRHVFEAITFHAGLTVHVT VLGGRDPHHIAEAEFKSFARAFRQAKELDPRVSGIPSTKGAL" misc_feature 1271695..1272141 /gene="hisB" /locus_tag="CMS_1216" /old_locus_tag="CMS1216" /inference="protein motif:HMMPfam:PF00475" /note="HMMPfam hit to PF00475, Imidazoleglycerol-phosphate dehydratase, score 1.4e-67" misc_feature 1272082..1272120 /gene="hisB" /locus_tag="CMS_1216" /old_locus_tag="CMS1216" /note="PS00955 Imidazoleglycerol-phosphate dehydratase signature 2." gene 1272198..1272839 /gene="hisH" /locus_tag="CMS_1217" /old_locus_tag="CMS1217" /db_xref="GeneID:6158749" CDS 1272198..1272839 /gene="hisH" /locus_tag="CMS_1217" /old_locus_tag="CMS1217" /EC_number="2.4.2.-" /note="with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisH" /protein_id="YP_001709955.1" /db_xref="GI:170781623" /db_xref="GeneID:6158749" /translation="MTRPSVVVLDYGSGNVHSAVKALELAGADVELTGDPRRAHEADG LLVPGVGAFSAVMAALRAAGGDRVVDRRLAGGRPVLGICVGMQVMFDRGVERDVDVAG LGEWPGTVDRIQSDVLPHMGWNSVEVPEGSALFAGLEEERFYFVHSYAARAWGIDPLP PLPAPRVTWATHGERFVAAVENGPLTATQFHPEKSGAAGIRLLANWLGTLRAA" misc_feature 1272216..1272824 /gene="hisH" /locus_tag="CMS_1217" /old_locus_tag="CMS1217" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 1.4e-38" misc_feature 1272429..1272464 /gene="hisH" /locus_tag="CMS_1217" /old_locus_tag="CMS1217" /note="PS00442 Glutamine amidotransferases class-I active site." gene 1272904..1273653 /gene="priA" /locus_tag="CMS_1218" /old_locus_tag="CMS1218" /db_xref="GeneID:6158755" CDS 1272904..1273653 /gene="priA" /locus_tag="CMS_1218" /old_locus_tag="CMS1218" /EC_number="5.3.1.24" /note="catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosyl isomerase A" /protein_id="YP_001709956.1" /db_xref="GI:170781624" /db_xref="GeneID:6158755" /translation="MSEFTSTPRLTLLPAVDVAGGQAVRLTQGAAGTETGYGDPVDAA RDWAEQGAKWLHLVDLDAAFGRGDNLSVISRVIRAIDGVQIELSGGIRDDRSLDVALE SGATRINLGTAALENPEWAASVIAQHGEAVAVGLDVRGRTLSARGWTQDGGDIWEVLE RLEDAGCARYVVTDVTKDGTLQGPNLQLLRDVLERTERPVVASGGVSSLDDIQALREL VPLGLEGAIVGKALYAGAFTLGEALDVAGER" misc_feature 1272934..1273617 /gene="priA" /locus_tag="CMS_1218" /old_locus_tag="CMS1218" /inference="protein motif:HMMPfam:PF00977" /note="HMMPfam hit to PF00977, Histidine biosynthesis protein, score 1.5e-81" gene 1273650..1274417 /locus_tag="CMS_1219" /old_locus_tag="CMS1219" /db_xref="GeneID:6158880" CDS 1273650..1274417 /locus_tag="CMS_1219" /old_locus_tag="CMS1219" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709957.1" /db_xref="GI:170781625" /db_xref="GeneID:6158880" /translation="MTGSTPHADSAGTPWAGRSFEPTPFPDDDGSAPPAVAEALARHG RGEAGQAEVVDALRDARLLIPLVARLGDEGEGAHGLRADKSAELSIITVAGPDGRTVM PVFTSVAAMGRWNAKARPVPADAVRMALAAASEETDLVVVDPMSDTEFVLRRPAVWAV ARSLPWIPSPEDPDVAAALQASVVEEPAVVSLRTAPGDPRARLEGPELMIVLELVDGL DRTALDALLARLQGEWSRSAVLADRVDSMGLRITSAG" gene complement(1274511..1274969) /locus_tag="CMS_1220" /old_locus_tag="CMS1220" /db_xref="GeneID:6157099" CDS complement(1274511..1274969) /locus_tag="CMS_1220" /old_locus_tag="CMS1220" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709958.1" /db_xref="GI:170781626" /db_xref="GeneID:6157099" /translation="MTDPTPDPATTPTDAHVHRFEEPDVATGSPAPAAGAADDDTADF VADQYARDIAEVSAVEVITTTAVHLMSAAAVKCGLADDPATQTDLAEARKLIISLAGL VTAASPELGDQHARSLRDGLRSLQLAFREASPYPDAVGKGPGEKYTGPVS" gene 1275525..1275956 /gene="infC" /locus_tag="CMS_1221" /old_locus_tag="CMS1221" /db_xref="GeneID:6157100" CDS 1275525..1275956 /gene="infC" /locus_tag="CMS_1221" /old_locus_tag="CMS1221" /codon_start=1 /transl_table=11 /product="putative translation initiation factor IF-3" /protein_id="YP_001709959.1" /db_xref="GI:170781627" /db_xref="GeneID:6157100" /translation="MAKIMDYGKFKYEAAQKAKEARRNQANTILKEVRFRLKIDKHDY ETKRKRAEGFLQDGDKVKAMILFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTID GRNMVMVIGPHKNKSEAKAEANAKRDATKASAREAREENNA" misc_feature 1275531..1275572 /gene="infC" /locus_tag="CMS_1221" /old_locus_tag="CMS1221" /note="PS00938 Initiation factor 3 signature." misc_feature 1275603..1275866 /gene="infC" /locus_tag="CMS_1221" /old_locus_tag="CMS1221" /inference="protein motif:HMMPfam:PF00707" /note="HMMPfam hit to PF00707, Initiation factor 3, score 2.3e-40" gene 1275949..1276143 /gene="rpmI" /locus_tag="CMS_1222" /old_locus_tag="CMS1222" /db_xref="GeneID:6158772" CDS 1275949..1276143 /gene="rpmI" /locus_tag="CMS_1222" /old_locus_tag="CMS1222" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L35" /protein_id="YP_001709960.1" /db_xref="GI:170781628" /db_xref="GeneID:6158772" /translation="MPKQKTHSGAKKRFKVTGSGKIMKQQAGMRHNLEVKSSKRKARL NQDQPLAKADMKVAKKLLGR" misc_feature 1275961..1276134 /gene="rpmI" /locus_tag="CMS_1222" /old_locus_tag="CMS1222" /inference="protein motif:HMMPfam:PF01632" /note="HMMPfam hit to PF01632, Ribosomal protein L35,score 1.6e-16" gene 1276190..1276582 /gene="rplT" /locus_tag="CMS_1223" /old_locus_tag="CMS1223" /db_xref="GeneID:6158960" CDS 1276190..1276582 /gene="rplT" /locus_tag="CMS_1223" /old_locus_tag="CMS1223" /note="binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20" /protein_id="YP_001709961.1" /db_xref="GI:170781629" /db_xref="GeneID:6158960" /translation="MARVKRAVNAHKKRRVILERAAGYRGQRSRLYRKAKEQVTHSLV YAYRDRRAKKGEFRRLWIQRINAAARANGLTYNRLIQGLSLAGVQVDRRILAELAVHE PATFASLVQTAKTALPANTSAPKVAANA" misc_feature 1276193..1276516 /gene="rplT" /locus_tag="CMS_1223" /old_locus_tag="CMS1223" /inference="protein motif:HMMPfam:PF00453" /note="HMMPfam hit to PF00453, Ribosomal protein L20,score 2.8e-44" gene 1276646..1277446 /locus_tag="CMS_1224" /old_locus_tag="CMS1224" /db_xref="GeneID:6158950" CDS 1276646..1277446 /locus_tag="CMS_1224" /old_locus_tag="CMS1224" /codon_start=1 /transl_table=11 /product="putative rRNA methylase" /protein_id="YP_001709962.1" /db_xref="GI:170781630" /db_xref="GeneID:6158950" /translation="MLDYPRSPRVRGVAKLAKRDARADTGLFLLEGPQAVSEALAFRP DLVQELFATPTALDRYPDLARAVRESGIEVEFVTEDVIASMADTVTPQGVVGVCRQFP TSLKQILGDEPLLIAILEEVRDPGNAGTIIRAADAAGADAVILTGRSVDLYNPKVVRA TTGSLFHLPVAIMPELDAVLERVRAAGLQVLAADVKGDDLLAERTSGGLAGPTAWLFG NEARGLQDEHLALADRAVVVPIYGQAESMNLATAASVCLYESAFAQRA" misc_feature 1276985..1277419 /locus_tag="CMS_1224" /old_locus_tag="CMS1224" /inference="protein motif:HMMPfam:PF00588" /note="HMMPfam hit to PF00588, tRNA/rRNA methyltransferase (SpoU), score 2.7e-29" gene 1277598..1278386 /locus_tag="CMS_1225" /old_locus_tag="CMS1225" /db_xref="GeneID:6157101" CDS 1277598..1278386 /locus_tag="CMS_1225" /old_locus_tag="CMS1225" /codon_start=1 /transl_table=11 /product="putative glutamate/aspartate uptake system ATP-binding protein" /protein_id="YP_001709963.1" /db_xref="GI:170781631" /db_xref="GeneID:6157101" /translation="MEQSPTADPASPAAAAVGEPLVVVSHVNKHFGDLHVLKDISTTV NRGEVVVVIGPSGSGKSTLCRAINRLETIDDGTITIDGQDLPSEGAELARLRADVGMV FQSFNLFVHKTVLENVTLGPIKVRKQGKAEAEKRAMELLDRVGVANQAQKMPAQLSGG QQQRVAIARALAMDPKLILLDEPTSALDPEMITEVLDVMVGLAKDGMTMMVVTHEMGF ARKAADRVIFMADGAIEEDTTPSAFFDDPQSPRAKDFLSKILAH" misc_feature 1277736..1278293 /locus_tag="CMS_1225" /old_locus_tag="CMS1225" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.4e-69" misc_feature 1277757..1277780 /locus_tag="CMS_1225" /old_locus_tag="CMS1225" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1278066..1278110 /locus_tag="CMS_1225" /old_locus_tag="CMS1225" /note="PS00211 ABC transporters family signature." gene 1278478..1279470 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /db_xref="GeneID:6157102" CDS 1278478..1279470 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /codon_start=1 /transl_table=11 /product="putative glutamate/aspartate-binding transport protein" /protein_id="YP_001709964.1" /db_xref="GI:170781632" /db_xref="GeneID:6157102" /translation="MHLAPRAIPIASVIHLTTQGTGTMKNRKLTIAAAAAIVVVALTG CGAAGSASNSGIDAGTNAPENGDGPYKLELTENPTFDEGTTMARLAAAGEMKVGTKYD QPLFGLAGLDGKPAGFDVAIAALIASKMGIPFDGITFTETVSANREPFIQNGSVDAVV ATYTINDKRKEVVGFAGPYYVAGQALMVLADDTTINTPEDVRGKQVCSVAGSTPAANI EATFGAVVVPTDVYSKCLDPLRNGQVSAVTTDNVILSGFIDQNEGEFKLVGGGETFTQ EPYGIGIAKGDEAFRTFINDTLQEAYDDGTWARLFEATAGTVIDTPEPPAIDRY" sig_peptide 1278478..1278630 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /note="Signal peptide predicted for CMS1226 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.289 between residues 51 and 52" misc_feature 1278562..1278630 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /note="1 probable transmembrane helix predicted for CMS1226 by TMHMM2.0 at aa 29-51" misc_feature 1278580..1278612 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1278760..1279428 /locus_tag="CMS_1226" /old_locus_tag="CMS1226" /inference="protein motif:HMMPfam:PF00497" /note="HMMPfam hit to PF00497, Bacterial extracellular solute-binding protein, family 3, score 1.7e-40" gene 1279586..1280233 /locus_tag="CMS_1227" /old_locus_tag="CMS1227" /db_xref="GeneID:6157103" CDS 1279586..1280233 /locus_tag="CMS_1227" /old_locus_tag="CMS1227" /codon_start=1 /transl_table=11 /product="putative glutamate permease" /protein_id="YP_001709965.1" /db_xref="GI:170781633" /db_xref="GeneID:6157103" /translation="MDVILDNLDVFLRGFGGTLRLLLTTVLFALPLGVVIAAMRISPV ASLRATSTIYVELLRNTPLLLVFTFFSVVITSISGALPFMTAAVLALTLYTAPFFAEA IRSGINSVPVGQAEAARSIGLTFSQTLGSVILPQAVRTVIPPLINVVIALTKNTSIAG AYFIYELFNVGRDVANANGDAVVWVFVGVAFFYLIITVPLGQLADHLEKRVAVSR" misc_feature 1279616..1280224 /locus_tag="CMS_1227" /old_locus_tag="CMS1227" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.1e-23" misc_feature order(1279643..1279711,1279772..1279840,1280021..1280089, 1280126..1280194) /locus_tag="CMS_1227" /old_locus_tag="CMS1227" /note="4 probable transmembrane helices predicted for CMS1227 by TMHMM2.0 at aa 20-42, 63-85, 146-168 and 181-203" misc_feature 1279904..1279990 /locus_tag="CMS_1227" /old_locus_tag="CMS1227" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 1280230..1281054 /locus_tag="CMS_1228" /old_locus_tag="CMS1228" /db_xref="GeneID:6157104" CDS 1280230..1281054 /locus_tag="CMS_1228" /old_locus_tag="CMS1228" /codon_start=1 /transl_table=11 /product="putative glutamate permease" /protein_id="YP_001709966.1" /db_xref="GI:170781634" /db_xref="GeneID:6157104" /translation="MSQVLYDVPGPRARRRSRVLSVVTGAIVVAVLAFAAVKLQQAGQ FSPDIWLVLNDPLVWQLLLRGLVVVLQSAAVAAVLAILLGMVLALLRMSEHRVIRYAV TVVLEFFRGMPVLLMMLFIYLIFPIGPYWSVVTALTLYNGAIIGEALRSGILGLPRGQ REAGLAIGLRPLQNRLLVEFPQAFRTMLPIIVAQLVVLIKDTALGTIVSLVGLTKQGE LILEATSRANSLPIFVVMVGMYLVLNLSVSTIARRLARKRGPRVAKTVAAGTSQGA" sig_peptide 1280230..1280334 /locus_tag="CMS_1228" /old_locus_tag="CMS1228" /note="Signal peptide predicted for CMS1228 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.684 between residues 35 and 36" misc_feature order(1280287..1280340,1280431..1280499,1280560..1280628, 1280914..1280982) /locus_tag="CMS_1228" /old_locus_tag="CMS1228" /note="4 probable transmembrane helices predicted for CMS1228 by TMHMM2.0 at aa 20-37, 68-90, 111-133 and 229-251" misc_feature 1280413..1281009 /locus_tag="CMS_1228" /old_locus_tag="CMS1228" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.5e-21" gene 1281129..1282166 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /db_xref="GeneID:6157105" CDS 1281129..1282166 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /EC_number="6.1.1.20" /note="catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase subunit alpha" /protein_id="YP_001709967.1" /db_xref="GI:170781635" /db_xref="GeneID:6157105" /translation="MSESQISEETVGAAVEQAMAALAATTDSASLAQARSAHIGEASP LARLNGSLRSLPPEQRKDAGKLVGQSRARVTQAFQAREAEIQEQEAAERLVAEAVDVT ALPSRWRAGARHPLTMLEERIADIFVGMGWQVNEGPELESEWFNFDALNFPPDHPARA MQDSFYVDPTDAHLVLRTHTSPVQIRTLLADELPVYTIAQGRTFRSDELDATHTPAFR QIEGIAIDRGLTMAHLRGTLEHFARSMFGREARVRLRPNYFPFTEPSAEMDVWHPAAA GGPRWIEWGGCGMVNPNVLRSAGIDPDEYQGFAFGMGTERTLMFRNDLSDMRDIVEGD IRFGAQFGMVV" misc_feature 1281195..1281413 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /inference="protein motif:HMMPfam:PF02912" /note="HMMPfam hit to PF02912, Aminoacyl tRNA synthetase,class II, N-terminal, score 8.2e-15" misc_feature 1281300..1281365 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /note="Predicted helix-turn-helix motif with score 1334.000, SD 3.73 at aa 58-79, sequence EQRKDAGKLVGQSRARVTQAFQ" misc_feature 1281471..1282112 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /inference="protein motif:HMMPfam:PF01409" /note="HMMPfam hit to PF01409, Phenylalanyl-tRNA synthetase, class IIc, score 2.1e-119" misc_feature 1281738..1281791 /gene="pheS" /locus_tag="CMS_1229" /old_locus_tag="CMS1229" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." gene 1282169..1284712 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /db_xref="GeneID:6158865" CDS 1282169..1284712 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /EC_number="6.1.1.20" /note="catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase subunit beta" /protein_id="YP_001709968.1" /db_xref="GI:170781636" /db_xref="GeneID:6158865" /translation="MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISG PVVVGQVLEASPEPQTNGKTINWCSVRVAPEGATAADGGEDVRGIVCGAHNFVVGDKV VVSLPGAVLPGPFPISARKTYGHVSDGMIASSRELGLGEEHDGILVLSTLGLDPEVGT DALALLHLDDQAVEVNVTPDRGYAFSIRGIAREYAHATGAAFTDPADALALLAADAPV QGVEVRVDDAAPIRGRVGADVFVTRVVSGLDLSRPTPPWMVSRLTLAGVRSISLAVDI TNYVMLELGQPLHAYDLDRLQGGIVVRRAAEGETLVTLDGRERALHVEDLVIADGSGP VGLAGVMGGAATEIGAGTSRVLIEAAGFDPVSIARTARRHKLPSEASKRFERGVDPRI APAAAARAVQLLEELAGGHAEGLGSILDTTAPREAVELSLAYPASLVGVDYTADEVRH ALVDVGCALEERDGVLVVTPPTWRPDLRHRADLVEEVARIVGYDRIPAVLPVAPPGRG LTAAQRLRRQASIALAAGGLTEVMGSPFASEAQNARFGAADRDDAPAVRLANPLDVAF PFLRRSLLPGLVDIARRNLSRGSTDLAIFETGTVFLPRAGVAYGSPEMPPGAARPDAD ALRALDAGIPPQPRHVGVLILGDAVPKQPGTPAQRAGLVDALDAVRQLAHAVGVEIRF EQGAHIALHPGRTAAVEAVTADGPVIVGFAGELLPALAAELDLPERVALAEVDLDRLV ELAGGAVEVRTLTSMPVATQDLSLVVPLDVPAGELLRTVVEGAGELLETARLVDDYRG PGVADGTRSLTLALRFRAPDRTLTAAEASAARDGSVRLAAERFGAALRE" misc_feature 1282304..1282633 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /inference="protein motif:HMMPfam:PF01588" /note="HMMPfam hit to PF01588, t-RNA-binding region, score 2.5e-05" misc_feature 1282874..1283395 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /inference="protein motif:HMMPfam:PF03483" /note="HMMPfam hit to PF03483, B3/4, score 8.4e-94" misc_feature 1283441..1283647 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /inference="protein motif:HMMPfam:PF03484" /note="HMMPfam hit to PF03484, tRNA synthetase, B5, score 7.3e-21" misc_feature 1284425..1284706 /gene="pheT" /locus_tag="CMS_1230" /old_locus_tag="CMS1230" /inference="protein motif:HMMPfam:PF03147" /note="HMMPfam hit to PF03147, Ferredoxin-fold anticodon-binding, score 1.9e-29" gene 1284829..1285878 /gene="argC" /locus_tag="CMS_1231" /old_locus_tag="CMS1231" /db_xref="GeneID:6158866" CDS 1284829..1285878 /gene="argC" /locus_tag="CMS_1231" /old_locus_tag="CMS1231" /EC_number="1.2.1.38" /note="catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="YP_001709969.1" /db_xref="GI:170781637" /db_xref="GeneID:6158866" /translation="MSFSVAVAGASGYAGGELLRLLADHPRLEVQTLTAFQNAGERLR EVHPHLTSYADRTFVETTAEQLAGHDVVFLALPHGKSGAITAELDDQTLVVDCGADHR LVDEAAWDAFYGGDFAGAWPYGLPELLHAEEGGTQRTRLSGVKRIAVPGCNVTAITLG LQPGIRAGVIEPEDVVAVLAVGPSGAGRSLRTNLLASEILGSASAYAVGGTHRHTPEI RQNLETAGGGHVSVSFTPVLVPMARGILATATARLAPGFSAHDVRAAWELAYADEPFV HLLPEGTFPNVSDVTGSNTALVGLAIDEAAGRVVTVTAIDNLVKGTAGAAIQSANIAL GLPEAMGLPVNGVAP" misc_feature 1284832..1285272 /gene="argC" /locus_tag="CMS_1231" /old_locus_tag="CMS1231" /inference="protein motif:HMMPfam:PF01118" /note="HMMPfam hit to PF01118, Semialdehyde dehydrogenase,score 1e-30" misc_feature 1285309..1285788 /gene="argC" /locus_tag="CMS_1231" /old_locus_tag="CMS1231" /inference="protein motif:HMMPfam:PF02774" /note="HMMPfam hit to PF02774, Semialdehyde dehydrogenase,score 4.9e-38" gene 1285875..1287029 /gene="argJ" /locus_tag="CMS_1232" /old_locus_tag="CMS1232" /db_xref="GeneID:6158602" CDS 1285875..1287029 /gene="argJ" /locus_tag="CMS_1232" /old_locus_tag="CMS1232" /EC_number="2.3.1.35" /note="bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein" /protein_id="YP_001709970.1" /db_xref="GI:170781638" /db_xref="GeneID:6158602" /translation="MSVTAARGFVAGGVAAGLKSTGALDVALVRNTGPSQAAAAVFTS NRCQANPILWSRQVIGDGRVSAVVLNSGGANCYTGSRGFQVTHATAEAVGRALDVSSG DVLVCSTGLIGEQLPLEKLEDGVARVAVALAEDGGDDAARAIMTTDTKPKQSVRASDA GWTVGGMAKGAGMLAPGLATMLVVITTDADLDSAALDAALRESTRVTFDRLDSDGCMS TNDQVTLLASAASGVVPDADAFQAALTAVCADLAEQLQADAEGAAHDIAIEVVHAASD ADAVEVGRAVARSNLFKAAVFGNDPNWGRVLAAVGTTGAAFDPYGIDVAINGVEVCRA GEPHESRDLVDLHPRAVHVLIDLHAGDATATILTNDLTHDYVHENSAYAS" misc_feature 1285899..1287026 /gene="argJ" /locus_tag="CMS_1232" /old_locus_tag="CMS1232" /inference="protein motif:HMMPfam:PF01960" /note="HMMPfam hit to PF01960, Arginine biosynthesis protein ArgJ, score 1.8e-157" gene 1287029..1287964 /gene="argB" /locus_tag="CMS_1233" /old_locus_tag="CMS1233" /db_xref="GeneID:6158607" CDS 1287029..1287964 /gene="argB" /locus_tag="CMS_1233" /old_locus_tag="CMS1233" /EC_number="2.7.2.8" /note="catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="YP_001709971.1" /db_xref="GI:170781639" /db_xref="GeneID:6158607" /translation="MGDADGTDVTAIAQQAADRDQAQAESKAAILIESLSWLQRFHDR IVVVKFGGNAMVDEELTRTFAEDVVYLRYAGLRPVVVHGGGPQISAMLTRLGIDSEFR GGYRVTTPEVLEVVRMVLTGQVSRDVVRGINAHGPLAAAVSGEDAGLFTGRRRGAVVD GVEVDLGLVGDVVSVDPTAVLAQLDAGRIPVVSSIAPDESDPAVSLNVNADAAAAALA VALGAEKLVILTDVAGLYRDWPDRGSLVSDIRADELRALLPSLESGMIPKMAACLEAV DGGVPKAAIIDGRIPHSMLLEIFTTNGIGTEVVPA" misc_feature 1287158..1287889 /gene="argB" /locus_tag="CMS_1233" /old_locus_tag="CMS1233" /inference="protein motif:HMMPfam:PF00696" /note="HMMPfam hit to PF00696,Aspartate/glutamate/uridylate kinase, score 2e-53" gene 1287961..1289178 /gene="argD" /locus_tag="CMS_1234" /old_locus_tag="CMS1234" /db_xref="GeneID:6158601" CDS 1287961..1289178 /gene="argD" /locus_tag="CMS_1234" /old_locus_tag="CMS1234" /EC_number="2.6.1.11" /note="catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /protein_id="YP_001709972.1" /db_xref="GI:170781640" /db_xref="GeneID:6158601" /translation="MTTTQPERRTTQTESEWSDRFQAAMMRSSPPPLAMLVRGEGCRV WDSTGREYLDFLAGIAVNSLGHAHPALIRAVTEQVSTLAHVSNYFATPPQIALAERLR RITGAGDTGRVYFGNSGAEANEAAFKLARRNGSDRRTRVITLQGSFHGRTMGALALTG QPALQTPFLPLPGGVEHIAPTLEALEAAIDDTVQALILEPIQGEAGVVDLPAGFLRRA RELTRQHGALLILDEIQTGVGRTGRWFAYEHEGVRPDAVTIAKGIAGGVPIGALVAFD AAADLLQKGQHGSTFGGNPLATAAGNAVLTEIEDAGLVENARVRGEEIRASITGLDSP LVAEVRGRGLLIGVGLHHEDGGRIAAAALGEGLIINAPNARSLRIAPPLIVGDAEVRD FRGRFARALAHLR" misc_feature 1288027..1289175 /gene="argD" /locus_tag="CMS_1234" /old_locus_tag="CMS1234" /inference="protein motif:HMMPfam:PF00202" /note="HMMPfam hit to PF00202, Aminotransferase class-III,score 1.4e-136" gene 1289326..1290249 /gene="argF" /locus_tag="CMS_1235" /old_locus_tag="CMS1235" /db_xref="GeneID:6158603" CDS 1289326..1290249 /gene="argF" /locus_tag="CMS_1235" /old_locus_tag="CMS1235" /EC_number="2.1.3.3" /note="catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="YP_001709973.1" /db_xref="GI:170781641" /db_xref="GeneID:6158603" /translation="MTRHFLRDDDLSPAEQAEVLDLAVQLKRERWSERPLAGPQTVAV IFDKSSTRTRVSFAVGIADLGGVPLVISTANSQLGGKETASDTARVLERQVAAIVWRT YAQSGLEEMAAGTTVPVVNALSDDFHPCQILADLLTIREHRGDLAGQTLVFLGDGASN MAHSYLLGGVTAGMHVRIAAPAGYVPAAVVVADAERIAATTGGSVRILADPVEAVTGA DVVITDTWVSMGREEEKAQRLAELGAYQVTTELMAHAVDDAIFLHCLPADREYEVAAE VIDGPQSVVWDEAENRLHAQKALLVWLLRQS" misc_feature 1289332..1289754 /gene="argF" /locus_tag="CMS_1235" /old_locus_tag="CMS1235" /inference="protein motif:HMMPfam:PF02729" /note="HMMPfam hit to PF02729, Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain, score 7.7e-59" misc_feature 1289461..1289484 /gene="argF" /locus_tag="CMS_1235" /old_locus_tag="CMS1235" /note="PS00097 Aspartate and ornithine carbamoyltransferases signature." misc_feature 1289761..1290237 /gene="argF" /locus_tag="CMS_1235" /old_locus_tag="CMS1235" /inference="protein motif:HMMPfam:PF00185" /note="HMMPfam hit to PF00185, Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region, score 6.4e-66" gene 1290298..1291551 /gene="argG" /locus_tag="CMS_1236" /old_locus_tag="CMS1236" /db_xref="GeneID:6158604" CDS 1290298..1291551 /gene="argG" /locus_tag="CMS_1236" /old_locus_tag="CMS1236" /EC_number="6.3.4.5" /note="catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="YP_001709974.1" /db_xref="GI:170781642" /db_xref="GeneID:6158604" /translation="MAERVVLAYSGGLDTSVGIGWLKDATGKEVVALAVDVGQGGEDM EVIRQRALDCGAVEAVVVDAKDEFADDYIVPALKANALYQKRYPLVSGLSRPLIAKHL ARVAHELGANSVAHGCTGKGNDQVRFEAAVAALAPDLTSIAPVRDLALTRDKAIVYAN EHDLPIEQSKKSPYSIDKNVWGRAVETGFLEDPWNGPIEDLYEYTQDPDVLREATEVT ITFEAGVPVAIDGIRYSPLRIVQELNAAAGAHGIGRIDVVEDRLVGIKSREVYEAPAA MTLIEAHEELEALTIERDLGRYKRGVEKDWANLVYDGLWFSGLKRSLDAFIEDSQRHV SGDIRMTLRGGRAVVTGRRSETSLYDFDLATYDTGDTFDQSLSKGFIELWSLPSKISA RRDLAVEQAALAADDATPAAAPAAE" misc_feature 1290313..1291479 /gene="argG" /locus_tag="CMS_1236" /old_locus_tag="CMS1236" /inference="protein motif:HMMPfam:PF00764" /note="HMMPfam hit to PF00764, Argininosuccinate synthase,score 5.8e-236" misc_feature 1290319..1290345 /gene="argG" /locus_tag="CMS_1236" /old_locus_tag="CMS1236" /note="PS00564 Argininosuccinate synthase signature 1." misc_feature 1290646..1290681 /gene="argG" /locus_tag="CMS_1236" /old_locus_tag="CMS1236" /note="PS00565 Argininosuccinate synthase signature 2." gene 1291556..1293037 /gene="argH" /locus_tag="CMS_1237" /old_locus_tag="CMS1237" /db_xref="GeneID:6158605" CDS 1291556..1293037 /gene="argH" /locus_tag="CMS_1237" /old_locus_tag="CMS1237" /EC_number="4.3.2.1" /note="catalyzes the formation of arginine from (N-L-arginino)succinate" /codon_start=1 /transl_table=11 /product="argininosuccinate lyase" /protein_id="YP_001709975.1" /db_xref="GI:170781643" /db_xref="GeneID:6158605" /translation="MTESTDPSSRAGEAGALWGGRFAGGPSPELVALSRSTHFDWQLA PYDIAGSRAHARALAAAGYLSDAERQAMLQALDTLEDRVRSGALVASEADEDVHGALE RGLMDIAGPDLGGKLRAGRSRNDQIATLVRMYLRDHAAVIHAMLVQLVDALAAQAEAA GGAIMPGRTHLQHAQPVLLAHHLLAHCWPLVRDLERLADWDARADVSPYGSGALAGST LGLDASAVARDLGFARSSENSIDGTAARDVVAEFAFVLAQVGIDLSRLSEEIILWNTR EFGFVTLSDSFSTGSSIMPQKKNPDIAELARGKSGRLIGNLSGLLATLKGLPLAYNRD LQEDKEPVFDSVQTLEVLLPAFTGMIATLRFDVDRMAELAPQGFSLATDVAEWLVKHR VAFRDAHEITGELVKLAESRGVGLEDLSDDDLRAVSPHLVPEVREVLSIDGSVASRDG VGGTARVRVDEQRAELVRRVAELRARADAAAERRAAASAAASA" misc_feature 1291613..1292500 /gene="argH" /locus_tag="CMS_1237" /old_locus_tag="CMS1237" /inference="protein motif:HMMPfam:PF00206" /note="HMMPfam hit to PF00206, Fumarate lyase, score 2.1e-62" misc_feature 1292423..1292452 /gene="argH" /locus_tag="CMS_1237" /old_locus_tag="CMS1237" /note="PS00163 Fumarate lyases signature." misc_feature 1292462..1292485 /gene="argH" /locus_tag="CMS_1237" /old_locus_tag="CMS1237" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1293034..1293171 /locus_tag="CMS_1238" /old_locus_tag="CMS1238" /db_xref="GeneID:6158606" CDS 1293034..1293171 /locus_tag="CMS_1238" /old_locus_tag="CMS1238" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709976.1" /db_xref="GI:170781644" /db_xref="GeneID:6158606" /translation="MTLSNGRRPERPEPRHRWLLPLVIGVAVAVLVFVVVVASLNGEL I" sig_peptide 1293034..1293150 /locus_tag="CMS_1238" /old_locus_tag="CMS1238" /note="Signal peptide predicted for CMS1238 by SignalP 2.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.389 between residues 39 and 40" misc_feature 1293091..1293159 /locus_tag="CMS_1238" /old_locus_tag="CMS1238" /note="1 probable transmembrane helix predicted for CMS1238 by TMHMM2.0 at aa 20-42" gene 1293179..1293793 /locus_tag="CMS_1239" /old_locus_tag="CMS1239" /db_xref="GeneID:6157106" CDS 1293179..1293793 /locus_tag="CMS_1239" /old_locus_tag="CMS1239" /EC_number="3.2.2.-" /note="responsible for recognizing base lesions in the genome and initiating base excision DNA repair" /codon_start=1 /transl_table=11 /product="3-methyladenine DNA glycosylase" /protein_id="YP_001709977.1" /db_xref="GI:170781645" /db_xref="GeneID:6157106" /translation="MIDAAFFARDAVEVAPALLGAILSRDSEEGRVAVRLTEVEAYRG VGEDPGSHAFRGKRARNATMFGPPAHLYAYFTYGMHTCANIVCGPEGTSAGVLLRAGE IVEGADLARSRRGAAVRDRDLARGPARLAVALGIPLADDGAALDAPPYRLVLPDEPLA LPAAGPRAGVSGPGGSGELFPWRFWVPGDPTVSPYRAHVPRVRR" misc_feature 1293185..1293751 /locus_tag="CMS_1239" /old_locus_tag="CMS1239" /inference="protein motif:HMMPfam:PF02245" /note="HMMPfam hit to PF02245, Methylpurine-DNA glycosylase (MPG), score 1.6e-60" gene complement(1293812..1294411) /locus_tag="CMS_1240" /old_locus_tag="CMS1240" /db_xref="GeneID:6157107" CDS complement(1293812..1294411) /locus_tag="CMS_1240" /old_locus_tag="CMS1240" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001709978.1" /db_xref="GI:170781646" /db_xref="GeneID:6157107" /translation="MIPAGTPAEVAAWVILCVLATAALVLALLTARAPRTGLVAGAAA ALAAAVVLGLALRGVASPLVVGYLGLVAVVLAVLGGGSASTVVLALATRGSVPPGAYG GILVAPRGHEDDPSALRRPTREVLRGGATIGMLERLAVVAVILAGYPEALAVVIAIKG VGRFSELGEAAEARERFIIGTLVSWLWAATCAAVVLVVR" sig_peptide complement(1293812..1293952) /locus_tag="CMS_1240" /old_locus_tag="CMS1240" /note="Signal peptide predicted for CMS1240 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.530 between residues 47 and 48" misc_feature complement(order(1293818..1293886,1293929..1293997, 1294142..1294210,1294238..1294306,1294325..1294384)) /locus_tag="CMS_1240" /old_locus_tag="CMS1240" /note="5 probable transmembrane helices predicted for CMS1240 by TMHMM2.0 at aa 10-29, 36-58, 68-90, 139-161 and 176-198" gene complement(1294408..1295079) /locus_tag="CMS_1241" /old_locus_tag="CMS1241" /db_xref="GeneID:6157108" CDS complement(1294408..1295079) /locus_tag="CMS_1241" /old_locus_tag="CMS1241" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001709979.1" /db_xref="GI:170781647" /db_xref="GeneID:6157108" /translation="MFVITADQKASRHDIDRAGTGRDDLAARYEGRLVLPVDRTSGDE VQALVADAATALDMVLMLTRAGHWSVGLGIGTVRIPLPRATREATGPAFIAARDAVTA AKRSATRFALAVDPPIARSGDGDAPELPGAAEVEALITLLLLARDRRTPQGWDVVDRM AGGGTQREVAAELGVTPQAVSTRLRTSGWRAERAAIPGLEALLAHLDAGASHAPRAAR EGGRS" misc_feature complement(1294525..1294590) /locus_tag="CMS_1241" /old_locus_tag="CMS1241" /note="Predicted helix-turn-helix motif with score 2002.000, SD 6.01 at aa 164-185, sequence GTQREVAAELGVTPQAVSTRLR" gene 1295298..1296626 /gene="tyrS" /locus_tag="CMS_1242" /old_locus_tag="CMS1242" /db_xref="GeneID:6157109" CDS 1295298..1296626 /gene="tyrS" /locus_tag="CMS_1242" /old_locus_tag="CMS1242" /EC_number="6.1.1.1" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="YP_001709980.1" /db_xref="GI:170781648" /db_xref="GeneID:6157109" /translation="MPRWYRDRVTNADPDRLSSQRNDPSFEDVWEEIVWRGYVHVSTD QDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLVLMRRLQLAGHRPLGLVGGSTGLI GDPRPTAERTLNTPEVVAEWVGRLQAQVSAFLSPEGDNAVRIVNNLDWTAPLSAIDFL REVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQGLDFRELHRAYGCVLQTGG SDQWGNLTSGTDLIRRSERATAHAIGTPLITNSDGTKFGKSEGNAVWLDPELTSPYAF YQFWLNTDDGDVIHRLRVFTFLDRARIEELERAVASEPFRREAQRTLAWEVTSLVHGV EATESAIAAAQALFGQGELAALDEGTLEAVIRELPTAELAPGTTVIQALVDTGLVSSA GEARRAITQGGVYVNNAAVTDAAAVVDELLHGRYAVLRRGKKTLAGVTVG" misc_feature 1295451..1296344 /gene="tyrS" /locus_tag="CMS_1242" /old_locus_tag="CMS1242" /inference="protein motif:HMMPfam:PF00579" /note="HMMPfam hit to PF00579, Aminoacyl-tRNA synthetase,class Ib, score 3.3e-98" misc_feature 1295490..1295522 /gene="tyrS" /locus_tag="CMS_1242" /old_locus_tag="CMS1242" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." misc_feature 1296426..1296560 /gene="tyrS" /locus_tag="CMS_1242" /old_locus_tag="CMS1242" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 0.0064" gene 1297189..1298706 /locus_tag="CMS_r001" /old_locus_tag="CMSr001" /db_xref="GeneID:6159083" rRNA 1297189..1298706 /locus_tag="CMS_r001" /old_locus_tag="CMSr001" /product="16S ribosomal RNA" /db_xref="GeneID:6159083" gene 1299153..1302198 /locus_tag="CMS_r002" /old_locus_tag="CMSr002" /db_xref="GeneID:6159108" rRNA 1299153..1302198 /locus_tag="CMS_r002" /old_locus_tag="CMSr002" /product="23S ribosomal RNA" /db_xref="GeneID:6159108" gene 1302368..1302483 /locus_tag="CMS_r003" /old_locus_tag="CMSr003" /db_xref="GeneID:6159109" rRNA 1302368..1302483 /locus_tag="CMS_r003" /old_locus_tag="CMSr003" /product="5S ribosomal RNA" /db_xref="GeneID:6159109" gene 1303366..1304664 /locus_tag="CMS_1243" /old_locus_tag="CMS1243" /db_xref="GeneID:6159110" CDS 1303366..1304664 /locus_tag="CMS_1243" /old_locus_tag="CMS1243" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709981.1" /db_xref="GI:170781649" /db_xref="GeneID:6159110" /translation="MALPARDGERKPWSKDGGRDSGGRDAGRGGARPPRDGDKLWTRD GRPARNDRDAPRYEEALTEEQLRARELRSVRPRHEDPEIPEDVKPGDLDRIARNELKT LSKDNAEGVAQHLVMAARLIDEDPELAHRHATSAARRAGRIAVVRESLAITAYAVGDY ALALRELRTYRRISGKNDQLALMVDSERGQGRPDKALELGRSVPKETLPAAEQVALAI AMSGARLDLGQTEAALDELSIAQLNRDVAYSYSADLFHAYAEVLEELGRSDEADAWRQ RADAAESAFADPDEGWDDMVEVVEEELEVEDSGDVDVAGEEVLSGEEVLSGEEVLSGE EVLSGEDDGSVEADGDDERAADAGVAADGAATASEDPGEGDEPSLPSEDGDSSDIAID VDDELDVEERDRGADEAAPVDMTDGALGADDAREGDRDVR" gene 1304654..1305694 /locus_tag="CMS_1244" /old_locus_tag="CMS1244" /db_xref="GeneID:6157110" CDS 1304654..1305694 /locus_tag="CMS_1244" /old_locus_tag="CMS1244" /note="HMMPfam:PF00702;Haloacid dehalogenase-like hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709982.1" /db_xref="GI:170781650" /db_xref="GeneID:6157110" /translation="MFARAAKGSAPLDGVDVILADLDGVVYAGPDSIPHAVDALNRAA GDGIRLGYITNNASRTDASVAEHLSSLGLTVAPEDVVTSPQAALRLLADRVPAGSIVL VVGGEGLVHELEKAGYVVTRSTDDQPAAVVQGFSPEVGWAQLAEAAFALADPDVVWVA TNTDWTIPVARGIAPGNGTLVSAVHTAVGRLPVVAGKPETPIFDVARERFGAERPVFL GDRLDTDILGATRAGMASVHVLTGIDRAKQLLAAEEDQRPTFILEHLGQLHEPYPETR FSQEGRVATVGKSSVRIAGDRVEVVKDGGSTIDTLRAACAVIWNSGRPIYGLDVQESL YVAAGAAGAGRA" misc_feature 1304696..1305379 /locus_tag="CMS_1244" /old_locus_tag="CMS1244" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 3.4e-16" gene 1305704..1305931 /locus_tag="CMS_1245" /old_locus_tag="CMS1245" /db_xref="GeneID:6157111" CDS 1305704..1305931 /locus_tag="CMS_1245" /old_locus_tag="CMS1245" /codon_start=1 /transl_table=11 /product="hypthetical protein" /protein_id="YP_001709983.1" /db_xref="GI:170781651" /db_xref="GeneID:6157111" /translation="MSDDPEDGARAASAAGAAPEGDRDDHDDRDVAEELVSRLQLIEE QPLGDRAAAFALLHDELRTRLEGGDGAAARG" gene 1305924..1306796 /locus_tag="CMS_1246" /old_locus_tag="CMS1246" /db_xref="GeneID:6157112" CDS 1305924..1306796 /locus_tag="CMS_1246" /old_locus_tag="CMS1246" /note="low similarity to PF01728;Ribosomal RNA methyltransferase RrmJ/FtsJ, none to hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709984.1" /db_xref="GI:170781652" /db_xref="GeneID:6157112" /translation="MADAGDGSASLPAEAPAELLGGDLRLDAALPALGLARSRTHAAR LIVDGLVTVDGRGVVKASFRVMPGSVVEVAGTDAYVSRGAHKLIGALDAFPEVEVAGR LALDVGASTGGFTQVLLERGARRVIALDVGHGQLDPLIREDPRVDVVEGFNVRDLTPE SLAGVTPDDLAGEAPALVVGDLSFISLGLVLPAIARTAADGADVVLLIKPQFEVGRTG IREGIVHDAGLRDDAVMRVLWAAWDLGLGTAGLVSSPIVGGAGNHEYLAWFSGRAGCN PTQWRSTSNEITGA" misc_feature 1305993..1306136 /locus_tag="CMS_1246" /old_locus_tag="CMS1246" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 3e-10" misc_feature 1306158..1306736 /locus_tag="CMS_1246" /old_locus_tag="CMS1246" /inference="protein motif:HMMPfam:PF01728" /note="HMMPfam hit to PF01728, Ribosomal RNA methyltransferase RrmJ/FtsJ, score 2.1e-05" gene 1306793..1307719 /gene="ppnK" /locus_tag="CMS_1247" /old_locus_tag="CMS1247" /db_xref="GeneID:6157113" CDS 1306793..1307719 /gene="ppnK" /locus_tag="CMS_1247" /old_locus_tag="CMS1247" /EC_number="2.7.1.23" /note="catalyzes the phosphorylation of NAD to NADP" /codon_start=1 /transl_table=11 /product="inorganic polyphosphate/ATP-NAD kinase" /protein_id="YP_001709985.1" /db_xref="GI:170781653" /db_xref="GeneID:6157113" /translation="MSEVAGPARHILVVSHTGRRDSIDAALSVCAQLAEADVQLVLTA EEKADILPFAPEMDRVAVLGEDVQTADLEIVIVLGGDGTILRSAEIVRGTSVPLLGVN LGHVGFLAESEREDLTATVRRVLDRDYTVEERMTLDVTLKVGAEIVYRTWALNEATVE KASRERMLEVVVEIDGRPLASYGCDGMVVSTPTGSTAYAFSAGGPIVWPSLEAMLVVP LSPHTLFARSLVVGPESTVAVEVLSRTSGSGVLWCDGRRTRDMPPGARVETRRSAIPV RLARLKQSPFTDRLVNKFELPVTGWRGPVDRD" misc_feature 1306820..1307638 /gene="ppnK" /locus_tag="CMS_1247" /old_locus_tag="CMS1247" /inference="protein motif:HMMPfam:PF01513" /note="HMMPfam hit to PF01513, ATP-NAD/AcoX kinase, score 2e-73" gene 1307712..1309427 /gene="recN" /locus_tag="CMS_1248" /old_locus_tag="CMS1248" /db_xref="GeneID:6158876" CDS 1307712..1309427 /gene="recN" /locus_tag="CMS_1248" /old_locus_tag="CMS1248" /codon_start=1 /transl_table=11 /product="putative DNA repair protein RecN" /protein_id="YP_001709986.1" /db_xref="GI:170781654" /db_xref="GeneID:6158876" /translation="MIEEITIRDLGVIGQATLPLGPGFTAVTGETGAGKTMVVTSLGL LLGARADSGAVRQGSERAVVEGRWIIAADGPVPERVRDAGGDVDPFGDGTRGELIVTR QLSSEGRSRASVGGRGAPAALLTEIGEQLVVVHGQSDQMRLRSSTAQRQALDRFAGSA LVPVLGEYQEVFRRWQAARAELDRLVTEQDARTREAEELRAAIDAIEAVAPQPGEDEE LRERIDRLTNLEDLRAAASAAHELMSSEDASGEMADAASVLDTAHRRLDRVAAHDPGL ADIIESLDSARILVSEIAVQLSGYLAGLDADGARELETLQDRRAELAALTRAHGPTVE DALAFLDTGSARLLELDGDTDRIDLLRVEVERDEALVGELAERVTAVRTEAGERLAAA VTTELGALAMADASLDVRVSPREEPALSGADRVEILLRPHAGAEARPLGRGASGGELS RVMLAIEVVVAGDDPVPTFVFDEVDAGVGGAAAIEIGRRLARLAERAQVIVVTHLAQV AAFSTNHLRVVKGGDGQVTASSVTQLEGDARIQEMARLLSGLPDSESGLAHARELVET AASLR" misc_feature 1307796..1307819 /gene="recN" /locus_tag="CMS_1248" /old_locus_tag="CMS1248" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1309501..1311243 /gene="pyrG" /locus_tag="CMS_1249" /old_locus_tag="CMS1249" /db_xref="GeneID:6158923" CDS 1309501..1311243 /gene="pyrG" /locus_tag="CMS_1249" /old_locus_tag="CMS1249" /EC_number="6.3.4.2" /note="CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="YP_001709987.1" /db_xref="GI:170781655" /db_xref="GeneID:6158923" /translation="MADINSADTDSGTTDSITSTTGAAKTTRHIFVTGGVVSSLGKGL TAASLGNLLTARGVRVVMQKLDPYLNVDPGTMNPFQHGEVFVTDDGAETDLDIGHYER FLDIELDQAANVTTGQIYSEVIAKERRGEYLGDTVQVIPHITDEIKRRMRLQASDEPQ PDVIITEIGGTVGDIESQPFIEAARQVRHELGRNNVFFVHVSLVPYMGASGEQKTKPT QHSVAALRSIGIQPDALVLRSDRPVSDSNKKKIALMCDVDEQAVVNAVDVPSIYDIPE MLHGQGLDSYIIDHLGLPAADAVDWSGWSDLLDAVHDPKHEVTVGLVGKYIDLPDAYL SVTEALRAGGFAHSARVKLRWVASDECETPEGAAKRLGDLDALCVPGGFGIRGIEGKL GALKFARDNKIPVLGLCLGLQCMVIEYARNEADLAGASSSEFDPESEFPVVATMAEQV DIIAGGDLGGTMRLGLYEAKLAEGSLAAELYGAPVSHERHRHRYEVNNQYRERIQDAG LVFSGTSPDGTLVEYVELPREVHPFYIGTQAHPELRSRPNRAHPLFAGLVRAALDRQA ASTLFVEDDAEAVA" misc_feature 1309579..1310418 /gene="pyrG" /locus_tag="CMS_1249" /old_locus_tag="CMS1249" /inference="protein motif:HMMPfam:PF06418" /note="HMMPfam hit to PF06418, CTP synthase, score 2.4e-208" misc_feature 1310482..1311180 /gene="pyrG" /locus_tag="CMS_1249" /old_locus_tag="CMS1249" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 2.9e-54" misc_feature 1310710..1310745 /gene="pyrG" /locus_tag="CMS_1249" /old_locus_tag="CMS1249" /note="PS00442 Glutamine amidotransferases class-I active site." gene 1311240..1311941 /locus_tag="CMS_1250" /old_locus_tag="CMS1250" /db_xref="GeneID:6158912" CDS 1311240..1311941 /locus_tag="CMS_1250" /old_locus_tag="CMS1250" /codon_start=1 /transl_table=11 /product="putative nudix hydrolase" /protein_id="YP_001709988.1" /db_xref="GI:170781656" /db_xref="GeneID:6158912" /translation="MTDAVVGSPADSLHDDAVSYDVTSSERVFQGRIWDIRRETFAYG DGEITREYVDHTGAVAVLAIDDEDRVLLIKQYRHPVRMREWEIPAGLLDITGEPPLTA VQRELAEEADLLAAEWSVLAEYYTTPGGSDEAIRVYLARGLTPTAEAFARTDEEADIE VRWVDLDEVVTAVLERRIQNPSTVIAVLQAHVARSRGWQTLGPADAPWPRHPKLRDGD GDGDGDRDGGGASGS" misc_feature 1311402..1311812 /locus_tag="CMS_1250" /old_locus_tag="CMS1250" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 7.2e-19" gene 1311938..1312924 /gene="xerD" /locus_tag="CMS_1251" /old_locus_tag="CMS1251" /db_xref="GeneID:6157114" CDS 1311938..1312924 /gene="xerD" /locus_tag="CMS_1251" /old_locus_tag="CMS1251" /note="site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs" /codon_start=1 /transl_table=11 /product="site-specific tyrosine recombinase XerD" /protein_id="YP_001709989.1" /db_xref="GI:170781657" /db_xref="GeneID:6157114" /translation="MTDAADGPGGAAPDTAPEVPVALRRAVDRWLRHVEVERGLSRNT IQAYRRDLARYTAHLAAEGVADPADATSAHVAGFAQRVRDPEQGGLTASSLARMLSSV RSFHRFLVEEGIVEVDVSAEQKPPKLPSRLPKAVSVETMGRILDATDGDEPLRVRDKA LLELLYATGARVSEITALTVDDVLGPDGAAAEIVRVVGKGGKQRIVPVGSFARRAVDA YLVRVRPILAARGSATPALFLGLRGHALSRQNAWLVIKAAAERAGVTEEISPHIFRHS FATHLIAGGADVRVVQELLGHSSVATTQIYTRVTVDTLRDVYTTAHPRARRA" misc_feature 1312016..1312279 /gene="xerD" /locus_tag="CMS_1251" /old_locus_tag="CMS1251" /inference="protein motif:HMMPfam:PF02899" /note="HMMPfam hit to PF02899, Phage integrase, N-terminal SAM-like, score 1.6e-25" misc_feature 1312343..1312885 /gene="xerD" /locus_tag="CMS_1251" /old_locus_tag="CMS1251" /inference="protein motif:HMMPfam:PF00589" /note="HMMPfam hit to PF00589, Phage integrase, score 9.6e-45" misc_feature 1312694..1312759 /gene="xerD" /locus_tag="CMS_1251" /old_locus_tag="CMS1251" /note="Predicted helix-turn-helix motif with score 1136.000, SD 3.06 at aa 253-274, sequence LVIKAAAERAGVTEEISPHIFR" gene 1312997..1313881 /gene="parA" /locus_tag="CMS_1252" /old_locus_tag="CMS1252" /db_xref="GeneID:6157115" CDS 1312997..1313881 /gene="parA" /locus_tag="CMS_1252" /old_locus_tag="CMS1252" /codon_start=1 /transl_table=11 /product="putative chromosome partitioning protein" /protein_id="YP_001709990.1" /db_xref="GI:170781658" /db_xref="GeneID:6157115" /translation="MTRKPDVTELPGMDVPVLGPTGRELREFAEPEPLAGHGPAKIIS LCNQKGGVGKTTTAINLGASLASYGRRVLAVDFDPQGALSAGLGVQTHDAVTIYDLLL GTVKDPREAIQTTGFEGLDVIPANIDLSAAEVHLVNEVAREQILASVLRKVSADYDVI LIDCQPSLGLLTVNALTASHGVLIPLECEFFALRGVALLVETIEKVKDRLNPGLALDG ILATMYDSRTLHSREVLQRVVEAFDDSVLETVIGRTVKFPDASVAGKPIIQFAPEHPA ALAYRKVARELIARGAVA" misc_feature 1313123..1313773 /gene="parA" /locus_tag="CMS_1252" /old_locus_tag="CMS1252" /inference="protein motif:HMMPfam:PF01656" /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide synthase, score 1.1e-51" gene 1313865..1314731 /locus_tag="CMS_1253" /old_locus_tag="CMS1253" /db_xref="GeneID:6158848" CDS 1313865..1314731 /locus_tag="CMS_1253" /old_locus_tag="CMS1253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709991.1" /db_xref="GI:170781659" /db_xref="GeneID:6158848" /translation="MAPSRRGAPLAEPELAVDADAAALRADPERAFRVSIGNFEGPFD LLLSLIGRHEMDITEVSLSLVTNEFIAHIRGLDGPEDLDEASSFLVVAATLLDLKLVG LLPQGELVDAEDVALLEARDLLFARLLQYRAFKQAASWFQERLVAESGRAFRDVPLEE RFRAQVPELVWTTSPADLAAIALLALAPREIPTVGLDHLHAPLVSIREQAAVVVARLR GGAPVTFRELVADAGVTGVVIARFLAVLELYRVAAIEFDQPEALGELTLTWTAESWSD DALASLGAGYDS" misc_feature 1314009..1314674 /locus_tag="CMS_1253" /old_locus_tag="CMS1253" /inference="protein motif:HMMPfam:PF02616" /note="HMMPfam hit to PF02616, Protein of unknown function DUF173, score 6.9e-28" gene 1314721..1315332 /locus_tag="CMS_1254" /old_locus_tag="CMS1254" /db_xref="GeneID:6157116" CDS 1314721..1315332 /locus_tag="CMS_1254" /old_locus_tag="CMS1254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001709992.1" /db_xref="GI:170781660" /db_xref="GeneID:6157116" /translation="MTAEPQDPTGDTAVPDADTPLDLDRALEALLMVADEPQSVTTLA TATSTPVKEVRRAIQRLVDDFDGKTGGVRRGFELREVGGGWRVYVRPEYDTVIRDHVL TQNPTRLSQAALETLAVIAYKQPISRSQVAAIRAVNVDSVVRTLLARGLVTEAFTAEE TGAIHYGTTDHLLTQLGINSLDELPPISPLLPDGAEGFHDPLH" misc_feature 1314793..1315281 /locus_tag="CMS_1254" /old_locus_tag="CMS1254" /inference="protein motif:HMMPfam:PF04079" /note="HMMPfam hit to PF04079, Conserved hypothetical protein 281, score 1.1e-52" gene 1315316..1316191 /gene="rsuA" /locus_tag="CMS_1255" /old_locus_tag="CMS1255" /db_xref="GeneID:6157117" CDS 1315316..1316191 /gene="rsuA" /locus_tag="CMS_1255" /old_locus_tag="CMS1255" /EC_number="4.2.1.70" /codon_start=1 /transl_table=11 /product="putative RNA pseudouridine synthase" /protein_id="YP_001709993.1" /db_xref="GI:170781661" /db_xref="GeneID:6157117" /translation="MTPSTEPDDRASAHAWNPDEPVAGVRLQKVMAAAGVASRRVCED MIAAGRVTVNGETVTEPGRRIDPDVDEVAVDDQAVQLDTSKRYLMLNKPVGIYSSLRD ERGRPDLREFTEEFEERLFNVGRLDAETSGLLILTNDGDLAHVLAHPSFGVLKTYIAK VTGRVTPQTIQRLTQGVDLEDGPIQADRARILSGGGDQTLVEITLHSGRNRIVRRMLD EVGHPVEELVRRQFGPLHLGSLGVGRVRDLTSDELGQLLTISREARAQAGPANPQGAG AAAEAQGDVDREDGE" misc_feature 1315388..1315528 /gene="rsuA" /locus_tag="CMS_1255" /old_locus_tag="CMS1255" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 1.8e-11" misc_feature 1315571..1315972 /gene="rsuA" /locus_tag="CMS_1255" /old_locus_tag="CMS1255" /inference="protein motif:HMMPfam:PF00849" /note="HMMPfam hit to PF00849, Pseudouridine synthase,score 1e-19" misc_feature 1315685..1315729 /gene="rsuA" /locus_tag="CMS_1255" /old_locus_tag="CMS1255" /note="PS01149 Rsu family of pseudouridine synthase signature." gene 1316188..1317306 /locus_tag="CMS_1256" /old_locus_tag="CMS1256" /db_xref="GeneID:6158972" CDS 1316188..1317306 /locus_tag="CMS_1256" /old_locus_tag="CMS1256" /note="catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate" /codon_start=1 /transl_table=11 /product="prephenate dehydrogenase" /protein_id="YP_001709994.1" /db_xref="GI:170781662" /db_xref="GeneID:6158972" /translation="MSEAAGAAAATDTRVQGTVRIVGTGLLGTSIALGLRARGVDVVL ADASPTTLRLAADMGAGRIADISSAPDRPALVVVCVPPDVTARVVAAELAAHPDALVT DVASVKAAPLAELRAMGADLSSYLGSHPLAGRERGGPVSATGDLFLGRPWVIAGHDGI TYSAGAPVEQLILDLGAVPIEMTAEEHDASVALVSHVPQVVASLLASRLADGDASALG LSGQGLRDTTRIASSDAALWVQILGANASRIVPILKALRTDLDEVIDALDDVDAQGAR LRVAERIHAGNAGVARIPGKHGQDRRFAAVTVMIDDRPGQLAALICDVGAADVSIEDL RLEHSQGAQVGLVEIAVLPEARDRLVARLEERDWRIAG" misc_feature 1316314..1317057 /locus_tag="CMS_1256" /old_locus_tag="CMS1256" /inference="protein motif:HMMPfam:PF02153" /note="HMMPfam hit to PF02153, Prephenate dehydrogenase,score 1.8e-34" gene 1317435..1318046 /gene="cmk" /locus_tag="CMS_1257" /old_locus_tag="CMS1257" /db_xref="GeneID:6157118" CDS 1317435..1318046 /gene="cmk" /locus_tag="CMS_1257" /old_locus_tag="CMS1257" /EC_number="2.7.4.14" /codon_start=1 /transl_table=11 /product="putative cytidylate kinase" /protein_id="YP_001709995.1" /db_xref="GI:170781663" /db_xref="GeneID:6157118" /translation="MSRAAARALGFDYQDTGAAYRALSWFALESGVDTEDPATVTSLI EGFDYDIAIDPDETRVSVRGTDVTEAIREPRVSAVVSRVARVPEVRHYMVELFRALMA SSDKPGIVVEGRDITTVVAPDAQVRILLTASPEARMSRRSAETSTQSAAAVGESLASR DRADSQVVDFMNAADGVTTIDSTHIDFDQTVQAVVDLVHARTD" misc_feature 1317555..1318022 /gene="cmk" /locus_tag="CMS_1257" /old_locus_tag="CMS1257" /inference="protein motif:HMMPfam:PF02224" /note="HMMPfam hit to PF02224, Cytidylate kinase, score 8.8e-27" gene 1318087..1319595 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /db_xref="GeneID:6158637" CDS 1318087..1319595 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /note="synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngA" /protein_id="YP_001709996.1" /db_xref="GI:170781664" /db_xref="GeneID:6158637" /translation="MADHDDDFPELDSALTERLSSIDEELAAQRAQTLRAGLDDYDLD DEDLEVLEAATDDPDQVTYLPALPVLAVVGRPNVGKSALINRILGRREAVVEDTPGVT RDRVSYKAEYAGRWFTLVDTGGWEPDAKGINASVAMQAEIAMDLADAVLFVVDANVGA TSTDEHVVRLLRKTKKTVILAANKVDDARQEPNAASLWSLGLGEPHPVSALHGRGVAD LLDLVLKTLPLVSKVAKEEVGGPRRVAILGRPNVGKSSLLNKAAGEERVVVNELAGTT RDPVDEQVEIADKVWRFVDTAGIRRRMHLAQGADFYASLRTSAALEKAEVAVVMIDVS EVISEQDIRIIELVLESGRALVLAFNKWDLLDDERRRYLEREIETDLAHVSWAPRVNI SARTGRHMEKLVPALETALESWDTRIATGKFNAFLAELTAAHPHPVRGGKQPRILFGT QASSRPPTFVLFTTGYLDPQYRRYIQRRLREIYGFEGSPIIVNMRVREKRKR" misc_feature 1318288..1318644 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 1.1e-39" misc_feature 1318306..1318329 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1318810..1319175 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 1.2e-37" misc_feature 1318828..1318851 /gene="engA" /locus_tag="CMS_1258" /old_locus_tag="CMS1258" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1319606..1320568) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /db_xref="GeneID:6157119" CDS complement(1319606..1320568) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /note="N/C pat1" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001709997.1" /db_xref="GI:170781665" /db_xref="GeneID:6157119" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1319618..1320160) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(1320245..1320310) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(1320310..1320431) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(1320431..1320496) /locus_tag="CMS_1259" /old_locus_tag="CMS1259" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(1320739..1321722) /locus_tag="CMS_1260" /old_locus_tag="CMS1260" /db_xref="GeneID:6157120" CDS complement(1320739..1321722) /locus_tag="CMS_1260" /old_locus_tag="CMS1260" /note="possible serine protease with a serine active site" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001709998.1" /db_xref="GI:170781666" /db_xref="GeneID:6157120" /translation="MLQAVQPALPDDVQLLDFASPAAPACGLHRPVIEQAPMRRLPLL TRASIGRVIDGLRRVLPSVQLRFALATLAGAALLLPLGATPASAVDAVRLQAPVMAGS QIRNSDGSFCTAGPVLDYHSVASYVLPAQRATRYVLTAKHCNPLHAAVLLGSGVAGRV DWVSDQHDVELITVAPLAQRRQICSYTSYGPYCHVIVAYEPRAVGSVLAPAPYSRDYR PMVTPVRGVGSPTPREQFCTSGRTTGIICGFVPGQLPRTWFVSDPILHTGDIAGPNIF DGDSGGPVMSVDGKIYGTIVGYGRYAGVDKMTYLPFAVIQQQLPSYGLAPA" misc_feature complement(1320868..1320903) /locus_tag="CMS_1260" /old_locus_tag="CMS1260" /note="PS00135 Serine proteases, trypsin family, serine active site." gene complement(1321819..1323216) /locus_tag="CMS_1261" /old_locus_tag="CMS1261" /db_xref="GeneID:6157121" CDS complement(1321819..1323216) /locus_tag="CMS_1261" /old_locus_tag="CMS1261" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001709999.1" /db_xref="GI:170781667" /db_xref="GeneID:6157121" /translation="MSRTLPWPHREARHRSRPFTRGQDMTLIDREPRPASGSPAPAHG TTDAKTNRPRPAPLGDAPVDRWKGAPHPTTPAAWIARAREVADILAVDQVERDRAGAS PHQEVALLKHAGLVTLLGPAEHGGGGQTWDTAYKVIRAVARGDGSIGQLLGYHYLWAW AARLVGTDAQIEAVEKLATTGNLLFGGAVNPRDSDLVIHEDGDDLIFSGRKSFSTGGV VSDLTVLEGVLAGTETHVFAIVPTDQPGIVFGHDWDSLGQRLTESGSVEIRDVRVPWT DAAGFVDKVFHPLVYGTLNVPAIQLVFANFYQGIAEGALETAAAYTRSTTRAWPYGGD DKERATDEWYVLEGYGQLQSKVWASEALLDRVGAEISALLHAPREKLTERARGEVAVR VAAAKARIVEDGLEVGTRVFELTGARASASSVGLDVFWRNLRTHSLHDPVAYKRREVG RHVLLGEIPEPTWYT" gene complement(1323343..1324116) /locus_tag="CMS_1262" /old_locus_tag="CMS1262" /db_xref="GeneID:6157122" CDS complement(1323343..1324116) /locus_tag="CMS_1262" /old_locus_tag="CMS1262" /note="possible serine protease, contains both a serine and a histidine active site, probably secreted" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001710000.1" /db_xref="GI:170781668" /db_xref="GeneID:6157122" /translation="MTALAAAALVLTTGAAPASAVSPLRLATPVMAGSQIRNASGYKC TAGAVLKYDRWTTYFNSWEGATRYVVTAAHCGDLNENVTLGSSVPGKVIWRDELHDLE LIVVSPSTERAAVCSHTSAGEYCRIVLTYHPQAVGRIITRDDNTWREQRTPLVATGEP DDRVFCVSAIRAGVACGLVRTTTPAAIAAVHPGIRAAEDRSLDVQPGDSGGPVMSRSG TLYGFVSGGGIYGGVRKIDYMPWSVFAHLQPNYVLAPAG" sig_peptide complement(1323343..1323438) /locus_tag="CMS_1262" /old_locus_tag="CMS1262" /note="Signal peptide predicted for CMS1262 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.406 between residues 32 and 33" misc_feature complement(1323475..1323510) /locus_tag="CMS_1262" /old_locus_tag="CMS1262" /note="PS00135 Serine proteases, trypsin family, serine active site." misc_feature complement(1323892..1323909) /locus_tag="CMS_1262" /old_locus_tag="CMS1262" /note="PS00134 Serine proteases, trypsin family, histidine active site." gene 1324473..1325012 /locus_tag="CMS_1263" /old_locus_tag="CMS1263" /db_xref="GeneID:6157123" CDS 1324473..1325012 /locus_tag="CMS_1263" /old_locus_tag="CMS1263" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710001.1" /db_xref="GI:170781669" /db_xref="GeneID:6157123" /translation="MDQLLSRLDRIAAGRQAGHVIAEDMRDHPFTARAFRWIRWILVA ETIVGATAVAIALTLASDGIAVAPAVWFRSFVVLAMTLTLYYFAWRASAGYWWAYSRL RLFSQIFPIVTLVIAAIPGLYPLWMVIEQIVFSLLLIGVADILRSDHMREAFPKPVRA PRGAAAGSSSARSSGGATA" misc_feature order(1324581..1324649,1324677..1324745,1324782..1324850) /locus_tag="CMS_1263" /old_locus_tag="CMS1263" /note="3 probable transmembrane helices predicted for CMS1263 by TMHMM2.0 at aa 87-109, 119-141 and 154-176" gene 1325096..1325169 /locus_tag="CMS_r022" /old_locus_tag="CMSr022" /db_xref="GeneID:6157124" tRNA 1325096..1325169 /locus_tag="CMS_r022" /old_locus_tag="CMSr022" /product="tRNA-Pro" /note="codon recognized: CCC; tRNA Pro anticodon GGG, Cove score 62.54" /anticodon=(pos:1325130..1325132,aa:Pro) /db_xref="GeneID:6157124" gene 1325455..1326645 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /db_xref="GeneID:6159056" CDS 1325455..1326645 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710002.1" /db_xref="GI:170781670" /db_xref="GeneID:6159056" /translation="MGRRFPSMSTTTFVPARLKMARAIRQMTATALAAEAGTTPPWVS QAERSKDTPSPELIREFARVLNLPIEFFYRPLKHLPPSDAFHFRATSRLAKKDEDMAR ALSALAMELSDWIEDTYRAPEPAVPEVQDLIGSDDEVAPEQAAEALRGAWGLGVAPIK NLLQLLESKGAKIYSAGGPLQAIDAFSFRHAATPVIFLNVHKSAERLRFDLAHELGHL VMHGGSLHVEPGKEKELAANDFASAFLMPRSDVLGSIRGNLMLEDVLVLKRRWRVSAM ALNLRAHRLGVISEWTYSTLAKQLSIAGFRRGEPGSDLRVESSSLLTQVMSDMRARGD GFSDIARVLNVRAQDVQDLMLGIVTFAIQGEGMRAVRSTADLREASVAPVTDLSRHRG AHRG" sig_peptide 1325455..1325598 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /note="Signal peptide predicted for CMS1264 by SignalP 2.0 HMM (Signal peptide probability 0.887) with cleavage site probability 0.251 between residues 48 and 49" misc_feature 1325506..1325670 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 1.7e-09" misc_feature 1325533..1325598 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /note="Predicted helix-turn-helix motif with score 1788.000, SD 5.28 at aa 27-48, sequence MTATALAAEAGTTPPWVSQAER" misc_feature 1325950..1326303 /locus_tag="CMS_1264" /old_locus_tag="CMS1264" /inference="protein motif:HMMPfam:PF06114" /note="HMMPfam hit to PF06114, Protein of unknown function DUF955, score 5.5e-18" gene complement(1326981..1327235) /locus_tag="CMS_1265" /old_locus_tag="CMS1265" /db_xref="GeneID:6157125" CDS complement(1326981..1327235) /locus_tag="CMS_1265" /old_locus_tag="CMS1265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710003.1" /db_xref="GI:170781671" /db_xref="GeneID:6157125" /translation="MGVKGARAPIPAPRVTPPILRSQRWRSRSLARGEGHVRGVPREL ALPKPQDGNSWRGEARRSAGELRIRMHLGINPGDKKKRAD" gene 1327342..1328643 /locus_tag="CMS_1266" /old_locus_tag="CMS1266" /db_xref="GeneID:6157126" CDS 1327342..1328643 /locus_tag="CMS_1266" /old_locus_tag="CMS1266" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710004.1" /db_xref="GI:170781672" /db_xref="GeneID:6157126" /translation="MPVVLSAAPAGWFPDGSGQLRYWDGSAWTQHVAPMVQPAATQAP APSEAATAAVVASQQADAARNAQAAEAAHDKAMRAAEAAQAKAVRAAEAEQQRATKLA HREAAMQAKAAEREAAAREKSARAAAATAAMPVQPRTRASAVPAAPAAPNAVLTDTRP SRHPATTWVIAAAVALAVLITTAIGGFGGMFVSVGLVALITALYPLFTGRRSWVPALA TRPRNSATAAGAILLLIIGAAVPVAALAPGPRQADAISASASPTPTATPTPTVTPTPV VHVVEDVNAKSATDARALLREAGYVVQYVLETGGVPSVTDGMTVKSQNPVAGSRTAAG STVTLTLLALAPTPTPEPTVAPTVAPAPQPAAPAPAPVAPAPAPAPAAPAPAPAQQTG GINPGGFCSSVGAVAQADNGRSYKCGGKGADASGRYHWNTM" misc_feature order(1327834..1327902,1327915..1327968,1328011..1328079) /locus_tag="CMS_1266" /old_locus_tag="CMS1266" /note="3 probable transmembrane helices predicted for CMS1266 by TMHMM2.0 at aa 165-187, 192-209 and 224-246" misc_feature 1328167..1328367 /locus_tag="CMS_1266" /old_locus_tag="CMS1266" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 5.5e-05" gene complement(1328651..1330306) /locus_tag="CMS_1267" /old_locus_tag="CMS1267" /db_xref="GeneID:6157127" CDS complement(1328651..1330306) /locus_tag="CMS_1267" /old_locus_tag="CMS1267" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710005.1" /db_xref="GI:170781673" /db_xref="GeneID:6157127" /translation="MIRERREAEARRRVLPSLRRQERETAAAVVRLEAWAAQVETEAA VHAIARADAAAELERAMGRIHDHVLVKPGVWETLLSLGRAVREWRLALQPLERARDQA AAHDDEERRRSEADRLARTRATEEVRAARTELAGVRHRVATTTAECEQDDVRLTGPRP GAGRTDQQRELVAPWLDPTLDAARSDLFLAALDLHRDFLANAASTMLRGLRAACQVVA GTSPSDLEGEKAKAAWQLFFLVVPAISTTFASSGRMFGSLGREALGWLLIDEAGQAAP QHAAASIWRARRVVAVGDPLQLPPIISVPQKTVGALALAHGVTPAWIPPRASVQTLAD RVARFGTSLPQGDETVWVSAPLRVHRRCDDPMFTICNRMAYAGLMFHAVPDRSSATPP DRFDGPDGPRITPSHWADEPATTPGSHLQPRQLERARSAIDYLLGLGVQAEEIIAISP FRSVADRLGSLRYDYPGLTAGTIHTAQGREAEVVLLVLGGDPDKPGARAWAAESVNLL NVAVSRARRRLFVIGDLAAWRQLPYFSQVASALPARRRGGDDA" gene complement(1330350..1331876) /locus_tag="CMS_1268" /old_locus_tag="CMS1268" /db_xref="GeneID:6157128" CDS complement(1330350..1331876) /locus_tag="CMS_1268" /old_locus_tag="CMS1268" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710006.1" /db_xref="GI:170781674" /db_xref="GeneID:6157128" /translation="MDERRTQDHQLRTLRFWLLLELLNPQPVPAVTARTDASETRVSA WRPGDPLPWDTLPPPPPRHGANRVWRHTVYLGAYPVEATFARLHALFPEDRDAYQERR GGTTAAAGLLVDDGGRYVPDSAILSSASWAVGHLSSSVTTSREWIDGFGRAAEAWTEA VDEYEGVRADAGEAGLEPLDGDALSGLLRLAHASAGLVGDADLATDAIRIQSVPMSLR TAEGAPEIDFLNSFHLEDLTSLSEQVARGDVGAALAAYLTGDEDVAEDRRIDVVADLD AMEAGAGIERLPKGRWPTTPEHPLATSQQFAVDHALHDLAPTAGLMGVNGPPGTGKTT MLRDLIAGNVTERARRLAALARPEDAFTSVVHQWNGPQGHRMSVPQLRPELTGFEMVV ASSNNSAVENISSQIPGRDAIDARWRASADYFGELASLLMRRTGASTPSPDSDGTECM GPRRSEAREEGEPGHVLLRLLVWRAERQARGARPCARPGHAGAAHAVGQGVRPVPAVG" misc_feature complement(1330878..1330901) /locus_tag="CMS_1268" /old_locus_tag="CMS1268" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1331997..1332458) /locus_tag="CMS_1269" /old_locus_tag="CMS1269" /db_xref="GeneID:6157129" CDS complement(1331997..1332458) /locus_tag="CMS_1269" /old_locus_tag="CMS1269" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710007.1" /db_xref="GI:170781675" /db_xref="GeneID:6157129" /translation="MPDDAEGIAEVHVRSWQETYAHLLPAEYLAGLDVAARAEQWRGT LASSAAAPPFVALDGDRIVGFALAGPARDEDPPRPFQLYAINVVASAHGSGAGQALID AAVGDSPAYLWAADDNPRAEAFYRRNGFARDGGVERRMYQGAEMVTMRMVR" misc_feature complement(1332066..1332299) /locus_tag="CMS_1269" /old_locus_tag="CMS1269" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 6.6e-11" gene 1332703..1334355 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /db_xref="GeneID:6157130" CDS 1332703..1334355 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /codon_start=1 /transl_table=11 /product="putative solute-binding transport protein" /protein_id="YP_001710008.1" /db_xref="GI:170781676" /db_xref="GeneID:6157130" /translation="MPRPPRPVIALTALVAATGLMAGCSAGGGGGRAASGEPKAGGTL TYLEPQTWTTLYPPAAGFYPNGAVVNNITDRLLWQDPGTLELEPWIATALPEVNADAT EYTFDIRTDVTYSDGTPLTAENVVANFDLYGKGDVDRALTVSEAINNYDRGEVVDADT VRFHFTAPSPGFAQATSTINSGLVSDSTLAKADDGFGPGQAETVIGSGPFTVSGESVG TQIQLAAREDYDWAPPAAEHQGRPLVDGVDLMVAAEDSVRVGTVVAGQADVARQIEAP DEAQFRTGDLQLVAAATNGVDNGINLRFRTPQLEDVRVRQAIIAGVDRPAILDTLFSD SYPLATGVLAKSALGYVDTSSYYAHDPEKAAALLDEAGWAPGPGGIREKDGRKLELVV NEALPQPRSKEVVTLIQSQLAEIGVEVDLFSGDQAAQTKASQDPDALQAYHSMVGRAD YDVLKSQYFSTNRNVLLNRNPADGSIADPELDALLTRIASEPTTEARQAASAAAQQRI ADQAYVLPLFEEPQVYGLRGDVQGFATESVGRPVFAGVWVDR" sig_peptide 1332703..1332801 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /note="Signal peptide predicted for CMS1270 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.532 between residues 33 and 34" misc_feature 1332721..1332789 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /note="1 probable transmembrane helix predicted for CMS1270 by TMHMM2.0 at aa 7-29" misc_feature 1332742..1332774 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1332955..1334097 /locus_tag="CMS_1270" /old_locus_tag="CMS1270" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 6.4e-58" gene 1334393..1335331 /locus_tag="CMS_1271" /old_locus_tag="CMS1271" /db_xref="GeneID:6157131" CDS 1334393..1335331 /locus_tag="CMS_1271" /old_locus_tag="CMS1271" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710009.1" /db_xref="GI:170781677" /db_xref="GeneID:6157131" /translation="MMSYAIRRAGQAVIVLVLAYVVAYVLLAALPGDAVLARYGSPEL GLSPEQLAAIRESYGADRPLIVRLGDSAAAFAQGQLGYSVQSGAAVSTLLATAIPSTL VLAVLGLVVAVVLAVPIAFLATYGGARWIRRVFRDLPPLLVSLPVFWVGIILIQVLSF RLGLVPIIGASPGEALILPVLTIAVPITAPLAQVLIRSIDDVSAMPFIEVVRARGAGT PWLLLHGVGRNALLPTLTMAGLLFGELVGGAVVTEAVFGRAGVGQLTVQAVASRDSPV LLAVVVLSTVAYVVINLAVDLLYPVLDARLRGGGAR" misc_feature order(1334438..1334506,1334699..1334767,1334804..1334872, 1334915..1334983,1335218..1335286) /locus_tag="CMS_1271" /old_locus_tag="CMS1271" /note="5 probable transmembrane helices predicted for CMS1271 by TMHMM2.0 at aa 2-24, 89-111, 124-146, 161-183 and 262-284" misc_feature 1334684..1335316 /locus_tag="CMS_1271" /old_locus_tag="CMS1271" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.2e-33" gene 1335328..1336176 /locus_tag="CMS_1272" /old_locus_tag="CMS1272" /db_xref="GeneID:6157132" CDS 1335328..1336176 /locus_tag="CMS_1272" /old_locus_tag="CMS1272" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710010.1" /db_xref="GI:170781678" /db_xref="GeneID:6157132" /translation="MSATLATIDAPRARPRSRARFAGGLVLPVLVVLVMLLWALVPGL FASGSPTASVAPSLQAPSAAHWFGTDSTGRDLYTRVVFGASQSVVGAVVAVLVGLVVG TLLGVVAGTVGGLVDDVLMRLVDVLLAIPGLLLSLSIVILLGFGTTNAAIAVGVTSIA VFARLSRAEVVRVRISEYVETAYGSGGTVVQVLRRHVLPNSLTPVIALAALQFGSAIL QISTLGFLGYGAPPPTPEWGLLVAEGRDYVATAWWLTVLPGAVVVAVVLATNRISQSI RGGQLA" sig_peptide 1335328..1335507 /locus_tag="CMS_1272" /old_locus_tag="CMS1272" /note="Signal peptide predicted for CMS1272 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.368 between residues 60 and 61" misc_feature order(1335388..1335456,1335589..1335657,1335694..1335762, 1335772..1335825,1335940..1336008,1336066..1336134) /locus_tag="CMS_1272" /old_locus_tag="CMS1272" /note="6 probable transmembrane helices predicted for CMS1272 by TMHMM2.0 at aa 21-43, 88-110, 123-145, 149-166,205-227 and 247-269" misc_feature 1335577..1336161 /locus_tag="CMS_1272" /old_locus_tag="CMS1272" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3.2e-34" gene 1336173..1337870 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /pseudo /db_xref="GeneID:6157133" misc_feature 1336305..1336328 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." /pseudo misc_feature 1336578..1336877 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1e-07" /pseudo misc_feature 1336647..1336691 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /note="PS00211 ABC transporters family signature." /pseudo misc_feature 1337112..1337696 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.2e-53" /pseudo misc_feature 1337133..1337156 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." /pseudo misc_feature 1337466..1337510 /locus_tag="CMS_1273" /old_locus_tag="CMS1273" /note="PS00211 ABC transporters family signature." /pseudo gene 1337867..1338940 /locus_tag="CMS_1275" /old_locus_tag="CMS1275" /db_xref="GeneID:6157134" CDS 1337867..1338940 /locus_tag="CMS_1275" /old_locus_tag="CMS1275" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001710011.1" /db_xref="GI:170781679" /db_xref="GeneID:6157134" /translation="MSGARLGFFGRVLDAGTPAERYEAALEQIQHAERHGFASVWLAQ HHFGEEGGGLPSPFVFLAAAAARTARIGLGTAVLTLPLEDPLRAAEDASVLDLLSGGR VQLGLASGCTPASFPAFGRDSGDRHALFQDHLQVLLDALEGRGVRGTGSRIYPPADGL AARIWQGTFSVSGGARIGSRGDGLLLSRTQPRPDTAPDAPLHELQLPIIAAYREALPA GAPERILASRTALVVDPSDRAAARELAEPALRRFARSVIGERADALALDGVLRVTDTH LGTVDEVVDGLAADRTLDPATDVSFQVHSIPATHALTLRSLELLGAEVAPRLGLATAA AAADALRAAHLPAPTPILAGGAA" misc_feature 1337867..1338850 /locus_tag="CMS_1275" /old_locus_tag="CMS1275" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 1.4e-26" gene 1338937..1339605 /locus_tag="CMS_1276" /old_locus_tag="CMS1276" /db_xref="GeneID:6157135" CDS 1338937..1339605 /locus_tag="CMS_1276" /old_locus_tag="CMS1276" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710012.1" /db_xref="GI:170781680" /db_xref="GeneID:6157135" /translation="MTHPADVIDLLAGLAPDHPMSRIRDLRPAARANAQRSFEALLEP AVPGAFTYAERYAVAAFVARLHGSDRAAAFYADLLGDADASLVPVVDRAARDGATAGP TGAYREQGLVAESVGTDPWTPDAATRDAVGPRLAAALAHAHLLVIRPRESSPEALRAL GAAGWTPDQIVSLSQLIAFLAFQLRVAWGLAVLAADPAVASAAVSADPARTASSADPA GAAG" gene 1339602..1340234 /locus_tag="CMS_1277" /old_locus_tag="CMS1277" /db_xref="GeneID:6157136" CDS 1339602..1340234 /locus_tag="CMS_1277" /old_locus_tag="CMS1277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710013.1" /db_xref="GI:170781681" /db_xref="GeneID:6157136" /translation="MTVTDPVTDPVDLARPDAFTQEGLGWVPWLAPVDEADLDDAQRA ALVEPARARMPYFRLLARDPAALEARTLTDLDVFHNPDGGIGRAERELAAAATSRVNG CVFCASVHAAAATRFSGRGDDVQRLLDQGRGAPLGDDRWDAVVAASVALAATPLAFGS ADVARLRAAGLDDVAVVDVINGAAFFNWANRLMLSLGEPEVPASRRGAGT" misc_feature 1339791..1340051 /locus_tag="CMS_1277" /old_locus_tag="CMS1277" /inference="protein motif:HMMPfam:PF02627" /note="HMMPfam hit to PF02627, Carboxymuconolactone decarboxylase, score 1.7e-10" gene 1340231..1340845 /locus_tag="CMS_1278" /old_locus_tag="CMS1278" /db_xref="GeneID:6157137" CDS 1340231..1340845 /locus_tag="CMS_1278" /old_locus_tag="CMS1278" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710014.1" /db_xref="GI:170781682" /db_xref="GeneID:6157137" /translation="MSGVPVPAVPSLLDHVVIAGPDLAALVAGFADRTGIVAESGGVH PTGTANAFVAFTVAGVRGPRYLELIGPDFARVDRALPTRFGIADVAAAARARGEDPGP VADLSRRAPVGALLACRLTHPRGARPDVPFLIDWGSTSNPETTIGPAVELLAFTQTAV DPAPTEAARAALDLPPGALAALVVDLRDGYALRVRAADGTPVDR" gene complement(1340917..1341945) /locus_tag="CMS_1279" /old_locus_tag="CMS1279" /db_xref="GeneID:6157138" CDS complement(1340917..1341945) /locus_tag="CMS_1279" /old_locus_tag="CMS1279" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710015.1" /db_xref="GI:170781683" /db_xref="GeneID:6157138" /translation="MPSLVPAPRPGRLRISALALAGAAALFSGAAPAALAATAPADTR SSTSEIVRAPVTLPETGSPDATARARAHWTPERMAAASLASAAADDDAVPTSSGPSSR PAAQPLAASAATAAPPISIAQRVTPVSHIGRIFYTLNGQDYACSANVVKAANRSTVAT AAHCMTAKGAFATDAVFVPGYHDGDHDGDYGTWPVVGGVVAGGYTEDNDDLGDDAGFE VVALDADGRNIQSVVGASPVLFDQPLVKEGTVYGYPAARRFDGESLQRCRGVFQRESA DQINLPCDMNEGVSGGPIFAGDDANGAQYADEDARYDDYSHILGPIWQANEHTAYDGA ARIQPAEG" sig_peptide complement(1340917..1341024) /locus_tag="CMS_1279" /old_locus_tag="CMS1279" /note="Signal peptide predicted for CMS1279 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.832 between residues 36 and 37" misc_feature complement(1341760..1341777) /locus_tag="CMS_1279" /old_locus_tag="CMS1279" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature complement(1341835..1341903) /locus_tag="CMS_1279" /old_locus_tag="CMS1279" /note="1 probable transmembrane helix predicted for CMS1279 by TMHMM2.0 at aa 15-37" gene complement(1342081..1343601) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /db_xref="GeneID:6157139" CDS complement(1342081..1343601) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710016.1" /db_xref="GI:170781684" /db_xref="GeneID:6157139" /translation="MGGTRADPRSLPLHRSRTAGDPMTTAPPAASAAPIAAPDAPEAP ADVSRRRRRVLTASFIGTTVEYYDFYLYATASALVFGSQFFPNQTPAVALLSSFAAYG VGFLARPIGGIVAGHLGDRIGRKRLLVYSLVLMGIASTLIGVLPTYATIGLASVVGLV LLRLVQGIAAGAEWGGSALLSVEHAPAHRRGLFGAFTQMGSAGGMLLATAVFAATRFT LGEEQFLAWGWRLPFLLSAVLVGVGLVIRLRVEDAAEFTEITAAGDVERFPLGVVLRR HPHAVLITAGLRLVQPALYSILTVYTLSYLSEKRGDSGSALTAVLIVSALSVLTTPLW GWISDRVGRRRLTIASTAGIGILIWPFFAFLDSGPLLLLPLVFALGMNVFHDSIYGPQ AAWFAEQFPTGVRYSGVSLGYQVGSIFSVGLTPLLAVLFLQWGGGSPWILCAYIGLYA VLTIAAALAAKDPAREAIAARRAAAADDERDAVHPAVAVAGAAGAGGRERERATVR" misc_feature complement(order(1342222..1342290,1342318..1342386, 1342447..1342500,1342510..1342569,1342588..1342656, 1342684..1342752,1342864..1342932,1342960..1343028, 1343062..1343127,1343155..1343223,1343260..1343328, 1343371..1343439)) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /note="12 probable transmembrane helices predicted for CMS1280 by TMHMM2.0 at aa 55-77, 92-114, 127-149, 159-180,192-214, 224-246, 284-306, 316-338, 345-364, 368-385,406-428 and 438-460" misc_feature complement(1342228..1343445) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 9e-27" misc_feature complement(1342315..1343430) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature complement(1343032..1343109) /locus_tag="CMS_1280" /old_locus_tag="CMS1280" /note="PS00217 Sugar transport proteins signature 2." gene 1343745..1345115 /locus_tag="CMS_1281" /old_locus_tag="CMS1281" /db_xref="GeneID:6157140" CDS 1343745..1345115 /locus_tag="CMS_1281" /old_locus_tag="CMS1281" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001710017.1" /db_xref="GI:170781685" /db_xref="GeneID:6157140" /translation="MPDAWPPLRFAAFVMNTASHIQHGLWRHPSARQHEFDDVQLWVD LAKTLERGRFDAMFFADVVGLYGPGDGAYDVNAREGLQFPSNDPSVLISALAVSTEHL GFAFTSSVLQAHPFDFARKVSTLDHITKGRIAWNVVTSALDGAARNFGHDGLEDHDAR YAWADEYLDVVYKLWEGSWDDDALQRDKERGVFSDASRIHRIDHEGPRYKVAGPHLSS PSPQRTPVLFQAGSSPVGRRFAARNAEAQFILSSTPEKTRALIEDTRALAVDAGRRAD DLSFWLGLSFITGSTEEEAKRNEAEIDEYLSADGFLLHSNLGFDPKTGEQLDPATPLS QVETQAGQSHLNWLREASPDREPTIADLARLSAKLRGRVVGTPEQIADVLAGWQEAGV DGINVINWTLPGSYEDFVDHVTPVLQERGLQQKEYEPGTLRHKLTGRDRLPESHPAAA YRGAFS" gene 1345112..1346350 /locus_tag="CMS_1282" /old_locus_tag="CMS1282" /db_xref="GeneID:6157141" CDS 1345112..1346350 /locus_tag="CMS_1282" /old_locus_tag="CMS1282" /codon_start=1 /transl_table=11 /product="putative dioxygenase" /protein_id="YP_001710018.1" /db_xref="GI:170781686" /db_xref="GeneID:6157141" /translation="MTGAATGASTADLRAEFLPLFDRIRDGAVARERDRELAHDAVAL LRGARFGAIRLPVADGGRGASLAQLVELVVELSAADANVGHLLRGHFGYVELVLRRPP GPARDEWIRRIATGAIVGNATSEQTGNTLADISTTLQERDGRWILDGTKYYSTGTLYS DWIYLAAGREAADGVERVTLAIPTDAPGVTAVDDWDAFGQTLTASGTTTFAGVEVDPA TVTAYREAPLSHIQAFYQLYRVAVLAGIAEEVERDAVGYVRSRTRTYIHATAALPRDD PQVLDVVGRISASAFAVRATTLAAAARLDDAVATAPPGDALDRPTLDAAENAVYQAQV LAVDEVPAAATLLFEVGGASATFRVRALDRHWRNARVVASHNPAIYKARAIGEYAVAG RGPVDAWAAYEKVGATAFPR" gene complement(1346607..1347638) /locus_tag="CMS_1283" /old_locus_tag="CMS1283" /db_xref="GeneID:6157142" CDS complement(1346607..1347638) /locus_tag="CMS_1283" /old_locus_tag="CMS1283" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710019.1" /db_xref="GI:170781687" /db_xref="GeneID:6157142" /translation="MAAPPTERPSMTHASRTAARILARTLLRRPALAVVAGAAGLIAL VAVSPTSSATADDAVPAPSTVTRSAAEAADAVAFWTPERLEGAGSPELTRVTGTPTSP DDTPSADELTTSAARDQRRAQPVIPVAQQVDPVSHIGIVAYVVDGKEFSCTGNAVESE NGLTVATAGHCAFPGKDPSKMVFVPGYMKGQPYTVWPVTSVTLAAGWRETLDPSRDTA FLTVGSPDGRTLTEAVGASPVEFHQKLTHYTTIIGYPASGRFTGDAPFLCSGIARATH LEGQSGQELDCDMKEGASGAPLFDGSGPGARQYSVLSGGLEEKPLVVAPVWDRVIEAA YRTAQSRVG" sig_peptide complement(1346607..1346771) /locus_tag="CMS_1283" /old_locus_tag="CMS1283" /note="Signal peptide predicted for CMS1283 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.796 between residues 55 and 56" gene 1347750..1348223 /locus_tag="CMS_1284" /old_locus_tag="CMS1284" /db_xref="GeneID:6157143" CDS 1347750..1348223 /locus_tag="CMS_1284" /old_locus_tag="CMS1284" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710020.1" /db_xref="GI:170781688" /db_xref="GeneID:6157143" /translation="MTSRPASLPTADPRIAPDGGRSSIPRTLGRILLGLVLIMAGTGH LTVARESFQAQVPTWLPMDPDFVVLASGVVEIVLGLSLVLLGRWRVWVGLVVAAFFVA IFPGNISQLVTRTPAFGLETDAARAIRLVFQPLLVLWALWATGAWSAWRNRRARR" misc_feature order(1347831..1347890,1347948..1348007,1348020..1348088, 1348131..1348199) /locus_tag="CMS_1284" /old_locus_tag="CMS1284" /note="4 probable transmembrane helices predicted for CMS1284 by TMHMM2.0 at aa 28-47, 67-86, 91-113 and 128-150" gene complement(1348274..1349782) /locus_tag="CMS_1285" /old_locus_tag="CMS1285" /pseudo /db_xref="GeneID:6157144" misc_feature complement(order(1348331..1348390,1348433..1348501)) /locus_tag="CMS_1285" /old_locus_tag="CMS1285" /note="2 probable transmembrane helices predicted for CMS1285 by TMHMM2.0 at aa 274-296 and 311-330" /pseudo misc_feature complement(1348898..1349218) /locus_tag="CMS_1285" /old_locus_tag="CMS1285" /inference="protein motif:HMMPfam:PF07687" /note="HMMPfam hit to PF07687, Peptidase dimerisation domain, score 4e-07" /pseudo gene complement(1349904..1350521) /locus_tag="CMS_1287" /old_locus_tag="CMS1287" /db_xref="GeneID:6157145" CDS complement(1349904..1350521) /locus_tag="CMS_1287" /old_locus_tag="CMS1287" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710021.1" /db_xref="GI:170781689" /db_xref="GeneID:6157145" /translation="MTTHTASTTVRRAALVLALPLIGGLALAGCSQPGTAPASAPGAG SSSASAAPSTGSDADPAPADGALAAAVDTAIAAVPGSALVSVDQEAGGTSWEVVVAEP DGREHEVHTGADGSAVTAGPVADADDADDLADTAALLQGARIGHADAASALTGAVAGT LTELGLDADGGRILWEGDVVDASGVTHSVRVDAASGDVVSQDVED" sig_peptide complement(1349904..1350053) /locus_tag="CMS_1287" /old_locus_tag="CMS1287" /note="Signal peptide predicted for CMS1287 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.855 between residues 50 and 51" misc_feature complement(1350417..1350485) /locus_tag="CMS_1287" /old_locus_tag="CMS1287" /note="1 probable transmembrane helix predicted for CMS1287 by TMHMM2.0 at aa 13-35" misc_feature complement(1350432..1350464) /locus_tag="CMS_1287" /old_locus_tag="CMS1287" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(1350598..1351929) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /db_xref="GeneID:6157146" CDS complement(1350598..1351929) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /codon_start=1 /transl_table=11 /product="two-component sensor kinase" /protein_id="YP_001710022.1" /db_xref="GI:170781690" /db_xref="GeneID:6157146" /translation="MCEPSRRRRSLRVRATTAVALIALVLGALGAVAFAVVLRGSLED GVREAAGRTLETVADAVAAGGPQAVTDLGDDDLVQVLDGDGRVIAHGEDADGPPLHVD DRADDVVVDGERRLVVAGEVEDAGGVTVVVAASLEEADEAVAAVVRLLLVAVPVVVAL MALLAWVVVGRALRPVERIRRDAEAIGSAAGDARIDEPGTGDEVDRLARTLNGMLARL EASRTAQRRFVSDASHELRSPLATVRQHAELARMYPDRTSLAELADVVLAEGGRQQDL VDALLVLSRLDDGAALDRRPVDLDDVALEEVARLRGRADVRVDGAGITACRVSGDARL LALAVRNLVENAARHAATTVTVSTTAGHGGVVLTVDDDGCGIPAGERERVLDRFVRLD EGRDRDSGGSGLGLAIVREVAEAHGGSATVDAAPGGGARVALRLPAEQSAE" sig_peptide complement(1350598..1350702) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /note="Signal peptide predicted for CMS1288 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.845 between residues 35 and 36" misc_feature complement(1350613..1350942) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2e-39" misc_feature complement(1351063..1351260) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 3.3e-15" misc_feature complement(1351270..1351479) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 1.1e-13" misc_feature complement(order(1351423..1351491,1351819..1351887)) /locus_tag="CMS_1288" /old_locus_tag="CMS1288" /note="2 probable transmembrane helices predicted for CMS1288 by TMHMM2.0 at aa 15-37 and 147-169" gene complement(1351922..1352598) /locus_tag="CMS_1289" /old_locus_tag="CMS1289" /pseudo /db_xref="GeneID:6157147" misc_feature complement(1351939..1352166) /locus_tag="CMS_1289" /old_locus_tag="CMS1289" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 3.9e-25" /pseudo misc_feature complement(1352236..1352598) /locus_tag="CMS_1289" /old_locus_tag="CMS1289" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 8.1e-35" /pseudo gene complement(1352652..1354256) /locus_tag="CMS_1290" /old_locus_tag="CMS1290" /db_xref="GeneID:6157148" CDS complement(1352652..1354256) /locus_tag="CMS_1290" /old_locus_tag="CMS1290" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710023.1" /db_xref="GI:170781691" /db_xref="GeneID:6157148" /translation="MGTNHHPPPLDAGRPPNGALIALSTTPPPGDPRRPRRDPGAARP PRQRRRRVNPQEMRDVRARLRATIYEGTEPAHGRLGDLYSPRQIVDFCLDLGEVMLAS GADVRAVEIAIVAVSTKWNLAPLELDITGTAITIQYAPLEGPPLVKLRVVTAEGSDLH RLSLVYQIVDELLHDDRDMTSAVEGLVEVLKSPPRWPSWITDAAMGLFGVSVSLQAGG SLPGAVGAFLLMIGAMVLGRQLSRRGIPPFFVVAVQSAIVAAVGTLAIWSGVMPAGSA AAMVAAVVVLILPHVTIVTWAQDAISGFRAMALSRAMIIVLIVAGIAVGIPGGLALTA GVDIEVDPTDITLRALPLWMLLITTFFAAGATGITQGANARVMPVAIGMALVGTVSLW ILKAAGIPLLAATFLVATLLGALGTVVAARVRVSATAIAVPAFCGSLLPSLAVASALL NSMAGTSGATGAFVGAMATTLAIGAGLVLGSLLATPQARRHLRRRAKRVVVQSVRLDT TPIGIIRDPSLVDPPARPAGGGVDLG" misc_feature complement(order(1352802..1352870,1352907..1352975, 1352994..1353062,1353075..1353134,1353153..1353221, 1353249..1353317,1353366..1353434,1353447..1353515, 1353549..1353617)) /locus_tag="CMS_1290" /old_locus_tag="CMS1290" /note="9 probable transmembrane helices predicted for CMS1290 by TMHMM2.0 at aa 214-236, 248-270, 275-297,314-336, 346-368, 375-394, 399-421, 428-450 and 463-485" misc_feature complement(1353390..1353974) /locus_tag="CMS_1290" /old_locus_tag="CMS1290" /inference="protein motif:HMMPfam:PF06738" /note="HMMPfam hit to PF06738, Protein of unknown function DUF1212, score 4.9e-13" gene complement(1354335..1355509) /locus_tag="CMS_1291" /old_locus_tag="CMS1291" /pseudo /db_xref="GeneID:6157149" gene complement(1355547..1356206) /locus_tag="CMS_1293" /old_locus_tag="CMS1293" /db_xref="GeneID:6157150" CDS complement(1355547..1356206) /locus_tag="CMS_1293" /old_locus_tag="CMS1293" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710024.1" /db_xref="GI:170781692" /db_xref="GeneID:6157150" /translation="MIIRAVTLPARDTAEVADAYRALGFPVRITDDAVEVEIGPSRLR FVHDPAYSGAHHLAFTIPTGTFAAARAWLGERAEVIAPDGCDEFAGPGTWDSRSVYFR GPDAQGLELIERRALAPDGLPTGRFRASDIVAVSEVGVVVDDVPAAVGLLEEAGLHPY GGFATDGFAAVGDVDGLVILVARDRMWVPEGTQAAADVPVVVDAGLGPDVVLGPGKRI L" gene complement(1356258..1356878) /locus_tag="CMS_1294" /old_locus_tag="CMS1294" /db_xref="GeneID:6157151" CDS complement(1356258..1356878) /locus_tag="CMS_1294" /old_locus_tag="CMS1294" /codon_start=1 /transl_table=11 /product="putative nudix hydrolase" /protein_id="YP_001710025.1" /db_xref="GI:170781693" /db_xref="GeneID:6157151" /translation="MAGLEVVAAVLIRDGRALACRRAAHKEGAGTWEFPGGKVEPGET PEAALAREIREELGVEVTVGALVDRSEVPVGERVVDLACYRADPVGPLPTASTDHDEL RWVALADLGDLAWSAPDLPAVRRLVLEARHPDADWVIDMGARPPVADPEHDVHVARLA GASDRLAASAAALGDAVRAAHAAGLDEHRIAVAARLSLAHVRELLD" misc_feature complement(1356492..1356872) /locus_tag="CMS_1294" /old_locus_tag="CMS1294" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 2.2e-25" misc_feature complement(1356711..1356770) /locus_tag="CMS_1294" /old_locus_tag="CMS1294" /note="PS00893 mutT domain signature." gene 1357004..1357351 /locus_tag="CMS_1295" /old_locus_tag="CMS1295" /db_xref="GeneID:6157152" CDS 1357004..1357351 /locus_tag="CMS_1295" /old_locus_tag="CMS1295" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001710026.1" /db_xref="GI:170781694" /db_xref="GeneID:6157152" /translation="MKISHQRHFVVAAEVLHLPKAADQLGISRAKLASSIRAIEEHYG RSVFDPQSTETRLTKTGRLAYEEALEELAKPSTPPEAPKPPAGGKAKASKGQGRAPVV KGQPKPYKRTQGR" misc_feature 1357049..1357114 /locus_tag="CMS_1295" /old_locus_tag="CMS1295" /note="Predicted helix-turn-helix motif with score 1138.000, SD 3.06 at aa 16-37, sequence LHLPKAADQLGISRAKLASSIR" gene complement(1357410..1358246) /locus_tag="CMS_1296" /old_locus_tag="CMS1296" /db_xref="GeneID:6157153" CDS complement(1357410..1358246) /locus_tag="CMS_1296" /old_locus_tag="CMS1296" /codon_start=1 /transl_table=11 /product="non-heme haloperoxidase" /protein_id="YP_001710027.1" /db_xref="GI:170781695" /db_xref="GeneID:6157153" /translation="MTEITAHHGLLKDTNLHVDDTGGTGRPVVLIHGWPLSGESWSKQ VPAFEAAGYRVITYDRRGFGRSDKPLTGYDYDTFASDLDAVLTALDLVDVTLVGFSMG GGEIARYIGTRGEARLHSVVFASAVPPYLEKTDDNSDGPLTKDAAAEMTAGLTKDEDS FYDEFTTGFYSANGVLKVTEAERQEAIALAHQSKKHAALASMAAFATTDFRDDLTKVT VPTLVIHGDSDATVPFEGSGARTHQAIAGSELHVVKDAPHGVTVSHPEEWNQAVLEFL EK" misc_feature complement(1357425..1358090) /locus_tag="CMS_1296" /old_locus_tag="CMS1296" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1.4e-32" gene 1358422..1360086 /locus_tag="CMS_1297" /old_locus_tag="CMS1297" /db_xref="GeneID:6157154" CDS 1358422..1360086 /locus_tag="CMS_1297" /old_locus_tag="CMS1297" /codon_start=1 /transl_table=11 /product="putative acetyl-coenzyme A synthetase" /protein_id="YP_001710028.1" /db_xref="GI:170781696" /db_xref="GeneID:6157154" /translation="MRTDRTSAVERFRWPDVGESFNWAVDWFDGIARGNDRVALHVVA GDGSERRLTFDEMATRSDRVATWLVARGVRKGDHVMLMLGNRVELWETMLAIMKAGAV ILPTSTVLGSADLTDRVLRAGVRHVIADLAHTAVFDDVPGEYARIAIGATGDTSVPDG WADYRDADDAPADRVGVAVASTDPALVYFTSGTTSKPKMVVHTHVSYPVGHLTTAYWL GLQPGDVHLAISSPGWGKHAWSCFFAPWIAEATVFVHDYARFDAHALVEQLDRAEVTT FCAPPTVWRMLIQAGIRERPGQLREIMSAGEPLNPEVIARIEEWWGLTIRDGYGQTET TAIVANAPGDAVVPGSMGTALPGVDVVLVDPVTGEPADEGEICLDLATRPVNLMAGYL GDDARTAESMRDGYFHTGDVARRDADGTITFIGRTDDIFKSSDYKISPFEVESVLIEH PAVAEAAVVGAPDPVRLNVAKAYVHLAAGWEPDEATALAVLKHARERCPAFMRVRRVE FGELPKTASGKIRRVELRQREVAASDAGERLDGEWRDDQFPGLRAR" misc_feature 1358578..1359795 /locus_tag="CMS_1297" /old_locus_tag="CMS1297" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 6.8e-117" misc_feature 1358980..1359015 /locus_tag="CMS_1297" /old_locus_tag="CMS1297" /note="PS00455 Putative AMP-binding domain signature." gene 1360212..1360880 /locus_tag="CMS_1298" /old_locus_tag="CMS1298" /db_xref="GeneID:6157155" CDS 1360212..1360880 /locus_tag="CMS_1298" /old_locus_tag="CMS1298" /codon_start=1 /transl_table=11 /product="putative transcriptional repressor" /protein_id="YP_001710029.1" /db_xref="GI:170781697" /db_xref="GeneID:6157155" /translation="MRENPSYALEDVAEIRRLVDENPWATIVSGTGAGLVASHYPVLL DPDRDDLTLLTHVGRPDERIHELGQRDGYDGEVLVIVQGPHGYVSPGWYDADPAVPTW NHVSAHLTCRVEILSPEENLRVLGQLVDRFEDRMPEPRRMEGTLEDAAYAARISAGTV GLRLVATRFVAKAKLSQDKPPHVVERVLHELEHGAEYPNPALAAEMRRARARAEGGSA GADA" misc_feature 1360212..1360718 /locus_tag="CMS_1298" /old_locus_tag="CMS1298" /inference="protein motif:HMMPfam:PF04299" /note="HMMPfam hit to PF04299, Negative transcriptional regulator, score 4.3e-16" gene 1360877..1362442 /locus_tag="CMS_1299" /old_locus_tag="CMS1299" /db_xref="GeneID:6157156" CDS 1360877..1362442 /locus_tag="CMS_1299" /old_locus_tag="CMS1299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710030.1" /db_xref="GI:170781698" /db_xref="GeneID:6157156" /translation="MSGLLLAGGRLPGSDAPVDVLVRDGVIASVGPAGSADATGVETR ALDGRFVIPGLWDNHVHFTQWTKVSRRLDLSRASSAAEAVALVRDALAARAASAGSGA VMSAGTPEALVGYGFRDGLWPDLPTKDLLDAVAGDTPVLLVSGDLHCCWASSAALAPH GYGDHPTGLLREDDCFDFMYRVEEGDASSLDAQAVQVAREAARRGVVGVIDLEIDWNA DRWRRLAALGHDALRVEAGIWPQDLDRARDAGLRTGDVLAGTGGLVRVGPAKVVTDGS LNTRTAYCFDPYPDLDGQGGDAHGGACGQLSVPPEELRGLMERAARQGLRPAIHAIGD HANRLALDAFAHLDRVLGGAHRDADGTAGSIEHAQLLTHEDVARFAALGVVAGVQPEH AMDDRDIADVYWAGRTARAFALADLRAAGTRLALGSDAPVAPLDPWVTMSAAVGRSRD GREPWHPEQAIDRAAALDASVRTRMAPGERADLAVVERDPLAASTSADDLRAMRVSAT LLGGRLTHDTLGG" gene 1362483..1363511 /locus_tag="CMS_1300" /old_locus_tag="CMS1300" /db_xref="GeneID:6157157" CDS 1362483..1363511 /locus_tag="CMS_1300" /old_locus_tag="CMS1300" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710031.1" /db_xref="GI:170781699" /db_xref="GeneID:6157157" /translation="MRAITYTRTGAPDVLQPVDRDEVAPGPGEVRVRVVVSGVNPTDW KSRDGGAPGQELPFPEVVPNQDGAGVIDAVGPDVTGLAVGDRVWIMLAAHGRPTGTAQ EKTVLPVDRVAPLPDGLSFDLGASLGVPAVTAHRALTVSEDGPSRLAPGALAGKQVLV AGGAGAVGHAAIQLARWAGATVITTVSSPEKGALATAAGAHHVVDYKAGDAAAEIQSI APDGVDLIVEVAPAQNAELNQAVAKNRASVAVYANNGGDTVTLPVVDSFVKNLRYQFL LLYTVGQEALDAARADIHLALIDGALPVGEEAGLPITRFPLERTADAHQAVEDGVTGK VLIDVTPA" misc_feature 1362510..1363499 /locus_tag="CMS_1300" /old_locus_tag="CMS1300" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 1.7e-56" gene complement(1363603..1363899) /locus_tag="CMS_1301" /old_locus_tag="CMS1301" /db_xref="GeneID:6157158" CDS complement(1363603..1363899) /locus_tag="CMS_1301" /old_locus_tag="CMS1301" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710032.1" /db_xref="GI:170781700" /db_xref="GeneID:6157158" /translation="MTGPLALVIANAAVMAVVALAGARTPRWLRGSSWLLLVVSLGVL ALHLLGDAWDIPANLLAITILISTCLNASALAPLVMQRLLTRESRPRRRVAGTE" sig_peptide complement(1363603..1363671) /locus_tag="CMS_1301" /old_locus_tag="CMS1301" /note="Signal peptide predicted for CMS1301 by SignalP 2.0 HMM (Signal peptide probability 0.972) with cleavage site probability 0.844 between residues 23 and 24" misc_feature complement(order(1363663..1363722,1363750..1363818, 1363837..1363890)) /locus_tag="CMS_1301" /old_locus_tag="CMS1301" /note="3 probable transmembrane helices predicted for CMS1301 by TMHMM2.0 at aa 4-21, 28-50 and 60-79" gene complement(1364055..1364744) /locus_tag="CMS_1302" /old_locus_tag="CMS1302" /db_xref="GeneID:6157159" CDS complement(1364055..1364744) /locus_tag="CMS_1302" /old_locus_tag="CMS1302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710033.1" /db_xref="GI:170781701" /db_xref="GeneID:6157159" /translation="MSETGSIADGYAAADIRAAEAPLLAAGAQLMRVAAAGLARVCRA EAPSGPVLVLVGAGNNGGDALLAAADLARDGRDVRVIRTASRIHGAAARAAEAGVPIT PAEELDDAEVAALARASALVVDGILGIGTTASPALRGEARRVVAALLPVILGAGGPVV VACDIPSGVGCDDGQVPDPTVLSADVTVTFGAGKPGLMRGPGRALAGRVELVDVGLDL SGATPVARAAR" misc_feature complement(1364157..1364678) /locus_tag="CMS_1302" /old_locus_tag="CMS1302" /inference="protein motif:HMMPfam:PF03853" /note="HMMPfam hit to PF03853, YjeF-related protein,N-terminal, score 1.1e-30" gene complement(1364741..1365556) /locus_tag="CMS_1303" /old_locus_tag="CMS1303" /db_xref="GeneID:6157160" CDS complement(1364741..1365556) /locus_tag="CMS_1303" /old_locus_tag="CMS1303" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710034.1" /db_xref="GI:170781702" /db_xref="GeneID:6157160" /translation="MTGAQPSDAEPGRDDDLDPHDAPDGRPSAGSRALSAGPLASLRS ATIGRLQYRVLYREMRRATFPRDSPTGSLPGPDPYGLAVVGEGTAVGYQTVSHDLGVA GQVAHKLTVRTGRGVFWSVQAFPDFTVRSWRAGVDAFPAWASTDVAVLALGIGDAIRF TPTPLWESLLDACITAMTARMPADALVLVTEVPPLEISPVTPPLIAGPVGRHADALNR STRRVVARHNRADSVPFPAWRIPEFTAPNPEDTLYGRVYRAWADLLVERIAPS" gene complement(1365672..1366700) /locus_tag="CMS_1304" /old_locus_tag="CMS1304" /db_xref="GeneID:6157161" CDS complement(1365672..1366700) /locus_tag="CMS_1304" /old_locus_tag="CMS1304" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001710035.1" /db_xref="GI:170781703" /db_xref="GeneID:6157161" /translation="MAQEIELGLDTFGDVTVGPDGRELPYAEVIRNVVAEGVLADRVG IDFIGLGEHHRDDYAISSPEVALAAIAAKTSRIRLGSAVTVLSSDDPVRVFQRFATLD AVSDGRAEVILGRGSFTESFPLFGYELSDYERLFEEKLGLFAELVKETPVTWTGSTRA GLTEHDVFPKTAKRIKTWVGVGGSPESVVRAARHGFPLMLAIIGGEPHRFAPYADLFA RALDQLEQPRLPVGIHSPGYVGETDAEAREAFFPDYQVMHARIGKDRGWPPLARASYE QEIEHGSLYVGSPETVARKIAATLKAVGATRFDLKYSAGPFSHERMMGGIERYGTIVA PMVRDILA" misc_feature complement(1365768..1366616) /locus_tag="CMS_1304" /old_locus_tag="CMS1304" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 6e-10" gene complement(1366790..1368274) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /db_xref="GeneID:6157162" CDS complement(1366790..1368274) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710036.1" /db_xref="GI:170781704" /db_xref="GeneID:6157162" /translation="MPTTSRSFTVRPGRLMTDTSGVGFRSERGPILIALMMTTGLVAI DSTILATAVPSIVDDLGGFASFPWLFSIYLLAQAVSVPLYAKLSDTVGRKPIILIGIG LFLVGSVLCGFAWSMPALIAFRALQGLGAGAVQPMAITIAGDIYTVAERAKTQGYLAS VWAVSSVVGPTLGGVFSEFASWRWIFFVNVPLCLLAGWMIVRRFHESIERTRHRVDYA GAALLTVGLSLLILAVLEGGQAWAWDSAPSIGAFAIGAVLIVAFLLVERRAAEPVLPL WVFSRRLLLTTTLVSLGVGAILIGLTSYVPTYLEGSLGVTPLVSGLALAALTIGWPIS ASLSGRLYLRIGFRRTVLIGMALTIVGTGSISLLAGTPTLAGIAAGCFVVGLGLGLVA TPSLIGAQSSVGWGERGVVTGANLFARSIGSAVGVAVFGAIANAIFAESAGGQKDPDA VIAASGAVFLAVGVCALATVVAGLLMPESRVDDTEIARAEPVVG" sig_peptide complement(1366790..1366939) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /note="Signal peptide predicted for CMS1305 by SignalP 2.0 HMM (Signal peptide probability 0.664) with cleavage site probability 0.566 between residues 50 and 51" misc_feature complement(1366805..1368178) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 5.6e-05" misc_feature complement(order(1366850..1366918,1366961..1367029, 1367087..1367155,1367168..1367227,1367264..1367332, 1367375..1367443,1367480..1367533,1367546..1367614, 1367672..1367740,1367918..1367986,1368020..1368088, 1368116..1368184)) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /note="12 probable transmembrane helices predicted for CMS1305 by TMHMM2.0 at aa 31-53, 63-85, 97-119, 179-201,221-243, 248-265, 278-300, 315-337, 350-369, 374-396,416-438 and 453-475" misc_feature complement(1366970..1368172) /locus_tag="CMS_1305" /old_locus_tag="CMS1305" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1368435..1370141 /locus_tag="CMS_1306" /old_locus_tag="CMS1306" /db_xref="GeneID:6157163" CDS 1368435..1370141 /locus_tag="CMS_1306" /old_locus_tag="CMS1306" /codon_start=1 /transl_table=11 /product="putative gamma-glutamyltransferase" /protein_id="YP_001710037.1" /db_xref="GI:170781705" /db_xref="GeneID:6157163" /translation="MLERGGNAFDAAVASAFVLHVVEPHLNGPGGDMTAVVHVAGDAA PKLLMGQGSAPAAASPERFRQEGLDRVPGAGALAAAVPAAVDAWLLLLRDHGTWELAD AWAFAIGYARDGHPVLESVRRTIAGVGDLFREHWSASAAFWMPDGEAPVAGSLVRNPA WAAAMERILAEASTAAGPDATREQRIEAARTVWAEGFVAEEMVASVQDPHRHSTGADH AGLITAEDLASSRASWEDAVSIEFRGLRIWKTDAWGQGPALLQALMILDGFTDEEIDP ATAAGIHRISEAQKLALADREAYYGDAVPGGAPLDVLLSAEYAAERRALITDEASHEL RPGRVDGVEPFLPPLVVEGDAPASAGGTGEPTVSRTGETRGDTCHLDIVDRWGNMISA TPSGGWLQSSPFIPALGFCLGTRLQMTWLEPGGPSSLVPGRRPRTTLTPTLITREGEP VEALGSPGGDQQDQWQLPYLLRTIVGGFSPQQAVDAPTFHTTSVPGSFWPRTWTPGGL VVEGRVGDDVIADLRARGHEVEVVGDWTLGRLSAVTRDPATGLLGAAANPRGAQGYAV GR" misc_feature 1368435..1370120 /locus_tag="CMS_1306" /old_locus_tag="CMS1306" /inference="protein motif:HMMPfam:PF01019" /note="HMMPfam hit to PF01019,Gamma-glutamyltranspeptidase, score 9.2e-162" gene 1370138..1370671 /locus_tag="CMS_1307" /old_locus_tag="CMS1307" /db_xref="GeneID:6157164" CDS 1370138..1370671 /locus_tag="CMS_1307" /old_locus_tag="CMS1307" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710038.1" /db_xref="GI:170781706" /db_xref="GeneID:6157164" /translation="MTIDRQIASALIADHARRRVGSDAALRAASAPGRFVAEPDAATP SAGVVLGSSEQRNATCGDVVDLRVLAVDPAHPSVDAGAAVDPAEPIAVRWHGRGCTVS QASASMLAELVEGRTAAEAAALVVELRALIRSHELLPGAEDRLGDAFALADSGRYPLR GTCALLAWHALEEALAR" gene complement(1370691..1371314) /locus_tag="CMS_1308" /old_locus_tag="CMS1308" /pseudo /db_xref="GeneID:6157165" gene 1371403..1371771 /locus_tag="CMS_1310" /old_locus_tag="CMS1310" /db_xref="GeneID:6157166" CDS 1371403..1371771 /locus_tag="CMS_1310" /old_locus_tag="CMS1310" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710039.1" /db_xref="GI:170781707" /db_xref="GeneID:6157166" /translation="MDPDTASALALTLSLGVPVLAILVAVVLVVAKARGSGWGWYLVG CTVVALMLALGLAILATWSAQTGLGYLDEGVSTFGIVLMGILGGVATFVVGVIAGVVG LISAAVRQRDRVPSSALVHG" sig_peptide 1371403..1371501 /locus_tag="CMS_1310" /old_locus_tag="CMS1310" /note="Signal peptide predicted for CMS1310 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.890 between residues 33 and 34" misc_feature order(1371430..1371495,1371514..1371582,1371640..1371708) /locus_tag="CMS_1310" /old_locus_tag="CMS1310" /note="3 probable transmembrane helices predicted for CMS1310 by TMHMM2.0 at aa 10-31, 38-60 and 80-102" gene 1371768..1372517 /locus_tag="CMS_1311" /old_locus_tag="CMS1311" /db_xref="GeneID:6157167" CDS 1371768..1372517 /locus_tag="CMS_1311" /old_locus_tag="CMS1311" /codon_start=1 /transl_table=11 /product="putative integral membrane phosphatase" /protein_id="YP_001710040.1" /db_xref="GI:170781708" /db_xref="GeneID:6157167" /translation="MTRPGAGRVARAATGVATRVGPTGTFAAFLILGLLVITAASSLF AGLYVAVIDDDSVALLDEPALHLAMDVRSPWLDTAVTIFTEAAGVYAVPIVGVAVIVA LAIRRRQWVPVVLGLTAGAGSLLMTEVGKELVGRDRPPRADAVPPYETSPSFPSGHTL NASVVAGIVAYLLVLRQMRRAARVLTYVVAIAFAASVSLSRVYLGHHWLTDVIAGWLL ALAWLALIVVAHRVRLRLLEARERERDDRGA" sig_peptide 1371768..1371902 /locus_tag="CMS_1311" /old_locus_tag="CMS1311" /note="Signal peptide predicted for CMS1311 by SignalP 2.0 HMM (Signal peptide probability 0.732) with cleavage site probability 0.290 between residues 45 and 46" misc_feature order(1371852..1371920,1372008..1372076,1372095..1372148, 1372224..1372292,1372311..1372379,1372389..1372457) /locus_tag="CMS_1311" /old_locus_tag="CMS1311" /note="6 probable transmembrane helices predicted for CMS1311 by TMHMM2.0 at aa 29-51, 81-103, 110-127, 153-175,182-204 and 208-230" misc_feature 1372053..1372472 /locus_tag="CMS_1311" /old_locus_tag="CMS1311" /inference="protein motif:HMMPfam:PF01569" /note="HMMPfam hit to PF01569, Phosphoesterase,PA-phosphatase related, score 5.5e-29" gene complement(1372530..1373990) /locus_tag="CMS_1312" /old_locus_tag="CMS1312" /db_xref="GeneID:6157168" CDS complement(1372530..1373990) /locus_tag="CMS_1312" /old_locus_tag="CMS1312" /codon_start=1 /transl_table=11 /product="putative guanine deaminase" /protein_id="YP_001710041.1" /db_xref="GI:170781709" /db_xref="GeneID:6157168" /translation="MSDHRTTPSPAAPAPAPVARRAVHRGHVLHITGSPLVQDARRHL VSVPDGALAVDDAGRIAWVGPFRDLPAEFADAPVHGDASDFLIPGFVDAHVHFPQTYT TSAHGGGQLLEWLDTCVFPSEARLEDEGFARMIAADFTRSRVRAGTTSALVFGSAFPH AQDALFEASRDAGLRLVSGRGIQTVGSGPATPLLTSEEDAIALSCAEIDRWHAVDTGD ATTATLQVAIVPRFSLSVTPTTLRGLGELYDVARGEGVHFHSHLNENDRPGTGEIAAV REVFGTDTYLDTYDGLFLPGSERGGSSLLGRRSVFAHAVHCQDSELARLAETGSSIAH CPTSQQFLGSGTMPWRRTVASGVNVAIGSDVGAGDEWLISRVLNDAFKVHLSEPGGAG VEIDAAELLFTGTLAGARALDMEERYGNLDVGKDADFLTITPDLWEPLALTLAHGIRA DDDARATDQILFTLLMGLREPAIAAVHVQGRRVSAR" misc_feature complement(1372692..1373738) /locus_tag="CMS_1312" /old_locus_tag="CMS1312" /inference="protein motif:HMMPfam:PF01979" /note="HMMPfam hit to PF01979, Amidohydrolase, score 1.5e-33" gene complement(1374201..1374854) /locus_tag="CMS_1313" /old_locus_tag="CMS1313" /db_xref="GeneID:6157169" CDS complement(1374201..1374854) /locus_tag="CMS_1313" /old_locus_tag="CMS1313" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710042.1" /db_xref="GI:170781710" /db_xref="GeneID:6157169" /translation="MTGTARKTHGRLRRARRRLADAPAIVPAMGVALAYAAILIYSRV ALGHEVDLDRIVATLTVGAVVGLILTFVLSRRRRAAPPRIRFVDVSEAIDDGRLPADA DADADSWRWLLLRRREVHDQLGGPWAVLVAAVLLGGTVAVGVLGGPPLAWTLPAVIAV TVAGMAVVRRRRVAEIDVLLQPLLDQDHAPDAPAAADPDDADSGSAAATGPGRRPPA" sig_peptide complement(1374201..1374308) /locus_tag="CMS_1313" /old_locus_tag="CMS1313" /note="Signal peptide predicted for CMS1313 by SignalP 2.0 HMM (Signal peptide probability 0.962) with cleavage site probability 0.896 between residues 36 and 37" misc_feature complement(order(1374351..1374410,1374420..1374488, 1374633..1374692,1374720..1374788)) /locus_tag="CMS_1313" /old_locus_tag="CMS1313" /note="4 probable transmembrane helices predicted for CMS1313 by TMHMM2.0 at aa 23-45, 55-74, 123-145 and 149-168" gene complement(1374868..1375446) /locus_tag="CMS_1314" /old_locus_tag="CMS1314" /db_xref="GeneID:6157170" CDS complement(1374868..1375446) /locus_tag="CMS_1314" /old_locus_tag="CMS1314" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710043.1" /db_xref="GI:170781711" /db_xref="GeneID:6157170" /translation="MKGLQERFERASLGGVFLVVTAFYFVLRTGIDLVITGDGLSVAG IIGRFIGSLLFGGVMVAVIAWQRRRGGGASTSADVTAAIRSGQAPLAADPGVWIPALE WRRGQFRRSLWLTPLLFLVFIAMGVALLVLEPGSPIGWLVIVVFVGLGIGVLVQARRA IPRIDGLLHQLRERDGARGAAADAAPTRPAGA" misc_feature complement(order(1374982..1375035,1375048..1375116, 1375255..1375314,1375342..1375410)) /locus_tag="CMS_1314" /old_locus_tag="CMS1314" /note="4 probable transmembrane helices predicted for CMS1314 by TMHMM2.0 at aa 13-35, 45-64, 111-133 and 138-155" gene complement(1375548..1376183) /locus_tag="CMS_1315" /old_locus_tag="CMS1315" /db_xref="GeneID:6157171" CDS complement(1375548..1376183) /locus_tag="CMS_1315" /old_locus_tag="CMS1315" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710044.1" /db_xref="GI:170781712" /db_xref="GeneID:6157171" /translation="MMPTAPDRPQPLFRRIRRAWADAPAVVQVLVVAVVIFVWLTAFG IGQPSDDPGSIVFRGVVAVLLGSVRVGALWIRRLSWPGAPREVEVSEAAEDGELPAGA DLVVWRDALERRRREIRHDAWVLPITLLLFVGLAFLPRSRPFGASDAAFLILLAVFAT YAASLIVSRALRRDRVDALLIPLQEQVRRDEERRAAWAPPTPEDRIPPAAG" misc_feature complement(order(1375671..1375739,1375767..1375820, 1375965..1376021,1376049..1376117)) /locus_tag="CMS_1315" /old_locus_tag="CMS1315" /note="4 probable transmembrane helices predicted for CMS1315 by TMHMM2.0 at aa 23-45, 55-73, 122-139 and 149-171" gene 1376271..1377488 /locus_tag="CMS_1316" /old_locus_tag="CMS1316" /db_xref="GeneID:6157172" CDS 1376271..1377488 /locus_tag="CMS_1316" /old_locus_tag="CMS1316" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710045.1" /db_xref="GI:170781713" /db_xref="GeneID:6157172" /translation="MRGLTRAVAFRSVERPPFRPSRARPSALPSRARSPALPSGGAVL EIAAEVLDALADGRRLAVAWVTDVLGSAPRTAGTAMAVDDRGRVIGSISGGCVEGAVI EVATGVLDDGAPALTSFGVSDDDAFQVGLTCGGRIGVVVVEVAPAGDARSPVPDAVRA ALEDARAGRAASLALVLEGPAVGTWVTADADPVGADPARRIRAELAARLAAGRSGTTE VDCADGPMRVLHLVAAPPPRLIVFGAVDFSAALADAAALLGYRVTVCDARPAFATRAR FPTAHEVVAEWPDEYLARTEVDARTVICVLTHDDRFDVPLLVAALRLPVAFVGAMGSR ATDVRRRALLVEEGLTDTELARLRSPIGLDIGASTPQETAVSILAEVLAARAGTEGAP LTTTTGPIHGETA" misc_feature 1376421..1376636 /locus_tag="CMS_1316" /old_locus_tag="CMS1316" /inference="protein motif:HMMPfam:PF02625" /note="HMMPfam hit to PF02625, Protein of unknown function DUF182, score 7.8e-20" gene 1377485..1378795 /locus_tag="CMS_1317" /old_locus_tag="CMS1317" /db_xref="GeneID:6157173" CDS 1377485..1378795 /locus_tag="CMS_1317" /old_locus_tag="CMS1317" /codon_start=1 /transl_table=11 /product="putative amino acid transporter" /protein_id="YP_001710046.1" /db_xref="GI:170781714" /db_xref="GeneID:6157173" /translation="MTAASAASAGARAPQPGLARRLGLLDATVLGLGLGAMIGAGIFA VMPAAARAAGSGLLVGLAIAAVVAFCNATASAQLAARYPSSGGSYLYGRERLGEWPGF LAGWSFVIGKTASCAAMALTFAAYAVPAAWQRPVAALAVTALAVVGCLGVTRTARLAR VIITVVLAVIALVLVAGLVAGGPEAAAEQVAGVVDTTPYGVLQSAGLLFFAFAGYARI ATMGEEVRDPARTIPRAILLALGGALVVYALVAVTLLGVLGQARLGGSTAPLADVVRD AGWSWAVPVVGVGAAAACLGALLALLPGIGRTSLAMAREGDLPRGLAVVHPRYRVPQR AEIAVAVVVVALVLTVNLRGVVGFSSFGVLLYYVVANAAAFTQERADRRYPRALQVVG VVGCLVLVATLPGVSIGVGAGVLLVGVVGRAIVLARRQRGAQAR" sig_peptide 1377485..1377640 /locus_tag="CMS_1317" /old_locus_tag="CMS1317" /note="Signal peptide predicted for CMS1317 by SignalP 2.0 HMM (Signal peptide probability 0.857) with cleavage site probability 0.574 between residues 52 and 53" misc_feature order(1377545..1377613,1377626..1377694,1377791..1377859, 1377872..1377940,1377959..1378027,1378070..1378129, 1378190..1378258,1378322..1378390,1378487..1378540, 1378550..1378609,1378643..1378696,1378706..1378762) /locus_tag="CMS_1317" /old_locus_tag="CMS1317" /note="12 probable transmembrane helices predicted for CMS1317 by TMHMM2.0 at aa 21-43, 48-70, 103-125, 130-152,159-181, 196-215, 236-258, 280-302, 335-352, 356-375,387-404 and 408-426" misc_feature 1377566..1378792 /locus_tag="CMS_1317" /old_locus_tag="CMS1317" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 1.2e-17" gene complement(1378815..1381709) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /db_xref="GeneID:6157174" CDS complement(1378815..1381709) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710047.1" /db_xref="GI:170781715" /db_xref="GeneID:6157174" /translation="MSMTVDGREIPGEPAPGQSLRTWLREHEVFSVKKGCDSGDCGAC AVLLDGEAVHSCILPAFRAAGREVTTAAGLGTPGDLHPVQARFVEAAGFQCGFCTPGM VVTAASLGDDELDDLPRLMKSSLCRCTGYRAIDEAIRGEHGGADHAHGDGCGGARPEG LGPVRATGSAAAAGSAATAADGSGDDARAAERAQTGRVGTSLHAPASERVVSGLEPYT LDVQVPGLLHASLVRSPHPHARIRSIDTSEALALPGVHAVLTHHDSPATLYSSARHED RFDDPDDSRVFDDVVRFRGQRVAAVIADDVGIAEAAVRLVRVDYEVLPAVFDPDEARR PGAPLVHGDKDPAVSRLADPQRNIVAEMHGEHGDVAAGLARAAEVVSGTWSTQRVAHT HLETHATVGWMEEGRLVLRTSSQVPFLVQREICRLFELEPERVRVFTARVGGGFGGKQ EILTEDVVTLAVLATGRPVQLEFTRSDEFTLSPSRHPMRVGVTVGATSDGLLTALAVD VLSDTGAYGNHGPGVMFHGCNESITLYRSPAKRVDAQSVYTNNLPSGAFRGYGLGQVI FAVDSALDELARRLGISGFEIRRRNAVVPGDPLIITEAEGPDLGFGGSYGLDQCLDLA ERALGDGGGDPVPAGDRWLVGEGMAAAMIATMPPRGHFADVTVAMAADGTVTVSVGTA EFGNGTTTVHAQLAATALGTTPGRIRIRQSDTDVTRYDTGAFGSAGTVVAGKAVHVAA TALADLLREAAAARTGIAAAAFALTPDALVAGDVSVPIAELAGPDGLAAQAHEDGALR SLAFNVHAFRVAVDPATGEVRILRSVQAVDAGTVLNPAQLRGQVEGGTAQAIGTAVYE EVVHDGEGRILTDVLRNYHIPQLADLPVTEVLFARTHDDLGPHGAKSMSEAPYNPVAP ALANAVRDAIGIRPHDLPMSRDRVWRLLHGGGLQPRFDSPTTLGERGTRE" misc_feature complement(1379061..1380731) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /inference="protein motif:HMMPfam:PF02738" /note="HMMPfam hit to PF02738, Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding, score 1.4e-120" misc_feature complement(1380738..1381076) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /inference="protein motif:HMMPfam:PF01315" /note="HMMPfam hit to PF01315, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead, score 2.9e-37" misc_feature complement(1381290..1381502) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /inference="protein motif:HMMPfam:PF01799" /note="HMMPfam hit to PF01799, [2Fe-2S]-binding, score 4.8e-23" misc_feature complement(1381491..1381703) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /inference="protein motif:HMMPfam:PF00111" /note="HMMPfam hit to PF00111, Ferredoxin, score 0.0067" misc_feature complement(1381578..1381604) /locus_tag="CMS_1318" /old_locus_tag="CMS1318" /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature." gene complement(1381706..1382590) /locus_tag="CMS_1319" /old_locus_tag="CMS1319" /db_xref="GeneID:6157175" CDS complement(1381706..1382590) /locus_tag="CMS_1319" /old_locus_tag="CMS1319" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710048.1" /db_xref="GI:170781716" /db_xref="GeneID:6157175" /translation="MPARTRDDLAALGPTVAALAGGSGIFAEPHPHLIGLVDLHALGW EPLVVTDDGLEIAATCTIAEVAGIAPQDGWAAHPLFLQACTALYGSTKIWRVATVGGN ICSALPAGPMTALASALDADALIWRAATPDAPARDERMPVAELVTGDRTTALKPGDVL RSIHVPAASLRARTAFRKIALSPIGRSGSVVIGRLDEGGAFTLTVTGATLRPELLRYP ALPDAAALADDVRAIGSWFTDAHGAADWRRAVSALLAEEIRAELAGDAAGAGDGPASG ERGTPPGAATTTTAGARP" sig_peptide complement(1381706..1381786) /locus_tag="CMS_1319" /old_locus_tag="CMS1319" /note="Signal peptide predicted for CMS1319 by SignalP 2.0 HMM (Signal peptide probability 0.961) with cleavage site probability 0.950 between residues 27 and 28" gene 1382791..1383531 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /db_xref="GeneID:6157176" CDS 1382791..1383531 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710049.1" /db_xref="GI:170781717" /db_xref="GeneID:6157176" /translation="MRIRTTARALRSRRRSRRPSRGGVALAATGSALAASLLLAGCAA APEGPPAPPFDAVALPPEAPTAVPDQRVAAGEVVALASADADGVDGPVVATSVLGVAE GQPDYWSGFEDGARFADRVPFFAFVQTRWLEGERGPANGPVLRPFLADGTEVDIIQRQ VGGVSASAECPYAMPVLRPDDGYAAEEHLECVVYAVPEGQELAELRWHDVPRTVLETP DPATHPFLAAPVVWEVDALPAAATGAGR" sig_peptide 1382791..1382958 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /note="Signal peptide predicted for CMS1320 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.293 between residues 56 and 57" misc_feature 1382812..1382943 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /note="PS00041 Bacterial regulatory proteins, araC family signature." misc_feature 1382851..1382919 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /note="1 probable transmembrane helix predicted for CMS1320 by TMHMM2.0 at aa 21-43" misc_feature 1382884..1382916 /locus_tag="CMS_1320" /old_locus_tag="CMS1320" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1383528..1383971 /locus_tag="CMS_1321" /old_locus_tag="CMS1321" /db_xref="GeneID:6157177" CDS 1383528..1383971 /locus_tag="CMS_1321" /old_locus_tag="CMS1321" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710050.1" /db_xref="GI:170781718" /db_xref="GeneID:6157177" /translation="MTPQRRRAHRELRAAAVLLLVQGVLMEGLVAVGLVVLGIPQAAI TDHAEVLALPYLQDELYPMMAMSGIFAALRITAAVGLWRDRLWGLALAGVMCVVTLVL MVFLLPAGLLDGLLSGAALVLLLHASLGRDAAGRVRTALSAVDQP" sig_peptide 1383528..1383671 /locus_tag="CMS_1321" /old_locus_tag="CMS1321" /note="Signal peptide predicted for CMS1321 by SignalP 2.0 HMM (Signal peptide probability 0.931) with cleavage site probability 0.453 between residues 48 and 49" misc_feature order(1383594..1383662,1383705..1383773,1383792..1383860) /locus_tag="CMS_1321" /old_locus_tag="CMS1321" /note="3 probable transmembrane helices predicted for CMS1321 by TMHMM2.0 at aa 23-45, 60-82 and 89-111" gene 1384119..1385828 /locus_tag="CMS_1322" /old_locus_tag="CMS1322" /db_xref="GeneID:6157178" CDS 1384119..1385828 /locus_tag="CMS_1322" /old_locus_tag="CMS1322" /note="Homologs often associated with surface polysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710051.1" /db_xref="GI:170781719" /db_xref="GeneID:6157178" /translation="MAGSARQFNVALEPTVDPATSEEEFSRQDDAVAPAPATWPTTHH RPDVVIRKGLATLVNRTLTPHQALVTDLLFIRDALLATGIDVWLIRGNDERPVIAIDV QNRDTVVRALVAANADEPLYAKTVDGRRRPPLLVADGRLTDNPDAGIFRLYRPRIEPE GLLAYGASTAVELQFFRFEGETIVWPVENSLTREILPANEVVPTTVEMYGHEWKTLRG MFDAQASDITFDIDMVFSWVDGNDPEFQKRRAERMKDVVVGEGDDSEARFRQIDELKY ALRSVYLFAPWVRRIFIVTDSPKPSWLADHPAVTFVRSEEFFTDPAALPTHNSQAVES QLQHIPGLSEHFLYSNDDMFFGRPVQPGMFFSPGGITKFIEAATRIGLGDNDSDRSGF ENSARVNRRLLMERFGRLITRHLEHAATPLRKSVLLELEQEFAEDFHRTQLSRFRSST DISVTNSLYHYYAQMTARAVQQENAKVAYVDTTSRAGLDMLPGLLKRRSQDFFCLNDG SFPEVPAEERQERVQDFLERYYGIPAPWEAEVADAAGASPAGAPAEPAGPAAPASPAS AAE" gene 1385825..1386808 /locus_tag="CMS_1323" /old_locus_tag="CMS1323" /db_xref="GeneID:6157179" CDS 1385825..1386808 /locus_tag="CMS_1323" /old_locus_tag="CMS1323" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710052.1" /db_xref="GI:170781720" /db_xref="GeneID:6157179" /translation="MSRAGSPADRTPYEVLGVDPAADTATLRAAYRRLVRATHPDTGG EAHLFHAVQRAWELVGDPDDRAAYDRGQGRATASDDDDPLGPDAAGYAPAPGSGTRLG AALHGVAGALARAHYLDRVAAWQGIAPGADLGVDPWSPELVRRAPRDVRWLLAKALAE EATARAAASLGMGATIFHDVRPLAGQGKIDHVVLAPAGLFALSSEDWGTEVQLVRGEL QPVAPDPDGAFAPGDAPVTWLVGAACSLAASAGVRFAAAVVVVPDDALAQPVERVERG RNRGALVVRRSVLPLVLRDGVSEEGRLSVADPYAVRALLRERLTLLGPAAG" misc_feature 1385855..1386040 /locus_tag="CMS_1323" /old_locus_tag="CMS1323" /inference="protein motif:HMMPfam:PF00226" /note="HMMPfam hit to PF00226, Heat shock protein DnaJ,N-terminal, score 1.9e-19" gene complement(1386916..1387359) /locus_tag="CMS_1324" /old_locus_tag="CMS1324" /db_xref="GeneID:6157180" CDS complement(1386916..1387359) /locus_tag="CMS_1324" /old_locus_tag="CMS1324" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710053.1" /db_xref="GI:170781721" /db_xref="GeneID:6157180" /translation="MGGMDDDSLLTPPGVAGYSITEIVESESGGEPLFVSAIHLDGEH VANWISTDLDEDDGIVADLDHAFGGPATDRMFRQAAAIFPDAVLSEILPELVSFLWVV ADVAGVADDQDLDFEAAIRVVAAEGDLDAQDRDLLGRLESLKRID" gene 1387456..1388433 /locus_tag="CMS_1325" /old_locus_tag="CMS1325" /db_xref="GeneID:6157181" CDS 1387456..1388433 /locus_tag="CMS_1325" /old_locus_tag="CMS1325" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710054.1" /db_xref="GI:170781722" /db_xref="GeneID:6157181" /translation="MTIAADPAPSAAAVPATDRVPRDLPVVLDPVVWHERAARHAERA DAFSAGFRARRLAGRTHEVDDFLFTYYPHKPSLLRRWHPGAGVVLAGAAADDERAAWR WYVAEAAAAGSAPGGVRVDAFAYLAARGSTASFIERILSRTAARPGRFSCFGLHEWAM VYKVGPGEQRHERLPLRLGSAATDEVVETHKLACTHIDAFRFFTPEAVQRNALAPTRE TQPDLEQPGCLHAGMDVYKWATKLGPLVPGELLLDAFELARDIRSLDMRASPYDVSGL GLEAVRIEEPAGKARYAAEQRGFAERSNGLRTRILAELDHARRAAAAGL" gene 1388531..1389493 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /db_xref="GeneID:6157182" CDS 1388531..1389493 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710055.1" /db_xref="GI:170781723" /db_xref="GeneID:6157182" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1388603..1388668 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1388668..1388789 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1388789..1388854 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1388939..1389481 /locus_tag="CMS_1326" /old_locus_tag="CMS1326" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(1389538..1389975) /locus_tag="CMS_1327" /old_locus_tag="CMS1327" /db_xref="GeneID:6157183" CDS complement(1389538..1389975) /locus_tag="CMS_1327" /old_locus_tag="CMS1327" /note="Possible downstream translational start sites." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710056.1" /db_xref="GI:170781724" /db_xref="GeneID:6157183" /translation="MPSDAAPPPAGGASAPIAAQAAVRVDSWLWAVRIYKTRSQATAA CRAGHVRVGDERAKASQSVRPGDEVRVRVAGSERILVVRRTLVKRVGPAIAAEALTDL TPPPPPREAAPATIVRDRGAGRPTKRDRREIERLRDPDGVRGR" misc_feature complement(1389769..1389882) /locus_tag="CMS_1327" /old_locus_tag="CMS1327" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 0.0044" gene 1390019..1391512 /locus_tag="CMS_1328" /old_locus_tag="CMS1328" /db_xref="GeneID:6157184" CDS 1390019..1391512 /locus_tag="CMS_1328" /old_locus_tag="CMS1328" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710057.1" /db_xref="GI:170781725" /db_xref="GeneID:6157184" /translation="MSISRRTLLTASVSGLSLLGLAACTRTTPTPATPTATASATPTP TPTAGVAGLPDPVAFARSDWAGDPFARGSGSFLRPGATTADREALARPIEDRVFFAGE ATSADRPGTVAGAYASGLRAAGEVDRAGAGSERIAVVGAGIAGTAAARALRDAGHDVV LVEARAELGGRIRAAGGTDWPHPAELGALWIAADDDDLLRDALEAAGITRYGLALITE SRGPDGAVLEPSTAGSDAIAAARARALAQPGAVSLAAALRETGGDALSTEGGAAAPAA RLAALLSTDVAIAHGASPDELSGARGLDEPAPVGNVAVTGGFAGLVQHLLRDQDIDVL RESTVSRIAYGNGRVGLRLGSGESLSVDRVVVTVPLGVLQAGAIAFDPALPSSHDVAI RALGPGRADRIWLRFAEPFWSTTATVWTSYDAGGSFTRWYNLMPISGEPVLMAEVGAA AADRVAAMDDQALRSAALRTLAPFADPALLAEGTATPEPGPSATPTP" sig_peptide 1390019..1390198 /locus_tag="CMS_1328" /old_locus_tag="CMS1328" /note="Signal peptide predicted for CMS1328 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.612 between residues 60 and 61" misc_feature 1390058..1390090 /locus_tag="CMS_1328" /old_locus_tag="CMS1328" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1390445..1391509 /locus_tag="CMS_1328" /old_locus_tag="CMS1328" /inference="protein motif:HMMPfam:PF01593" /note="HMMPfam hit to PF01593, Amine oxidase, score 2.6e-08" gene complement(1391562..1393046) /locus_tag="CMS_1329" /old_locus_tag="CMS1329" /db_xref="GeneID:6157185" CDS complement(1391562..1393046) /locus_tag="CMS_1329" /old_locus_tag="CMS1329" /note="Contains hydrophilic region." /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710058.1" /db_xref="GI:170781726" /db_xref="GeneID:6157185" /translation="MQRILGGVRLVAALVVVTALVADFDYVQGFTTFAAENWFSYFTT QSGMAGAVVLAASGLHALRGRVEPELMAAVRAVVLSYVVVSGVVFGLIVLESSSQAYY VEVPWSSRLLHFVIPAYALLDWTLAPGRPRVTWKAVGWAMLFPIAWCAFTEYRGPRVG WYPYFFLDPAQVGVPYEITAWLALVAGVLAGCPRSSWRSAACGPRDPGAGGAGTTTRR MRRPSRTSPRAPPRTRPRRRRARRRPPSAELPSRASTDARMRAWGVTTSADPRSPDDG GTSLELRWPTVMTHDGDPEAAVIDVVNVGAGRWIPREGDAFVAIGAFTEPDAPAPGIS FAVAGGQRAAVALDPGDRTRIPVAITAGDWAALRPGPHDLHIALVGLSARTAGPLRVD VTAEAIARRRPVDRSERPPTDSDMRRSHDARISWLRTRVAAADALVPLVSELAAVASR AEAVARIRTLLDLDEEHAQLLLHTQLHGLLPYAAEAIRHEWPRP" sig_peptide complement(1391562..1391663) /locus_tag="CMS_1329" /old_locus_tag="CMS1329" /note="Signal peptide predicted for CMS1329 by SignalP 2.0 HMM (Signal peptide probability 0.915) with cleavage site probability 0.496 between residues 34 and 35" misc_feature complement(order(1392765..1392833,1392870..1392938, 1392981..1393034)) /locus_tag="CMS_1329" /old_locus_tag="CMS1329" /note="3 probable transmembrane helices predicted for CMS1329 by TMHMM2.0 at aa 5-22, 37-59 and 72-94" gene 1393075..1394169 /locus_tag="CMS_1330" /old_locus_tag="CMS1330" /db_xref="GeneID:6157186" CDS 1393075..1394169 /locus_tag="CMS_1330" /old_locus_tag="CMS1330" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710059.1" /db_xref="GI:170781727" /db_xref="GeneID:6157186" /translation="MPAQPVYERGLTIGSVPSRVAGGSGRMTRMSPSSRSTSQQVQFG SFGGVDVLEVVDIPRPSPGPGEVLVEVFAAGINHIEAYIRQGRFPDEVPTAFPNGQGS DFAGCIAAVGEGVTRFKKGQDVLGHTVMAAHATHVVVPAGNVVAKPAQLPWEVAGGLF LAGLVAHDVLHAITVGEGDTLVVTAAAGGVGSIEAQLAMRRGARVIGTCGERNFDYLR QIGVTPVVYGDGLADRIRAAAPNGVQGFVDNFGGGEHVAEELGVAGKRFSSSDDRRAI ELEAVLPPVEEDDVHRSRTLATVADLAAKREVDVLVSGFYPLSEVQHAFDDLERRHAR GKIVLGMRPVHYPGDRRSTAKARDVADGRA" misc_feature 1393213..1394097 /locus_tag="CMS_1330" /old_locus_tag="CMS1330" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 1.8e-41" gene complement(1394210..1394689) /locus_tag="CMS_1331" /old_locus_tag="CMS1331" /db_xref="GeneID:6157187" CDS complement(1394210..1394689) /locus_tag="CMS_1331" /old_locus_tag="CMS1331" /note="Contains leucine-rich repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710060.1" /db_xref="GI:170781728" /db_xref="GeneID:6157187" /translation="MSCIRFTTAAQLEALHRTAPAVLTAEQAAALHPAPEVTPSKIRR LRPLAEHRDPKVRESVASSLHAPLDVQRALARDADEGVRACLARNPHAPAAVLTMLVG DTSERVRSWLAVNDQTPRTAVAMLECDESPAVRDLLRWREAHIESPAEPEPAEVVAR" misc_feature complement(1394297..1394374) /locus_tag="CMS_1331" /old_locus_tag="CMS1331" /inference="protein motif:HMMPfam:PF01816" /note="HMMPfam hit to PF01816, Leucine rich repeat variant, score 5.9" misc_feature complement(1394375..1394452) /locus_tag="CMS_1331" /old_locus_tag="CMS1331" /inference="protein motif:HMMPfam:PF01816" /note="HMMPfam hit to PF01816, Leucine rich repeat variant, score 0.0027" misc_feature complement(1394453..1394530) /locus_tag="CMS_1331" /old_locus_tag="CMS1331" /inference="protein motif:HMMPfam:PF01816" /note="HMMPfam hit to PF01816, Leucine rich repeat variant, score 0.23" gene 1394730..1395764 /locus_tag="CMS_1332" /old_locus_tag="CMS1332" /db_xref="GeneID:6157188" CDS 1394730..1395764 /locus_tag="CMS_1332" /old_locus_tag="CMS1332" /note="Stop position appears to have been extended by IS insertion." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710061.1" /db_xref="GI:170781729" /db_xref="GeneID:6157188" /translation="MTAERPPEPPRGAHRDSGDVWVESPEGQRFWGAFGAAGLLVHDP DRGVLLQHRVAWSHHGGTWGLPGGARHAGESAIDGAAREAAEEAGVPPAGIRPVLATV LDLGFWSYTTVTARVLRPFEPRVADAESIELSWVPVDEVDARELHPGFGRAWPMLRGE LAREVTLVVDTANLLGSRPDGWWHDRAGSTTRLLVELDGLARDGLPAADLGLPGDVRW PEVVAVVEGHARDAALPSPAQDAAPPVLRAPGISVVAAPTDGDGEILTVVAAARDAGR DVVVVTADRGLVARVEELGARATGPGRIRALLDARADRDAALGVLGHDVGDTRAAGVS PWLEWIRSVL" misc_feature 1394826..1395209 /locus_tag="CMS_1332" /old_locus_tag="CMS1332" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 2.9e-19" gene complement(1395695..1396657) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /db_xref="GeneID:6157189" CDS complement(1395695..1396657) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710062.1" /db_xref="GI:170781730" /db_xref="GeneID:6157189" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1395707..1396249) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(1396334..1396399) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(1396399..1396520) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(1396520..1396585) /locus_tag="CMS_1333" /old_locus_tag="CMS1333" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(1396755..1398392) /locus_tag="CMS_1334" /old_locus_tag="CMS1334" /db_xref="GeneID:6157190" CDS complement(1396755..1398392) /locus_tag="CMS_1334" /old_locus_tag="CMS1334" /codon_start=1 /transl_table=11 /product="putative monophosphatase/phosphodiesterase bifunctional enzyme" /protein_id="YP_001710063.1" /db_xref="GI:170781731" /db_xref="GeneID:6157190" /translation="MTAATAHRGDSSRHRENTLTAIRSAAEAGARTIEVDVHVTRDGH VVLLHDDTLERLWGVDARIADLDLADARALGGGSSRIPLLAEALELLAGTDVELVIDM ASGDPAAAAHAVVAAAPRTPRVAWCGHLDGMRVIRELDPAAVIWLPWSDPQPPTADDL AELRPAVVNMPHLVVGRALVDAVHGLGARVAAWTVDEPAQMEWLASIGVDAITTNELT TLLEVLARRRADPAAADARATAPEAERTRARAAARDLAARAVHHVRSHAVGAVTTKAN PADHVTEIDRAVERDVRAVVGAQFPHHVLVGEEYGGEAVPGRPCWYLDPVDGTANLAN GVPWTSFSLALVVDGEPVVGVVADPWRGTVVEAAAGEGTWSADARLDLAATPGGVHAP DADPLRGRMVSTELAGHAPWPGMLPLLDALAARYCTTRIMGSGTLTVAGIALGHGAGA VIGSFGPVDHLAATLIVREAGGVVLDADGEDTLFPASGGVLAARHRRTAEALHTLWRA GVVDATSAALPSAEPTGSAPAEPAPAEPAPAEPAPAA" misc_feature complement(1396872..1397663) /locus_tag="CMS_1334" /old_locus_tag="CMS1334" /inference="protein motif:HMMPfam:PF00459" /note="HMMPfam hit to PF00459, Inositol monophosphatase,score 2.3e-46" misc_feature complement(1397736..1398374) /locus_tag="CMS_1334" /old_locus_tag="CMS1334" /inference="protein motif:HMMPfam:PF03009" /note="HMMPfam hit to PF03009, Glycerophosphoryl diester phosphodiesterase, score 3e-43" gene complement(1398389..1399624) /locus_tag="CMS_1335" /old_locus_tag="CMS1335" /db_xref="GeneID:6157191" CDS complement(1398389..1399624) /locus_tag="CMS_1335" /old_locus_tag="CMS1335" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001710064.1" /db_xref="GI:170781732" /db_xref="GeneID:6157191" /translation="MTASAPSPTIAAPSRPHDDGTATAAPSGLVVAGLAKDLGGRTIV DDLHLDVARGELVALLGPSGCGKTTTLRMIAGFLEPDRGSVVIGGRDVTASGPDKRPS AMVFQNYALWPHLTVFKNVAFPLTLRKLPKDEVARRVMAALETVNLAHHAHSRPAHIS GGEQQRAALARAIVQEPDLLFLDEPLSNLDAKLRVKVREEIRDIQQRLGITTVMVTHD QDEALAISDRVAVMHQGRIEQVSAPTELYARPRTLVVASFIGSINLLPAPRLQGTTPE TLTAVAPAAFVPTSADADVWAVRPEDVDYAPRGSQPAADATSVVVRRVLPHGHFQELV LDAGGVEVRALVTGSAPAIGEAGTVTLREVRHYRDGILVPDRAPGAAPVAPAAPAAPA APAATTASAPATSATDDAR" misc_feature complement(1398920..1399465) /locus_tag="CMS_1335" /old_locus_tag="CMS1335" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.3e-72" misc_feature complement(1399106..1399150) /locus_tag="CMS_1335" /old_locus_tag="CMS1335" /note="PS00211 ABC transporters family signature." misc_feature complement(1399421..1399444) /locus_tag="CMS_1335" /old_locus_tag="CMS1335" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1399632..1400447) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /db_xref="GeneID:6157192" CDS complement(1399632..1400447) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /codon_start=1 /transl_table=11 /product="putative inner membrane transport protein" /protein_id="YP_001710065.1" /db_xref="GI:170781733" /db_xref="GeneID:6157192" /translation="MRALLSVRGWIQAALFAVVAVFILGPLLWLAVHAFATSWDYPSL VPAGLTLDWWRVVFEDAELAAAVRNSLYFAPITVLVSALVCLPAAYAFSRFQFPGRRI LLVGLFATNAFPKMGLFVSMASLFYGLHLMNTITGIVIVQLIGTVVFMTWIPAAAFSA VPRSLEEAARDAGAGRVRTFLHVTLPLALPGILVAVLMSFLAAFDEAQGTYLVGAPVY MTMPTEMYSLVLNHPKQVAAVFAILLSVPSVALLLLARRHIMGGRLAEGFQIR" sig_peptide complement(1399632..1399739) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /note="Signal peptide predicted for CMS1336 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.605 between residues 36 and 37" misc_feature complement(1399653..1400261) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.6e-05" misc_feature complement(order(1399683..1399742,1399839..1399907, 1399965..1400033,1400076..1400144,1400169..1400237, 1400343..1400411)) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /note="6 probable transmembrane helices predicted for CMS1336 by TMHMM2.0 at aa 13-35, 71-93, 102-124, 139-161,181-203 and 236-255" misc_feature complement(1399890..1399976) /locus_tag="CMS_1336" /old_locus_tag="CMS1336" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1400447..1401277) /locus_tag="CMS_1337" /old_locus_tag="CMS1337" /db_xref="GeneID:6157193" CDS complement(1400447..1401277) /locus_tag="CMS_1337" /old_locus_tag="CMS1337" /codon_start=1 /transl_table=11 /product="putative inner membrane transport protein" /protein_id="YP_001710066.1" /db_xref="GI:170781734" /db_xref="GeneID:6157193" /translation="MFVGIPVVLAIGFSLGHTGGLNSTIAQIGLGTRTATSWWGTFDA YVDVFTDPRFLRDLGVTVLVTVVSTAIVIALSLAIALNLRLRGGRLASLFAGLAIVPL FIPVVIASWAILTFYSGDGFVRTVFALVGLEGPTWGYTTVAVVIGSVWTSLPFATLMA TSGVQGIPDAMIEAARDAGASTWAIVTRVLVPLAAIPLVIATTFTAIGVLGSFTVPYF TGPNAPSMLGVDISKYFTGFNHPQESIVMAVVVFVLASGIAFLYVRANFRSAKKEGRV" misc_feature complement(1400465..1401118) /locus_tag="CMS_1337" /old_locus_tag="CMS1337" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.4e-08" misc_feature complement(order(1400477..1400545,1400645..1400713, 1400804..1400872,1400930..1400998,1401035..1401103, 1401191..1401259)) /locus_tag="CMS_1337" /old_locus_tag="CMS1337" /note="6 probable transmembrane helices predicted for CMS1337 by TMHMM2.0 at aa 7-29, 59-81, 94-116, 136-158,189-211 and 245-267" misc_feature complement(1400702..1400788) /locus_tag="CMS_1337" /old_locus_tag="CMS1337" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1401397..1402563) /locus_tag="CMS_1338" /old_locus_tag="CMS1338" /db_xref="GeneID:6157194" CDS complement(1401397..1402563) /locus_tag="CMS_1338" /old_locus_tag="CMS1338" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001710067.1" /db_xref="GI:170781735" /db_xref="GeneID:6157194" /translation="MIPRRSLLALAAAASAAVALAGCAPTTSTQAQAQNHAVTDASGT ARVFISGDTNVKALWDDGIIPAFEKANPGASVTTTLDLHGEHDAQTMATLTSSVQGGS DPGYDLIDAGFTAAAGSGGLLAPVSADTIPNLATVPDSTVESGGGFGIPYRASSVLLA YDSTKVQTPPKTLADLLSWIRDNPGQFAYNSPSTGGSGQAFVTTVLDTHVDDATREKM TTGYDQSLESAWDAGFDELKDLNASMYQGGVYPNGNNQVLDLLGTGAIEMAPVWSDQV ITAQKSGTLPPTVKYAQISDPAFTGSASFLGIPKTAEHADVAQKLADYVLSAEGQGII ASTIAGYPVISLDQVPEDLKAQFASADPSTLRPGYYSKMASDMSNLWDQKVPGQ" misc_feature complement(1401568..1402545) /locus_tag="CMS_1338" /old_locus_tag="CMS1338" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 7.6e-10" misc_feature complement(1402495..1402527) /locus_tag="CMS_1338" /old_locus_tag="CMS1338" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1402991..1403789 /locus_tag="CMS_1339" /old_locus_tag="CMS1339" /pseudo /db_xref="GeneID:6157195" gene complement(1403796..1404614) /locus_tag="CMS_1341" /old_locus_tag="CMS1341" /db_xref="GeneID:6157196" CDS complement(1403796..1404614) /locus_tag="CMS_1341" /old_locus_tag="CMS1341" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710068.1" /db_xref="GI:170781736" /db_xref="GeneID:6157196" /translation="MLAAGWRGPAKKAPRPQDATRDLVVEELSTGFCGAIVRVESGMV VLEDFRRKQRTFPLGGSFLLEGEPVALRVARAAPAGRARTASGSLAVADAKARVALPS RIFVEGRHDAELVEKVWGEDLRIEGVVVEYLEGVDHLDEELDRFRPGRGRRVGVLVDH LVPGSKESRIAEAVARGPHRAHALVVGHPYVDVWQSVKPGRLGLREWPVIPRSVEWKH GICAALGWPHDEQADIARAWQRILGQVRSYQDLEPALLGRVEQLIDFVTDPAGR" gene complement(1404653..1404934) /locus_tag="CMS_1342" /old_locus_tag="CMS1342" /db_xref="GeneID:6157197" CDS complement(1404653..1404934) /locus_tag="CMS_1342" /old_locus_tag="CMS1342" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710069.1" /db_xref="GI:170781737" /db_xref="GeneID:6157197" /translation="MEIAVSRTGGVAGMTRTWSVRVDDDADGVADWSALVDACPWDEL VAPAPGADRFVYLVRAGDREARLGEAAVDGPWRRLVDRVRDASRESLGG" gene complement(1404935..1405981) /locus_tag="CMS_1343" /old_locus_tag="CMS1343" /db_xref="GeneID:6157198" CDS complement(1404935..1405981) /locus_tag="CMS_1343" /old_locus_tag="CMS1343" /codon_start=1 /transl_table=11 /product="putative metalloprotease" /protein_id="YP_001710070.1" /db_xref="GI:170781738" /db_xref="GeneID:6157198" /translation="MRRTILPPYLLTRLAEADPDRLSAARQAARRALRDQGPLIHDRR GPGAEPDASALADRDPSGIHRTVSDAGNREELPGRTVRVEGDADTGDAEVDEAYAGLG ATYALFSEVYGRESLDDRGLPLLATVHYGEEYDNAFWDGTRMVFGDGDGEVFAPFTRS LTVIGHELTHGVTELTLGLVYQGQSGALNESVSDVFGVLVEQHALGQTADEATWLVGA ELFLERSTGLALRSMRAPGTAYDDDVLGKDPQPGHMDDYVETQEDNGGVHINSGIPNR AFFLAATAIGGAAWEGAGRVWYDVIESGAVRADPDFAAFAGATVEAASARYGEDASEV AAVQAAWEGVGIEV" misc_feature complement(1404944..1405450) /locus_tag="CMS_1343" /old_locus_tag="CMS1343" /inference="protein motif:HMMPfam:PF02868" /note="HMMPfam hit to PF02868, Peptidase M4, thermolysin,score 2e-37" misc_feature complement(1405457..1405915) /locus_tag="CMS_1343" /old_locus_tag="CMS1343" /inference="protein motif:HMMPfam:PF01447" /note="HMMPfam hit to PF01447, Peptidase M4, thermolysin,score 1.3e-30" misc_feature complement(1405466..1405495) /locus_tag="CMS_1343" /old_locus_tag="CMS1343" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene complement(1406075..1406797) /locus_tag="CMS_1344" /old_locus_tag="CMS1344" /db_xref="GeneID:6157199" CDS complement(1406075..1406797) /locus_tag="CMS_1344" /old_locus_tag="CMS1344" /codon_start=1 /transl_table=11 /product="putative two-component response regulator" /protein_id="YP_001710071.1" /db_xref="GI:170781739" /db_xref="GeneID:6157199" /translation="MIRVLVVDDDTLTAEAHALYVGRLEGFEVAGVAHTGGEALRLVA EAGPEGIDLVLLDMTLPDMHGLEVCRRLRAAGRATDVVAVTAVRDQAVVRSSVTAGIV QYLIKPFTFAAFAEKMAAYVGYREGLGAGSGSTTQLQVDRALAALRSPASDARLPKGM SAETLDLVRGITRGDGAAPTASRRRRLGGGVSAAEVSGALDVSRVTARRYLEYLADVG QVERVPRYGTPGRPELGYRWTT" misc_feature complement(1406162..1406227) /locus_tag="CMS_1344" /old_locus_tag="CMS1344" /note="Predicted helix-turn-helix motif with score 1264.000, SD 3.49 at aa 191-212, sequence VSAAEVSGALDVSRVTARRYLE" misc_feature complement(1406420..1406794) /locus_tag="CMS_1344" /old_locus_tag="CMS1344" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 2.7e-28" gene complement(1406794..1408506) /locus_tag="CMS_1345" /old_locus_tag="CMS1345" /db_xref="GeneID:6157200" CDS complement(1406794..1408506) /locus_tag="CMS_1345" /old_locus_tag="CMS1345" /codon_start=1 /transl_table=11 /product="putative two-component sensor kinase" /protein_id="YP_001710072.1" /db_xref="GI:170781740" /db_xref="GeneID:6157200" /translation="MGLPRGIAARLLVVQLAILLLVALVATAALWSDSRQRAEQAAAD RSLAVATTVADSPRVAEGLASADPTGALLDYSLDVTRDTGVDFVTIMDRDTVRVTHPD PDEIGRRYLGTTGPALAGRSMTETFTGTLGPSVRAVVPVRDADGGIVGLVAAGVTVER VTEVLGAKIPGLVGTVAALALLLAAGAVLLSRSLERTTWGLGPEEMARMLAYYESVLH SVGEGIVLVDRDRRLVLHNDQAAELLDLELDPAAGPVGIRTLGLPPAIERLLVDGRTA DEVVHLPSGRVLVVTQRPALPTGRTGSAARLGTVTTLRDRTEIQRLSGELATLRTLSD AMRAQTHEFANRLHTIVSLIELERPREALDLAASELETDRRASEGGLAEDADPVVRAL VRGKTAQAAERGVALSVRVADGTGDPGVPATELVTIVGNLVDNAIDAAADPSAATARG DDRGRVELSLSRTDAGGLVVEVADDGPGVDPAVRPRVLEFGVTTKSGDAGPRGVGLAL VARSAARLGGRVEVGDADARLGGARVRVVLPADPVAHVADGVDADADADRDDADARDG GVRA" sig_peptide complement(1406794..1406883) /locus_tag="CMS_1345" /old_locus_tag="CMS1345" /note="Signal peptide predicted for CMS1345 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.248 between residues 30 and 31" misc_feature complement(1406884..1407249) /locus_tag="CMS_1345" /old_locus_tag="CMS1345" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1.5e-24" misc_feature complement(order(1407934..1408002,1408411..1408479)) /locus_tag="CMS_1345" /old_locus_tag="CMS1345" /note="2 probable transmembrane helices predicted for CMS1345 by TMHMM2.0 at aa 10-32 and 169-191" gene 1408714..1410099 /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /db_xref="GeneID:6157201" CDS 1408714..1410099 /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /codon_start=1 /transl_table=11 /product="putative sodium:dicarboxylate symporter" /protein_id="YP_001710073.1" /db_xref="GI:170781741" /db_xref="GeneID:6157201" /translation="MTNPIAALRRLDRQHYLYIAVIIAVLLGITVGLVAPDVGVALKP IGDAFVALIKMMIAPIISCTIVLGVGSVAKAATVGRVGGIALLYFIVMSTFALAIGLV VGNLIHPGDGLDLSGLRAPAGSTEATGETDFLLSIIPTSLLSSLTSGSILQTLFVALL VGFALQQLGKRGEPVLEGIRNIQILVFRILSMVMWVAPVGAFGAIAAVVGATGFQAVI SLATLMIGFYITCALFIVVVLGSLLWLVARISIFKLMRYLGREYLLIVSTSSSEVALP RLIAKMEHVGVSKPVVGITVPTGYSFNLDGTAIYLTMASLFIANALGSPLALGEQVSL LVFMIIASKGAAGVTGAGLATLAGGLQSHRPDLVDGVGLIVGIDRFMSEARALTNFTG NAVATLLVGTWTRGIDADRVALVLGGGDPFDEKSMGTEHEAELKAPAEALEADVTRAG DLGDEPRTSTR" sig_peptide 1408714..1408833 /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /note="Signal peptide predicted for CMS1346 by SignalP 2.0 HMM (Signal peptide probability 0.960) with cleavage site probability 0.832 between residues 40 and 41" misc_feature order(1408759..1408818,1408861..1408929,1408966..1409034, 1409140..1409208,1409269..1409337,1409380..1409448, 1409485..1409553,1409629..1409697,1409716..1409784) /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /note="9 probable transmembrane helices predicted for CMS1346 by TMHMM2.0 at aa 16-35, 50-72, 85-107, 143-165,186-208, 223-245, 258-280, 306-328 and 335-357" misc_feature 1408762..1409922 /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /inference="protein motif:HMMPfam:PF00375" /note="HMMPfam hit to PF00375, Sodium:dicarboxylate symporter, score 5e-109" misc_feature 1408843..1408890 /locus_tag="CMS_1346" /old_locus_tag="CMS1346" /note="PS00713 Sodium:dicarboxylate symporter family signature 1." gene 1410188..1410670 /locus_tag="CMS_1347" /old_locus_tag="CMS1347" /db_xref="GeneID:6157202" CDS 1410188..1410670 /locus_tag="CMS_1347" /old_locus_tag="CMS1347" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710074.1" /db_xref="GI:170781742" /db_xref="GeneID:6157202" /translation="MDGREEGHGATRVPEQYTSTDTTATFRDELGAALAGLDGAVSAE EKDAVTALPSGSALLVVRRGPNQGARFLLDADVTVAGRHPDADIFLDDVTVSRRHAEF VRQGTSFQVKDLGSLNGTYFDGVRIDTALLQDGAEVQVGKFRLTFYASRTDLVGRTAE" misc_feature 1410419..1410610 /locus_tag="CMS_1347" /old_locus_tag="CMS1347" /inference="protein motif:HMMPfam:PF00498" /note="HMMPfam hit to PF00498, Forkhead-associated, score 7.9e-17" gene 1410670..1411371 /locus_tag="CMS_1348" /old_locus_tag="CMS1348" /db_xref="GeneID:6157203" CDS 1410670..1411371 /locus_tag="CMS_1348" /old_locus_tag="CMS1348" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001710075.1" /db_xref="GI:170781743" /db_xref="GeneID:6157203" /translation="MPASAARSTPARTPGLLSIGQVLARLTPEFPDLTNSKVRFLEEQ GLVQPSRTESGYRKFSPADVERLRTVLGMQRDHYLPLKVIRSYLHDLDAGLSPALPGG APVPSVSMLDQERRYSRAELVRESGATASLLGDAITAGVLMPAEAYGEEALQVMRALV ELQRTGIEPRHLRGFRQAAERELSLIESALVPVSRRRDASSRAHAAELAREIATQLEV VRGSLIRSALGRLSS" misc_feature 1410721..1410846 /locus_tag="CMS_1348" /old_locus_tag="CMS1348" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 1.1e-05" gene 1411624..1412181 /locus_tag="CMS_1349" /old_locus_tag="CMS1349" /db_xref="GeneID:6157204" CDS 1411624..1412181 /locus_tag="CMS_1349" /old_locus_tag="CMS1349" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710076.1" /db_xref="GI:170781744" /db_xref="GeneID:6157204" /translation="MEGRTMSDSTPDSGRYDLGLLFTDGLPEMDASAGYRGAVAARAA GITYRQLDYWARTGLVEPTVRGASGSGTQRLYGFRDILVLKLVKRLLDTGISLQQIRT AVNQLRESGVVDLAQTTLMSDGASVYLCTSNDEVIDLVSRGQGVFGIAVGKVLREVEH SLVEIDTQTVDPTDELAARRAVKAS" gene complement(1412377..1413153) /locus_tag="CMS_1350" /old_locus_tag="CMS1350" /db_xref="GeneID:6157205" CDS complement(1412377..1413153) /locus_tag="CMS_1350" /old_locus_tag="CMS1350" /codon_start=1 /transl_table=11 /product="putative chromosome partitioning protein" /protein_id="YP_001710077.1" /db_xref="GI:170781745" /db_xref="GeneID:6157205" /translation="MGKTTVTLGLASAAFSRGLRTLVVDLDPQADVSTGMDIQVAGHL NVADVLASPKEKIVRAAIAPSGWTKGRSGTIDVMIGSPSAINFDGPHPSIRDIWKLEE ALANVEADYDLVLIDCAPSLNALTRTAWAASDRVTVVTEPGLFSVAAADRALRAIEEI RRGLSPRLQPLGIIVNRARVQSLEHQFRIKELRDMFGPLVLSPQLPERTSLQQAQGAA KPLHVWPGESAQEMARNFDQLLERIMRTAKIGDYAENAAR" misc_feature complement(1412515..1413150) /locus_tag="CMS_1350" /old_locus_tag="CMS1350" /inference="protein motif:HMMPfam:PF01656" /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide synthase, score 2e-25" gene 1413268..1416669 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /db_xref="GeneID:6157206" CDS 1413268..1416669 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /EC_number="6.4.1.1" /note="biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase" /protein_id="YP_001710078.1" /db_xref="GI:170781746" /db_xref="GeneID:6157206" /translation="MFEKILVANRGEIAIRAFRAAVELGARTVAVYPHEDRHSQHRLK ADEAYLNREEGHPVRAYLDVDEIIRVALECGADAIYPGYGFLSENPDLARAAAANGIV FIGPDAGVLEMAGNKVTAKEHATAAGVPVLASTPPSTDVGLLLEQAEGIGFPIFAKAV AGGGGRGMRRVERPEDLEEALRAAMREADSAFGDPTMFLEQAVLRPRHIEVQILADAT GETVHLFERDCSVQRRHQKVVEIAPAPNLDPAIRDAMHAHAVAFARSIGYVNAGTVEF LLDTDGPRAGQHVFIEMNPRIQVEHTVTEEVTDVDLVQSQMRIAAGESLAELGLRQDA IVLRGAALQCRITTEDPAQGFRPDTGKITTYRSPGGGGIRIDGGTVATGAQISPHFDS MLAKLTCCGRDFPAAVTRAKRALAEFRIRGVSTNIPFLQGVLDDPDFQAGDISTSFID ERPGLVRSNVSKDRGTKILNWLADVTVNQPNGPRTAVVRPADKLPDVDLRLPAPAGSR QRLLELGPRGFADALRAQTALAVTETTFRDAHQSLLATRVRTRDLVAVAPYVARTTPE LLSVEAWGGATYDVALRFLGEDPWERLASLREALPNVAIQMLLRGANTVGYTPYPTEV TDAFVQEAAATGVDVFRIFDALNDVERMRPAIDSVLATGTTVAEVALCYTGNLLDPAE DLYTLDYYLRLAERSVAAGAHILAIKDMAGLLRPAAAERLVTALRREFDLPVHVHTHD TAGGQLATLLAASRAGADAVDVASAPMSGTTSQPSASALVAALADTERDTGLSLDAVS DLEPYWEAVRRLYRPFESGLAGPTGRVYRHEIPGGQLSNLRQQAIALGLADDFELIEE MYAAADRILGRIPKVTPSSKVVGDLALQLAAAKADPADFERNPQDYDIPDSVVGFMAG ELGDLPGGWPEPFRTRVLQGRDVRIGVTPLSAEDRAALQVPGAARRRTLNHLLFPQST EQFETIRELFGDLSVLDTDDYLHGLRPGQEHAVRISRGVEVLIGLEAVGDADESGMRT VMVVMNGQLRPVFVRDRGIAVPTTAAERGDPAKPGHVSAPFSGVVTLKVEEGQVVAAG QPVASIEAMKMEAAITSPVAGRVARLAVPTTQQVDAGDLLVVVEQ" misc_feature 1413268..1413609 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF00289" /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 6.9e-36" misc_feature 1413613..1414275 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF02786" /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain, ATP-binding, score 2e-88" misc_feature 1414135..1414158 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /note="PS00867 Carbamoyl-phosphate synthase subdomain signature 2." misc_feature 1414294..1414617 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF02785" /note="HMMPfam hit to PF02785, Biotin carboxylase,C-terminal, score 1.9e-63" misc_feature 1414876..1415697 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF00682" /note="HMMPfam hit to PF00682, HMG-CoA lyase-like, score 7.6e-19" misc_feature 1415740..1416339 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF02436" /note="HMMPfam hit to PF02436, Conserved carboxylase region, score 1.4e-67" misc_feature 1416460..1416660 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /inference="protein motif:HMMPfam:PF00364" /note="HMMPfam hit to PF00364, Biotin/lipoyl attachment,score 9.7e-15" misc_feature 1416529..1416582 /gene="pyc" /locus_tag="CMS_1351" /old_locus_tag="CMS1351" /note="PS00188 Biotin-requiring enzymes attachment site." gene 1416673..1418145 /locus_tag="CMS_1352" /old_locus_tag="CMS1352" /db_xref="GeneID:6158905" CDS 1416673..1418145 /locus_tag="CMS_1352" /old_locus_tag="CMS1352" /codon_start=1 /transl_table=11 /product="putative nucleotide-disulphide oxidoreductase" /protein_id="YP_001710079.1" /db_xref="GI:170781747" /db_xref="GeneID:6158905" /translation="MSHEMTDTPQDQRYDLVIVGAGSGNSIVDERFADQRVLLVDDGE HFGGTCLNAGCIPTKMLVHVADVAAGTQDGAALGIRASVDAVDWPAISARVFGRIDAI SEGGREWRESGSENVTLLRESVGFESPGVLVSASGQRIVADRVVLAAGSRPRPLQAVY APDPAIHDSDSIMRIAQLPTSLLIVGGGYVAAEFAHVFSHLGVHVTQVARSAHLLGNL DADVSTRFTTLARTQWDVITDCEVEEIERDGDVLRSRLASGHLVETEAVLVALGRVPN TDTLAVANAGYDLHDDGRIVVDDRQRVLAGGEPVPGVFALGDISADHQLKHVANHQAR VVQHNLLHPEDLIGGAPGPAPQAVFSRPQIGSFGLTEAEARAAGPVVTVEQPYSSTAW GWALEDTTSFCKLVVDPRDGGTLLGAHIIGSDSAALIQPLLMAASLGHPVTGLARAQY WPHPAVTEIVENALLAAESAVADWARENGGGDAPAGAGRS" misc_feature 1416715..1417656 /locus_tag="CMS_1352" /old_locus_tag="CMS1352" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 2.2e-56" misc_feature 1416811..1416843 /locus_tag="CMS_1352" /old_locus_tag="CMS1352" /note="PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site." misc_feature 1417732..1418064 /locus_tag="CMS_1352" /old_locus_tag="CMS1352" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 1.8e-23" gene 1418180..1418671 /locus_tag="CMS_1353" /old_locus_tag="CMS1353" /db_xref="GeneID:6157207" CDS 1418180..1418671 /locus_tag="CMS_1353" /old_locus_tag="CMS1353" /EC_number="3.5.1.88" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="YP_001710080.1" /db_xref="GI:170781748" /db_xref="GeneID:6157207" /translation="MTERQIRLFGDPVLKTVSSEIHEIDDGVRALVEDLLDSVRPDGR AGVAAAQIGVNLRAFSYNVGPAFGYVLNPVIEELRGEAVLVDEGCLSVPGLWFPTMRH PEAVISGLDLDGKPVRIEGTGVLAQAFQHEVDHLDGLVYLDRLDKQRRREAMKQVRES DWF" misc_feature 1418186..1418632 /locus_tag="CMS_1353" /old_locus_tag="CMS1353" /inference="protein motif:HMMPfam:PF01327" /note="HMMPfam hit to PF01327, Formylmethionine deformylase, score 1.1e-36" gene complement(1418715..1420541) /locus_tag="CMS_1354" /old_locus_tag="CMS1354" /db_xref="GeneID:6157208" CDS complement(1418715..1420541) /locus_tag="CMS_1354" /old_locus_tag="CMS1354" /codon_start=1 /transl_table=11 /product="putative long chain fatty acid CoA ligase" /protein_id="YP_001710081.1" /db_xref="GI:170781749" /db_xref="GeneID:6157208" /translation="MEQHTMPAVVEARPDDNITDVLVHRVRTSPDAPLFALPDGDGGW SDVSAAEFHRQVVALAKGLVSAGIEPGERIGMMCRTRYEWTLVDFAVFFAGAVLVPVY ETSSPGQVHWNMQDSGAVAMILESADHFARFDEVHPELPAVRRVWQIDLGDLGKPAEQ GVDVPDAEIERRRNIAVGSDMATLIYTSGTTGRPKGCILTHANFVELSRNAEVAMEEV VQVGASTLLFITTAHVFARFISILNVQAGVKTGHQADTMQLLPALASFKPTFLLAVPR VFEKVYNSSEQKAEGAGRGKVFRKAAEVAYAHSVAVDAGSVPLALKLQYKLFDALVYS KIRQAMGGRVRFAVSGSAPLGLRLGHFYRSLGLTILEGYGLTETTAPVSVNLVKGFRI GTVGPALPGVSTRITDDGEIEVKGVNVFDGYWQDEEATAAVFDDGWFRTGDLGSYDAD GYLTITGRKKEIIVTAGGKNVAPAALEDPIRANPLVGQVVVAGDRRPFISALITLDPE MLKVWLGNNGQDPSMTLEQASQNPAVLAEVQRAVDAANATVSRAESIRKFVVLPVELT EAAGHLTPKLSIKRQVVLDAFADVITRIYEAAPTTEGHSLVH" misc_feature complement(1419069..1420400) /locus_tag="CMS_1354" /old_locus_tag="CMS1354" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 1.3e-81" misc_feature complement(1419957..1419992) /locus_tag="CMS_1354" /old_locus_tag="CMS1354" /note="PS00455 Putative AMP-binding domain signature." gene 1420674..1421639 /locus_tag="CMS_1355" /old_locus_tag="CMS1355" /db_xref="GeneID:6157209" CDS 1420674..1421639 /locus_tag="CMS_1355" /old_locus_tag="CMS1355" /codon_start=1 /transl_table=11 /product="ROK family regulator" /protein_id="YP_001710082.1" /db_xref="GI:170781750" /db_xref="GeneID:6157209" /translation="MHAIGIDIGGTKIAGAVVDELGVIAAEERTPTEAGSPDAIVEAV VGMVEWLRAQHPDVVAVGVAAAGFIDAAQSTVYYAPNINWRNEPVREKLRGRIDLPIV IENDANAAGWAEFRYGAGRLVSDMVTLTIGTGVGGAIVADDRLFRGGFGAGAELGHMR VVPDGLPCGCGARGCIEQYGSGRALLRTADELADLGGTHGEGLAARRREVGALTGHDV SDLIQAGDPGALLALRRLGGWLGEAAASIGAILDPQMFVIGGGVAQAGDLLLDPIREA YLAHLPARGYHPEPEFRIAELVNDAGVVGAADLARLHAAALTHGA" misc_feature 1420686..1421228 /locus_tag="CMS_1355" /old_locus_tag="CMS1355" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 2.8e-64" misc_feature 1421064..1421147 /locus_tag="CMS_1355" /old_locus_tag="CMS1355" /note="PS01125 ROK family signature." gene 1421720..1422409 /locus_tag="CMS_1356" /old_locus_tag="CMS1356" /db_xref="GeneID:6157210" CDS 1421720..1422409 /locus_tag="CMS_1356" /old_locus_tag="CMS1356" /codon_start=1 /transl_table=11 /product="putative phospholipid/glycerol acyltransferase" /protein_id="YP_001710083.1" /db_xref="GI:170781751" /db_xref="GeneID:6157210" /translation="MFYWFMKNLVAGPLLRSTFRPWVTGIENIPAKGGVILASNHLSF IDSVFLPLLVDRNLVFLAKSDYFTGTGLKGWATKMFFTATGMLPIDRSGGKASEASLN TGLRVLAEGRMLGIYPEGTRSPDGRMYRGRTGVARMILEGDVPVVPIAMIDTEKIMPI GTRIPKVRRIGVVIGEPLDFSRFAGLEGDRFILRSITDEIMYELSRLSGQEYVDVYAT SVKEKRASASR" misc_feature 1421777..1422175 /locus_tag="CMS_1356" /old_locus_tag="CMS1356" /inference="protein motif:HMMPfam:PF01553" /note="HMMPfam hit to PF01553, Phospholipid/glycerol acyltransferase, score 1e-32" gene 1422469..1423839 /gene="aroH" /locus_tag="CMS_1357" /old_locus_tag="CMS1357" /db_xref="GeneID:6157211" CDS 1422469..1423839 /gene="aroH" /locus_tag="CMS_1357" /old_locus_tag="CMS1357" /EC_number="2.5.1.54" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="YP_001710084.1" /db_xref="GI:170781752" /db_xref="GeneID:6157211" /translation="MASEHLVPAHPDVLAGLDHWRTLEVKQQPQWPDAAAVHAASAEI ALLPPLVFAGEVDLLRSRLAAAADGRAFLLQGGDCAETFAGATADAIRNRVKTVLQMA VVLTYGAAMPVVKMGRMAGQFAKPRSSDTETRGDLTLPAYRGDIVNGYDFTPESRAAD PARLVKGYHTAASTLNLIRAFTQGGFADLREVHSWNKGFAANPANQRYEQLARDIDRA IKFMEAAGADFDDLKRVEFYTGHEGLLMDYERPMTRIDSRTGTPYNTSAHFIWIGERT RELDGAHVDFLSRVRNPLGVKLGPSTTPETVHKLIEKLDPEREPGRLTFITRMGAGRI RDALPPLLEAVKASDANPLWVTDPMHGNGLTTPTGYKTRRFDDVVDEVQGFFQAHRAA GTHPGGIHIELTGDDVTECLGGSEHIDEATLATRYESLCDPRLNHMQSLELAFLVAEE LAAARS" misc_feature 1422508..1423812 /gene="aroH" /locus_tag="CMS_1357" /old_locus_tag="CMS1357" /inference="protein motif:HMMPfam:PF01474" /note="HMMPfam hit to PF01474, DAHP synthetase, class II,score 7.3e-246" gene 1424001..1425293 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /db_xref="GeneID:6158610" CDS 1424001..1425293 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001710085.1" /db_xref="GI:170781753" /db_xref="GeneID:6158610" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATVTGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 1424049..1424072 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1424127..1424192 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature 1424814..1425272 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature 1425111..1425161 /locus_tag="CMS_1358" /old_locus_tag="CMS1358" /note="PS01043 Transposases, IS30 family, signature." gene complement(1425369..1427294) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /db_xref="GeneID:6157212" CDS complement(1425369..1427294) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /codon_start=1 /transl_table=11 /product="putative serine/threonine protein kinase" /protein_id="YP_001710086.1" /db_xref="GI:170781754" /db_xref="GeneID:6157212" /translation="MIGRLLDGRYQVRSRIARGGMATVYVATDLRLERRVAVKVMHGH LADDSAFRDRFIQEARSAARLAHPNVVNVFDQGQDSDMAYLVMEYLPGMTLRELLQEY ERLTPEQTLDILEAVLSGLAAAHKAGIVHRDLKPENVLLADDGRIKIGDFGLARAVSA NTATGQALLGTIAYLSPELVTRGIADTRSDIYAVGIMMYEMLAGEQPFKGEQPMQIAY QHANDQVPTPSTANASVPVELDELVLWATARDPEQRPRDARALLDELYAVQNRLDARS GDPAPLQRTVVFPSAPALPPVTTGETQVVGGPLVMTRQETERTEPESVVALAAAGSRR RSRGWMLALLVVMLAAVAGGTGWYYGQGPGARAPVPSVTAMAVDDAAGTLQGQGFVVA RAEEPSVDVEVGHVTRSVPASGTPVDQGSTVTVYASTGPRLLDVPDVVGAAEADARTR LEGVPFVVQEATVRQYGDAAEGTVVQVLDSSGAPVGAQYPEQQTVTLVVAAGKIPQVN GRSVDQAKATLGQAGLVGEPGKQSFSDDVDAGEVISVYALDQNPVRSGLGDAPGSKVG LEISKGPDLVAVPKVVGLTRDGAKAELDKAGFKYAYSAFWDALPDSITKVASATPDAG AMVRRGSTVNLGITASG" misc_feature complement(1425381..1425575) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 0.032" misc_feature complement(1425582..1425797) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 0.027" misc_feature complement(1426008..1426202) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 1.6e-08" misc_feature complement(1426215..1426283) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /note="1 probable transmembrane helix predicted for CMS1359 by TMHMM2.0 at aa 338-360" misc_feature complement(1426500..1427267) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 5e-56" misc_feature complement(1426872..1426910) /locus_tag="CMS_1359" /old_locus_tag="CMS1359" /note="PS00108 Serine/Threonine protein kinases active-site signature." gene complement(1427401..1428681) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /db_xref="GeneID:6157213" CDS complement(1427401..1428681) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /codon_start=1 /transl_table=11 /product="putative peptidoglycan-binding protein" /protein_id="YP_001710087.1" /db_xref="GI:170781755" /db_xref="GeneID:6157213" /translation="MPMTEPTSPRDPSRSSDTATGRSANRRSKALLATMPIVLVGSLA VSLGMATPAEAAPVKRVPKAKSGPTQTKLPRVAAPTAAPAAAPTVAAPSTYVVEQGDT VSSIAGQFGLSTASVLAQNGLGWKTTIFPGQTLTLGGSGSGSSTAAPVAAPTGSSASY TVVAGDTVTGIAGKHGVSTSSVLQANGLQATSTIFPGNRLTIPGAGSSAAPATPATPT SASPAAKQGLSGTYTIATGDTLHSIATKSGVTVQDLLNANGLNWSSIIYAGSKLTIPH ASTAVVQVASLDGTTIMTDEMRSNARVIVQVGRSAGVSDYGLVIALATAAQESTLRNL DWGDRDSIGLFQQRPSQGWGQPAQLNDPVYAARAFFGGSVNPNPGATRGLLDIAGWKS MTVTQAAQAVQYSAYPDAYAKWEASAWAWLDEIG" sig_peptide complement(1427401..1427565) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /note="Signal peptide predicted for CMS1360 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.991 between residues 55 and 56" misc_feature complement(1427857..1427988) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /inference="protein motif:HMMPfam:PF01476" /note="HMMPfam hit to PF01476, Peptidoglycan-binding LysM,score 8.6e-13" misc_feature complement(1428073..1428204) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /inference="protein motif:HMMPfam:PF01476" /note="HMMPfam hit to PF01476, Peptidoglycan-binding LysM,score 2.7e-13" misc_feature complement(1428268..1428399) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /inference="protein motif:HMMPfam:PF01476" /note="HMMPfam hit to PF01476, Peptidoglycan-binding LysM,score 1.1e-09" misc_feature complement(1428526..1428594) /locus_tag="CMS_1360" /old_locus_tag="CMS1360" /note="1 probable transmembrane helix predicted for CMS1360 by TMHMM2.0 at aa 30-52" gene 1428924..1429235 /locus_tag="CMS_1361" /old_locus_tag="CMS1361" /db_xref="GeneID:6157214" CDS 1428924..1429235 /locus_tag="CMS_1361" /old_locus_tag="CMS1361" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710088.1" /db_xref="GI:170781756" /db_xref="GeneID:6157214" /translation="MTVPDLVDLLGLTVSRVRRLIEDRRLLAVRLDGVLKVPAVFLRD GEPLSELRGTVIVLGDNGFTDEEAMHWLLTEEPSLGAAPVDALLAGRKAEVRRVAQAS A" misc_feature 1428924..1428989 /locus_tag="CMS_1361" /old_locus_tag="CMS1361" /note="Predicted helix-turn-helix motif with score 1421.000, SD 4.03 at aa 1-22, sequence MTVPDLVDLLGLTVSRVRRLIE" gene complement(1429288..1430409) /locus_tag="CMS_1362" /old_locus_tag="CMS1362" /db_xref="GeneID:6157215" CDS complement(1429288..1430409) /locus_tag="CMS_1362" /old_locus_tag="CMS1362" /codon_start=1 /transl_table=11 /product="putative polyprenyl synthetase" /protein_id="YP_001710089.1" /db_xref="GI:170781757" /db_xref="GeneID:6157215" /translation="MPESDRLVSHVQTRLDDFLTAQAAGLREISPDLVPIQEFSSDLL RGGKRFRAQFCYWGWRSVIDLEPSPAGRPQGEERPGYRAVVGVAAGLEIFHAAALIHD DIIDRSDTRRGRPAAHRRFEALHAASGWGGSSAGFGEAGATLLGDLLLGWSDELLIDS LLALADGSAARATRAELATMRTQVTLGQYLDVLEEVAWPTVPEDDTLARAHNVIVYKS AKYSIEAPLVVGASLAGATPEQVAALRAVGLPLGIAFQLRDDVLGVFGDSAVTGKPSG DDLREGKRTVLIALARRRLPDGVRRTVDALLGDADLDDEQIRALQSVLRESGALDEVE GMIARYVRESLAALRDAPIGARARNQLELLVDSVTRRVT" misc_feature complement(1429396..1430307) /locus_tag="CMS_1362" /old_locus_tag="CMS1362" /inference="protein motif:HMMPfam:PF00348" /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score 3.9e-24" misc_feature complement(1429621..1429659) /locus_tag="CMS_1362" /old_locus_tag="CMS1362" /note="PS00444 Polyprenyl synthetases signature 2." misc_feature complement(1430071..1430115) /locus_tag="CMS_1362" /old_locus_tag="CMS1362" /note="PS00723 Polyprenyl synthetases signature 1." gene 1430487..1430882 /locus_tag="CMS_1363" /old_locus_tag="CMS1363" /db_xref="GeneID:6157216" CDS 1430487..1430882 /locus_tag="CMS_1363" /old_locus_tag="CMS1363" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710090.1" /db_xref="GI:170781758" /db_xref="GeneID:6157216" /translation="MMPLSEQEQRLLEEMERSLYRNDADFVATVSGRRSRPNYTMVVV GVLVIVLGIAALAAGVITKLAIIGILGFAIPIIGALLIFSPRDAAADASAPTPPRAAG RGPGKRPASSSSFMDRINERWEKRQGGQD" misc_feature order(1430601..1430669,1430679..1430738) /locus_tag="CMS_1363" /old_locus_tag="CMS1363" /note="2 probable transmembrane helices predicted for CMS1363 by TMHMM2.0 at aa 39-61 and 65-84" gene 1431221..1431652 /gene="mraZ" /locus_tag="CMS_1364" /old_locus_tag="CMS1364" /db_xref="GeneID:6157217" CDS 1431221..1431652 /gene="mraZ" /locus_tag="CMS_1364" /old_locus_tag="CMS1364" /note="MraZ; UPF0040; crystal structure shows similarity to AbrB" /codon_start=1 /transl_table=11 /product="cell division protein MraZ" /protein_id="YP_001710091.1" /db_xref="GI:170781759" /db_xref="GeneID:6157217" /translation="MFLGTHSPRLDDKGRLILPAKFRDELEGGVVMTRGQDRCIYVFT TREFEELHDRMRQAPLASKQARDYMRVFLSGANAETPDKQHRITIPQALRTYAGLDRE LAVIGAGSRVEIWDAGTWDEYLTANESAFADTAEEVIPGLF" misc_feature 1431221..1431433 /gene="mraZ" /locus_tag="CMS_1364" /old_locus_tag="CMS1364" /inference="protein motif:HMMPfam:PF02381" /note="HMMPfam hit to PF02381, Protein of unknown function UPF0040, score 2.6e-20" misc_feature 1431434..1431643 /gene="mraZ" /locus_tag="CMS_1364" /old_locus_tag="CMS1364" /inference="protein motif:HMMPfam:PF02381" /note="HMMPfam hit to PF02381, Protein of unknown function UPF0040, score 6.2e-14" gene 1431756..1432712 /gene="mraW" /locus_tag="CMS_1365" /old_locus_tag="CMS1365" /db_xref="GeneID:6158823" CDS 1431756..1432712 /gene="mraW" /locus_tag="CMS_1365" /old_locus_tag="CMS1365" /EC_number="2.1.1.-" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /protein_id="YP_001710092.1" /db_xref="GI:170781760" /db_xref="GeneID:6158823" /translation="MALDDIHTPVLLERCLELLAPALQGEGAVLVDATLGMAGHSEAF LDALPGLRLVGLDRDPDALAIAGERLARFGDRVHLVHTVYDGIGRALDGLGIGEVQGV FFDLGVSSLQLDRVERGFSYSQDAPLDMRMDGTAGLTAAQVVAEYDELELRRIFYDYG EEKLAPRYASRIVQAREVEPITTSARLVEIIQQATPAAVQRAGHPAKRVFQALRIEVN QELSVLARAMPAAIDRLAVGGRVVVESYQSLEDRIVKRELRVRSTSTAPVGLPVELPE HRPELKLLVRGAELADQHEIAQNPRAASVRLRAAERARRRHA" misc_feature 1431768..1432694 /gene="mraW" /locus_tag="CMS_1365" /old_locus_tag="CMS1365" /inference="protein motif:HMMPfam:PF01795" /note="HMMPfam hit to PF01795, Bacterial methyltransferase, score 2.1e-137" gene 1432709..1433383 /locus_tag="CMS_1366" /old_locus_tag="CMS1366" /db_xref="GeneID:6158821" CDS 1432709..1433383 /locus_tag="CMS_1366" /old_locus_tag="CMS1366" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710093.1" /db_xref="GI:170781761" /db_xref="GeneID:6158821" /translation="MTDAARATARPRIRPSAEPPTRHIEVVATRGQRRARPRTVYAVI VVGGLFVVLLAQLLLSIGLSDGAYAIQSLQQQQKELDRTHQALTEDVDRLSSPQNLAR NAQALGMVASASPSFLSLDGTIQGTPQAKDGATTALTADTLIGNSLLSGVPLTIESDP AKRAAALQAATAQDGAAAVDPGSAIPGSAESAGGVTAGTPSAPPVSGAASGLASATAI PTPQTR" misc_feature 1432826..1432894 /locus_tag="CMS_1366" /old_locus_tag="CMS1366" /note="1 probable transmembrane helix predicted for CMS1366 by TMHMM2.0 at aa 40-62" gene 1433548..1435257 /locus_tag="CMS_1367" /old_locus_tag="CMS1367" /db_xref="GeneID:6157218" CDS 1433548..1435257 /locus_tag="CMS_1367" /old_locus_tag="CMS1367" /codon_start=1 /transl_table=11 /product="penicillin binding protein" /protein_id="YP_001710094.1" /db_xref="GI:170781762" /db_xref="GeneID:6157218" /translation="MVKLIDIQVVQATELNEEALGKRAISQTLPGVRGSIYDADGKVL ADSVLRYDVTMDPSKAGDFTRTVTGDDGKPVKQDVSLADAEAQLGAITGQKPEEIDGL ITGALAKDPKSLFGYVTKGVDVDAYLAIRDLKIPWIYFQAVSSRTYPNGQIAGSILGY IAGDGTVKAGLEQEYDSCLAAQDGAQTYERGADGVPIAGSTVTQKPAVDGSDVMTNID TDLEYFAQTAVAEQAVKVGADYGHATIVEVKTGKVLAVAEYPSVDPNDVSATKPEDRG SRAFSSPFEPGSTLKAVTAAALLDSGKADAGTHVVAPYTFTRPNVKLSDSYVHPDLHF TLAGVLMDSSNTGISALGERLSASDRYDYLKAFGVGEKTAIDFPGESSGLVRPWQEWD PQTNYATMFGQGLTTTALQVASIYQTIGNHGVKLPLSLVSGCKAADGTVTDQPDTTGT QVISPQAADSTVNMLETVVTDGHLSKDLTIPGYRVAAKSGTAQVAEADGKYGKNYLVS IAGLAPAEDPQYVVSISLANPDTMKSSAAAAPVFQKIMSQVLKTYRVPPSSVPSPNLP TTY" misc_feature 1433629..1434150 /locus_tag="CMS_1367" /old_locus_tag="CMS1367" /inference="protein motif:HMMPfam:PF03717" /note="HMMPfam hit to PF03717, Penicillin-binding protein,dimerisation domain, score 2.2e-30" misc_feature 1434268..1435188 /locus_tag="CMS_1367" /old_locus_tag="CMS1367" /inference="protein motif:HMMPfam:PF00905" /note="HMMPfam hit to PF00905, Penicillin-binding protein,transpeptidase, score 6.2e-80" gene 1435270..1436814 /gene="murE" /locus_tag="CMS_1368" /old_locus_tag="CMS1368" /db_xref="GeneID:6157219" CDS 1435270..1436814 /gene="murE" /locus_tag="CMS_1368" /old_locus_tag="CMS1368" /EC_number="6.3.2.13" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /protein_id="YP_001710095.1" /db_xref="GI:170781763" /db_xref="GeneID:6157219" /translation="MTFPATPALRPEHPVARSLSGLVSDFALDVVGDVDDVEVTGVTL SSSDVQPGDLYVGLRGVRVHGARFASDAAASGAVAVLTDPDGLAEARDSGLPVILTPD PRAALGDIAAWVHRSAENPATLYGVTGTNGKTSVVYLLDGLLRQLGVVTGLTSTAERR IGEESITSRLTTPEASELHALLARMREAEVRAVTIEVSAQALTRHRVDGLVFDVAAFI NLSHDHLDDYADFEEYFEAKAAFFDPDRARRGVVSLDTVWGQRIVEQSRIPMTTISAQ PGIEADWRVTVLEQTPDSTGFRLEGPDNRVLVSSVPVPGWFMAANAGLAIVMLVESGY DLDAVAHVLDRDGGIQAYIPGRAERVSGDTGPLFFVDYGHTPDAFEQTLQALRPFTPG KLVMVFGADGDRDTTKRAEMGAIAARLADVVVITDYHPRYEDPASIRASLIAGARAAV PDREIHEVPDPATAIRTAVSLVGEGDTILVAGPGHEDYHEVAGKKIPFSARDDARAAL RDAGWS" misc_feature 1435420..1436289 /gene="murE" /locus_tag="CMS_1368" /old_locus_tag="CMS1368" /inference="protein motif:HMMPfam:PF01225" /note="HMMPfam hit to PF01225, Cytoplasmic peptidoglycan synthetase, N-terminal, score 3.7e-43" misc_feature 1436326..1436592 /gene="murE" /locus_tag="CMS_1368" /old_locus_tag="CMS1368" /inference="protein motif:HMMPfam:PF02875" /note="HMMPfam hit to PF02875, Cytoplasmic peptidoglycan synthetases, C-terminal, score 2.8e-28" gene 1436771..1438225 /gene="murF" /locus_tag="CMS_1369" /old_locus_tag="CMS1369" /db_xref="GeneID:6158832" CDS 1436771..1438225 /gene="murF" /locus_tag="CMS_1369" /old_locus_tag="CMS1369" /EC_number="6.3.2.10" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-alanyl ligase" /protein_id="YP_001710096.1" /db_xref="GI:170781764" /db_xref="GeneID:6158832" /translation="MTTRARPSATQAGADMIALTLAEIAEAVDGRLLLRGDATAQTVV DGVVDTDSRLIGPGGIFVAKPGEETDGHLFAPWAVEAGAALLLVERELDLPVPQVLVP DVVDALGRLAHEVVARVRALGELRMVAVTGSNGKTTTKNLLHAILETQGETVSPVASF NNEVGAPLTMLKVTRSTRFLVAEMGASGLGEITRLIRMAKPDVGIVLTVGLAHAGGFG GIERTLVTKTEMVKDLLPEDTAVLNADDPRVASMSDKTQAPVLWFGRDARAAVRATDI VASAAGTTFTLHLPDGSTRPVSFRVLGEHHVTNALAAAAGAWALGVDGDAIVSALQTV QRAERWRMEVLGGNGVTVINDAYNASPDSMAAALRTLAQIRGPEQRTVAVLGEMSELG EFSEEEHDRVGLLAVRLNIGQLVVVGRPARRLHLEAIGQGSWDGESIFAEDAAEAREI LDGILRDGDLVLVKSSNSAGLRFLGDELGEKYSW" misc_feature 1436939..1437754 /gene="murF" /locus_tag="CMS_1369" /old_locus_tag="CMS1369" /inference="protein motif:HMMPfam:PF01225" /note="HMMPfam hit to PF01225, Cytoplasmic peptidoglycan synthetase, N-terminal, score 2.8e-53" misc_feature 1437779..1438048 /gene="murF" /locus_tag="CMS_1369" /old_locus_tag="CMS1369" /inference="protein motif:HMMPfam:PF02875" /note="HMMPfam hit to PF02875, Cytoplasmic peptidoglycan synthetases, C-terminal, score 1.1e-14" gene 1438219..1439328 /gene="mraY" /locus_tag="CMS_1370" /old_locus_tag="CMS1370" /db_xref="GeneID:6158833" CDS 1438219..1439328 /gene="mraY" /locus_tag="CMS_1370" /old_locus_tag="CMS1370" /EC_number="2.7.8.13" /note="First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="YP_001710097.1" /db_xref="GI:170781765" /db_xref="GeneID:6158833" /translation="MVALLGAGAISLVFTLFLTPLFIKLFHRLQWGQFIRDDGPQSHH TKRGTATMGGIVIILASVIGYFAGHLLTWDGIRFDPVTPSGLLVVFMMVGLGFVGFLD DYLKTRKQQSLGLGGWQKIAGQVIVATVFAVLAITLRDPVSGLTPASTAISLFRDLPL DFMALGAVIGTGLFIVWICLIVASASNGVNVADGLDGLAAGASIFSIGSYVIIGFWQF NQSCDSVSSYQNEYRCYEVASPLDLAIIAASIVGALIGFLWWNTSPAQIFMGDTGSLG LGGALAALAILSRTELLLVFIGGLFVIVAGSVVLQRAYFKITKGKRIFLMSPLHHHFE LKGWAEVTVVVRFWIIAGLLVAAGVGTFYLEWITQ" misc_feature order(1438228..1438296,1438366..1438434,1438462..1438521, 1438558..1438626,1438702..1438770,1438807..1438872, 1438930..1438998,1439017..1439085,1439095..1439163, 1439251..1439319) /gene="mraY" /locus_tag="CMS_1370" /old_locus_tag="CMS1370" /note="10 probable transmembrane helices predicted for CMS1370 by TMHMM2.0 at aa 4-26, 50-72, 82-101, 114-136,162-184, 197-218, 238-260, 267-289, 293-315 and 345-367" misc_feature 1438471..1439100 /gene="mraY" /locus_tag="CMS_1370" /old_locus_tag="CMS1370" /inference="protein motif:HMMPfam:PF00953" /note="HMMPfam hit to PF00953, Glycosyl transferase,family 4, score 1.4e-38" gene 1439331..1440875 /gene="murD" /locus_tag="CMS_1371" /old_locus_tag="CMS1371" /db_xref="GeneID:6158822" CDS 1439331..1440875 /gene="murD" /locus_tag="CMS_1371" /old_locus_tag="CMS1371" /EC_number="6.3.2.9" /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase" /protein_id="YP_001710098.1" /db_xref="GI:170781766" /db_xref="GeneID:6158822" /translation="MTDAPLHDGQAHARPDYLHSWHDDWTGLRVAVLGLGRTGFSVAD TLIELGADVLVVAADTSPERLALLDVIGGRLVRPTDEEPVPAELVAFAPELVVVSPGY APTHPLPAWATDAGIPLWGDIELAWRVRDKTGTPAEWITITGTNGKTTTTQLTAALLQ EGGVRAVPCGNIGLPVLDVVRHPDGFDVLVVELSSHQLHYMREVRPYSSAFLNLADDH LEWHGSRQAYAAAKGRVYADTRVACVYNRADRATEDALRHANVQDGARAIGFGLDAPG PSDLGIVDDILCDRAFLEERFTSALELTTLDELRAVGLAAPHIVQNVLAAAALARSYG VSPAVVRQALQRFELDSHRIERIGERDGVAFVDDSKATNPHAASASLAAFPSVVWLVG GLLKGVELDDLIRAHAARLRAAIVIGVERAELLAAFARHAPDVTVLEVAESDTDEVMR SAVRLAAGVAREGDTVLLAPAAASMDQFTDYADRGRRFRAAVDHHLGGAADDTAPEND ADPSRG" misc_feature 1439526..1440353 /gene="murD" /locus_tag="CMS_1371" /old_locus_tag="CMS1371" /inference="protein motif:HMMPfam:PF01225" /note="HMMPfam hit to PF01225, Cytoplasmic peptidoglycan synthetase, N-terminal, score 4.6e-37" misc_feature 1440378..1440623 /gene="murD" /locus_tag="CMS_1371" /old_locus_tag="CMS1371" /inference="protein motif:HMMPfam:PF02875" /note="HMMPfam hit to PF02875, Cytoplasmic peptidoglycan synthetases, C-terminal, score 5.5e-11" gene 1440832..1442121 /gene="ftsW" /locus_tag="CMS_1372" /old_locus_tag="CMS1372" /db_xref="GeneID:6158831" CDS 1440832..1442121 /gene="ftsW" /locus_tag="CMS_1372" /old_locus_tag="CMS1372" /codon_start=1 /transl_table=11 /product="putative cell division protein FtsW" /protein_id="YP_001710099.1" /db_xref="GI:170781767" /db_xref="GeneID:6158831" /translation="MTLPPRTTRTPRAADAPGLRGPRTPQATDEPTQEGTQRRGLAAR IHLGRAFHAESGSYFLLLGTTLFLVVFGLVMVLSSSSIDSFVAGGGFFGIFLKQGMFA LIGVPLMLLVSLVPPMFWKRWAWVLLLAASAVQLLVFGPMGVKVGENIGWIRIAGTTF QPAELIKVGLVIWLAFILARKRHLLRTWPHILIPVLPVAGGAVGLVALGGDLGTVIIM ASIVLGALFFAGIPIGKLTLMLTIGSVLAVLMTVISDSRMRRVTEFLTGQCDYAGGCW QSTHGLYALAAGGIFGVGLGNSKAKWMWLPEADNDYIFAIIGEELGLIGAIVVILLFV VLAIGFIRVIRANTDTFARVATGAVMTWIIVQAFVNIGVVLNLLPVLGVPLPFVSSGG SSLVTTLVAMGIVLGFARRPTTEESPDVVPAVIGMRS" misc_feature order(1441000..1441068,1441111..1441179,1441198..1441257, 1441300..1441368,1441402..1441470,1441513..1441581, 1441642..1441710,1441792..1441860,1441894..1441962, 1441990..1442058) /gene="ftsW" /locus_tag="CMS_1372" /old_locus_tag="CMS1372" /note="10 probable transmembrane helices predicted for CMS1372 by TMHMM2.0 at aa 57-79, 94-116, 123-142, 157-179,191-213, 228-250, 271-293, 321-343, 355-377 and 387-409" misc_feature 1441003..1442073 /gene="ftsW" /locus_tag="CMS_1372" /old_locus_tag="CMS1372" /inference="protein motif:HMMPfam:PF01098" /note="HMMPfam hit to PF01098, Cell cycle protein, score 9.9e-85" gene 1442118..1443221 /gene="murG" /locus_tag="CMS_1373" /old_locus_tag="CMS1373" /db_xref="GeneID:6158699" CDS 1442118..1443221 /gene="murG" /locus_tag="CMS_1373" /old_locus_tag="CMS1373" /EC_number="2.4.1.227" /note="UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis" /codon_start=1 /transl_table=11 /product="undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase" /protein_id="YP_001710100.1" /db_xref="GI:170781768" /db_xref="GeneID:6158699" /translation="MTVYLLAGGGTAGHVNPLLAVADELRAREPGSTILVLGTREGLE SRLVPARGYELLTIARLPFPRRPNGAAVRFAPAFTRAVGQIRRMIAERGVDVVVGFGG YAAAPAYLAARRSGVPVVVHEANASPGLANRLGARVATAVGITFPGTALGPRAEVVGM PLRREIATLDRDAVRDAARAELGLDADRPTLLVTGGSTGARSLNRTVVQVAERITATG AQILHIVGGAQEFTDPGVERYHVVGYSDRMELAIAAADLVVSRAGAGALSELTAVGIP AVYVPYPVGNGEQAVNVRGVVAAGGGIVVADADFTPDWVLAHVVPLLSDPAALARMSE AAASVGTRDGAARMADLVRDAVASRPSRPAVRR" misc_feature 1442127..1442549 /gene="murG" /locus_tag="CMS_1373" /old_locus_tag="CMS1373" /inference="protein motif:HMMPfam:PF03033" /note="HMMPfam hit to PF03033, Glycosyl transferase,family 28, score 6.4e-33" misc_feature 1442685..1443161 /gene="murG" /locus_tag="CMS_1373" /old_locus_tag="CMS1373" /inference="protein motif:HMMPfam:PF04101" /note="HMMPfam hit to PF04101, Glycosyltransferase 28,C-terminal, score 4.5e-40" gene 1443269..1444699 /gene="murC" /locus_tag="CMS_1374" /old_locus_tag="CMS1374" /db_xref="GeneID:6158834" CDS 1443269..1444699 /gene="murC" /locus_tag="CMS_1374" /old_locus_tag="CMS1374" /EC_number="6.3.2.8" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanine ligase" /protein_id="YP_001710101.1" /db_xref="GI:170781769" /db_xref="GeneID:6158834" /translation="MIAPDLTMDIPTELGRVHFVGIGGSGMSGIARLFLAAGHRVTGS DSRDSDAVQALRELGAEIHVGHDAAHVGDADALVVTGALWQDNPEYVLAKERGLPILH RSQALAWLISGQRLVAVAGAHGKTTSTGMIVTALLEAGRDPSFVNGGVIGGIGVSSAP GSEELFVVEADESDGSFLLYDTAVALITNVDADHLDHYGSHEAFDDAFVRFASAASEL VVISSDDPGARRVTARIEGRVVTFGEDPAADIRITDIVTDGPVAFTLTHDGVSRRAAL RVPGRHNAINAAGAYAVLVGLGVDPDDAIAGLAGFSGTSRRFELHAEVRGVSVYDDYA HHPTEVRAALEAARTVVGEGRIIAVHQPHLYSRTQMMAGDFARVYEELADHTIVLDVF GAREDPIPGVTGALVSERFADASHVDYLPDWQQAADRAAEIARDGDFIVTLSCGDVYR IIPQVIGALERPAGSAQPAASSRPRE" misc_feature 1443416..1444183 /gene="murC" /locus_tag="CMS_1374" /old_locus_tag="CMS1374" /inference="protein motif:HMMPfam:PF01225" /note="HMMPfam hit to PF01225, Cytoplasmic peptidoglycan synthetase, N-terminal, score 1.1e-46" misc_feature 1444208..1444480 /gene="murC" /locus_tag="CMS_1374" /old_locus_tag="CMS1374" /inference="protein motif:HMMPfam:PF02875" /note="HMMPfam hit to PF02875, Cytoplasmic peptidoglycan synthetases, C-terminal, score 2e-23" gene 1445119..1445946 /gene="ftsQ" /locus_tag="CMS_1375" /old_locus_tag="CMS1375" /db_xref="GeneID:6158830" CDS 1445119..1445946 /gene="ftsQ" /locus_tag="CMS_1375" /old_locus_tag="CMS1375" /codon_start=1 /transl_table=11 /product="cell division protein FtsQ" /protein_id="YP_001710102.1" /db_xref="GI:170781770" /db_xref="GeneID:6158830" /translation="MDGEPTPRSHRPARPASAATGDAEARRQLRRARRERQRYERQEV RRFTQRTRRRRAGLLGALGAVLTLAIVVGIAVYSPLLALRTVEVEGADRVSPQSIQAA LSDQVGTPLPLVDLDRVGDELRAFPLIRSYSTESRPPSTLVIRIVERTPVAVIQSGAG FDLVDPAGITIERATARPDGYPLIDLPSADFSSPRFQAAAAVLVALPADFLPQVDSIQ ANTTDDVMLTLRSGKKVLWGSGERSVDKAQVLQALVKARGDVGSYDVSAPDAPVAGP" misc_feature 1445278..1445916 /gene="ftsQ" /locus_tag="CMS_1375" /old_locus_tag="CMS1375" /inference="protein motif:HMMPfam:PF03799" /note="HMMPfam hit to PF03799, Cell division protein FtsQ,score 3.5e-19" misc_feature 1445284..1445352 /gene="ftsQ" /locus_tag="CMS_1375" /old_locus_tag="CMS1375" /note="1 probable transmembrane helix predicted for CMS1375 by TMHMM2.0 at aa 157-179" gene 1446084..1447223 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /db_xref="GeneID:6158698" CDS 1446084..1447223 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /note="GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function" /codon_start=1 /transl_table=11 /product="cell division protein FtsZ" /protein_id="YP_001710103.1" /db_xref="GI:170781771" /db_xref="GeneID:6158698" /translation="MSNNQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFIAINTDA QALLMSDADVKLDVGREITRGLGAGADPEVGRRAAEDHAEEIEEALAGADMVFVTAGE GGGTGTGGAPVVARIAKSIGALTIGVVTKPFGFEGKRRSAQAELGVATLKNEVDTLIV VPNDRLLEISDRGISMLEAFATADQVLLAGVQGITDLITTPGLINLDFADVKSVMQGA GSALMGIGSSRGADRSIKAAELAVASPLLEASIEGAHGVLLSIQGGSNLGIFEINDAA KLVQEAVHPEANIIFGAVIDDTLGDEVRVTVIAAGFDGGEPASKVENRRSGFVAAGGG AVAAPEAVESAPARPHAEAPVASVPASDPTFEDDGDDLDIPDFLK" misc_feature 1446108..1446689 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /inference="protein motif:HMMPfam:PF00091" /note="HMMPfam hit to PF00091, Tubulin/FtsZ, GTPase, score 5.8e-88" misc_feature 1446204..1446308 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /note="PS01134 FtsZ protein signature 1." misc_feature 1446363..1446428 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /note="PS01135 FtsZ protein signature 2." misc_feature 1446693..1447064 /gene="ftsZ" /locus_tag="CMS_1376" /old_locus_tag="CMS1376" /inference="protein motif:HMMPfam:PF03953" /note="HMMPfam hit to PF03953, Tubulin/FtsZ, C-terminal,score 2.3e-30" gene 1447310..1447951 /locus_tag="CMS_1377" /old_locus_tag="CMS1377" /db_xref="GeneID:6158702" CDS 1447310..1447951 /locus_tag="CMS_1377" /old_locus_tag="CMS1377" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710104.1" /db_xref="GI:170781772" /db_xref="GeneID:6158702" /translation="MQADVADGIRAAGRRPDEVTTIVVTKFQPVSLLRALVDLGVRDL GESRHQEAQGKAAELEGSGVAWHFVGQLQGKKARQVRRYASVIHSVDRPSLIDALSSD EQETRVFLQVNLTADEGRGGVPPAEAEALAEHAAAAPGIRVLGVMAVAPDDGEPRRAF ARLRGISDDVRRILPDARAISAGMSGDLREALLEGATHLRIGSAITGKRPGGP" misc_feature 1447337..1447942 /locus_tag="CMS_1377" /old_locus_tag="CMS1377" /inference="protein motif:HMMPfam:PF01168" /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal, score 7.9e-15" misc_feature 1447505..1447549 /locus_tag="CMS_1377" /old_locus_tag="CMS1377" /note="PS01211 Uncharacterized protein family UPF0001 signature." gene 1448027..1448494 /locus_tag="CMS_1378" /old_locus_tag="CMS1378" /db_xref="GeneID:6157220" CDS 1448027..1448494 /locus_tag="CMS_1378" /old_locus_tag="CMS1378" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710105.1" /db_xref="GI:170781773" /db_xref="GeneID:6157220" /translation="MYLGLADEELDYQQGQQPAQQQQSPVQAVPTPVPAPQQQAKRAP VTPLHKPSTTTRNAAPAEMNEILTVHPKAYKDAQVIAENFREGVPVIINLSQMTDDDA RRLIDFASGLSIGLYGKIERVTAKVFLLSPSHVAVSGEQSATEAEVEASFFGR" misc_feature 1448207..1448446 /locus_tag="CMS_1378" /old_locus_tag="CMS1378" /inference="protein motif:HMMPfam:PF04472" /note="HMMPfam hit to PF04472, Protein of unknown function DUF552, score 7.1e-36" gene 1448562..1448861 /locus_tag="CMS_1379" /old_locus_tag="CMS1379" /db_xref="GeneID:6157221" CDS 1448562..1448861 /locus_tag="CMS_1379" /old_locus_tag="CMS1379" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710106.1" /db_xref="GI:170781774" /db_xref="GeneID:6157221" /translation="MLIVTIIATVLWFALLAFIICMWGRFVLDLVQSLSRQWRPRGAM LIVAEASYTVTDPPIGLVRRLIPPLRLGPVALDFGWMITMLVAIILFNVASGFIR" misc_feature order(1448565..1448633,1448787..1448855) /locus_tag="CMS_1379" /old_locus_tag="CMS1379" /note="2 probable transmembrane helices predicted for CMS1379 by TMHMM2.0 at aa 2-24 and 76-98" gene 1448908..1449651 /locus_tag="CMS_1380" /old_locus_tag="CMS1380" /db_xref="GeneID:6157222" CDS 1448908..1449651 /locus_tag="CMS_1380" /old_locus_tag="CMS1380" /codon_start=1 /transl_table=11 /product="putative cell division protein" /protein_id="YP_001710107.1" /db_xref="GI:170781775" /db_xref="GeneID:6157222" /translation="MRSADNVGSHVVPNPRPHLRTPLYAQKRWQAMALTPEDVVNKRF QPTKFREGYDQDEVDDFLDEVVVELRRLHQENEELRQRLGSGDAAPAATTVIDTPAPA AVEQAPVVVEPEPTPEPEPAPVVAQAPAAAPAADEDDETSSTSSLLKLARKLHEEHVR EGIEKRDALVAEAHATAARIAAEAEAEQRSKTAILEKERQVLEGRIDELRTFEREYRT KLKGYIEGQLRELDSAGSTEAPATASFGN" misc_feature 1449001..1449648 /locus_tag="CMS_1380" /old_locus_tag="CMS1380" /inference="protein motif:HMMPfam:PF05103" /note="HMMPfam hit to PF05103, DivIVA, score 7.1e-13" gene 1449682..1450710 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /db_xref="GeneID:6157223" CDS 1449682..1450710 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /EC_number="4.2.1.70" /codon_start=1 /transl_table=11 /product="putative ribosomal large subunit pseudouridine synthase" /protein_id="YP_001710108.1" /db_xref="GI:170781776" /db_xref="GeneID:6157223" /translation="MGLRLQRATGSRVAVVVRAATVTAAPPAPHRTGRGHPMEHRTMP VPDGLDGQRVDVGLARLLGFSRSFAAEVAEAGGVTQDGREAGKSDRLVGGSMLAVSWQ PRQEPSVVPLAVPDLGIVHDDDDIVVVDKPVGVAAHPSVGWTGPTVLGALAAAGFRLS TSGAEERQGIVHRLDAGTSGLMVVAKTERAYTELKRQFHDREVEKVYHAVVQGHPDPL AGTIDAPIGRHPRSDWKFAVTADGKPSVTHYETLEAFRRAALLEVHLETGRTHQIRVH MAAQRHPCVGDAMYGADPTISAQLGLQRQWLHAMRLDITHPATGDRASFSSTYPADLQ HALDVLQD" sig_peptide 1449682..1449753 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /note="Signal peptide predicted for CMS1381 by SignalP 2.0 HMM (Signal peptide probability 0.880) with cleavage site probability 0.641 between residues 24 and 25" misc_feature 1449835..1449972 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /inference="protein motif:HMMPfam:PF01479" /note="HMMPfam hit to PF01479, RNA-binding S4, score 0.0061" misc_feature 1450054..1450518 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /inference="protein motif:HMMPfam:PF00849" /note="HMMPfam hit to PF00849, Pseudouridine synthase,score 1.5e-67" misc_feature 1450192..1450236 /gene="rlu" /locus_tag="CMS_1381" /old_locus_tag="CMS1381" /note="PS01129 Rlu family of pseudouridine synthase signature." gene 1450787..1454299 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /db_xref="GeneID:6158937" CDS 1450787..1454299 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /EC_number="2.7.7.7" /note="catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit alpha" /protein_id="YP_001710109.1" /db_xref="GI:170781777" /db_xref="GeneID:6158937" /translation="MPRNDSFVHLHVHSEYSMLDGAARVGPLVQAAAEQGMPAVAITD HGNVFGAFDFWKQAKAAGVKPIIGTEAYITPGTHRGDRTRIRWGNGGQDDVSGSGAYT HLTMLAETTEGMHNLFRLSSRASLEGYYFKPRMDRELLSTYAKGLIATTGCPSGEVQT RLRLGQYDEAVKAAADFRDIFGAENYFCEVMDHGLGIERRIMTDLHRLAKDLGLPLVA TNDLHYTHEHDATSHAALLCVQSGTTLDDPNRFKFDADEFYLKTAQQMRHLFRDHEEA CDNTLLIAERCDVQFNESANYMPRYPVPEGESEQTWFVKEVERGLVRRYPRGFSDDVR KRADYEVGVIAQMGFPGYFLVVADFINWSKENGIRVGPGRGSGAGSMVAYAMGITDLD PLEHGLLFERFLNPDRVSMPDFDVDFDDRRRGEVIRYVTDKYGDERVAQIVTYGTIKA KQALKDSSRVLGYPFSMGDKLTKAMPPAIMGKDIPLSGILDTEHPRYREAGDFREVLA MDPEAQKVFETAQGIENLKRQWGVHAAGVIMSSEPLIDIIPIMKREQDGQIVTQFDYP ACESLGLIKMDFLGLRNLTIIDDALNNIESNRGEKLVLEDLGLDDQGAYDLLARGDTL GVFQLDGGPMRSLLRMMKPDNFEDISAVIALYRPGPMGANSHTNYALRKNGLQEITPI HPELEEPLREVLGTTHGLIVYQEQVMSVAQKLAGFTLAQADLLRRAMGKKKKSELDKQ FEGFSQGMKDNGYSMAAVKALWDILLPFSDYAFNKAHSAAYGVVSYWTAYLKAHYPAE YMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVNESIGFFAAAGADIRFGLGAVRN VGANVVEALRGARTEQGAFESFDDFLKKVPLPVANKRTVESLIKAGAFDSLGDTRRAL LEVHEGMIDASVSDKRAAMNGQVGFDFDSLWDEPQHARKVPERPEWAKRDKLAFEREM LGLYVSDHPLAGLEIPLAKLASTGIAELLATDASMDGETVTLAGLLTSVQHRTARNSG NQYGMVQLEDFGGEITCMFMGKAYQEFAPALQSDTVVVIRGRVSTRDDGMNIHAFSMF QPDLGQSLGSGPLLISLAENRATTETVMGLNDVLIRHSGDTEVRLQLVKGDSGRVFEI PYPVTVSADLYGELKSLLGPNCLG" misc_feature 1450808..1451005 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /inference="protein motif:HMMPfam:PF02231" /note="HMMPfam hit to PF02231, Phosphoesterase PHP,N-terminal, score 2e-34" misc_feature 1451084..1451479 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /inference="protein motif:HMMPfam:PF02811" /note="HMMPfam hit to PF02811, PHP, C-terminal, score 1.9e-34" misc_feature 1451558..1453042 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /inference="protein motif:HMMPfam:PF07733" /note="HMMPfam hit to PF07733, Bacterial DNA polymerase III alpha subunit, score 3.2e-283" misc_feature 1453820..1454056 /gene="dnaE" /locus_tag="CMS_1382" /old_locus_tag="CMS1382" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 2.9e-12" gene complement(1454406..1454981) /locus_tag="CMS_1383" /old_locus_tag="CMS1383" /db_xref="GeneID:6158666" CDS complement(1454406..1454981) /locus_tag="CMS_1383" /old_locus_tag="CMS1383" /codon_start=1 /transl_table=11 /product="putative flavin-dependent reductase" /protein_id="YP_001710110.1" /db_xref="GI:170781778" /db_xref="GeneID:6158666" /translation="MTPEVYRAGAGRIRRLASPGMDAHPATTLAEADGLAAFRAAFRR HAAGVAVVTTHDAHGSPVGFTATSLASVSADPPLASFSLARTASSAAAITAADHVAIH VLGARDRHLAERLSGPAAERFAGDHWSPGPHGLPVLTGGTALLVARIVERVHVHGAIV VIVRIEDGGTGVDDEPLLYHARRYLRPGAEA" misc_feature complement(1454418..1454858) /locus_tag="CMS_1383" /old_locus_tag="CMS1383" /inference="protein motif:HMMPfam:PF01613" /note="HMMPfam hit to PF01613, Flavin reductase-like,score 1.9e-36" gene 1454980..1456287 /gene="hisD" /locus_tag="CMS_1384" /old_locus_tag="CMS1384" /db_xref="GeneID:6157224" CDS 1454980..1456287 /gene="hisD" /locus_tag="CMS_1384" /old_locus_tag="CMS1384" /EC_number="1.1.1.23" /note="catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="YP_001710111.1" /db_xref="GI:170781779" /db_xref="GeneID:6157224" /translation="MMRIQDLRGTTPSTADLLDLLPRPVTDVAVALDVARELVEDVRT RGSAALLDQAERLDRVRPESLRVPAEAIADAVEGLDPAVRAALEEAIRRVRVGSAAQV PPETTTTVVRGGTIVQRWQPVRRVGLYVPGGKAVYPSSVVMNVVAAQVAGVASIALAS PAQAAHGGSVHPVILGAAGLLGVDEVYAMGGAGAIGAFAHGVPDLGLEPVDVVTGPGN IYVAAAKRVVRGVTGIDSEAGTTEILVIADAHADARLVAADLVSQAEHDEMAASVLVT DSPELARAVDAEVEALAATTEHAARVGQALTGPQSAILVVDDLATAARYSDAYGPEHL SVQTADPDALLAHLHSAGAIFLGPHSPVSLGDYLAGSNHVLPTGGQARFGSGLGAYTF LRPQQVVRYDADALRDAEPMIVALSRAEDLPAHGDAVTARLTR" misc_feature 1455028..1456281 /gene="hisD" /locus_tag="CMS_1384" /old_locus_tag="CMS1384" /inference="protein motif:HMMPfam:PF00815" /note="HMMPfam hit to PF00815, Histidinol dehydrogenase,score 5.6e-168" gene 1456305..1456778 /gene="nrdR" /locus_tag="CMS_1385" /old_locus_tag="CMS1385" /db_xref="GeneID:6158751" CDS 1456305..1456778 /gene="nrdR" /locus_tag="CMS_1385" /old_locus_tag="CMS1385" /codon_start=1 /transl_table=11 /product="transcriptional regulator NrdR" /protein_id="YP_001710112.1" /db_xref="GI:170781780" /db_xref="GeneID:6158751" /translation="MFCPFCRHPDSRVVDSRTSDDGLSIRRRRQCPECGRRFSTTETA SLSVIKRNGVVEPFSREKIVTGVRKACQGRPVTDTDLAVLAQRVEEAIRATGASQIEA NDIGLSILPPLRELDEVAYLRFASVYQGFDSLDDFEAAIAQLRVAHAATPDADAL" misc_feature 1456449..1456712 /gene="nrdR" /locus_tag="CMS_1385" /old_locus_tag="CMS1385" /inference="protein motif:HMMPfam:PF03477" /note="HMMPfam hit to PF03477, ATP-cone, score 3.7e-20" gene 1456836..1457876 /gene="pyrD" /locus_tag="CMS_1386" /old_locus_tag="CMS1386" /db_xref="GeneID:6157225" CDS 1456836..1457876 /gene="pyrD" /locus_tag="CMS_1386" /old_locus_tag="CMS1386" /EC_number="1.3.3.1" /note="catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase 2" /protein_id="YP_001710113.1" /db_xref="GI:170781781" /db_xref="GeneID:6157225" /translation="MPMYPLLFRTVLSRMDPEDAHHLASTAISLLPPSGLGWIARRLT APDPSLAVDTLGLRFPSPFGVAAGFDKDARAVLGLGQLGFGHVEVGTVTAEAQPGNPR PRLFRLIEDRAVINRMGFNNGGAAALADRLRRLRTRRDRPVIGVNIGKTRVVAVEDAV ADYVRTTRLVAPVADYLAVNVSSPNTPGLRGLQEIDLLRPLLTSIRDAADGVPVLVKI APDLQDAEVERIAELATELGLAGVIATNTTLSRADLRTDAAVVEAAGAGGLSGAPLAP RALEVLRILRRVLPSDACIISVGGVDTADDVQSRLDAGATLVQGYTAFLYRGPLWARS INAGLARIRRPR" misc_feature 1456980..1457864 /gene="pyrD" /locus_tag="CMS_1386" /old_locus_tag="CMS1386" /inference="protein motif:HMMPfam:PF01180" /note="HMMPfam hit to PF01180, Dihydroorotate dehydrogenase, score 6e-122" misc_feature 1457088..1457147 /gene="pyrD" /locus_tag="CMS_1386" /old_locus_tag="CMS1386" /note="PS00911 Dihydroorotate dehydrogenase signature 1." misc_feature 1457718..1457780 /gene="pyrD" /locus_tag="CMS_1386" /old_locus_tag="CMS1386" /note="PS00912 Dihydroorotate dehydrogenase signature 2." gene complement(1457907..1458500) /locus_tag="CMS_1387" /old_locus_tag="CMS1387" /db_xref="GeneID:6158909" CDS complement(1457907..1458500) /locus_tag="CMS_1387" /old_locus_tag="CMS1387" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710114.1" /db_xref="GI:170781782" /db_xref="GeneID:6158909" /translation="MAKQQTPAETPSETSATAAVDGRTADGKKGPTPTRREREAANLR PLVPQDRKLAAQQAKEKAREARARANAGMAAGDERYLPVRDKGPQKRYARDIVDARWS VGEFLLPVMGVVVVLTFVVPSLSAIPLLSIYVFVIAAIIDAYLTGRRVRAAITARVGA DRVERGIRWYTGMRTIQMRPMRLPKPQVKRREKVTFS" misc_feature complement(order(1458060..1458128,1458138..1458206)) /locus_tag="CMS_1387" /old_locus_tag="CMS1387" /note="2 probable transmembrane helices predicted for CMS1387 by TMHMM2.0 at aa 99-121 and 125-147" gene 1458541..1459962 /locus_tag="CMS_1388" /old_locus_tag="CMS1388" /db_xref="GeneID:6157226" CDS 1458541..1459962 /locus_tag="CMS_1388" /old_locus_tag="CMS1388" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710115.1" /db_xref="GI:170781783" /db_xref="GeneID:6157226" /translation="MTPPDTSADAVTAPDQEVVDRLAAAVAGGLPTTIADLSALVRIP SVSWPAFDPTHVVASADAVAGLLAGLGVFDDVSVHRATTPSGDAGQPAVLATRAARNG KPTVLLYAHHDVQPPGADEHWETLPFEPTLRGDRLHGRGASDDKAGIMTHVAAIRALV EAEGDDLDLGLAVFIEGEEEAGSRSFSDFLATHHDALAADVIVVADSDNWDVDTPSIT IALRGNVTFRLTVRTLDLASHSGMFGGAVPDAMMAAVRLLDSLWDADGSVAVAGLAST EMATPAYDDARLAEEAALLPGVSPIGTGPILTRLWAQPAITVTGIDAPSVANASNTLL PEVSVRISARIAPGQTAADAYRALEAHVEAHRPFGAHVEISDVDQGDPFLVDTTGWAM AEATAAMTAGWGRAPVQAGIGGSIPFIADLVQAFPSAQILVTGVEDPDTRAHSPNESQ HLGVLKRAILSEAVLLSRIARRG" misc_feature 1458859..1459944 /locus_tag="CMS_1388" /old_locus_tag="CMS1388" /inference="protein motif:HMMPfam:PF01546" /note="HMMPfam hit to PF01546, Peptidase M20, score 4.8e-17" misc_feature 1459195..1459650 /locus_tag="CMS_1388" /old_locus_tag="CMS1388" /inference="protein motif:HMMPfam:PF07687" /note="HMMPfam hit to PF07687, Peptidase dimerisation domain, score 1.2e-15" gene 1460098..1460460 /locus_tag="CMS_1389" /old_locus_tag="CMS1389" /db_xref="GeneID:6157227" CDS 1460098..1460460 /locus_tag="CMS_1389" /old_locus_tag="CMS1389" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710116.1" /db_xref="GI:170781784" /db_xref="GeneID:6157227" /translation="MTDTTLTETAEAAHRVGLTDTAASKVKSLLQQEGREDLRLRVAV QPGGCSGLIYQLYFDERELDGDATVDFDGVEVIVDKMSVPYLDGATIDFEDTIQKQGF TIDNPNAGGSCACGDSFH" misc_feature 1460116..1460181 /locus_tag="CMS_1389" /old_locus_tag="CMS1389" /note="Predicted helix-turn-helix motif with score 1065.000, SD 2.81 at aa 29-50, sequence TETAEAAHRVGLTDTAASKVKS" misc_feature 1460140..1460457 /locus_tag="CMS_1389" /old_locus_tag="CMS1389" /inference="protein motif:HMMPfam:PF01521" /note="HMMPfam hit to PF01521, HesB/YadR/YfhF, score 7.7e-47" misc_feature 1460401..1460454 /locus_tag="CMS_1389" /old_locus_tag="CMS1389" /note="PS01152 Hypothetical hesB/yadR/yfhF family signature." gene 1460546..1461496 /locus_tag="CMS_1390" /old_locus_tag="CMS1390" /db_xref="GeneID:6157228" CDS 1460546..1461496 /locus_tag="CMS_1390" /old_locus_tag="CMS1390" /codon_start=1 /transl_table=11 /product="putative cytochrome C oxidase subunit II" /protein_id="YP_001710117.1" /db_xref="GI:170781785" /db_xref="GeneID:6157228" /translation="MEPVTSGSSKGLHVRFTRRQRWLTIPVALGISILLAGCTQQQLQ GFLPTEPGTTNHVDSVIGLWVTAWIVLLAVGVLTWGLTIWAAVVYRRRKGQTGLPVQM RYNMPIEIFYTIVPLILVLGFFAFTAKDQAAIEARFDKPEVKVQVFGKQWAWDFNYLG GETEAGQPIEGGAYEQGVQAVDDPNGPQGSIDKDKLPTLYLPVNTKVELELNTRDTLH SFWVVDFLYKKDLISGKTNYMTFIPEKEGTYMGKCAELCGEYHSLMLFQVKVVSVDEY NAYIEKQKAAGFAGDLGKDYDRLQNLPGTDVPATTESAEK" sig_peptide 1460546..1460716 /locus_tag="CMS_1390" /old_locus_tag="CMS1390" /note="Signal peptide predicted for CMS1390 by SignalP 2.0 HMM (Signal peptide probability 0.857) with cleavage site probability 0.406 between residues 57 and 58" misc_feature order(1460606..1460674,1460732..1460800,1460861..1460929) /locus_tag="CMS_1390" /old_locus_tag="CMS1390" /note="3 probable transmembrane helices predicted for CMS1390 by TMHMM2.0 at aa 21-43, 63-85 and 106-128" misc_feature 1460972..1461394 /locus_tag="CMS_1390" /old_locus_tag="CMS1390" /inference="protein motif:HMMPfam:PF00116" /note="HMMPfam hit to PF00116, Cytochrome c oxidase,subunit II, score 8.5e-15" gene 1461509..1463254 /locus_tag="CMS_1391" /old_locus_tag="CMS1391" /db_xref="GeneID:6157229" CDS 1461509..1463254 /locus_tag="CMS_1391" /old_locus_tag="CMS1391" /codon_start=1 /transl_table=11 /product="putative cytochrome C oxidase subunit I" /protein_id="YP_001710118.1" /db_xref="GI:170781786" /db_xref="GeneID:6157229" /translation="MTSTLNRPTAIPAGQAKVLQDSGKAERRGNVVVNWITSTDHKTI GYLYLITSFLYFCLGGVMALVIRAQLFEPGLHVVETKEQYNQLFTMHGTIMLLMFATP LFAGFANVLMPLQIGAPDVAFPRLNAFAYWLFNFGSLIAVAGFLTPAGAASFGWFAYA PLSSTTFSPGLGGNLWVMGLALSGFGTILGAVNFVTTIITMRAPGMTMFRMPIFTWNI LVTSILVLMAFPVLAAALFGLGADRIFDAHIYDPANGGAILWQHLFWFFGHPEVYIIA LPFFGIVSEVFPVFSRKPIFGYKTLVYATISIAALSVTVWAHHMYVTGSVLLPFFSLM TMLIAVPTGVKIFNWIGTMWRGSVTFETPMLWAIGFLITFTFGGLTGIILASPPLDFH VSDTYFVVAHFHYVVFGTVVFAMFSGFYFWWPKWTGTMLNERLGKVHFWLLFIGFHTT FLIQHWLGVMGMPRRYATYQPEDDFTWMNQLSTIGAGILALSMIPFFLNVWITARTAP RVTVNDPWGYGRSLEWATSCPPPRHNFTSIPRIRSEAPAFDLNHPEAGIPVGIGPAKD APDAATYDISSDKVK" misc_feature 1461611..1462975 /locus_tag="CMS_1391" /old_locus_tag="CMS1391" /inference="protein motif:HMMPfam:PF00115" /note="HMMPfam hit to PF00115, Cytochrome c oxidase,subunit I, score 1.3e-229" misc_feature order(1461638..1461706,1461764..1461832,1461893..1461988, 1462031..1462099,1462160..1462228,1462286..1462354, 1462391..1462459,1462487..1462555,1462592..1462660, 1462703..1462771,1462820..1462888,1462946..1463014) /locus_tag="CMS_1391" /old_locus_tag="CMS1391" /note="12 probable transmembrane helices predicted for CMS1391 by TMHMM2.0 at aa 44-66, 86-108, 129-160, 175-197,218-240, 260-282, 295-317, 327-349, 362-384, 399-421,438-460 and 480-502" misc_feature 1462301..1462465 /locus_tag="CMS_1391" /old_locus_tag="CMS1391" /note="PS00077 Heme-copper oxidase catalytic subunit,copper B binding region signature." gene 1463256..1463672 /locus_tag="CMS_1392" /old_locus_tag="CMS1392" /db_xref="GeneID:6157230" CDS 1463256..1463672 /locus_tag="CMS_1392" /old_locus_tag="CMS1392" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710119.1" /db_xref="GI:170781787" /db_xref="GeneID:6157230" /translation="MRANRNLFYVLAVFFAIAAAAYTIWHLIDQNTVEWVGTLAIALS GVLAAFIGFFVARLYAAQNGELPEDRSDANVDDGDPELGFFSPWSWWPVILAAGAASV FLGLAVGIWIAIIGGGLAIIALVGWTYEYYRGYFAR" sig_peptide 1463256..1463315 /locus_tag="CMS_1392" /old_locus_tag="CMS1392" /note="Signal peptide predicted for CMS1392 by SignalP 2.0 HMM (Signal peptide probability 0.981) with cleavage site probability 0.477 between residues 20 and 21" misc_feature order(1463274..1463342,1463370..1463438,1463499..1463567, 1463580..1463648) /locus_tag="CMS_1392" /old_locus_tag="CMS1392" /note="4 probable transmembrane helices predicted for CMS1392 by TMHMM2.0 at aa 7-29, 39-61, 82-104 and 109-131" gene 1463677..1464114 /locus_tag="CMS_1393" /old_locus_tag="CMS1393" /db_xref="GeneID:6157231" CDS 1463677..1464114 /locus_tag="CMS_1393" /old_locus_tag="CMS1393" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710120.1" /db_xref="GI:170781788" /db_xref="GeneID:6157231" /translation="MVDIRHAQASDGDAVFALCQQLDMINAPATRDDFDVTFSHILRA NKDVGRDVLLVAEEAGTVVGYAYLVVSRLLYAGGLSAHLEELVVDKDARSGGTGSALV RAVERLCGDRGVGQITMSTRRAGEFYKRLGYERTAEFYKKLLR" misc_feature 1463836..1464078 /locus_tag="CMS_1393" /old_locus_tag="CMS1393" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3.1e-11" gene 1464211..1465173 /locus_tag="CMS_1394" /old_locus_tag="CMS1394" /db_xref="GeneID:6157232" CDS 1464211..1465173 /locus_tag="CMS_1394" /old_locus_tag="CMS1394" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710121.1" /db_xref="GI:170781789" /db_xref="GeneID:6157232" /translation="MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 1464283..1464348 /locus_tag="CMS_1394" /old_locus_tag="CMS1394" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 1464607..1465149 /locus_tag="CMS_1394" /old_locus_tag="CMS1394" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.3e-41" gene complement(1465170..1465967) /locus_tag="CMS_1395" /old_locus_tag="CMS1395" /db_xref="GeneID:6157233" CDS complement(1465170..1465967) /locus_tag="CMS_1395" /old_locus_tag="CMS1395" /note="May form pseudogene with upstream CDS" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710122.1" /db_xref="GI:170781790" /db_xref="GeneID:6157233" /translation="MRTRRQAGLRRPRAGATPGIPGVSRDNPGVSPTMMILIAAVRSG RPWIMFRWRRGKSVPTEAAPAASDPRQAGPRSVAGPPAPPAPVVSTATGELAAIAARL HGGSVRPTHVPAHKAEPVAPSAGTTTADDAAPDPAPVPDLRPLAVIVKAALAHHFGPE GAWALVRRTPDTTAGFFDELMTAHIARDVALALGASPATAGLALEDARATGSPARDVT ARDASVRQDAVARELAVFDEDPLDGSLAELAGDPRRVPSALRAVLRA" gene complement(1466015..1466203) /locus_tag="CMS_1396" /old_locus_tag="CMS1396" /db_xref="GeneID:6157234" CDS complement(1466015..1466203) /locus_tag="CMS_1396" /old_locus_tag="CMS1396" /note="May form pseudogene with downstream CDS" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710123.1" /db_xref="GI:170781791" /db_xref="GeneID:6157234" /translation="MRKYILNGSVLSALVGGWSTLQTTRRGPRDWKLGLMWLSWGITV AIAVGTVIEDSRDGQIGN" misc_feature complement(1466048..1466107) /locus_tag="CMS_1396" /old_locus_tag="CMS1396" /note="1 probable transmembrane helix predicted for CMS1396 by TMHMM2.0 at aa 33-52" gene 1466390..1467520 /locus_tag="CMS_1397" /old_locus_tag="CMS1397" /db_xref="GeneID:6157235" CDS 1466390..1467520 /locus_tag="CMS_1397" /old_locus_tag="CMS1397" /codon_start=1 /transl_table=11 /product="membrane efflux protein" /protein_id="YP_001710124.1" /db_xref="GI:170781792" /db_xref="GeneID:6157235" /translation="MLLVVGAVAVATGALPLDDLGVLYERVWPILLFVVAITVVTELA SEAGLFTWIAERAAGLGRGRTWALWLATVLLACLCTIFLSLDTTAVLLTPVVVVLARH CGLPPLPFALTTVWLANTASLLLPVSNLTNLLAEHELGGLGPAGFAALTVAPALVAIA VPVLAILVIHRKDLFTRYEVGAPTAPTDRVLLVGSAVVVGLLVPALVSGVEVWIPALA AAVVLAILTAVRRPRVLRLGLLPWQLVVFASGLFIVMEAAQSLGLTAVMAAVSGQGQD AGALFRLAGVATLSANAVDNLPAYLALEPVAGSPERLVAILVGVNAGPLITPWASLAT LLWHERLVSMGVHIKWSRYMLLGLVVAPLTVGLAMLAFVLTH" misc_feature 1466390..1467511 /locus_tag="CMS_1397" /old_locus_tag="CMS1397" /inference="protein motif:HMMPfam:PF02040" /note="HMMPfam hit to PF02040, Arsenical pump membrane protein, score 9.2e-10" misc_feature order(1466480..1466548,1466585..1466644,1466828..1466896, 1466957..1467010,1467023..1467076,1467095..1467163, 1467332..1467400,1467437..1467505) /locus_tag="CMS_1397" /old_locus_tag="CMS1397" /note="8 probable transmembrane helices predicted for CMS1397 by TMHMM2.0 at aa 31-53, 66-85, 147-169, 190-207,212-229, 236-258, 315-337 and 350-372" gene 1467603..1468181 /locus_tag="CMS_1398" /old_locus_tag="CMS1398" /db_xref="GeneID:6157236" CDS 1467603..1468181 /locus_tag="CMS_1398" /old_locus_tag="CMS1398" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710125.1" /db_xref="GI:170781793" /db_xref="GeneID:6157236" /translation="MTRSPRASAGDELRTIAAARFARDGFQATSLQQIADEAGYSKSS VLYHFASKEALLDALLEPTIDALAGVIERADSIRGDEDARRQFVERFIDFLLLHRHEV ALFITQGRSLGHLAVIERANDLVRTLGETAGALDSTLDQLRFGVALGGAAYILAASDD WSTNEPLPDDEIRAALVVVVGELLAPLGTRSA" misc_feature 1467639..1467779 /locus_tag="CMS_1398" /old_locus_tag="CMS1398" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2.9e-14" misc_feature 1467687..1467752 /locus_tag="CMS_1398" /old_locus_tag="CMS1398" /note="Predicted helix-turn-helix motif with score 1658.000, SD 4.83 at aa 29-50, sequence TSLQQIADEAGYSKSSVLYHFA" gene 1468227..1471169 /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /db_xref="GeneID:6157237" CDS 1468227..1471169 /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710126.1" /db_xref="GI:170781794" /db_xref="GeneID:6157237" /translation="MATLLYRLGRISFLHPWRVVAAWILVLGILLGGGLALGGKTQES FSIPGTESQEVIDRLAAVFPQAAGASAQIVTEAPAGAKVTDDADKAAIEATAKAAGEV DGVATALSPFSEYASDAVSDDGTVAITTVQFSGQSDQVTTATLDALKESAQAAEDAGL TVSFGGQVFQDIHYGVTVTEAFGVLFAGLVLVLTFGSMLAAGLPLIGALVGVAASAGA LLAASKFVTVSSASPLLAVMIGLAVGIDYALFILMRHRTQLANGMPVERSASTAVATA GSAVIFAGVTVIIALLGLLVVQIPFLTVMGLGAAFAVLLAMGVATTLLPAMLGLAGER LRPKEGSRAARRAKAQSEGTQRTLGARWVKIVTKVPIIPVVIVIGIAGLLAVPASQLQ LGLPSGATEPAGSTSRVAYDTVSDAFGPGHNGPLVVLVDITQTTDPIGVLGEIGDEIR GLDDVAFVGTGTPNPSVDTAIIQVLPDSPPESAETTALMQSIRDLAPGLHDRYDTRVS VTGTTAVQNDISQRLDQALVPFGIVVVGLSIILLMIVFRSIFVPIKAAVGFLLSVVVS FGTVVLIFQDGAFADVLGVTPGPILSFMPILLMAILFGLAMDYEVFLVSGMREDFVHH GDAKRAIVTGFSGAARVVTAAALIMFFVFAAFVPEGAGVIKTIALGLAVGIFFDAFLV RMTLVPAAMALLGKRAWWIPRWLDRILPDVDIEGEGLRERQDDVDWARASGAAVATER LVVGVPGRRLAPVDLSAPAGSLVLVEGDVADRRLLGATLGARLAPLSGRAHVAGHPLA SEAGRVLTSVAMADLGRVDRVDSGVTVGDLLTERIDLSEPMGRRRGARARQAEWLGRI DQAADAAGARRIGADDPVGSLLPLERAIALTAVAASGRAPVLVLDVVDPFPDAAAERA FLAALPALVHESTTVLLGAPWFPDEHGIPGRPTVRLRLHAEDAPAPDADERPDTDQPV TTGKETRR" sig_peptide 1468227..1468364 /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /note="Signal peptide predicted for CMS1399 by SignalP 2.0 HMM (Signal peptide probability 0.900) with cleavage site probability 0.497 between residues 46 and 47" misc_feature order(1468284..1468343,1468740..1468808,1468821..1468889, 1468917..1468985,1469043..1469111,1469154..1469222, 1469319..1469387,1469808..1469876,1469895..1469963, 1470006..1470074,1470135..1470194,1470204..1470272) /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /note="12 probable transmembrane helices predicted for CMS1399 by TMHMM2.0 at aa 20-39, 172-194, 199-221,231-253, 273-295, 310-332, 365-387, 528-550, 557-579,594-616, 637-656 and 660-682" misc_feature 1468326..1468349 /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1468581..1468892 /locus_tag="CMS_1399" /old_locus_tag="CMS1399" /inference="protein motif:HMMPfam:PF03176" /note="HMMPfam hit to PF03176, MMPL, score 2.5e-08" gene 1471166..1473061 /locus_tag="CMS_1400" /old_locus_tag="CMS1400" /db_xref="GeneID:6157238" CDS 1471166..1473061 /locus_tag="CMS_1400" /old_locus_tag="CMS1400" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710127.1" /db_xref="GI:170781795" /db_xref="GeneID:6157238" /translation="MTTRTVRRRLAVALVAIVPLAVAGLFIGSLSDVAKGVERVPAAI VNQDEIVQQKAADGTESPVLAGRLLVTQLTSDDNQAFDWTITNADEAQRMRDDGEVYA VLTVPKDFSASIVSLSTDAPKRADISVKTDDAHGYLTGAATQAVGVGMTSVFGNAITS QFVSGIYTTFGGLKGSLTDAGAGADKLADGATQLSSGATTLGDGITQLGDGVGQSQQG ASKLADGLGTYTGGVSQLSSGLDRLQTGAAGLSQVSDGVGQYAGGAGQIAAQVQGIRQ QLAANPQSAPIAAQLEPLEQGLDQYAAQGQTLATQAAAGIQGVQQGIGQSASGASQLA ANGGALVSGARQLSDGLGQLRIGTTSAATGAGDLATGADALSSGATELGTGLTQGAEQ IPSLDADQASQASGVVADPVGLTVERENEIGNPGDAIAAIFVPIGLWLGAFATFLVLR PAARRLLASSAATGRVMGRVLARAALIALAQVVLLVALVHAALGLSLALLPATLGFAA VAAAAFTAIHYLLRQAFGRAGLVVSLILLAIQAAAMGGVIPLQLVAAPFQAISPFLPL TYAASGMQAIIAGGAPGVAWSAAGVLAVFLLLSLAVSYLVTRHSRRARSLGLVPGASP ASVAVAV" sig_peptide 1471166..1471273 /locus_tag="CMS_1400" /old_locus_tag="CMS1400" /note="Signal peptide predicted for CMS1400 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.224 between residues 36 and 37" misc_feature order(1471199..1471267,1472447..1472515,1472573..1472632, 1472660..1472728,1472747..1472815,1472915..1472983) /locus_tag="CMS_1400" /old_locus_tag="CMS1400" /note="6 probable transmembrane helices predicted for CMS1400 by TMHMM2.0 at aa 12-34, 428-450, 470-489,499-521, 528-550 and 584-606" gene 1473289..1474485 /locus_tag="CMS_1401" /old_locus_tag="CMS1401" /db_xref="GeneID:6157239" CDS 1473289..1474485 /locus_tag="CMS_1401" /old_locus_tag="CMS1401" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710128.1" /db_xref="GI:170781796" /db_xref="GeneID:6157239" /translation="MADPSAHAVSVVDDSTGRITGALPGAALGTHAGVIQMGHGRVAF VDESGPRLDVVDIASSGVLRIASSTPIPAVAGTWTRAGWIADDPGHRFVAVGSDIDGS TTQQVTVVDTRGHVARTATIRTSEVTLATTGARGTEEMETFLVGSPLRLVVTAGGRFD SYDVAAILRGDTAPAPVATTPLGAYPHGPVADARGTAIGSTLHDGIETVPLTRGGFGA SIARPYPEPAVQSYRPRMAPDGETAVGTQTGTGPGAPTLLTSSSMHGAGVASVALGSG TSTRAVVTPGYAAAVVTAGGVDTLSLVARGRAGLYDGTVTTVRLPALGQSPGAGSAAR FLAASDDGSELFLSRAGTGSVLEIDVAGTTATVRGTIAVPSALADGGYLATVDPHQRP YDLSGR" gene complement(1474562..1474864) /locus_tag="CMS_1402" /old_locus_tag="CMS1402" /db_xref="GeneID:6157240" CDS complement(1474562..1474864) /locus_tag="CMS_1402" /old_locus_tag="CMS1402" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710129.1" /db_xref="GI:170781797" /db_xref="GeneID:6157240" /translation="MSTTVHLEIQVDESRLADVADVLAETLQATRAFAGNEGLDVLVD DADPARMIVVEQWASTADHDAYVAWRATPEGAARLGEVLAAPPVTRVFSGRIALAL" misc_feature complement(1474634..1474834) /locus_tag="CMS_1402" /old_locus_tag="CMS1402" /inference="protein motif:HMMPfam:PF03992" /note="HMMPfam hit to PF03992, Antibiotic biosynthesis monooxygenase, score 1.6e-07" gene complement(1475057..1475902) /locus_tag="CMS_1403" /old_locus_tag="CMS1403" /db_xref="GeneID:6157241" CDS complement(1475057..1475902) /locus_tag="CMS_1403" /old_locus_tag="CMS1403" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710130.1" /db_xref="GI:170781798" /db_xref="GeneID:6157241" /translation="MYPQPVENAFVMAKRAGFDGVEIMVTNDEVTQDADALRALTEKH GLPILSIHAPVLLLTHFVWGRDPKVKLERSAELARAVGAPAVVVHPPFRWQAGYAESF LDIVRSIQAETGVEIAVENMFPWQVAGRSMKAYSPGWDPRDMDCGATTLDFSHASLSG QDTLEMAKALGPRLRHVHLCDGSGSQDDGRILDEHLLPGRGTQPVAETLRWLAEQGWQ GGVVAEVNTRKAKTEDQRLAMLIETREFAQRQLRLDTAPEKTPVAPPVVSGYQRLRTA LRRDR" misc_feature complement(1475294..1475875) /locus_tag="CMS_1403" /old_locus_tag="CMS1403" /inference="protein motif:HMMPfam:PF01261" /note="HMMPfam hit to PF01261, AP endonuclease, family 2,score 2.3e-28" gene 1476081..1476905 /locus_tag="CMS_1404" /old_locus_tag="CMS1404" /db_xref="GeneID:6157242" CDS 1476081..1476905 /locus_tag="CMS_1404" /old_locus_tag="CMS1404" /codon_start=1 /transl_table=11 /product="putative kinase" /protein_id="YP_001710131.1" /db_xref="GI:170781799" /db_xref="GeneID:6157242" /translation="MAAAGSGGHGSTDAFRKERLDAPRGFFEAEAAGLAWLAEVEPAG GARVVLVLDVAPGRIELERLAPARPTRDAARALGAALAVTHDAGAPAFGSPPAGLDGP AFIGRQSLSVLAGADAGDDPGEGWGAWYARERVLPYLRRAVDAGNATSAQAADVERAC DLAADGRFDDPAPPARIHGDLWSGNVQWTDTGAVLIDPAAHGGHRETDLAMLALFGCP GIDDVLGAYADTGSLGAGWRARMPLHQLHPLAVHAASHGPSYGDALHDAARAVLRM" misc_feature 1476090..1476902 /locus_tag="CMS_1404" /old_locus_tag="CMS1404" /inference="protein motif:HMMPfam:PF03881" /note="HMMPfam hit to PF03881, Fructosamine kinase, score 1.8e-05" gene 1477006..1478610 /locus_tag="CMS_1405" /old_locus_tag="CMS1405" /db_xref="GeneID:6157243" CDS 1477006..1478610 /locus_tag="CMS_1405" /old_locus_tag="CMS1405" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710132.1" /db_xref="GI:170781800" /db_xref="GeneID:6157243" /translation="MTPPPSSTPSATEPTTEPRTADAHDGDVEPGAYDLVVVSNRLPV DRVVAADGTTSWRHSPGGLVTALEPVMRANEGAWVGWPGIADHDVEPFVDAGISIIPV TLTEQDLAEYYEGFSNDTLWPLYHDVIAQPSYHREWWDTYVTVNQRFADAAAKAAAPG ATVWVQDYQLQLVPKMLREQRPDLTIGFFNHIPFPPYGIYSQLPWRTQIIEGLLGADV IGFQRVADAGNFTRAVRRLFGYTTRGSTVDVPVRGGIPLTVPGTKPSKPVRELRTRQV VAKHYPISIDARSYEEMAKDPAIQERARQIRADLGDPKTILLGVDRLDYTKGIGHRLK AFGELLAEGRVTVEDATLVQVASPSRERVETYKQLRDEIELTVGRINGDYGSISHTAI SYLHHGYPREEMVALCLAADVMLVTALRDGMNLVAKEYVATKHSNEGVLVLSEFAGAA DELKAALLVNPHDIEGLKEAILRAIEMPKAEQRKRMRSLRKRVFENDVTAWSSSFLAD LGRTHAASIHEGPDEEVVEPLMDEGW" misc_feature 1477102..1478538 /locus_tag="CMS_1405" /old_locus_tag="CMS1405" /inference="protein motif:HMMPfam:PF00982" /note="HMMPfam hit to PF00982, Glycosyl transferase,family 20, score 1.4e-186" gene 1478616..1479443 /locus_tag="CMS_1406" /old_locus_tag="CMS1406" /db_xref="GeneID:6157244" CDS 1478616..1479443 /locus_tag="CMS_1406" /old_locus_tag="CMS1406" /codon_start=1 /transl_table=11 /product="putative phosphatase" /protein_id="YP_001710133.1" /db_xref="GI:170781801" /db_xref="GeneID:6157244" /translation="MAELTTDIQAKGGRGFPGRLFEALTELARTPRLLVALDFDGTLA PEVDDPEKARAVPEARAAVLALLALPRTRVALVSGRALRSLEAVADLPDDVLLVGSHG VEIRLDTDDIELTLDEGELAQRGVLSDVLGQVADSLDEVWIEEKPAGFALHTRLATEK HSRIAHLVATQEAHAEVEGLKVRSGKDVLEFSVRHATKGEAVEHLRRYAEATAVFYAG DDVTDEDAFAALQAGDLGLKSGTGATAADFRVDGPHDVARVLQVLADLRAEPAVHPD" misc_feature 1478721..1479377 /locus_tag="CMS_1406" /old_locus_tag="CMS1406" /inference="protein motif:HMMPfam:PF02358" /note="HMMPfam hit to PF02358, Trehalose-phosphatase,score 2.5e-22" gene 1479536..1482526 /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /db_xref="GeneID:6157245" CDS 1479536..1482526 /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /note="subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali" /codon_start=1 /transl_table=11 /product="putative monovalent cation/H+ antiporter subunit A" /protein_id="YP_001710134.1" /db_xref="GI:170781802" /db_xref="GeneID:6157245" /translation="MFLLASVGIPLLARVLGVRAFVVAALVPAAAFAYTIAQGPTVLP DGEVVERVEWIPSLGITLDMRMDALSWLLSLVVTGVGALVLLYCARYFRSSEEGLGRF AGLLVAFAGVMFGLVLADDVFVLFTFWEATSVLSYLLIGHYTGKKASRGAALQALLVT TAGGLAMLVGLVILSVTGGTTSLAALVADPPGGPLIPVAIVLILLGALSKSALVPFHF WLPAAMAAPTPVSAYLHAAAMVKAGIYLIARLAPGYADVPGWRVLLVALGVATMLVGG WRALKQMDLKLVLAYGTVSQLGFLTVVVGYGTRDAALAGVALLLAHALFKATLFLVVG VVDHRAGTRDLRKISGLGRKAPVLAVIAALALASMAGLPPFLGFVAKEAVLTALLTDA EQGGGLGWVALVGVSVGSCLTVAYSARFMWGAFARKRGVAEVQPVHEHLDFLVPPAVL AVTGLVLGFLASSVDGWIAGYADTLPAVSAGASGEPDHTYHLALWHGIEPALLISAGT LVVGLTMFRLRDGVFALQSRVPSWIDAARIYWASMRLIDRVAARTTATTQRGSLPFYL GVILLVLIGSVGSALALNRSWPTTAVPFDHPAQPVIGVVMIVAAIAAARAGKRFQAVV LVGVTGYGMAALFALHGAPDLALTQVLIETITLVAFVLVLRRLPVRLGERNRSVHPIW RASIGIAVAALMSTVAVVALGARVASPISLEFPRLAYEQGHGSNVVNVTLVDLRGWDT MGEISVLIVAATGVASLIFLNRRTDSLPRLTAPSRRSLIARLAGRRDPQGAEAPLEVE HGVGGPRMDARDAVTDSHRDQRSPWLLAGRTLAPQNRSILLEVVVRLLFHSLIVVSVY LLFAGHNLPGGGFAGGLLAGMALVARYLAGGRYELGAAAPVDAGRVLGTGLVFAVGTA VVPLVFGADALTSTWIDTEVPFVGHVEFVTSTFFDVGVYLVVVGLTLDVLRSLGAEVD RQVESDRTVEQGADGMETEQGVSV" sig_peptide 1479536..1479634 /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /note="Signal peptide predicted for CMS1407 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.572 between residues 33 and 34" misc_feature order(1479569..1479637,1479737..1479796,1479830..1479889, 1479899..1479967,1480004..1480072,1480115..1480183, 1480220..1480279,1480307..1480375,1480394..1480462, 1480475..1480543,1480601..1480669,1480727..1480795, 1480856..1480924,1481009..1481077,1481216..1481284, 1481327..1481386,1481399..1481458,1481468..1481527, 1481588..1481656,1481756..1481815,1482044..1482112, 1482125..1482193,1482230..1482298,1482341..1482409) /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /note="24 probable transmembrane helices predicted for CMS1407 by TMHMM2.0 at aa 12-34, 68-87, 99-118, 122-144,157-179, 194-216, 229-248, 258-280, 287-309, 314-336,356-378, 398-420, 441-463, 492-514, 561-583, 598-617,622-641, 645-664, 685-707, 741-760, 837-859, 864-886,899-921 and 936-958" misc_feature 1479890..1480759 /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /inference="protein motif:HMMPfam:PF00361" /note="HMMPfam hit to PF00361,NADH/Ubiquinone/plastoquinone (complex I), score 4.2e-75" misc_feature 1482041..1482427 /gene="mnhA" /locus_tag="CMS_1407" /old_locus_tag="CMS1407" /inference="protein motif:HMMPfam:PF04039" /note="HMMPfam hit to PF04039, Na+/H+ antiporter MnhB subunit-related protein, score 1.6e-17" gene 1482523..1483080 /locus_tag="CMS_1408" /old_locus_tag="CMS1408" /db_xref="GeneID:6158815" CDS 1482523..1483080 /locus_tag="CMS_1408" /old_locus_tag="CMS1408" /codon_start=1 /transl_table=11 /product="putative Na(+)/H(+) antiporter subunit" /protein_id="YP_001710135.1" /db_xref="GI:170781803" /db_xref="GeneID:6158815" /translation="MSVSVTLIVIMAALYATGIYLMLERSMTRVLLGFLLVGNATNIL ILIMSGRVGLAPIYDPDVDPSEYADPLPQALILTAIVITFGVSAFLMALIYRSWRLAN ADVVTDDEDDLAMRGPRTGLGEEPTVPDDDDTEFGTNAEAAIASARKLRDNRSDLEEA IDDSADDDDRDFRTQRAEKRTGDDR" misc_feature order(1482532..1482591,1482610..1482678,1482736..1482804) /locus_tag="CMS_1408" /old_locus_tag="CMS1408" /note="3 probable transmembrane helices predicted for CMS1408 by TMHMM2.0 at aa 4-23, 30-52 and 72-94" misc_feature 1482538..1482873 /locus_tag="CMS_1408" /old_locus_tag="CMS1408" /inference="protein motif:HMMPfam:PF00420" /note="HMMPfam hit to PF00420, NADH-ubiquinone oxidoreductase, chain 4L, score 7.4e-10" gene 1483077..1484669 /locus_tag="CMS_1409" /old_locus_tag="CMS1409" /db_xref="GeneID:6157246" CDS 1483077..1484669 /locus_tag="CMS_1409" /old_locus_tag="CMS1409" /note="subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone" /codon_start=1 /transl_table=11 /product="putative monovalent cation/H+ antiporter subunit D" /protein_id="YP_001710136.1" /db_xref="GI:170781804" /db_xref="GeneID:6157246" /translation="MTIFQTLIPLVVLVPLLGAAAALVAARQRRLQVAVSVLALVIVV ALSAVLLVLVDQQGGQSVEVGGWAAPFGIVLVVDRLSALMLLISSIVLLAVLMFSIGQ GLEDGDGETPVSIFNPTYLILAAGVFNAFVAGDLFNLYVGFEILLVASYVLLTLGGTE ARIRAGVTYIVVSLVSSMLFLASIAMIYGALGTVNIAQISVRLDEIPPDVQLILHIML LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAILRTETVMFPTDQLS TALMVVAALTMVIGILGAVAQADIKRLLSFTLVSHIGYMIFGIALNTVAGMTATIYYV IHHIVVQTTLFLASGLIERTGGSTSINRLGGLLKAAPVMAILFFIPALNLGGIPPFSG FIGKVALFDSGAEVGGWLTYAVIAAGAATSLLTLYALARVWNMAFWRGAEEVEDYESP LLDQLSERPGGEAVTTVRKTPVLMTGATAGMVVVSVTLTVFAGPVYALAERAGESLTG PGSGNGSGELGYVETVFPGGVE" sig_peptide 1483077..1483154 /locus_tag="CMS_1409" /old_locus_tag="CMS1409" /note="Signal peptide predicted for CMS1409 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.376 between residues 26 and 27" misc_feature order(1483086..1483154,1483173..1483241,1483311..1483379, 1483413..1483472,1483482..1483550,1483569..1483637, 1483713..1483781,1483800..1483868,1483896..1483964, 1483983..1484051,1484061..1484129,1484190..1484258, 1484301..1484369,1484502..1484570) /locus_tag="CMS_1409" /old_locus_tag="CMS1409" /note="14 probable transmembrane helices predicted for CMS1409 by TMHMM2.0 at aa 4-26, 33-55, 79-101, 113-132,136-158, 165-187, 213-235, 242-264, 274-296, 303-325,329-351, 372-394, 409-431 and 476-498" misc_feature 1483473..1484324 /locus_tag="CMS_1409" /old_locus_tag="CMS1409" /inference="protein motif:HMMPfam:PF00361" /note="HMMPfam hit to PF00361,NADH/Ubiquinone/plastoquinone (complex I), score 1.8e-62" gene 1484666..1485340 /locus_tag="CMS_1410" /old_locus_tag="CMS1410" /db_xref="GeneID:6157247" CDS 1484666..1485340 /locus_tag="CMS_1410" /old_locus_tag="CMS1410" /note="subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport" /codon_start=1 /transl_table=11 /product="putative monovalent cation/H+ antiporter subunit E" /protein_id="YP_001710137.1" /db_xref="GI:170781805" /db_xref="GeneID:6157247" /translation="MSPRKARARAERLSLLVQLPLLVWLVILWLLLWGHVTVISVVTG IVLALLVTRVFYLPPVELSGRFDIRWAAILLGHFAVDLVRASFQVAAMAFDWRRVPVN SVIAVHLHTRSDFVMTLTAELVSLVPGSIVVEADRERSILYLHALGTSTPEEVERVRE TTLQVESRIVFTLGTADDVWRVNRDRRESGREPLLQTRTQRAHELVRDRDLEAGLITT TGEELA" sig_peptide 1484666..1484785 /locus_tag="CMS_1410" /old_locus_tag="CMS1410" /note="Signal peptide predicted for CMS1410 by SignalP 2.0 HMM (Signal peptide probability 0.915) with cleavage site probability 0.543 between residues 40 and 41" misc_feature order(1484702..1484761,1484771..1484836,1484873..1484941) /locus_tag="CMS_1410" /old_locus_tag="CMS1410" /note="3 probable transmembrane helices predicted for CMS1410 by TMHMM2.0 at aa 13-32, 36-57 and 70-92" gene 1485337..1485612 /locus_tag="CMS_1411" /old_locus_tag="CMS1411" /db_xref="GeneID:6157248" CDS 1485337..1485612 /locus_tag="CMS_1411" /old_locus_tag="CMS1411" /codon_start=1 /transl_table=11 /product="putative Na(+)/H(+) antiporter subunit" /protein_id="YP_001710138.1" /db_xref="GI:170781806" /db_xref="GeneID:6157248" /translation="MSIVMQVGWVVVGALFFSTAAMALVRIVRGPSILDRIIASDVLL TTLICVLGAEMVYNGHTRTVPVMLVLAMTAFLATVAVARYVSKQDPS" sig_peptide 1485337..1485423 /locus_tag="CMS_1411" /old_locus_tag="CMS1411" /note="Signal peptide predicted for CMS1411 by SignalP 2.0 HMM (Signal peptide probability 0.628) with cleavage site probability 0.229 between residues 29 and 30" misc_feature order(1485355..1485417,1485445..1485513,1485532..1485591) /locus_tag="CMS_1411" /old_locus_tag="CMS1411" /note="3 probable transmembrane helices predicted for CMS1411 by TMHMM2.0 at aa 7-27, 37-59 and 66-85" misc_feature 1485433..1485597 /locus_tag="CMS_1411" /old_locus_tag="CMS1411" /inference="protein motif:HMMPfam:PF04066" /note="HMMPfam hit to PF04066, Multiple resistance and pH regulation protein F, score 0.00059" gene 1485609..1486187 /locus_tag="CMS_1412" /old_locus_tag="CMS1412" /db_xref="GeneID:6157249" CDS 1485609..1486187 /locus_tag="CMS_1412" /old_locus_tag="CMS1412" /codon_start=1 /transl_table=11 /product="putative Na(+)/H(+) antiporter subunit" /protein_id="YP_001710139.1" /db_xref="GI:170781807" /db_xref="GeneID:6157249" /translation="MNGILVSGPLADALDVVSLVLLILGGVLSVAAGVGLLRFPDPLA RMHAATKPQILGVILVLLALALQSQSLSTVAMLVPVLLFQMLTAPISAHMVGRAGYRL RHFLREDLLVDELEEAIDRAHDELREADEVDASTLPVGSAENIAAEEAGHVTGGAGPR DAESHLAPTTAVPGPDGRDGDADAARLPPGIG" misc_feature 1485648..1485959 /locus_tag="CMS_1412" /old_locus_tag="CMS1412" /inference="protein motif:HMMPfam:PF03334" /note="HMMPfam hit to PF03334, Na+/H+ antiporter subunit,score 1.9e-21" misc_feature order(1485651..1485719,1485780..1485848) /locus_tag="CMS_1412" /old_locus_tag="CMS1412" /note="2 probable transmembrane helices predicted for CMS1412 by TMHMM2.0 at aa 15-37 and 58-80" gene 1486257..1487951 /gene="ilvD" /locus_tag="CMS_1413" /old_locus_tag="CMS1413" /db_xref="GeneID:6157250" CDS 1486257..1487951 /gene="ilvD" /locus_tag="CMS_1413" /old_locus_tag="CMS1413" /EC_number="4.2.1.9" /note="catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis" /codon_start=1 /transl_table=11 /product="dihydroxy-acid dehydratase" /protein_id="YP_001710140.1" /db_xref="GI:170781808" /db_xref="GeneID:6157250" /translation="MPEIDMKPRSRDVTDGIEATSSRGMLRAVGMGDEDWEKPQIGVA SSWNEVTPCNLSLDRLAQGAKEGVHAGGGYPLQFGTISVSDGIAMGHEGMHFSLVSRE VIADSVETVMMAERLDGSVLLAGCDKSLPGMLMAAARLDLSSVFLYAGSIAPGWVKLS DGTEKEVTIIDAFEAVGACKAGTMSQEDLTRIEKAICPGEGACGGMYTANTMASVAEA LGMSLPGSAAPPSADRRRDYFAHRSGEAVVNLIAKGITARDIMTKEAFENAISVVMAF GGSTNAVLHLLAIAREAEVDLQLSDFNRIADRVPHLGDLKPFGRFVMNDVDRVGGVPV VMKALLDAGLLHGDVMTVTGRTMRENLEAMDLADLDGTVIRKMDDPIHATGGISVLHG SLAPEGAVVKTAGFDLDVFEGPARVFERERAAMDALTEGRISKGDVIVIRYEGPKGGP GMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCIGHMAPEAVDAGPVAFVRDGD RIRVDIAARTLDLLVDEAELAARREGWAPLPPRYTRGVLAKYAKLVHSAAEGAITG" misc_feature 1486368..1487948 /gene="ilvD" /locus_tag="CMS_1413" /old_locus_tag="CMS1413" /inference="protein motif:HMMPfam:PF00920" /note="HMMPfam hit to PF00920, Dihydroxy-acid and 6-phosphogluconate dehydratase, score 0" misc_feature 1486632..1486664 /gene="ilvD" /locus_tag="CMS_1413" /old_locus_tag="CMS1413" /note="PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1." gene 1487996..1489831 /gene="ilvB" /locus_tag="CMS_1414" /old_locus_tag="CMS1414" /db_xref="GeneID:6158767" CDS 1487996..1489831 /gene="ilvB" /locus_tag="CMS_1414" /old_locus_tag="CMS1414" /EC_number="2.2.1.6" /note="acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate" /codon_start=1 /transl_table=11 /product="acetolactate synthase 1 catalytic subunit" /protein_id="YP_001710141.1" /db_xref="GI:170781809" /db_xref="GeneID:6158767" /translation="MPALPTPPPTPQAPTAHQGDEILTGAQAVVRTLELLGVDDIFGL PGGAILPTYDPLMDSTKLRHILVRHEQGAGHAAEGYASSSGRTGVCIATSGPGATNLV TAIADAYMDSVPLLAITGQVFSTLMGTDAFQEADIVGITMPITKHSFLVTRPEDIPST IASAYHIASTGRPGPVLVDITKDAQQLEAPFHWPPKIDLPGYRPVAKAHGKQIQAAAQ LLVEAKKPVLYVGGGVIRAKAHEELLALAEAVGAPVVTTLMARGAFPDSHPQQLGMPG MHGTVPAVLALQESDLLVSLGARFDDRVTGKASLFAPNAKVVHVDVDPAEISKIRIAD VPIVGDAKDVIADLAVAFREAKAASAVEQDIADWWTYLDGLREEFPLGYTPPEDGQLA PQYVIQRIGEITGPEGVFASGVGQHQMWAAQFIKYERPNSWLNSGGAGTMGYSVPAAM GAKVAQPDRHVWAIDGDGCFQMTNQELATCTINDIPIKVAIINNSSLGMVRQWQTLFY EGRYSNTDLNTGGGTRMVPDFVKMADAYGALGIRVTKPEEVDDAIRLALATNDRPVVI DFVVSRDAMVWPMVPQGLSNSAVQYARDHAPDWDDDLAETGRTEK" misc_feature 1488062..1488574 /gene="ilvB" /locus_tag="CMS_1414" /old_locus_tag="CMS1414" /inference="protein motif:HMMPfam:PF02776" /note="HMMPfam hit to PF02776, Pyruvate decarboxylase,score 1.8e-95" misc_feature 1488629..1489111 /gene="ilvB" /locus_tag="CMS_1414" /old_locus_tag="CMS1414" /inference="protein motif:HMMPfam:PF00205" /note="HMMPfam hit to PF00205, Pyruvate decarboxylase,score 7.5e-74" misc_feature 1489343..1489402 /gene="ilvB" /locus_tag="CMS_1414" /old_locus_tag="CMS1414" /note="PS00187 Thiamine pyrophosphate enzymes signature." gene 1489828..1490337 /gene="ilvH" /locus_tag="CMS_1415" /old_locus_tag="CMS1415" /db_xref="GeneID:6158765" CDS 1489828..1490337 /gene="ilvH" /locus_tag="CMS_1415" /old_locus_tag="CMS1415" /EC_number="2.2.1.6" /note="with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase 3 regulatory subunit" /protein_id="YP_001710142.1" /db_xref="GI:170781810" /db_xref="GeneID:6158765" /translation="MSHILSLLVEDKPGLLTRVAGLFARRGFNIESLAVGASEIEGLS RITVVVDVEALPLEQVTKQLNKLINVIKIVELDPGQAVEREHLLVKVRVDNVTRSQVL EAVNLFRARVVDVATDALIIEVTGDSGKAQALLRVLEPFGIKELAQSGLLAMGRGSKS ITDRVFRTA" misc_feature 1489834..1490055 /gene="ilvH" /locus_tag="CMS_1415" /old_locus_tag="CMS1415" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1.1e-19" gene 1490518..1491543 /gene="ilvC" /locus_tag="CMS_1416" /old_locus_tag="CMS1416" /db_xref="GeneID:6158769" CDS 1490518..1491543 /gene="ilvC" /locus_tag="CMS_1416" /old_locus_tag="CMS1416" /EC_number="1.1.1.86" /note="catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="YP_001710143.1" /db_xref="GI:170781811" /db_xref="GeneID:6158769" /translation="MTDIVYDKDADLSLIQGRKVAVIGYGSQGHAHALNLRDSGVEVV IGLKEGSTSRAKAEEQGFTVKTPSDASAWADVIVILAPDQHQRGLYADSVRDNLTEGK TLVFAHGFNIRFGYIEAPEGVDVVLVAPKGPGHTVRREFEAGRGVPVIVAVEVDASGK AWDLAWSYAKGIGGLRAGGIRTTFTEETETDLFGEQAVLCGGTSQLVQYGFETLIEAG YQPQIAYFEVLHELKLIVDLMWEGGIAKQRWSISDTAEYGDYVSGPRVISPDVKENMK AVLADIQSGAFADRFIKDQDAGAPEFLELRKKGEEHPIESTGRELRKLFAWNKADDDY TDGSVAR" misc_feature 1491067..1491504 /gene="ilvC" /locus_tag="CMS_1416" /old_locus_tag="CMS1416" /inference="protein motif:HMMPfam:PF01450" /note="HMMPfam hit to PF01450, Acetohydroxy acid isomeroreductase, score 1.2e-74" gene 1491758..1492198 /locus_tag="CMS_1417" /old_locus_tag="CMS1417" /db_xref="GeneID:6158766" CDS 1491758..1492198 /locus_tag="CMS_1417" /old_locus_tag="CMS1417" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710144.1" /db_xref="GI:170781812" /db_xref="GeneID:6158766" /translation="MPRRRPGASPATEGGRASALGATAARRAAASGAATSASDEPHAR AIDDGSAAPDASPEVVGLAFFGAVAVLEAIAWFFVVRDNPSSAGSAFQVGVAQATEAL TVLAPPLWVAAVVAALRGMRVGRRMVVLAAGAVVLFPWPWVVTR" sig_peptide 1491758..1491856 /locus_tag="CMS_1417" /old_locus_tag="CMS1417" /note="Signal peptide predicted for CMS1417 by SignalP 2.0 HMM (Signal peptide probability 0.947) with cleavage site probability 0.250 between residues 33 and 34" misc_feature order(1491932..1492000,1492043..1492111,1492136..1492189) /locus_tag="CMS_1417" /old_locus_tag="CMS1417" /note="3 probable transmembrane helices predicted for CMS1417 by TMHMM2.0 at aa 59-81, 96-118 and 127-144" gene 1492195..1492563 /locus_tag="CMS_1418" /old_locus_tag="CMS1418" /db_xref="GeneID:6157251" CDS 1492195..1492563 /locus_tag="CMS_1418" /old_locus_tag="CMS1418" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710145.1" /db_xref="GI:170781813" /db_xref="GeneID:6157251" /translation="MSGDRVPVADSATAPARARRGRPTRAGWVVGILGALAHGVLVWQ AVDQYTAFRDIATAFGGSLRPGTLATLVGAILVPVVAFVLAALATRGRPVPARVLVML AGLAAASALTVGLAELLPLV" misc_feature order(1492270..1492329,1492387..1492455,1492474..1492542) /locus_tag="CMS_1418" /old_locus_tag="CMS1418" /note="3 probable transmembrane helices predicted for CMS1418 by TMHMM2.0 at aa 26-45, 65-87 and 94-116" gene complement(1492574..1492975) /locus_tag="CMS_1419" /old_locus_tag="CMS1419" /db_xref="GeneID:6157252" CDS complement(1492574..1492975) /locus_tag="CMS_1419" /old_locus_tag="CMS1419" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710146.1" /db_xref="GI:170781814" /db_xref="GeneID:6157252" /translation="MSDVTWAAIQLAVRILLALVFIGMGVNHFVPKAAQAMAAIIPPS FRRPGVPSPLALVRFTGLCEIAGGIGLLVEPVRLVAGIALAVFLVAVFPANAFAARHP DRFGRIAIPLVPRLVAQVVLIALVLFAGWPL" misc_feature complement(order(1492583..1492642,1492679..1492747, 1492757..1492816,1492898..1492966)) /locus_tag="CMS_1419" /old_locus_tag="CMS1419" /note="4 probable transmembrane helices predicted for CMS1419 by TMHMM2.0 at aa 4-26, 54-73, 77-99 and 112-131" misc_feature complement(1492865..1492957) /locus_tag="CMS_1419" /old_locus_tag="CMS1419" /note="PS00044 Bacterial regulatory proteins, lysR family signature." gene 1493038..1494627 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /db_xref="GeneID:6157253" CDS 1493038..1494627 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /EC_number="1.1.1.95" /note="catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="YP_001710147.1" /db_xref="GI:170781815" /db_xref="GeneID:6157253" /translation="MTKPVVVIAEELSPATVDALGPDFDVRSVDGTDRPALLAALAEA DAVLVRSATKIDAEAIAAAPRLQVVARAGVGLDNVDIKAATTAGVMVVNAPTSNVISA AELAIGHILSLARFIPDASASLKQGLWKRSSFTGVELYEKTIGIVGLGRIGTLVAQRL AGFGATLVAYDPYVTPARAQQLGVQLLPLDELMKASDFITIHIPKTPDTTGLISTEQF ALAKPSLRIVNASRGGIIDEDALYTALKSKRIAGAGLDVFVSEPPTGSPLLEVDNIIV TPHLGASTDEAQEKAGVSVARSVRLALGGELVPDAVNVAGGVIDPYVRPGIPLMEKLG QVFSGLAHEALTSIDVVVRGELAGYDVSVLKLAALKGVFTNVVSENVSYVNAPLLAEQ RGLEVRLITDAVSEEYRNVLSIRGALSDGTQVSVSGTLTGTKQIEKLVEIDGYDVEVP FSRHLIVMKYEDRPGIVAVYGKEFGDAEVNIAGMQIARQEAGGRALSVLSVDSPVPDG VLENVRRAIQTTSLREIDIAD" misc_feature 1493047..1493325 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /inference="protein motif:HMMPfam:PF00389" /note="HMMPfam hit to PF00389, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region, score 1.2e-21" misc_feature 1493341..1493874 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /inference="protein motif:HMMPfam:PF02826" /note="HMMPfam hit to PF02826, D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding, score 2.2e-60" misc_feature 1493467..1493550 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /note="PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature." misc_feature 1493698..1493748 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /note="PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3." misc_feature 1494397..1494612 /gene="serA" /locus_tag="CMS_1420" /old_locus_tag="CMS1420" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 3.5e-08" gene complement(1494720..1495343) /locus_tag="CMS_1421" /old_locus_tag="CMS1421" /db_xref="GeneID:6158986" CDS complement(1494720..1495343) /locus_tag="CMS_1421" /old_locus_tag="CMS1421" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710148.1" /db_xref="GI:170781816" /db_xref="GeneID:6158986" /translation="MPATPPDDPARAPEPDAGSDPASSSAGSARDRILDAFEELLVQQ GERGTTLESVAAAAGVSKGGLLYHFGGKEALVDGLLARMAALAQADVARLRAAERGPV DLWIRSSLSTATPFDRAYVATSRLAQGNHPRARDTLTHLQDEWAAVILEAVGDPAVAR AVLLIGDGLYYNSALQPWLGGSAPADEALDELIRVVDDLVRIRSTRG" misc_feature complement(1495107..1495247) /locus_tag="CMS_1421" /old_locus_tag="CMS1421" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 4.3e-14" misc_feature complement(1495134..1495199) /locus_tag="CMS_1421" /old_locus_tag="CMS1421" /note="Predicted helix-turn-helix motif with score 1164.000, SD 3.15 at aa 49-70, sequence TTLESVAAAAGVSKGGLLYHFG" gene 1495464..1497005 /locus_tag="CMS_1422" /old_locus_tag="CMS1422" /db_xref="GeneID:6157254" CDS 1495464..1497005 /locus_tag="CMS_1422" /old_locus_tag="CMS1422" /codon_start=1 /transl_table=11 /product="putative efflux protein" /protein_id="YP_001710149.1" /db_xref="GI:170781817" /db_xref="GeneID:6157254" /translation="MSTPRTASVPVTAVAGRAGRRQWAALVVLMLPVLLVSIDNTVLS FAMPSIARDLEPSGAAQLWIIDAYPLVLAGLLVAMGNMGDRYGRRRLLMIGAAGFGLV SALAAFATDASQLIAARAALGFFGAMLMPSTLSLLRSIFTDRKQRRLAIAIWASGFSG GSALGPLVGGVLLDNFWWGSVFLVAVPVLLPLLILTPVLVPESKDPAPGPIDGIAILL SLATVAPIVYAIKTFATEGVTPLAIAAPVVGVVAGILFVRRMSRARNPMLDVALFREP VFTGAVLVNLLSVVSLVGFLFFVTQHLQLVAGLDPLAAGFALIPGSVVVIVSGLVIVP IVARARPSRVVAIALAFSAVAYVILAATGRGASVGLLVFAFCLLGAGIGASQTISNDL IIAAVPPAKAGAASAVSETAYEVGAVLGTAVLGSILTASYRTGLVLPAGLSDGDASAA RETLGGAVSVAERVPADVGAALLESAHQAFDGGVVTTSIIGAALMVGAIVISLTSLRR ASSHD" sig_peptide 1495464..1495601 /locus_tag="CMS_1422" /old_locus_tag="CMS1422" /note="Signal peptide predicted for CMS1422 by SignalP 2.0 HMM (Signal peptide probability 0.708) with cleavage site probability 0.344 between residues 46 and 47" misc_feature order(1495536..1495604,1495632..1495700,1495734..1495793, 1495806..1495874,1495911..1495979,1495992..1496060, 1496079..1496147,1496175..1496234,1496295..1496363, 1496406..1496474,1496493..1496546,1496556..1496615, 1496706..1496774,1496913..1496981) /locus_tag="CMS_1422" /old_locus_tag="CMS1422" /note="14 probable transmembrane helices predicted for CMS1422 by TMHMM2.0 at aa 25-47, 57-79, 91-110, 115-137,150-172, 177-199, 206-228, 238-257, 278-300, 315-337,344-361, 365-384, 415-437 and 484-506" misc_feature 1495548..1496750 /locus_tag="CMS_1422" /old_locus_tag="CMS1422" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(1497043..1497333) /locus_tag="CMS_1423" /old_locus_tag="CMS1423" /db_xref="GeneID:6157255" CDS complement(1497043..1497333) /locus_tag="CMS_1423" /old_locus_tag="CMS1423" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710150.1" /db_xref="GI:170781818" /db_xref="GeneID:6157255" /translation="MPTPTARQKDTTMSIGLGIFLVVLRAILAFAVDITVPGVDLQLV GYILMGSGALVIIIGVALLARRRTAVSETRTSIDPATGQRVTRRERSDDNLI" sig_peptide complement(1497043..1497135) /locus_tag="CMS_1423" /old_locus_tag="CMS1423" /note="Signal peptide predicted for CMS1423 by SignalP 2.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.953 between residues 31 and 32" misc_feature complement(order(1497142..1497210,1497238..1497297)) /locus_tag="CMS_1423" /old_locus_tag="CMS1423" /note="2 probable transmembrane helices predicted for CMS1423 by TMHMM2.0 at aa 13-32 and 42-64" gene 1497403..1498470 /gene="leuB" /locus_tag="CMS_1424" /old_locus_tag="CMS1424" /db_xref="GeneID:6157256" CDS 1497403..1498470 /gene="leuB" /locus_tag="CMS_1424" /old_locus_tag="CMS1424" /EC_number="1.1.1.85" /note="catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="YP_001710151.1" /db_xref="GI:170781819" /db_xref="GeneID:6157256" /translation="MPRTISLAVVPGDGIGPEVVHEALRVLREAVPADVSLDTTQYPF GAGHFLETGQILTDSDLAALAQHDAILLGAVGGDPRDARLAGGIIERGLLLKLRFAFD HYINLRPTALLPGVASPLAAPGQVDFVVVREGTEGPYAGNGGVLRRGTEHEIATEVSV NTAHGVERTVRFAFELAEKRDRKRVTLVHKTNVLTFAGSLWQRTVDRVAAEHPDVTVD YLHVDATMIFLVTDPSRFDVIVSDNLFGDIITDLAAAISGGIGLAASGNVNPTGAFPS MFEPVHGSAPDIAGQQKADPTAAILSVALLLDHLGLSEAAARVSAAVSDDLAARATGD AAPRSTAEVGDAILRALSTNH" misc_feature 1497418..1498443 /gene="leuB" /locus_tag="CMS_1424" /old_locus_tag="CMS1424" /inference="protein motif:HMMPfam:PF00180" /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate dehydrogenase, score 1e-97" misc_feature 1498129..1498188 /gene="leuB" /locus_tag="CMS_1424" /old_locus_tag="CMS1424" /note="PS00470 Isocitrate and isopropylmalate dehydrogenases signature." gene 1498479..1499648 /gene="ilvE" /locus_tag="CMS_1425" /old_locus_tag="CMS1425" /db_xref="GeneID:6158785" CDS 1498479..1499648 /gene="ilvE" /locus_tag="CMS_1425" /old_locus_tag="CMS1425" /EC_number="2.6.1.42" /note="catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids" /codon_start=1 /transl_table=11 /product="branched-chain amino acid aminotransferase" /protein_id="YP_001710152.1" /db_xref="GI:170781820" /db_xref="GeneID:6158785" /translation="MSSTSSTASTSSTASTSGTASTSSTGTAFPLSFEQTPSESARAD AEREAILADPGFGKHFTDHMVQIDWTLDAGWHDARVVPYGPLQLDPAASVLHYGQEIF EGMKAYRHADGSVWTFRPDRNAARLQRSARRLALPELPTEDFVESVTQLVRADIDWVP SAAEQSLYLRPFMIANESFLGVRAAQRVGYYVIASPAGAYFTGGVAPVSIWLSTQYSR AGKGGTGAAKCGGNYAASLLPQAEAASHGCAQVLFLDSEEGRYLEELGGMNIVLVYED GRLVTPDSESILEGITRDSILELARDRGLTVEKRRVTLAEWADGIESGEITEVFACGT AAVITPIGRLMGDDLDVGDIDAPAGELTMSLRQELTDIQYGRIPDRHGWLTRLDA" sig_peptide 1498479..1498607 /gene="ilvE" /locus_tag="CMS_1425" /old_locus_tag="CMS1425" /note="Signal peptide predicted for CMS1425 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.365 between residues 43 and 44" misc_feature 1498707..1499588 /gene="ilvE" /locus_tag="CMS_1425" /old_locus_tag="CMS1425" /inference="protein motif:HMMPfam:PF01063" /note="HMMPfam hit to PF01063, Aminotransferase, class IV,score 7.8e-116" gene 1499706..1500479 /locus_tag="CMS_1426" /old_locus_tag="CMS1426" /db_xref="GeneID:6158768" CDS 1499706..1500479 /locus_tag="CMS_1426" /old_locus_tag="CMS1426" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710153.1" /db_xref="GI:170781821" /db_xref="GeneID:6158768" /translation="MKIARFSTGDDPRFGILDEEEGHLVVLSGDPMFSGYQTTGERVP LADARLLAPVIPRSKVVAVGRNYAAHAAEHGSEAPTTPLIFLKPNTSVIGPDDAIRLP ADSERVEHEGELAVVIGRITRDVSVEDAARSIFGFTIGNDVTARDIQHSESQWARAKG YDTFCPLGPVIETEGSFEDALIETRVDGELRQSGRTSEMVHTVPELIAFASRVWTLLP GDVILTGTPAGVGPFTDGQVVEVSIEGIGTLSNPARARA" misc_feature 1499925..1500410 /locus_tag="CMS_1426" /old_locus_tag="CMS1426" /inference="protein motif:HMMPfam:PF01557" /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) hydrolase, score 1.3e-75" gene 1500482..1501255 /locus_tag="CMS_1427" /old_locus_tag="CMS1427" /db_xref="GeneID:6157257" CDS 1500482..1501255 /locus_tag="CMS_1427" /old_locus_tag="CMS1427" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710154.1" /db_xref="GI:170781822" /db_xref="GeneID:6157257" /translation="MIRTGRAARLALAAAAVALLSGCVYDVSDYGLETPDASAPPSAA LTPSPTPGAAELGLPAGCTPADLSIDWAEPAAGPVDELLAVRVMTVRIPSAGEQPGLG STTQRVTRVDTALRPALRLELDKRDGSATPVADSLAPPDTWAAFLAADLRDRDLVGPL FGWPLQITSFDPVLDRAARYVIGYLGSAQSAHVTVTGCDGAFRGSGTLEGLDPTRYAG AVLLECGVPPGDQYDRWDLLEPYCADGQPGTAGQATPAP" sig_peptide 1500482..1500640 /locus_tag="CMS_1427" /old_locus_tag="CMS1427" /note="Signal peptide predicted for CMS1427 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.525 between residues 53 and 54" misc_feature 1500518..1500550 /locus_tag="CMS_1427" /old_locus_tag="CMS1427" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1501269..1502789 /gene="gltX" /locus_tag="CMS_1428" /old_locus_tag="CMS1428" /db_xref="GeneID:6157258" CDS 1501269..1502789 /gene="gltX" /locus_tag="CMS_1428" /old_locus_tag="CMS1428" /EC_number="6.1.1.17" /note="Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="YP_001710155.1" /db_xref="GI:170781823" /db_xref="GeneID:6157258" /translation="MTETTAHPVTTATGTDVRVRFCPSPTGTPHVGLIRTALFNWAYA RHTGGKLVFRVEDTDAARDSEESYEQLIEALRWLEIDWDEGEGVGGPHAPYRQSQRTD LYLDVIAKLTASGHLYESFATAEEIEARNRAAGRDPKMGYDNFERDLTEEERQAFRDE GRSPALRLRVPDTDLSFDDLVRGTVTFPAGSFPDFVLVRPNGAPLYTLVNPVDDALMG ITHVLRGEDLLSSTPRQIALYHALIDIGVADAIPRFGHLPYVMGEGNKKLSKRDPESN LFHHRDRGFIPEGLINYLALLGWSLTHDRDVFSRMEMVTAFDVADVNPNPARFDLKKA ESLNGDHIRLLALDDFAQRLVPYLQAADVVGAELTHDQRRMLEAAAPLVQERMQLLGE APDLLSFLFTTADELPYDDAAVQALKDDAPEVLAASRGALSGVPHTQWDIDLVQEVLQ NTLITGMGMKPRLAYGPLRVGISGRRISPPLFESMVLLGKDETIARLDRLAGMLGE" misc_feature 1501314..1502276 /gene="gltX" /locus_tag="CMS_1428" /old_locus_tag="CMS1428" /inference="protein motif:HMMPfam:PF00749" /note="HMMPfam hit to PF00749, Glutamyl-tRNA synthetase,class Ic, score 8.5e-100" gene 1502827..1503747 /locus_tag="CMS_1429" /old_locus_tag="CMS1429" /db_xref="GeneID:6158728" CDS 1502827..1503747 /locus_tag="CMS_1429" /old_locus_tag="CMS1429" /codon_start=1 /transl_table=11 /product="putative pyridine nucleotide-disulfide oxidoreductase" /protein_id="YP_001710156.1" /db_xref="GI:170781824" /db_xref="GeneID:6158728" /translation="MTGDSYDVVVIGAGPAGLSAALNLVRARRRTLVLDSSRPRNAAT LMSHGFVTRDGISPLELRKLGQVEVESYDEGEFQLAVVQSAEPAEGGFTIRAKGVRRA PDREVHARRILIATGLVETLPDLPSIRAYYGTAVHSCMECDGYEKADEPLFLIGETDD LVERALLLSQWSRDIVVFTNGVAHIDEAGERGLASLGIRVDRRPVADIEGERAVVTGI RMQDGSVVPRTGGFVRPRYSTALDFLAGLDLDTDHDGHIAVDAEGRTSHAGVYAAGDS SQPGPQQLIIAAGFGARAASAINRDLLPRI" misc_feature 1502845..1503684 /locus_tag="CMS_1429" /old_locus_tag="CMS1429" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.5e-07" misc_feature 1503817..1505122 /note="submitted with no further information" gene 1503838..1503909 /locus_tag="CMS_r023" /old_locus_tag="CMSr023" /db_xref="GeneID:6157259" tRNA 1503838..1503909 /locus_tag="CMS_r023" /old_locus_tag="CMSr023" /product="tRNA-Gln" /db_xref="GeneID:6157259" gene complement(1503998..1504303) /locus_tag="CMS_1430" /old_locus_tag="CMS1430" /db_xref="GeneID:6159036" CDS complement(1503998..1504303) /locus_tag="CMS_1430" /old_locus_tag="CMS1430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710157.1" /db_xref="GI:170781825" /db_xref="GeneID:6159036" /translation="MTHDPSTPEDQDIEAQKHRNDDAELPSHVVDDHRSDLCASCDVS RKLLRAVTRIHQTDHRPGEHTGHEAENRYLAKRLHDRSRGHVLLGAARCQSHGNHTS" gene 1504302..1505057 /locus_tag="CMS_1431" /old_locus_tag="CMS1431" /db_xref="GeneID:6157260" misc_feature order(1504335..1504403,1504431..1504499,1504581..1504649, 1504677..1504745,1504782..1504850,1504860..1504928) /locus_tag="CMS_1431" /old_locus_tag="CMS1431" /note="6 probable transmembrane helices predicted for CMS1431 by TMHMM2.0 at aa 12-34, 44-66, 94-116, 126-148,161-183 and 187-209" CDS 1504338..1505057 /locus_tag="CMS_1431" /old_locus_tag="CMS1431" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710158.1" /db_xref="GI:170781826" /db_xref="GeneID:6157260" /translation="MAAEMLAASIVPAFVLTLVAAFSDVRRVGALVAEVPAVTLTIFL AAQLGCFLAFDEDEKLAAAKRIRTWGRHRLAAVRRRSEVPVAMVVVTNSVVGMALATC LYSVTGGPLATIPAAVLLAACGAALGVFAGFHVVRDRYRAKTAFERASVYILSAMAVI VVITLGAFMLGNYAASGAASLVSSFAFMLASAFLPLGKSSPPWIRNWTLRGAAARSAA VYLSKRYAKAVAEMTELTKAG" misc_feature 1504911..1504934 /locus_tag="CMS_1431" /old_locus_tag="CMS1431" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1505130..1506140) /locus_tag="CMS_1432" /old_locus_tag="CMS1432" /db_xref="GeneID:6157261" CDS complement(1505130..1506140) /locus_tag="CMS_1432" /old_locus_tag="CMS1432" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710159.1" /db_xref="GI:170781827" /db_xref="GeneID:6157261" /translation="MEFRYLGNSGFKISEITYGNWLTHGSQVENDTATACVKAALEAG ITTFDTADVYANTKAETVLGEALKDERRASIEIFTKVFGPTGPKGHNDVGLSRKHIMD SVHASLQRLQTDYIDLYQAHRFDYETPLEETMQAFADVVRQGKALYIGVSEWTPAQLR EAHGLSRELGFQLISNQPQYSALWRVIEEEVVPTSAELGISQIVWSPIAQGVLTGKYK PGQDLPAGSRATDDKGGADMISRFMNDDTLTRVQALQPVADELDLSLAQLAVAWVLQN ENVASAIIGASRPEQVHENVKASGMKIPAELLTRIDDALGDIVEKDPSKTSESSPKGR LA" misc_feature complement(1505193..1506122) /locus_tag="CMS_1432" /old_locus_tag="CMS1432" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 2.3e-76" gene complement(1506195..1506809) /locus_tag="CMS_1433" /old_locus_tag="CMS1433" /db_xref="GeneID:6157262" CDS complement(1506195..1506809) /locus_tag="CMS_1433" /old_locus_tag="CMS1433" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710160.1" /db_xref="GI:170781828" /db_xref="GeneID:6157262" /translation="MAEPRITERGRRTRQRIIEATGEQILATGIGGTTLDDVRAATLT SKSQLFHYFPGGKIELVREVAEWEGRQLMEAQEPHIHDLGSWDSWEAWRTGLVDYYIG RGRWACPIGSLATQAAAVDAELERTIAASMRAWRAFLARGVERMREAGLVAATADPER IATVILAAIQGGLVLSQPERSAWPLEAALDTALAPLHVIRSPTA" misc_feature complement(1506618..1506761) /locus_tag="CMS_1433" /old_locus_tag="CMS1433" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 6.5e-07" gene 1506865..1507662 /locus_tag="CMS_1434" /old_locus_tag="CMS1434" /db_xref="GeneID:6157263" CDS 1506865..1507662 /locus_tag="CMS_1434" /old_locus_tag="CMS1434" /codon_start=1 /transl_table=11 /product="putative short chain oxidoreductase" /protein_id="YP_001710161.1" /db_xref="GI:170781829" /db_xref="GeneID:6157263" /translation="MQSNAEVLQSLVLDTRLAGRTAVVTGSTSGIGEAVARVLASSGA EVVVSGRDVERARAVVAAITATGGTAHAVPADLAGGYDGIRAFARDATAALGGRVDIL VNNTGVYPVGATAGLADDDLDAILAVNVRAPHVLVAELAPAMASRGTGAIVNVGSWMS RVGIPFGAAYTASKAAIEQMTRTWAAEYGPRGVHVNTVAPGATSTPGNAADADAVAAM AASTVVGVPVRPVDIAFAVRYLVSDEAAFIHGALLDVDGGIGGTRLG" misc_feature 1506928..1507641 /locus_tag="CMS_1434" /old_locus_tag="CMS1434" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 5.3e-61" misc_feature 1507333..1507419 /locus_tag="CMS_1434" /old_locus_tag="CMS1434" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene complement(1507731..1508834) /locus_tag="CMS_1435" /old_locus_tag="CMS1435" /db_xref="GeneID:6157264" CDS complement(1507731..1508834) /locus_tag="CMS_1435" /old_locus_tag="CMS1435" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710162.1" /db_xref="GI:170781830" /db_xref="GeneID:6157264" /translation="MDVPFWLWAATVAAVLGLLVFDFFAHVRKAHEPTLKESATWSVV YIVIALVFGVGVGVFSNWTFGGEYFAGYVTEKALSVDNLFVFLIIMSSFAVPRAFQQK VLLVGIAIALVMRGIFIAMGSAIIDNFSWVFYLFGALLLVMAYKQMKETHDADESDSK LIRTLRRFIPTSDHYDGDKLTTRVDGKKLFTPMFLVMLAIGLTDVLFALDSIPAIFGL TQEAYIVFTANAFALLGLRQLYFLISGLLERLIYLSQGLAVILGFIAVKLVLHAMHVN EVPFINGGEPMLWAPEIPIWFSLSFILLTITVATVASLAKTKRDASAVEGTDSATAVA GEKAPAGADDDAARGSGRSVDVSRDADADAPRR" sig_peptide complement(1507731..1507820) /locus_tag="CMS_1435" /old_locus_tag="CMS1435" /note="Signal peptide predicted for CMS1435 by SignalP 2.0 HMM (Signal peptide probability 0.641) with cleavage site probability 0.474 between residues 30 and 31" misc_feature complement(order(1507890..1507958,1508016..1508084, 1508103..1508171,1508214..1508270,1508400..1508450, 1508460..1508528,1508547..1508606,1508649..1508717, 1508754..1508822)) /locus_tag="CMS_1435" /old_locus_tag="CMS1435" /note="9 probable transmembrane helices predicted for CMS1435 by TMHMM2.0 at aa 5-27, 40-62, 77-96, 103-125,129-145, 189-207, 222-244, 251-273 and 293-315" misc_feature complement(1507896..1508636) /locus_tag="CMS_1435" /old_locus_tag="CMS1435" /inference="protein motif:HMMPfam:PF03741" /note="HMMPfam hit to PF03741, Integral membrane protein TerC, score 1e-81" gene complement(1509063..1509491) /locus_tag="CMS_1436" /old_locus_tag="CMS1436" /db_xref="GeneID:6157265" CDS complement(1509063..1509491) /locus_tag="CMS_1436" /old_locus_tag="CMS1436" /codon_start=1 /transl_table=11 /product="putative sortase-sorted membrane protein" /protein_id="YP_001710163.1" /db_xref="GI:170781831" /db_xref="GeneID:6157265" /translation="MDGMDGLAAASLIVEFLTWIALVPGILLYVAGLSVRVVGRRWTA TEGLVADEPAREDGAAPERVLRWFDGDGDVHEAPADTPETHDLAAGSDVRVWFSPRSP WRVRTHAPELDGRALRVTGLVLIGIGALAAVAGIVLLFLE" misc_feature complement(order(1509069..1509137,1509396..1509464)) /locus_tag="CMS_1436" /old_locus_tag="CMS1436" /note="2 probable transmembrane helices predicted for CMS1436 by TMHMM2.0 at aa 10-32 and 119-141" gene complement(1509519..1510169) /locus_tag="CMS_1437" /old_locus_tag="CMS1437" /db_xref="GeneID:6157266" CDS complement(1509519..1510169) /locus_tag="CMS_1437" /old_locus_tag="CMS1437" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710164.1" /db_xref="GI:170781832" /db_xref="GeneID:6157266" /translation="MAPLMRLTKLEHAALVLELNGRKLFIDPGSFTTPITEAMNADAI VITHEHPDHWTPEQLKRILDRNEGVPIYAPEGVAAAAGDFDVTVVHAGDTVEAGPFTL RFFGGTHAVIHDSIPVVDNLGVLVNETLYYAGDSFTIPEGVDVDLLAAPAGAPWMKIS ESIDYVLAVKPRRAFPTHEMVLSAAGKGISNGRLQWATEQGGGEFHALEPGDSIDL" misc_feature complement(1509636..1510139) /locus_tag="CMS_1437" /old_locus_tag="CMS1437" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 3.1e-05" gene 1510337..1510409 /locus_tag="CMS_r024" /old_locus_tag="CMSr024" /db_xref="GeneID:6157267" tRNA 1510337..1510409 /locus_tag="CMS_r024" /old_locus_tag="CMSr024" /product="tRNA-Glu" /db_xref="GeneID:6157267" gene 1510552..1511328 /locus_tag="CMS_1438" /old_locus_tag="CMS1438" /db_xref="GeneID:6159038" CDS 1510552..1511328 /locus_tag="CMS_1438" /old_locus_tag="CMS1438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710165.1" /db_xref="GI:170781833" /db_xref="GeneID:6159038" /translation="MPGARRTSAHGRALYRRGVSVHLVGGGLSDDDTPLLARFLSEAT TRATDAARLEPARIAVVLVHDGLGAEWFDQYAAALRAAGACEPVAVLAPEGGSIEVAQ LQDVDGIVVGGGLTPAYRQALEPVFGEIRRQVTAGVPYLGFSAGAAVAAETAIVGGWR IGDVEVVQESASEDLDEVTVEQGIGLIDVAVDVHAAQWGTLTRLIAATEAGLVEGGVA IDEGTVLIVGEGQLVVEGRGSVWSVIGSETGVTVSSAGAS" gene 1511339..1512025 /gene="ung" /locus_tag="CMS_1439" /old_locus_tag="CMS1439" /db_xref="GeneID:6157268" CDS 1511339..1512025 /gene="ung" /locus_tag="CMS_1439" /old_locus_tag="CMS1439" /EC_number="3.2.2.-" /note="Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="YP_001710166.1" /db_xref="GI:170781834" /db_xref="GeneID:6157268" /translation="MPLTLPELVERGLMDAGWAGVLAPVAETIARMGEWLRAEVAAGR PYLPAGDRVLRAFQQPLADVRVLIVGQDPYPTPGHPVGLSFSVEPDVRPVPRSLVNIH RELRDDLGIPTPEHGDLTAWTRSGVLLLNRVLTVRPGAPASHRGKGWEAVTECAIRGL AARGGPLVAILWGKDAGSLAPLLAPVPSITSVHPSPLSASRGFFGSKPFSRADALLAE QGADPVDWRL" misc_feature 1511513..1511989 /gene="ung" /locus_tag="CMS_1439" /old_locus_tag="CMS1439" /inference="protein motif:HMMPfam:PF03167" /note="HMMPfam hit to PF03167, Uracil-DNA glycosylase superfamily, score 2.3e-52" misc_feature 1511531..1511560 /gene="ung" /locus_tag="CMS_1439" /old_locus_tag="CMS1439" /note="PS00130 Uracil-DNA glycosylase signature." gene 1512079..1512768 /locus_tag="CMS_1440" /old_locus_tag="CMS1440" /db_xref="GeneID:6159085" CDS 1512079..1512768 /locus_tag="CMS_1440" /old_locus_tag="CMS1440" /note="Lacks the appropriate stop codon so may be non-functional." /codon_start=1 /transl_table=11 /product="putative acetyltransferase protein (toxin resistance)" /protein_id="YP_001710167.1" /db_xref="GI:170781835" /db_xref="GeneID:6159085" /translation="MLEEEYQTRRRLPAHLRKPAPPLPVFSYEIRPAVTSDLPDIREI YNHYVMNSTVTFDETRMTLARWRGRFGQLERMGMPFLVAVSPSGQVLGYALVEPVGNR RSSRTTVEDSIYLGAASTGKGLGRALLVALVDACREARIREVIAVIADQGADASIRLH ASLGFTESGRMGRVGWKFGRWLGTVTMQLTLKPAERPSLWERTRRRATPGAAAPRPTT PAPAPAAPPSR" misc_feature 1512322..1512576 /locus_tag="CMS_1440" /old_locus_tag="CMS1440" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 6.7e-12" gene complement(1512650..1514002) /locus_tag="CMS_1441" /old_locus_tag="CMS1441" /db_xref="GeneID:6157269" CDS complement(1512650..1514002) /locus_tag="CMS_1441" /old_locus_tag="CMS1441" /codon_start=1 /transl_table=11 /product="putative integral membrane protease" /protein_id="YP_001710168.1" /db_xref="GI:170781836" /db_xref="GeneID:6157269" /translation="MPLLREVGVAGLVVPLVLVLVLLHGCASRPDHRTRTHGDDGVPS TLRRALRRAPSAIGWIRARHHPAYRGGMSAQEPTTPDHAENPGPPVAPPVDPGAPPAA GTPGTLPPELPPLPERPPVPYHHGLRDTGGPWRGIVALVLFGVAFLGLSLVFGGAAIL IEILTGRMDPHDEASLTTMTPIVLLATNLSLAALIPVSMLLQRWLFGVRMGAMSSIAG RFRWRWLGRVATVMAPVFLVYIGVTFALDPSGEVRFDGEVMLYLAIVLLTTPLQAAGE EYGFRGLIQRSVGSWFRSTSIALVVGAVVSSSLFALAHLAEDPWLIAYYFVFGLSATI SARLTGGLEAPVLIHALNNTLLFIPTVILGQMSQSFDRSAGTGGPFMLLPMAVVLGSA LLTGWWARRHRMESVAPRPLTAKEERRERERAWWAEERQRQASLAAWSAPTGSAAPPA" sig_peptide complement(1512650..1512730) /locus_tag="CMS_1441" /old_locus_tag="CMS1441" /note="Signal peptide predicted for CMS1441 by SignalP 2.0 HMM (Signal peptide probability 0.756) with cleavage site probability 0.415 between residues 27 and 28" misc_feature 1512653..1512766 /locus_tag="CMS_1440" /old_locus_tag="CMS1440" /note="submitted with no further information" misc_feature complement(order(1512806..1512874,1512902..1512970, 1512989..1513045,1513058..1513117,1513178..1513237, 1513265..1513333,1513400..1513468,1513526..1513594, 1513925..1513993)) /locus_tag="CMS_1441" /old_locus_tag="CMS1441" /note="9 probable transmembrane helices predicted for CMS1441 by TMHMM2.0 at aa 4-26, 137-159, 179-201, 224-246,256-275, 296-315, 320-338, 345-367 and 377-399" misc_feature complement(1512923..1513216) /locus_tag="CMS_1441" /old_locus_tag="CMS1441" /inference="protein motif:HMMPfam:PF02517" /note="HMMPfam hit to PF02517, Abortive infection protein,score 1.8e-16" gene 1514149..1515147 /locus_tag="CMS_1442" /old_locus_tag="CMS1442" /db_xref="GeneID:6157270" CDS 1514149..1515147 /locus_tag="CMS_1442" /old_locus_tag="CMS1442" /codon_start=1 /transl_table=11 /product="putative reductase" /protein_id="YP_001710169.1" /db_xref="GI:170781837" /db_xref="GeneID:6157270" /translation="MSDAGVVAAPRDVLVLGGTAWIGRLIAERLAARGDRVTCLARGA GGSAPDLTRFVAADRDLPDAYAAVAGADWDEVVDLTSSAEHARQAVAALAARARHWTL VSTVSVYASHEDPGADETAALVDPVDLEEYGQAKVAAERAVTAALAGRRMIVRPGLIT GPGDDSDRFGYWPARFALAGDGPVLVPDATGRRSQVIDARDLADLVVDVGVRALDGVV DAVGESVPLADVLDLAAEAAGSTGERVAATDAQLATADVRHWAGPRSLPLWLPSEAAG MLARSDAGIRALGVARRPLAETMRDVLADERERGIDRARASGLTRAEELQVLATLG" gene complement(1515219..1515899) /gene="hps" /locus_tag="CMS_1443" /old_locus_tag="CMS1443" /db_xref="GeneID:6157271" CDS complement(1515219..1515899) /gene="hps" /locus_tag="CMS_1443" /old_locus_tag="CMS1443" /EC_number="4.1.2.-" /codon_start=1 /transl_table=11 /product="hexulose-6-phosphate synthase" /protein_id="YP_001710170.1" /db_xref="GI:170781838" /db_xref="GeneID:6157271" /translation="MTDGHPIPTTTHHDRKRNHMKLQVAMDVLTTADALELAGKAAPH VDIIELGTPLIKAEGLSAITAIKEAHPDKIVFADLKTMDAGELEADIAFSAGADLVTV LGVAGDSTIAGAVKAAKKHGKGIVVDLIGVPDKAKRAKEVTELGAEFVEMHAGLDEQA EDGYTFGNLLEDGKASGVAFSVAGGVKASTIADVQAAGAVVAVAGGAIYSADDPAAAA AELRAAIR" misc_feature complement(1515237..1515842) /gene="hps" /locus_tag="CMS_1443" /old_locus_tag="CMS1443" /inference="protein motif:HMMPfam:PF00215" /note="HMMPfam hit to PF00215, Orotidine 5'-phosphate decarboxylase, score 9.3e-51" gene complement(1515896..1516507) /gene="rmpB" /locus_tag="CMS_1444" /old_locus_tag="CMS1444" /db_xref="GeneID:6158758" CDS complement(1515896..1516507) /gene="rmpB" /locus_tag="CMS_1444" /old_locus_tag="CMS1444" /codon_start=1 /transl_table=11 /product="6-phospho-3-hexuloisomerase" /protein_id="YP_001710171.1" /db_xref="GI:170781839" /db_xref="GeneID:6158758" /translation="MTNSTPDPRPTGDAPVDVATALTLIADENARVARALAEPDLAAR LDEAARVIRDGRRVFALGAGRSGLALRMTAMRFMHLGLDAHVVGEATSPAIAEGDVLL VASGSGTTAGIVAAAQTAHDVGARIVALTTADDSPLADLADVTVLIPAAAKQDHGGTV SAQYAGGLFELSVALVGDAVFHALWQASGLSADELWPRHANLE" misc_feature complement(1515974..1516363) /gene="rmpB" /locus_tag="CMS_1444" /old_locus_tag="CMS1444" /inference="protein motif:HMMPfam:PF01380" /note="HMMPfam hit to PF01380, Sugar isomerase (SIS),score 1.4e-10" gene 1516555..1517937 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /db_xref="GeneID:6158938" CDS 1516555..1517937 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /codon_start=1 /transl_table=11 /product="LuxR family transcriptional regulator" /protein_id="YP_001710172.1" /db_xref="GI:170781840" /db_xref="GeneID:6158938" /translation="MDPPTRSSRSPSRGWRFGWAYGGVMPSRTHPADPAAHSAADAVA LLDGLHDALAAPLQEVADALSGLMQPVVAHRALVIFTEDCTGRPRKKAGEAEVVENVT IAELDRILASLADASGDTADAGSAWAVQRPVGGRPRTIAAWRADTGALLVLVDPVAAH DDVPAARELVRALWRSVAHGIRQQVAAAPPAYLAEARAVSSERARIVSELGDAHATTL ESLLAVLRSSRTGDAAARQTAADLATNAMVELRAASDRDRSLGEEPVARAFARLRDDL RPLVRFRDLDVQFVEPPVEGRALPGEVAHAGRAIVRGAVLALVEQPDVTRVRIQWDCD GSNLLVGIRDDGAGATTADLDALRRLTDRVAALDGELDVTATPGWGSEIAVRLPLDAP AAGLDAAGEAGLSAREREVLALVAGGSRNRAIATSLGISENTVKFHVANLLRKMGAST RAELAGLVRG" misc_feature 1517479..1517724 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 0.00079" misc_feature 1517755..1517928 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 9.4e-21" misc_feature 1517806..1517889 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature 1517809..1517874 /locus_tag="CMS_1445" /old_locus_tag="CMS1445" /note="Predicted helix-turn-helix motif with score 1118.000, SD 2.99 at aa 419-440, sequence SRNRAIATSLGISENTVKFHVA" gene 1518103..1520190 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /db_xref="GeneID:6157272" CDS 1518103..1520190 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /note="Possible degradation of extracellular 5'-nucleotides for nutritional needs. May be sortase-sorted." /codon_start=1 /transl_table=11 /product="putative secreted 5'-nucleotidase" /protein_id="YP_001710173.1" /db_xref="GI:170781841" /db_xref="GeneID:6157272" /translation="MAGLSATAVFGLGAAPASADEVPVAIDVYSINDFHGRLETTSST AGAAVISGAFQQAKAENPNSTLISAGDNIGASTFTSLSQADQPTLDALNAMGVSVSTL GNHEFDQGRDDVDGRVVPASDFPYISANLYENGTKEHAYAAYDVQDIDGVRVAFVGAT TESLPELVSPAGLATLDVGSVVDASTATARALRDGDDANGEADVVVLVVHEGASTSDE SSLTDDSVFGRIVTGVQADVDAVISGHTHLGYDYELSVAGKALPLPVLQTGSYGTNLG HLSLTVDPATKALTSISSELVPLLTTDGKPAFPADPAVQRIVDDAVAKAEVIGSRTVG EITGDITRARQADGSENRGGESTIGNLVADAQLWATQADLGTEIAFMNPGGVRQDLVV ASSGAGDAEGEVTYKEAAIVQPFANTLTTARITGAGVKAVLEQQWQPEGSSRPFLKLG LSRDLTYTYDPTAARGERITGVFFQGAPVDPARVFTMVANSFLAEGGDNFTELANTTE QSDSGRVDLTAFVDHITEFSPVEPDSATRSIGIVDTTDAAPRAGQERSYELSSLLVSN APVQDTEVVTLIDGEEVARTPIDAAVVDTTDEQGRASVRFTVPADLAAGSHQLAFLLP STGASVLYALDTASGSVVPSGTGTVPAPSTEPTLAATGSEAGPVLGTSLAALALGLAL VAFRRRASAVARR" sig_peptide 1518103..1518159 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /note="Signal peptide predicted for CMS1446 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.986 between residues 19 and 20" misc_feature 1518178..1518849 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 8.7e-12" misc_feature 1519096..1519617 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /inference="protein motif:HMMPfam:PF02872" /note="HMMPfam hit to PF02872, 5'-Nucleotidase,C-terminal, score 1.4e-36" misc_feature 1519969..1519986 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature 1520074..1520088 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /note="LXXTG" misc_feature 1520104..1520157 /locus_tag="CMS_1446" /old_locus_tag="CMS1446" /note="1 probable transmembrane helix predicted for CMS1446 by TMHMM2.0 at aa 668-685" gene 1520219..1521730 /locus_tag="CMS_1447" /old_locus_tag="CMS1447" /db_xref="GeneID:6157273" CDS 1520219..1521730 /locus_tag="CMS_1447" /old_locus_tag="CMS1447" /codon_start=1 /transl_table=11 /product="putative amidase" /protein_id="YP_001710174.1" /db_xref="GI:170781842" /db_xref="GeneID:6157273" /translation="MPGRPVPAPTVRPVPAGRPAPTPAYAGAVFELHHLSAHHLWDQL QRGEVTPTELVTHYLERIERLDPQLGAFTTVTADRALERARHVEREVPRTAPLWGLPF GDKDLSERAGVRTTFGSRLFRDHVSDRTDAIPQALDDAGGISLGKTSAPEFGLPSYTE SLVAPPARTPWDTTRGAGGSSGGAAVAVAAGLLPFAPGSDGGGSVRIPAAATGLVGLK PSRGLVPAGSGQESLAGLVVPGPLARSVADAAMLLDAMIGRVNGRIPHPFTLRAPEDP DGDLLGAAVRGEGRFQIGVMTTTPWDDAYEIVRDASADDALAIAVRELATIGHGLEDL ALRPDPTYAPAFRTIWQAGAAGIPAEGDQLDLLEPLTRWLVERGRALSARDLARALAQ LAAYERSVIAQFAHVDAVLTPALALEPRPVGWYDAEDGERNFAQQVQYTPYTSFANVT GLPAITLPVHLTDDALPMGVQLIGRPGGESTLLAIGRQLERRLRWERRHPPQW" misc_feature 1520375..1521667 /locus_tag="CMS_1447" /old_locus_tag="CMS1447" /inference="protein motif:HMMPfam:PF01425" /note="HMMPfam hit to PF01425, Amidase, score 1.4e-87" misc_feature 1520639..1520662 /locus_tag="CMS_1447" /old_locus_tag="CMS1447" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1520750..1520845 /locus_tag="CMS_1447" /old_locus_tag="CMS1447" /note="PS00571 Amidases signature." gene complement(1521756..1522469) /locus_tag="CMS_1448" /old_locus_tag="CMS1448" /db_xref="GeneID:6157274" CDS complement(1521756..1522469) /locus_tag="CMS_1448" /old_locus_tag="CMS1448" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710175.1" /db_xref="GI:170781843" /db_xref="GeneID:6157274" /translation="MFVGAVAQRVTGLGFALVVAPVLVILLGPFDGVMIVNLCSVLSA SLILAGVRRDVEWRRYLLLAGPAVVGIVPGALLAYLLPEPALEIGIGLLLVAALTTSL ALRRTTRVVDGPGVMAGFGFAAGVMNAAAGIGGPSVSVYAVVSRWEQRPFAATLQPFF LTTGAASLITKLVLAPDRWPDLGTAAWVGIVVTLVAGVGAGTLLAPRIPTRGARAAVV VLAFAGAVTAIVKGVGGLG" misc_feature complement(order(1521762..1521830,1521858..1521926, 1521945..1522013,1522056..1522124,1522158..1522217, 1522227..1522295,1522314..1522373,1522383..1522436)) /locus_tag="CMS_1448" /old_locus_tag="CMS1448" /note="8 probable transmembrane helices predicted for CMS1448 by TMHMM2.0 at aa 12-29, 33-52, 59-81, 85-104,116-138, 153-175, 182-204 and 214-236" misc_feature complement(1521783..1522469) /locus_tag="CMS_1448" /old_locus_tag="CMS1448" /inference="protein motif:HMMPfam:PF01925" /note="HMMPfam hit to PF01925, Protein of unknown function DUF81, score 2.1e-05" gene 1522625..1523566 /locus_tag="CMS_1449" /old_locus_tag="CMS1449" /db_xref="GeneID:6157275" CDS 1522625..1523566 /locus_tag="CMS_1449" /old_locus_tag="CMS1449" /codon_start=1 /transl_table=11 /product="putative siderophore-interacting protein" /protein_id="YP_001710176.1" /db_xref="GI:170781844" /db_xref="GeneID:6157275" /translation="MVDAQPAVERPAYRPFAARVARTERLSPTFLRITFQSDDLRDFG DECLDQRIKLLLPVAEHGLPDLTGVGGDDWFAWWRALPDAERNPLRTYTSRAVRRELG EVDVDFALHGDMGPASRWAGGAQPGDEMVVIGPDALSPARGLGIEWHPGAARSLLLAG DETAAPAICNILSSLPDDAVGCAFIEVPVTGDRLDVRVPKGVNLSWLPRDGRPNGSRL EEAVRRWVDCHVKVGAIAAPEVALADEAQPLAEDDADGIVWDAPVVHEGSTLYAWLAG ESGCIKALRRFLVRDTGIDRRQVAFMGYWRAGSAEGS" misc_feature 1522652..1523560 /locus_tag="CMS_1449" /old_locus_tag="CMS1449" /inference="protein motif:HMMPfam:PF04954" /note="HMMPfam hit to PF04954, Siderophore-interacting protein, score 2.6e-47" gene 1523569..1523973 /locus_tag="CMS_1450" /old_locus_tag="CMS1450" /db_xref="GeneID:6157276" CDS 1523569..1523973 /locus_tag="CMS_1450" /old_locus_tag="CMS1450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710177.1" /db_xref="GI:170781845" /db_xref="GeneID:6157276" /translation="MAGSTRTRAAKGTKRRVLFVTDETGLDQTQAALAALPLCTRGSV FVEVPDASVEVALAHPPRMVVTVIARDGRGVDGEPAAPMTAVARAVGAWASEMMVFAA PISDEHPVTEVSVLLGGHVGGHDDLLHLLATR" gene complement(1523997..1524875) /locus_tag="CMS_1451" /old_locus_tag="CMS1451" /db_xref="GeneID:6157277" CDS complement(1523997..1524875) /locus_tag="CMS_1451" /old_locus_tag="CMS1451" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710178.1" /db_xref="GI:170781846" /db_xref="GeneID:6157277" /translation="MTGPLDGRTVVITGASSGIGRIAARELHARGADVVVVGRDPERT RGIAAELGARHAIADMDRLDEVRALAATLLATCPRIHVLALNAGSLVPRRATTTDGHE TTFQRNVLAPFLLTRLLLPRLEETQDALGGDASPVRVIGTASRANLWGRVRLDDLDWR KRPWSGGWQAYGTSKAMMILMMRTLAERVGPRGIEACSFHPGLVRTSFGSDSTVMKAL LALSMGAYGISAEAGAVPLVQLVSVPDLAAPNGTYYDQLTPDGKTTAQAADPQLGRDL WAALELASGTDGPVRR" misc_feature complement(1524090..1524848) /locus_tag="CMS_1451" /old_locus_tag="CMS1451" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.4e-23" gene complement(1524872..1525264) /locus_tag="CMS_1452" /old_locus_tag="CMS1452" /db_xref="GeneID:6157278" CDS complement(1524872..1525264) /locus_tag="CMS_1452" /old_locus_tag="CMS1452" /note="possibly secreted" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710179.1" /db_xref="GI:170781847" /db_xref="GeneID:6157278" /translation="MIRAGLGAVAGAVRGVLLDSPVSRAGSGVATAVGLAIGLPLSTG EVRRHGDLIVLSGLPSWVFGRGGTCVGRVYLTRDNAGPAVLEHEAVHVVQWRRYGLLM PLLYWWAGRDPLRNRFEIEAGLEKGGYR" sig_peptide complement(1524872..1524943) /locus_tag="CMS_1452" /old_locus_tag="CMS1452" /note="Signal peptide predicted for CMS1452 by SignalP 2.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.901 between residues 24 and 25" gene complement(1525261..1526694) /locus_tag="CMS_1453" /old_locus_tag="CMS1453" /db_xref="GeneID:6157279" CDS complement(1525261..1526694) /locus_tag="CMS_1453" /old_locus_tag="CMS1453" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710180.1" /db_xref="GI:170781848" /db_xref="GeneID:6157279" /translation="MTSYDLIVIGAGPVGENVADRAKQGGLSVLVVESELVGGECSYW ACMPSKALLRSGSALRAARAVAGSREAVTGELDVAAVLERRNSFTSSWDDQGQVSWLE GIGIELARGHGRISGPRRVTVTAPDGSVAEHEAAHAVVVSTGTAALLPDIPGLAEAQP WTSREATSVEVVPTSIVVIGGGVVAAEMATAYASLGSAVTIVARSGLLGGQEPFAGEL VGDSLKGMGVDVRLGASPSRVARDGDEVTVELSDGSSVTAAEVLVATGRTPRTEDLGL DTVGLEAGAYLDVDDTMLVTGGVNAESPWLYAVGDVNHRALLTHQGKYQARAAGEVIA ARATGGTVDDSPWGVHVATADHRAVPQVTFTDPEVASVGLTAKAADDAGIRARVVDYD LGSVAGSSLHADGYAGQGRMVVDEDRGVIVGVTFVGPDVAELLHSATIAVVGEVPLAR LWHAVPSYPTISEVWLRLLETYGRPTA" misc_feature complement(1525288..1525620) /locus_tag="CMS_1453" /old_locus_tag="CMS1453" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 6.2e-24" misc_feature complement(1525732..1526682) /locus_tag="CMS_1453" /old_locus_tag="CMS1453" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.2e-40" gene complement(1526752..1527531) /locus_tag="CMS_1454" /old_locus_tag="CMS1454" /db_xref="GeneID:6157280" CDS complement(1526752..1527531) /locus_tag="CMS_1454" /old_locus_tag="CMS1454" /note="Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="YP_001710181.1" /db_xref="GI:170781849" /db_xref="GeneID:6157280" /translation="MRVERRGHLLLIGLDRPAKRNAADMRMLRELASAYGLLDRDPEL RVGVVHAIGDHFTGGLDLADVAPHIGRGPGGGLDTVPEDGVDPWRMAGDGVGKPVVLA VQGTCLTLGIELALASDVVVAASGTRFGQIEVARGILPFGGATLRFPAVAGWADAMRW ILTGDPFDAEEARRMRIVQLVVPDGEQLDAAIGIAERIAAQAPLAVQATLRNARAALR DGHEAAAAALPVELVRLASSEDAARGMRAAADRRPADFVGR" misc_feature complement(1526983..1527504) /locus_tag="CMS_1454" /old_locus_tag="CMS1454" /inference="protein motif:HMMPfam:PF00378" /note="HMMPfam hit to PF00378, Enoyl-CoA hydratase/isomerase, score 4.4e-19" gene complement(1527662..1528504) /locus_tag="CMS_1455" /old_locus_tag="CMS1455" /db_xref="GeneID:6157281" CDS complement(1527662..1528504) /locus_tag="CMS_1455" /old_locus_tag="CMS1455" /codon_start=1 /transl_table=11 /product="putative arginase" /protein_id="YP_001710182.1" /db_xref="GI:170781850" /db_xref="GeneID:6157281" /translation="MPASFVVVPQWQGSGSSRAMRLADGAEAIRGDLPASATHVVEVP VEAGESLGTGVLRYASLLAVRTRQEAALRAASAAGAGPLVTIGGDCGVEIASIGHAAA AHPGLAVVWLDAHADLNSPASSPTGAFHGMVLRAAIGEGVDGLELPAGAVTADRVVLA GVRALDDAESDLVDARGITLLGVDAVGPEALVAAVSATGATDVYVHVDLDVLDPGAMS GVGHPEPFGLDVPAVTESIKAMRRSFGLAGAGITEFAPSSPAAAVDDMGTILRIIGAL TGPV" misc_feature complement(1527683..1528504) /locus_tag="CMS_1455" /old_locus_tag="CMS1455" /inference="protein motif:HMMPfam:PF00491" /note="HMMPfam hit to PF00491,Arginase/agmatinase/formiminoglutamase, score 6.5e-09" misc_feature complement(1528154..1528180) /locus_tag="CMS_1455" /old_locus_tag="CMS1455" /note="PS00148 Arginase family signature 2." gene complement(1528595..1529164) /locus_tag="CMS_1456" /old_locus_tag="CMS1456" /db_xref="GeneID:6157282" CDS complement(1528595..1529164) /locus_tag="CMS_1456" /old_locus_tag="CMS1456" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710183.1" /db_xref="GI:170781851" /db_xref="GeneID:6157282" /translation="MIANSRGPETLTDLIDELGDRARAATVEEVAEAGEIVVVTIPLK NIDSVPVAPLAGKIVIDTDNYYPERDGNIAELDDETTTTAEMLQRHLPESKVVKAFNH IYAADLTEHGTPAGTPGRRALVIAGDDADAKATVTSILDSFGYDAVDAGPLAEGWRIQ RDTPGYGPALDADGLRTALTEAKRYRDME" misc_feature complement(1528661..1529158) /locus_tag="CMS_1456" /old_locus_tag="CMS1456" /inference="protein motif:HMMPfam:PF03807" /note="HMMPfam hit to PF03807, NADP oxidoreductase,coenzyme F420-dependent, score 7.1e-06" gene complement(1529340..1529993) /locus_tag="CMS_1457" /old_locus_tag="CMS1457" /db_xref="GeneID:6157283" CDS complement(1529340..1529993) /locus_tag="CMS_1457" /old_locus_tag="CMS1457" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710184.1" /db_xref="GI:170781852" /db_xref="GeneID:6157283" /translation="MLDQMVRDYTESIREAESAVAQTIGNLRMIEDDHREDVQAAQDW GRKALAASQKADEYRGAGNTPNADKFDALARVALQRQMQSESEAKGAEPTIASQTEVV EKLKQGLDTMRGKLQQLSSKRDELNARQKTVQAQSQVQDAMKSIDIMDPTSEVSRFEQ KIRREEARVRGAEELQASSLDAQFEELEDLGELTEVEARLAALKSGGSAPKQVTSGE" misc_feature complement(1529370..1529993) /locus_tag="CMS_1457" /old_locus_tag="CMS1457" /inference="protein motif:HMMPfam:PF04012" /note="HMMPfam hit to PF04012, PspA/IM30, score 4.2e-11" gene complement(1530192..1532243) /locus_tag="CMS_1458" /old_locus_tag="CMS1458" /db_xref="GeneID:6157284" CDS complement(1530192..1532243) /locus_tag="CMS_1458" /old_locus_tag="CMS1458" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710185.1" /db_xref="GI:170781853" /db_xref="GeneID:6157284" /translation="MPRSARLLGAALALGLAGALVPQMAQATEPVDFGGATILDQADA VTPAQEQQIQQAIDQLQQQTGVTLHVAYVDTFTGASDAKAWGQETKQANSFGSSDALL AVAVDGREYAFPTGQVSGDQESFETTVIVPQLRADDWSGAAVATAQGMESVARTGSVA DTRTTPSGGNDSGIDFGLVLLLVLGAILVAAVGTTLVGRRRKRKAIAATRQVALAEMR TAEQRAGSMLVQLDDALETSEQEVGFAEAEFGSGAVGPYREVLVSAGGKVREAFALKQ KLDDTIEDTDEERRTWAARIVDLCEEARAELDAQAESFEELRALEKNAPQTLAAIVTD AEALKTRIERTQEAVDLLGRRYAGPSMTTVTGNVDQARSLLSFATDTAQEAAEAIRAG DRASTGEIAVKVRAAQQAVGQAGKLLDGVDRVSSDLEHASTRVQEEIADVRSDIQDAR AAQRGGRMPELTRLVEAAEQAIADAKPLQGRLADPLTSVTLLQEAEARLDEALAPVRE QQEQVQRAIGYLPRALSTAESQVATARDFISTRRGGVGEEARTRLAHAQRALDDAHEA APRDPVRAVAASQAATAYSAQAIEAAQRDLDQGGGYGGYGGGGGLMGGGSGIGGAVVG GIIGGLLSGGGGGGGWGGGGGFGGGSFGGGGGGFGGGGGGGFGGGGGGGFGGGGGGGS F" sig_peptide complement(1530192..1530272) /locus_tag="CMS_1458" /old_locus_tag="CMS1458" /note="Signal peptide predicted for CMS1458 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.998 between residues 27 and 28" misc_feature complement(order(1530204..1530272,1530315..1530383, 1531650..1531718,1532166..1532225)) /locus_tag="CMS_1458" /old_locus_tag="CMS1458" /note="4 probable transmembrane helices predicted for CMS1458 by TMHMM2.0 at aa 7-26, 176-198, 621-643 and 658-680" misc_feature complement(1531773..1532117) /locus_tag="CMS_1458" /old_locus_tag="CMS1458" /inference="protein motif:HMMPfam:PF04536" /note="HMMPfam hit to PF04536, Protein of unknown function DUF477, score 1.2e-06" gene complement(1532332..1532742) /locus_tag="CMS_1459" /old_locus_tag="CMS1459" /db_xref="GeneID:6157285" CDS complement(1532332..1532742) /locus_tag="CMS_1459" /old_locus_tag="CMS1459" /note="N-terminal truncation relative to homologs may indicate pseudogene." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710186.1" /db_xref="GI:170781854" /db_xref="GeneID:6157285" /translation="MTLLAADGLGGSADDAVRAVAAAGPLPTLRLGGLVVFGVPPRGL VLARQVVVDAALLDLHARIHAAVDGSPGEADDEDVDVVPHTRPGSWTPHVSLAVRLTG EQLGAALGRIDPLDAPAAGLRRWDPHDRTVTELA" gene complement(1532871..1533113) /locus_tag="CMS_1460" /old_locus_tag="CMS1460" /db_xref="GeneID:6157286" CDS complement(1532871..1533113) /locus_tag="CMS_1460" /old_locus_tag="CMS1460" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710187.1" /db_xref="GI:170781855" /db_xref="GeneID:6157286" /translation="MKLSRIAAAATGFLRTSKGQDVGRTAIDRVSGIADKATGSKHAD KIQKARQAADDQLRKLGPDGGRGSQGPVPPATPPRR" gene 1533320..1533391 /locus_tag="CMS_r011" /old_locus_tag="CMSr011" /db_xref="GeneID:6157287" tRNA 1533320..1533391 /locus_tag="CMS_r011" /old_locus_tag="CMSr011" /product="tRNA-Arg" /db_xref="GeneID:6157287" misc_feature 1533453..1535298 /note="low GC region containing PASTA domain protein" gene complement(1533620..1533802) /locus_tag="CMS_1461" /old_locus_tag="CMS1461" /db_xref="GeneID:6159030" CDS complement(1533620..1533802) /locus_tag="CMS_1461" /old_locus_tag="CMS1461" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710188.1" /db_xref="GI:170781856" /db_xref="GeneID:6159030" /translation="MPEYRLEQLPATGTVKKNAYTEAFNEQVNAIAAEGWEVVTIHRN GSLLMPMDVLFCRAGC" misc_feature complement(1533761..1533778) /locus_tag="CMS_1461" /old_locus_tag="CMS1461" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." gene complement(1533836..1534537) /locus_tag="CMS_1462" /old_locus_tag="CMS1462" /db_xref="GeneID:6157288" CDS complement(1533836..1534537) /locus_tag="CMS_1462" /old_locus_tag="CMS1462" /note="Contains a PASTA domain which suggest an interaction with peptidoglycan" /codon_start=1 /transl_table=11 /product="putative peptidoglycan associated protein" /protein_id="YP_001710189.1" /db_xref="GI:170781857" /db_xref="GeneID:6157288" /translation="MPNADVGPEQGLGGWLRAPYARGDPGGPLTRTALTLPAAALLSA LLLTGCSAADPISVPDVSGMTGTEAKNTLENAGFEVDLEADEGFVLDPANWEVVSQLP DAGDDAADGDTITLSVSKPEAEPVAEPTPAATPTEEAAPIAPAAPAVPAEPEALTSGM AMTVCDRMGKEQAPYGWDADFILDGTRMQQDGGWFLKAGVDITNAYDAEGRFTVECFV TGTEDSPTIETFNVY" misc_feature complement(1534178..1534378) /locus_tag="CMS_1462" /old_locus_tag="CMS1462" /inference="protein motif:HMMPfam:PF03793" /note="HMMPfam hit to PF03793, PASTA, score 1.2e-09" gene complement(1534562..1535245) /locus_tag="CMS_1463" /old_locus_tag="CMS1463" /db_xref="GeneID:6157289" CDS complement(1534562..1535245) /locus_tag="CMS_1463" /old_locus_tag="CMS1463" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710190.1" /db_xref="GI:170781858" /db_xref="GeneID:6157289" /translation="MAQRRPVGAGACRCSVGAADVCERAGYVQAMTLHRTVASAFRAT HQTLAFAEQGAAQFLKRGTEAEFGLHTAVTNGRAVTFVLQNLTSNDLLGSPFLTWYDR EMTQMRADPIDRWFVELRNRIEKQGTMGARTGTFISNYSSSTVEPDRPIGATSRFLGD HMGRAGWKIALPDGSTTVVYTATPPYMRTVMTTLGAPDDFDVFKHLEPWLAKLRDLVE RAEAEWGMK" gene 1535711..1536403 /locus_tag="CMS_1464" /old_locus_tag="CMS1464" /db_xref="GeneID:6157290" CDS 1535711..1536403 /locus_tag="CMS_1464" /old_locus_tag="CMS1464" /codon_start=1 /transl_table=11 /product="putative oxidase" /protein_id="YP_001710191.1" /db_xref="GI:170781859" /db_xref="GeneID:6157290" /translation="MADDDYSTSVRDLLKGAKPKPHEFPELDPAHLPDDPIDLVIDWI RDAVAHDAAEPNAVVLATADADGRPSARTLLLKDVTPTVDDEPGALWFSSLADSPKGR DLEANPRAALVAYWRERGRQIRATGPVFHGDGEVSARDFLARHPASRAEVIAGDQSEP MPDAAERDARLARARDAVDRDPELVAESWRAYVLQPTVVEFWQATADHGQLRVMYRSG PDGSWTHTLVWP" misc_feature 1535840..1536115 /locus_tag="CMS_1464" /old_locus_tag="CMS1464" /inference="protein motif:HMMPfam:PF01243" /note="HMMPfam hit to PF01243, Pyridoxamine 5'-phosphate oxidase-related, score 3.1e-17" gene 1536481..1537251 /locus_tag="CMS_1465" /old_locus_tag="CMS1465" /db_xref="GeneID:6157291" CDS 1536481..1537251 /locus_tag="CMS_1465" /old_locus_tag="CMS1465" /codon_start=1 /transl_table=11 /product="putative aminopeptidase" /protein_id="YP_001710192.1" /db_xref="GI:170781860" /db_xref="GeneID:6157291" /translation="MPAPLRRLAVVQVTRSRPEAAAYNTLVQGLNARVAEIADAAGWQ VENVAAEDEGVESLLARTREADAVVIMGGEDVAPRFYGGPAEYEGRSTHREVADAGQI ALVRRAVAEGTPLLGICRGAQIVNVALGGTLQQHIEGVGEHRNDAEEITAVMRDHDVR VAVGSRLARALGSTDVVVRSAHHQAVDRPGAGLRVVAVAPDGVPEAVEHESAPVIGVQ WHPEDPGAARDQLPALLDALAEACALREPVGDARTAAA" misc_feature 1536505..1537146 /locus_tag="CMS_1465" /old_locus_tag="CMS1465" /inference="protein motif:HMMPfam:PF07722" /note="HMMPfam hit to PF07722, Peptidase C26, score 1.7e-44" misc_feature 1536625..1537194 /locus_tag="CMS_1465" /old_locus_tag="CMS1465" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 3.6e-05" gene complement(1537298..1538053) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /db_xref="GeneID:6157292" CDS complement(1537298..1538053) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /codon_start=1 /transl_table=11 /product="putative short-chain oxidoreductase" /protein_id="YP_001710193.1" /db_xref="GI:170781861" /db_xref="GeneID:6157292" /translation="MSAAVPRSDRLRGRTALVTGAASGIGAAIARHFVLAGAEVVLVD MAPAVHEEARRIGAVGAVVADVSDEARVADAVAEAGRMLGRIDVLVNSHGILTETPVA EMALATWQRTIDVDLTSVFLLTRAVLPGMLERRDGRIITVASQLGQKGGVGLAHYAAA KAGVIAFTKSLALEVSGSNVLANVIAPGPIATPLVDAISEDWKDAKRRELPLGRFGTV DEVAPTAVLLAADPDGNLFVGQTLGPNSGDVMP" sig_peptide complement(1537298..1537378) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /note="Signal peptide predicted for CMS1466 by SignalP 2.0 HMM (Signal peptide probability 0.841) with cleavage site probability 0.270 between residues 27 and 28" misc_feature complement(1537310..1538008) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.8e-72" misc_feature complement(1537538..1537624) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /note="PS00061 Short-chain dehydrogenases/reductases family signature." misc_feature complement(1537949..1538017) /locus_tag="CMS_1466" /old_locus_tag="CMS1466" /note="1 probable transmembrane helix predicted for CMS1466 by TMHMM2.0 at aa 13-35" gene complement(1538050..1538817) /locus_tag="CMS_1467" /old_locus_tag="CMS1467" /db_xref="GeneID:6157293" CDS complement(1538050..1538817) /locus_tag="CMS_1467" /old_locus_tag="CMS1467" /codon_start=1 /transl_table=11 /product="putative short-chain oxidoreductase" /protein_id="YP_001710194.1" /db_xref="GI:170781862" /db_xref="GeneID:6157293" /translation="MTGTAPVALVTGGASGIGRATAVRLAARGDRVVVGRYPGDPHDA GATLEAVRTVGGTGIAVDLDVASTRSVDAFVRAALEEFGQVDHVVAAAGILRRAPLGA MTDERWDEVLGVDLGGVMRVIRAAEPLLGRGSSIVAVSSMAGGVYGWGDHAHYATAKA GVVGLVRSAAVELAPRGIRANTVIPGLIETPQSLDAVNSLGADGLRRAGDRIPAGRVG RPEEVASVIAFLASDDAAYVTGQTLTVDGGLTIRMQE" misc_feature complement(1538071..1538796) /locus_tag="CMS_1467" /old_locus_tag="CMS1467" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 1.1e-63" gene complement(1538814..1540211) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /db_xref="GeneID:6157294" CDS complement(1538814..1540211) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /codon_start=1 /transl_table=11 /product="major facilitator family transporter" /protein_id="YP_001710195.1" /db_xref="GI:170781863" /db_xref="GeneID:6157294" /translation="MSTDTSRPGAAPAAAGSAASAASPADALPAGLEKVSVRQTRRVT GIAFLAWTIAVYDFILFGTLLPDISRDFGWDTSESLLVSTLVSVGTAVVVLLVGPMVD RLGRRVGMVVSVTGTALSSGATALSAGAVSLVGIRSISGLGLAEQSINATYLNEIYEQ TEDERIRRNKGFVYAMVQTGWPLGALLAAAFVGLITTAFGPGSWRIAFGLATVPALVV AAICLTLRESPQFVAQQRIRRLRAAGHHDEAAAFARATGLDVQRSAPIARIFQGKHLR STIVLSVAWLLNWFGIQTFSVLGTTVLESGKHIDASNALLLIIASNCVGVLGYLAHGW LGDRLGRRNVIVGGWLVAGLAFAVMLLGPDDPTFVMGAYMVGLFFLLGPYAAILFFQA GCFDSDCRATGSSFIGAMSQPGAIIGGFLLTGLTASAMSFGQAALWVGAGGILASALV MLLAKPTGETREATA" sig_peptide complement(1538814..1538894) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /note="Signal peptide predicted for CMS1468 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.579 between residues 27 and 28" misc_feature complement(1538820..1540085) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.3e-08" misc_feature complement(order(1538850..1538909,1538937..1539005, 1539042..1539110,1539126..1539185,1539204..1539272, 1539315..1539383,1539537..1539605,1539633..1539701, 1539921..1539974,1540017..1540085)) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /note="10 probable transmembrane helices predicted for CMS1468 by TMHMM2.0 at aa 43-65, 80-97, 171-193, 203-225,277-299, 314-336, 343-362, 368-390, 403-425 and 435-454" misc_feature complement(1538931..1540073) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature complement(1539873..1539923) /locus_tag="CMS_1468" /old_locus_tag="CMS1468" /note="PS00216 Sugar transport proteins signature 1." gene complement(1540246..1541136) /locus_tag="CMS_1469" /old_locus_tag="CMS1469" /db_xref="GeneID:6157295" CDS complement(1540246..1541136) /locus_tag="CMS_1469" /old_locus_tag="CMS1469" /codon_start=1 /transl_table=11 /product="putative deacetylase" /protein_id="YP_001710196.1" /db_xref="GI:170781864" /db_xref="GeneID:6157295" /translation="MAKDIIIAFGIDVDAVSGWLGSYGGQDSPGDISRGLFAGEVGVP RLNALLAKHDLPSTWFWPGHSIETFPREFDQVVAAGHEIGAHGYSHENPIEMSRQQEA DVLDRSIELIESRAGRRPTGYVAPWWEFSRVTNELLIERGIRYDHSLMHRDFEPYYVR VGDTWQGVDYTKDAASWMHPLVRGEETDLVEIPASWYLDDLPPMMFVKGSPNSHGFVN PRHLEEMWRDQFDWVYREQDYGVFTFTIHPDVSGRPQVLLMLERLIAHINSHEGVRWA TFDEIAQDFQRRSPRTPRVP" misc_feature complement(1540699..1541061) /locus_tag="CMS_1469" /old_locus_tag="CMS1469" /inference="protein motif:HMMPfam:PF01522" /note="HMMPfam hit to PF01522, Polysaccharide deacetylase,score 1.4e-22" gene complement(1541162..1542187) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /db_xref="GeneID:6157296" CDS complement(1541162..1542187) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /codon_start=1 /transl_table=11 /product="putative L-asparaginase" /protein_id="YP_001710197.1" /db_xref="GI:170781865" /db_xref="GeneID:6157296" /translation="MPHVLVLATGGTISSRTRADGSAVAADPAERLLGSVPALPPGVT VATRDVLRVNSFALTHGDLRTIADAVTEALARDDVDGVVITHGTDTLEETAFLLDLVT RDPRPVVLTGAQRSADDPAGDGPGNLRDAIVVAASSEARGAGVLAVFASRILAADGLV KARTLDPDAFAARDGVPLGRVVGDDVRMTARPRALPVLHAPTPRFDRIRVDCVSVHPG ADAVLFRAAIAAGAAGVVVIGTGAGNANRSLVPAIEAAVDAGVLVALGTRVAEGPVAA IYGEGGGADAVRAGAVPIGRLSVAQARILVALLLDHHPADEARRLLAAAADPETRTTT PAGALPA" sig_peptide complement(1541162..1541236) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /note="Signal peptide predicted for CMS1470 by SignalP 2.0 HMM (Signal peptide probability 0.784) with cleavage site probability 0.383 between residues 25 and 26" misc_feature complement(1541231..1542166) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /inference="protein motif:HMMPfam:PF00710" /note="HMMPfam hit to PF00710, Asparaginase/glutaminase,score 3.2e-64" misc_feature complement(1541915..1541947) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /note="PS00917 Asparaginase / glutaminase active site signature 2." misc_feature complement(1542146..1542172) /locus_tag="CMS_1470" /old_locus_tag="CMS1470" /note="PS00144 Asparaginase / glutaminase active site signature 1." gene 1542359..1543387 /locus_tag="CMS_1471" /old_locus_tag="CMS1471" /db_xref="GeneID:6157297" CDS 1542359..1543387 /locus_tag="CMS_1471" /old_locus_tag="CMS1471" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001710198.1" /db_xref="GI:170781866" /db_xref="GeneID:6157297" /translation="MTQKRRPPTTQRMIAELAGVSITTVSRVLNSREEHPGRWAGPET VAAIRDIAERSGYRRNPHAASLRTSRSDLVGVLVPRLQDYVLATVYEGIDEAATERAI STFVTNSLDRPDLQRSRTRSMLDRRVDGMIFGDAHLDDPLLDELAEEGVPFVLVSRRR GDHVAVTCDDVAGGRLAAEHLIARGRTRPAVLAGMSFASTAVDRTRGFLDAYAEAGMP VPAERVIQRGFDAAAGREATEEVLRAGHAPDALFATNDFAAIGAMGALRDAGLSVPDD VALVGYNDTPLAASGSIGLTSVRSPVHEMGRLALETLLALVDGRDAASRLLEPTLVAR ASTGPHPG" misc_feature 1542383..1542460 /locus_tag="CMS_1471" /old_locus_tag="CMS1471" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 1.3e-06" misc_feature 1542383..1542448 /locus_tag="CMS_1471" /old_locus_tag="CMS1471" /note="Predicted helix-turn-helix motif with score 2078.000, SD 6.26 at aa 9-30, sequence TTQRMIAELAGVSITTVSRVLN" misc_feature 1542569..1543378 /locus_tag="CMS_1471" /old_locus_tag="CMS1471" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 8e-23" gene 1543450..1544244 /locus_tag="CMS_1472" /old_locus_tag="CMS1472" /db_xref="GeneID:6157298" CDS 1543450..1544244 /locus_tag="CMS_1472" /old_locus_tag="CMS1472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710199.1" /db_xref="GI:170781867" /db_xref="GeneID:6157298" /translation="MRRDVSSMLELQVSGESEMAFAVAVARGAEIASEHLSFALGGRP IEATEVVDRHDTRLHVLTTGAGVLTMEYRATVTGRRDPAPVDDVDLWIYRRPSRYCES DTLFPTARGEFRGLDGLPLLAAVREFVAESLRYAPGSSLPTDGAVRTLLARRGVCRDY AHLVIAMLRALDVPARLAAVYAPGLSPMDFHAVAEAWVDGAWHVVDATGLAPRQSLLR ISTGRHASDTAFLTNTRSLVTISRIEVMATVDELPVDDVAAPVRLG" misc_feature 1543903..1544073 /locus_tag="CMS_1472" /old_locus_tag="CMS1472" /inference="protein motif:HMMPfam:PF01841" /note="HMMPfam hit to PF01841, Transglutaminase-like,score 3.1e-12" gene complement(1544254..1544898) /locus_tag="CMS_1473" /old_locus_tag="CMS1473" /db_xref="GeneID:6157299" CDS complement(1544254..1544898) /locus_tag="CMS_1473" /old_locus_tag="CMS1473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710200.1" /db_xref="GI:170781868" /db_xref="GeneID:6157299" /translation="MPARLPAPTRPRIARSLPATAAAGIAVAMLLAGCSNPAPLQPAT PAPSASAGGGQAQGGGSGTGPSASPTPAPPKGTPVTTTCDQLLPDLAKFGPGFASEAL PADTSTDGLRADVLTMQGIACAFRSSDGTAVEIDVAQPVAAELQSRRDAAILLADPIA GYPSGVEAYFELQDAIGVATIYSSKHMVVMRSASFYEPGDHADLGNAVLKTVGG" sig_peptide complement(1544254..1544421) /locus_tag="CMS_1473" /old_locus_tag="CMS1473" /note="Signal peptide predicted for CMS1473 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.371 between residues 56 and 57" gene 1545094..1546758 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /db_xref="GeneID:6157300" CDS 1545094..1546758 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /EC_number="6.1.1.19" /note="catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="YP_001710201.1" /db_xref="GI:170781869" /db_xref="GeneID:6157300" /translation="MTTPDLTGALFEIVARTAGRRPGGDAIALSPDMVVLERPRNRDH GDWATNIAMRIAKPLGESPRTIAADIAKALGELPQVAKVDVAGPGFINITLEAAAAGA LAHTIVESGPAYGRGHSLEGIRINLEFVSANPTGPIHLGGVRWAAVGDSLARILQAEG ADVTREYYFNDHGSQIDRFARSLLASHLGEETPEDGYGGAYIGEIAERVVEGYEGDID ALTREAQQEVFRKSGTELMFGEIKQKLHDFGVDFDVFFHEDSLHESGAVDRAIARLTE LGHVFEEDGAIWLRTTTFGDDRDRVVIRSTGEPAYISGDLGYYLDKRERGFEQNIIML GADHHGYVGRMMAMVEAFGDTPGVNLQILIGQMVNLLRDGEPVRMSKRAGTIVTLDDL VDAVGVDAGRYALVRSSADQNLDIDLAVLGKRTNDNPVFYVQYAHARTCAVDRNAAAS GVDRSAFAPELLTHPTESALLGLLQEFPRIVAQAAELREPHRVARYVEELAGSYHRWY DSCRVVPRGDEEVTDLHRTRLWLNDAVRQVVANGLNLVGVSAPERM" misc_feature 1545115..1545378 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /inference="protein motif:HMMPfam:PF03485" /note="HMMPfam hit to PF03485, Arginyl tRNA synthetase,N-terminal, score 1.7e-21" misc_feature 1545400..1546347 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /inference="protein motif:HMMPfam:PF00750" /note="HMMPfam hit to PF00750, Arginyl-tRNA synthetase,class Ic, score 4.1e-124" misc_feature 1545493..1545522 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." misc_feature 1546390..1546755 /gene="argS" /locus_tag="CMS_1474" /old_locus_tag="CMS1474" /inference="protein motif:HMMPfam:PF05746" /note="HMMPfam hit to PF05746, Arginyl tRNA synthetase anticodon binding, score 2.8e-43" gene 1546770..1547600 /locus_tag="CMS_1475" /old_locus_tag="CMS1475" /db_xref="GeneID:6158608" CDS 1546770..1547600 /locus_tag="CMS_1475" /old_locus_tag="CMS1475" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710202.1" /db_xref="GI:170781870" /db_xref="GeneID:6158608" /translation="MSGRFQGTEVFEAPERRDPREARRRRRGPRGGTVFIWLLVLAVI GVGLAFGLRIIDQTVRGVAQDQAEKQIADQLPGQITGRVDVSIEGDWVIPQLIRGTLD RVVLDGPNLQADGTPFQAHIVATDVPTDQERTVGDVVATVSMDQAPASALLAKTAGTP LDLRFGDGTLGYSGSTRVLGLTLGYTVEATPELRDGSTIVITPAQVELQAGSLKVDLA QTIQGIRDITYPVCVAQYLPAGVQVQDVTVADGRTSMTVQSSSVKLTRDSLGVTGSCG" misc_feature 1546866..1546934 /locus_tag="CMS_1475" /old_locus_tag="CMS1475" /note="1 probable transmembrane helix predicted for CMS1475 by TMHMM2.0 at aa 33-55" gene 1547759..1549258 /gene="lysA" /locus_tag="CMS_1476" /old_locus_tag="CMS1476" /db_xref="GeneID:6157301" CDS 1547759..1549258 /gene="lysA" /locus_tag="CMS_1476" /old_locus_tag="CMS1476" /EC_number="4.1.1.20" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="YP_001710203.1" /db_xref="GI:170781871" /db_xref="GeneID:6157301" /translation="MTANPLAPSWLRPPDDANALDPAVWSRGTARGDDGAIRIAGVPA TELAARFGTPLYVMDEDDVRSRAAETLAAFAREAAAVGTSARVYYAGKAFLSIEVARW MVEEGLHIDVCSGGELAVALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQIVVDSRV EVERIAAAAAAHGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLQDAPGVVARIR SHASLSFTGLHAHIGSQIFETDAFVESARRLLDLHERLLADGPVPELNLGGGFGIAYT SVDRPVPVPEIARRLARIVGDECGRRGIPAPVIAVEPGRSIVGPSTATLYAVGTVKDV LVTVGGVDGEVAEASSATGDVEDARVAEEAETAVRRYVSVDGGMSDNARPALYGADYS VRIAGRASDADPALVRIAGKHCESGDLVVLADYLPGDVRPHDLLAVPATGAYCWALAS NYNWIGRPPVVAVRDGEARVIVRGETEADLLARDLGTPAAASPDVNGAR" misc_feature 1547951..1548718 /gene="lysA" /locus_tag="CMS_1476" /old_locus_tag="CMS1476" /inference="protein motif:HMMPfam:PF02784" /note="HMMPfam hit to PF02784, Orn/DAP/Arg decarboxylase 2, score 7.3e-68" misc_feature 1548023..1548079 /gene="lysA" /locus_tag="CMS_1476" /old_locus_tag="CMS1476" /note="PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site." misc_feature 1548725..1549150 /gene="lysA" /locus_tag="CMS_1476" /old_locus_tag="CMS1476" /inference="protein motif:HMMPfam:PF00278" /note="HMMPfam hit to PF00278, Orn/DAP/Arg decarboxylase 2, score 3.6e-31" gene 1549255..1550586 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /db_xref="GeneID:6158799" CDS 1549255..1550586 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /EC_number="1.1.1.3" /note="catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /protein_id="YP_001710204.1" /db_xref="GI:170781872" /db_xref="GeneID:6158799" /translation="MIEYRNLRVALLGCGSVGTQVARLMREHGDELAQRVGARLELVG IAVRDADAPRDPSVPRELLTTDAESLILGADIVIELMGGIEPARAHILAAISSGADVV TANKALLATHGPELFEAAEQVGAQLYYEAAVAGAIPIIRPLRDSLAGDRVERILGIVN GTTNYILDEMDTHGLGFDEALATATELGYAEADPTADIEGYDAAQKAAILASLAFHTR VPVEAVHREGITGLSSAQFDSARKAGYVIKLLAICERLTDPATGRDGVSARVYPALVP RDHPLAAVHGANNAVFVEAEAAGDLMFYGAGAGGVQTASAVLGDVVSTARRHVVGGPG VAESTHADLETLPVGAITTQYQITLQVADEPGVLARIAQLFSEHGVSVETLEQTTHQA PVAGGAGARPTASLVIGTHRATDAALRATVDAVSNLDAVTAVASVLRVEGA" misc_feature 1549270..1549662 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /inference="protein motif:HMMPfam:PF03447" /note="HMMPfam hit to PF03447, Homoserine dehydrogenase,NAD-binding, score 4.8e-41" misc_feature 1549666..1550220 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /inference="protein motif:HMMPfam:PF00742" /note="HMMPfam hit to PF00742, Homoserine dehydrogenase,score 9.2e-87" misc_feature 1549804..1549872 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /note="PS01042 Homoserine dehydrogenase signature." misc_feature 1550317..1550565 /locus_tag="CMS_1477" /old_locus_tag="CMS1477" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 5e-08" gene 1550586..1551662 /gene="thrC" /locus_tag="CMS_1478" /old_locus_tag="CMS1478" /db_xref="GeneID:6157302" CDS 1550586..1551662 /gene="thrC" /locus_tag="CMS_1478" /old_locus_tag="CMS1478" /EC_number="4.2.3.1" /note="catalyzes the formation of L-threonine from O-phospho-L-homoserine" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="YP_001710205.1" /db_xref="GI:170781873" /db_xref="GeneID:6157302" /translation="MAHQWRGLLREYADRLDVTDATPIITLGEGGTPLIPAPALSART GAKVWVKYEGMNPTGSFKDRGMTMAISKAVEHGAKAVICASTGNTSASAAAYATHAGI TAAVLVPEGKIAMGKLSQAVAHDAQLLQVRGNFDDCLDIARELSANYPVHLVNSVNND RIEGQKTGAFEVVEVLGDAPDFHLIPVGNAGNYTAYTRGYREDLEAGNATKLPRMFGF QAAGSAPIVDGAIVKDPDTIASAIRIGNPASWKLALEAQLLTDGYFGAVSDAKILEAH RILSAEVGIFVEPASAISVAGLLERAEAGQIPKGATVVLTVTGHGLKDPQWALRTADG SDVAPTSVGTDVAEIAGVLDLVAS" misc_feature 1550658..1551545 /gene="thrC" /locus_tag="CMS_1478" /old_locus_tag="CMS1478" /inference="protein motif:HMMPfam:PF00291" /note="HMMPfam hit to PF00291,Pyridoxal-5'-phosphate-dependent enzyme, beta subunit,score 7.5e-81" misc_feature 1550742..1550783 /gene="thrC" /locus_tag="CMS_1478" /old_locus_tag="CMS1478" /note="PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site." gene 1551659..1552624 /gene="thrB" /locus_tag="CMS_1479" /old_locus_tag="CMS1479" /db_xref="GeneID:6159016" CDS 1551659..1552624 /gene="thrB" /locus_tag="CMS_1479" /old_locus_tag="CMS1479" /EC_number="2.7.1.39" /note="catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="YP_001710206.1" /db_xref="GI:170781874" /db_xref="GeneID:6159016" /translation="MTDGPMPSALATGRRVHVRVPATSANLGPGFDTLGLALALYDDL TVTVRDAPGATVDVRGVGAGEVPTDETNLVVTAIAHTFAAFDQPMPGLDLVAENRIPH GRGLGSSGAAIVSGIMAAQGLLAGTVEIDADVLLRLATEMEGHPDNVAPALFGGLTIA WVDGKGPQHKKLAVHRGVSPLVLVPVATMSTALARSLQPESVPHEDAIFNVSRSALLI AALIQSPELLLAATEDRLHQDYRAAAMPETNELVHLLRERGYAAVVSGAGPSLLVLGS DPGQRLTAAELVAGNSATPWTALMLAVDVKGATVQVVDGGSAPAA" misc_feature 1551929..1552495 /gene="thrB" /locus_tag="CMS_1479" /old_locus_tag="CMS1479" /inference="protein motif:HMMPfam:PF00288" /note="HMMPfam hit to PF00288, GHMP kinase, score 9.2e-28" misc_feature 1551956..1551991 /gene="thrB" /locus_tag="CMS_1479" /old_locus_tag="CMS1479" /note="PS00627 GHMP kinases putative ATP-binding domain." gene complement(1552635..1553597) /locus_tag="CMS_1480" /old_locus_tag="CMS1480" /db_xref="GeneID:6159015" CDS complement(1552635..1553597) /locus_tag="CMS_1480" /old_locus_tag="CMS1480" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710207.1" /db_xref="GI:170781875" /db_xref="GeneID:6159015" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1552647..1553189) /locus_tag="CMS_1480" /old_locus_tag="CMS1480" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 1553994..1556543 /gene="rho" /locus_tag="CMS_1481" /old_locus_tag="CMS1481" /db_xref="GeneID:6157303" CDS 1553994..1556543 /gene="rho" /locus_tag="CMS_1481" /old_locus_tag="CMS1481" /note="An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes" /codon_start=1 /transl_table=11 /product="transcription termination factor Rho" /protein_id="YP_001710208.1" /db_xref="GI:170781876" /db_xref="GeneID:6157303" /translation="MTDVDTRATTADLNALRATTADLNALRVSQLQAIASELGIPGGS KLRKGELVTAISEIQAARGITAPAAETAPEATAPAEAGDAAPAAVEPSEPSAPVEEAP ASEPVVADADAAPAAAAAPAADTTPADTTPAEAPAADAPAEQPARAGRGSRRASTARI VPERIAETIEAPAAEPAGTGLEARIAEATSGSAPAATQAPRTEAPARSGRGSRRATSS GVVDPAAEAPRQAAQHVNSGQTADQLVPADAQANPQAPAADASAAADAPAEEQAPAQR SGRGRRRGGRDAQDGADRGAAQDAPATPDADETPAASEPADRQRDDRQRDDRDADDQG GRRDDQGREGREGGRNRSRNRRNRDRGRDQDDQQQNGRDQAPREQAPREPDADDEAQE EARTGRQRQNSRGQGDRQQDVRADQARADLGRDDDRGGRSRYRDRKRGRGQGGDDFEP EVTEDDVLLPVAGILDVLDNYAFVRTSGYLPGTNDVYVSLGQVKKHSLRKGDAIVGAI RQPRDNDSQSRQKYNAIVKIDSVNGLPPEEAANRVEFGKLTPLYPQDRLSLETEPAKL TTRIIDLVSPIGKGQRGLIVSPPKAGKTLVLQAIANAIATNNPEVHLMVVLVDERPEE VTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRA YNLAAPASGRILSGGVDSSALYPPKRFFGAARNIEHGGSLTILATALVETGSKMDEVI FEEFKGTGNMELRLSRALADKRIFPAVDVNASGTRREEMLMGADEVKVTWKLRRALAG LEQQQALEIVLSRLKETTSNVEFLMKVQASMPNTGNGVSHQSHGHGAHEKG" misc_feature 1554057..1554185 /gene="rho" /locus_tag="CMS_1481" /old_locus_tag="CMS1481" /inference="protein motif:HMMPfam:PF07498" /note="HMMPfam hit to PF07498, Rho termination factor,N-terminal, score 4.3e-09" misc_feature 1555368..1555607 /gene="rho" /locus_tag="CMS_1481" /old_locus_tag="CMS1481" /inference="protein motif:HMMPfam:PF07497" /note="HMMPfam hit to PF07497, Rho termination factor,RNA-binding, score 1.7e-20" misc_feature 1555689..1556315 /gene="rho" /locus_tag="CMS_1481" /old_locus_tag="CMS1481" /inference="protein motif:HMMPfam:PF00006" /note="HMMPfam hit to PF00006, H+-transporting two-sector ATPase, alpha/beta subunit, central region, score 1.2e-67" gene 1556549..1557628 /gene="prfA" /locus_tag="CMS_1482" /old_locus_tag="CMS1482" /db_xref="GeneID:6158930" CDS 1556549..1557628 /gene="prfA" /locus_tag="CMS_1482" /old_locus_tag="CMS1482" /note="recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="YP_001710209.1" /db_xref="GI:170781877" /db_xref="GeneID:6158930" /translation="MFESVVQLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRI VAAHAEWTQLGDDLAAARELAEEDPAFVDEIPGLEEQLDQAQEKLRRLLIPRDPDDAR DVIMEIKMGEGGAESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIK GTSDDPALGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDP NDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRAR VLAKQQEEIDAEASAVRRSQIRTMDRSERIRTYNFPENRIADHRTGYKAYNLDAVMDG ALDPVVESCIQADEEARLDALGTDA" misc_feature 1556735..1557079 /gene="prfA" /locus_tag="CMS_1482" /old_locus_tag="CMS1482" /inference="protein motif:HMMPfam:PF03462" /note="HMMPfam hit to PF03462, PCRF, score 1.2e-47" misc_feature 1557173..1557508 /gene="prfA" /locus_tag="CMS_1482" /old_locus_tag="CMS1482" /inference="protein motif:HMMPfam:PF00472" /note="HMMPfam hit to PF00472, Class I peptide chain release factor, score 6.8e-65" misc_feature 1557227..1557277 /gene="prfA" /locus_tag="CMS_1482" /old_locus_tag="CMS1482" /note="PS00745 Prokaryotic-type class I peptide chain release factors signature." gene 1557653..1558528 /locus_tag="CMS_1483" /old_locus_tag="CMS1483" /db_xref="GeneID:6158877" CDS 1557653..1558528 /locus_tag="CMS_1483" /old_locus_tag="CMS1483" /codon_start=1 /transl_table=11 /product="putative methylase" /protein_id="YP_001710210.1" /db_xref="GI:170781878" /db_xref="GeneID:6158877" /translation="MADEEGVPGTVDALRMRVGQVLAAAGIGDPAVDAELLVGHVLGL SRGQVQSRAITRAAVDARDAERVLELTARRARREPLQHITGVAHFRSLELLVGPGVFV PRPETEHVAQLAIDALSAAPGDAPVAVDLGTGSGALALALATEVPHARVHAIEVSPEA HAWTARNVERLAPRVDLRLGDLADAFPELDGTVSVVVSNPPYIPVDAVPRDPEVRLHD PALALYGGADGLDVVRLVSTTARRLLHPGGALVIEHGELQGQAIRALLDADGWRATAT HQDLTRRDRATTALR" misc_feature 1558238..1558258 /locus_tag="CMS_1483" /old_locus_tag="CMS1483" /note="PS00092 N-6 Adenine-specific DNA methylases signature." gene complement(1558568..1559221) /locus_tag="CMS_1484" /old_locus_tag="CMS1484" /db_xref="GeneID:6157304" CDS complement(1558568..1559221) /locus_tag="CMS_1484" /old_locus_tag="CMS1484" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710211.1" /db_xref="GI:170781879" /db_xref="GeneID:6157304" /translation="MTSAPRSPGPAGLLFVFDMDDVLYDHDWRGPADRITAATGHDLP ELRRRWYNDEGEWAAEAGRIDADSYLDAFCAAVGVEMDEEEWVRRRRASMTVRPSALE AVARAREAGRITLLTNNNALAARHLPELAPELVPLFGVEHLRTSSGYGARKPDPAVFR GVLAAYAQPAERTFFADDRLDNVESARGLGIHGHHVRGEGDLLPAVEAFVRAQAHAG" misc_feature complement(1558625..1559188) /locus_tag="CMS_1484" /old_locus_tag="CMS1484" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 7.8e-09" gene 1559293..1560255 /locus_tag="CMS_1485" /old_locus_tag="CMS1485" /db_xref="GeneID:6157305" CDS 1559293..1560255 /locus_tag="CMS_1485" /old_locus_tag="CMS1485" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710212.1" /db_xref="GI:170781880" /db_xref="GeneID:6157305" /translation="MSDDMARIYDCSVDTDLLPGMRLARQAVGRGEVVVIPTDTVYGI AADAFNPEAVQRLLDAKGRGRDAPPPVLIPGQSTLDALADFVPDVVRRMVDEFWPGGL TVILVAQPSLVWDLGETRGTVALRMPANSYALVLLAETGPLAVSSANKTGQPAAATAQ EAVDQLGESVDIFLDGGAAGGAASTIVDASRVTQAGGRVRIVREGAITRAQIQQLIGD ELEPVVTAPVEPEQAPVPDEPEAPRGTASGAEPVDGSADPDAVTPAAEAPAAPAEATP AEATPEAGPTYPEFVEPAGPASADAAPADESATEPPADPPAHPR" misc_feature 1559368..1559907 /locus_tag="CMS_1485" /old_locus_tag="CMS1485" /inference="protein motif:HMMPfam:PF01300" /note="HMMPfam hit to PF01300, SUA5/yciO/yrdC, N-terminal,score 4.3e-41" gene 1560252..1561571 /locus_tag="CMS_1486" /old_locus_tag="CMS1486" /db_xref="GeneID:6157306" CDS 1560252..1561571 /locus_tag="CMS_1486" /old_locus_tag="CMS1486" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710213.1" /db_xref="GI:170781881" /db_xref="GeneID:6157306" /translation="MTYYAAMAVVSAVITLVLSMVVMKLGYRYRLYPAIRARDVHTRP TPRLGGVAMFAGILVAFAVASQVSWFGLVFDRPGPVFAILGAALMIVVIGVLDDIYDL DWMIKLAGQILAAGLLAWQGVAISSLPIGGLTVGSSQMSIMLTIFAIVLVMNAVNFID GLDGLVAGVAIIANGAFFLYSFLLSDTATGQTERFNLASLISAILIGACLGFLPFNWH PAKLFMGDAGALLVGLLMATSAIAVTGEIDPNPETFGRSQLLPAFLPILLPFAILIVP LLDFALAVFRRLKAGKSPFSADRKHLHHRLLDMGHSRLHATLIFYAWTGVVSVGCLLM FVVQPYAWGVAFIAVGMVACAVVTLAPLSRRKRLEAAAQLVPAAAESEDAAAFDPLDE AATDRPLARLTESELEAVEREHAELATGAIATRPTDAPHPGTAKETT" misc_feature order(1560264..1560332,1560393..1560461,1560489..1560539, 1560573..1560641,1560669..1560728,1560747..1560806, 1560834..1560902,1560939..1560992,1561035..1561103, 1561191..1561259,1561272..1561340) /locus_tag="CMS_1486" /old_locus_tag="CMS1486" /note="11 probable transmembrane helices predicted for CMS1486 by TMHMM2.0 at aa 5-27, 48-70, 80-96, 108-130,140-159, 166-185, 195-217, 230-247, 262-284, 314-336 and 341-363" misc_feature 1560489..1560998 /locus_tag="CMS_1486" /old_locus_tag="CMS1486" /inference="protein motif:HMMPfam:PF00953" /note="HMMPfam hit to PF00953, Glycosyl transferase,family 4, score 8.2e-36" gene 1561568..1562038 /locus_tag="CMS_1487" /old_locus_tag="CMS1487" /db_xref="GeneID:6157307" CDS 1561568..1562038 /locus_tag="CMS_1487" /old_locus_tag="CMS1487" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710214.1" /db_xref="GI:170781882" /db_xref="GeneID:6157307" /translation="MTDSPSAPAPAERPAKKDVYTRILVGGALLALAIAVVGGIVGFA VDGGRGLLSAVIGSAMALVFLGLTAGSILFANRFQSSPIYPTLFFSVVLGAWLLKFVV FLAVAMVLKEQPWINLVVLFVTVIVGVVGALVMDMIVITKARVGYVSDAQLPGR" misc_feature order(1561634..1561702,1561721..1561789,1561817..1561885, 1561919..1561987) /locus_tag="CMS_1487" /old_locus_tag="CMS1487" /note="4 probable transmembrane helices predicted for CMS1487 by TMHMM2.0 at aa 23-45, 52-74, 84-106 and 118-140" gene 1562136..1563098 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /db_xref="GeneID:6157308" CDS 1562136..1563098 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710215.1" /db_xref="GI:170781883" /db_xref="GeneID:6157308" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1562208..1562273 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1562273..1562394 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1562394..1562459 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1562544..1563086 /locus_tag="CMS_1488" /old_locus_tag="CMS1488" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(1563152..1563547) /locus_tag="CMS_1489" /old_locus_tag="CMS1489" /db_xref="GeneID:6157309" CDS complement(1563152..1563547) /locus_tag="CMS_1489" /old_locus_tag="CMS1489" /codon_start=1 /transl_table=11 /product="putative globin" /protein_id="YP_001710216.1" /db_xref="GI:170781884" /db_xref="GeneID:6157309" /translation="MADLLANSFYEDVGGRPTFERLVREFYRGVADDPVLVAMYPEED LEGAIQRLTGFLEQYWGGPTTYSDQRGHPRLRMRHMPFRVNPDARDRWLAHMRVAVDS LDLSPTHEAQLWDYLERAAHAMVNTFDES" misc_feature complement(1563167..1563526) /locus_tag="CMS_1489" /old_locus_tag="CMS1489" /inference="protein motif:HMMPfam:PF01152" /note="HMMPfam hit to PF01152, Protozoan/cyanobacterial globin, score 7.3e-41" gene complement(1563547..1564890) /locus_tag="CMS_1490" /old_locus_tag="CMS1490" /db_xref="GeneID:6157310" CDS complement(1563547..1564890) /locus_tag="CMS_1490" /old_locus_tag="CMS1490" /codon_start=1 /transl_table=11 /product="putative mechanosensitive ion channel" /protein_id="YP_001710217.1" /db_xref="GI:170781885" /db_xref="GeneID:6157310" /translation="MDLSMVCCGDGSFFSTWGTLIQIVSYIVGGIVLRWILLVVIRNT VDQIVSGVKKRQNVDDTQSIQASPLTAVRVVQRTRTLGSVLSNITTVVVVVIVLSLVV EAAQPGVLTSLALLTAALGAGLGFGAQNIVKDILNGLFMVVEDQLGVGDVVDVGPATG VVETVGIRITTLRDVNGTLWFVRNGEILRVGNMSQGWARVVIDLAVPYDTDVQSVQER MLATATELASTPKWRSRIVEKPELWGIESISESAVVIRIVVKTRSNARDDVSRELRGR LKASLDAMGVTLPSLSAVVLTGFESAASVGGAHPPRTASTPVQQPEQPAPRKRAARKV AQRQPASSPAGSTGAASAPAGSTSPVVRGAAGSRPDPRATQMIPAQDPAPTADPDEDE VTAAWTVLPEEPASAPAPSREATTGTAAGSEDAAPPKPPRAPRQPRKPATPPEES" misc_feature complement(1564024..1564644) /locus_tag="CMS_1490" /old_locus_tag="CMS1490" /inference="protein motif:HMMPfam:PF00924" /note="HMMPfam hit to PF00924, MscS Mechanosensitive ion channel, score 1.5e-34" misc_feature complement(order(1564495..1564563,1564576..1564644, 1564780..1564848)) /locus_tag="CMS_1490" /old_locus_tag="CMS1490" /note="3 probable transmembrane helices predicted for CMS1490 by TMHMM2.0 at aa 15-37, 83-105 and 110-132" gene complement(1565048..1567591) /gene="pepN" /locus_tag="CMS_1491" /old_locus_tag="CMS1491" /db_xref="GeneID:6157311" CDS complement(1565048..1567591) /gene="pepN" /locus_tag="CMS_1491" /old_locus_tag="CMS1491" /EC_number="3.4.11.2" /codon_start=1 /transl_table=11 /product="aminopeptidase N" /protein_id="YP_001710218.1" /db_xref="GI:170781886" /db_xref="GeneID:6157311" /translation="MPGENLTRVEAEERAALLAVSEYDVTLDLTRGAEVFGSTTTVRF TATAGASTFIDAITRTVHSVTLNGRELDPADVSDGARIRLDDLAQENELTVVADAMYT NTGEGLHRFVDPVDDEVYLYSQFEVPDSRRMFAVFEQPDLKAVFRFTVTAPSHWEVVS NSPTPEPTAAADGASTWTFEPTLRMSSYITALIAGPYGVVRSELTSSDGRTIPLGVFA RKSLMEHLDADYVFEKTREGFAFYEERFDYPYPFPKYDQLFVPEFNAGAMENAGAVTF VESYVFRSKVTDAVKERRVTTILHELAHMWFGDLVTMKWWDDLWLNESFATYISTLAT AEATEWTGAWTTFNAGEKSWAYNQDQLPSTHPVYATINDLEDVQVNFDGITYAKGASV LRQLVAYVGQDEFLAGVAAYFQRHAFGNSTLRDFTSELEGTSGRDLERWTDLWLKTSG VNTLRPEIGTDEDGVITSFAVLQEAAEDYPTLRPHRLAIGFYELRDAHLVRTERFELD VDGDRTDVAELLGRQRPALVLLNDDDLTYAKVRLDPASLEVAMRHLAAFEDSLARSLV FASVWDATRDGEIRARDYARLVLDNVATEDESTALRYALAQLTVAATTYSAPDHRDEL LATVASELWALTAQAAPGSDNQFQFLRTFAQVASEPAQLDHVQALLDGTETLEGVEID ADLRWELLTALVAGGRAGTAEIDQALAADRTATGAQSAAQARAALPTAEGKKAAWASV WEADTEPNTIVRTTGLGFRRAADTELLRPYVGAYFDALQGVWESRSYAIAAALIGGFY PSPLADAELRDATVAWLDANPEPPALRRLVSELLSGVERALRAQAKDAE" misc_feature complement(1566425..1567552) /gene="pepN" /locus_tag="CMS_1491" /old_locus_tag="CMS1491" /inference="protein motif:HMMPfam:PF01433" /note="HMMPfam hit to PF01433, Peptidase M1, membrane alanine aminopeptidase, score 3.6e-68" misc_feature complement(1566674..1566703) /gene="pepN" /locus_tag="CMS_1491" /old_locus_tag="CMS1491" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene 1567744..1568370 /locus_tag="CMS_1492" /old_locus_tag="CMS1492" /db_xref="GeneID:6158858" CDS 1567744..1568370 /locus_tag="CMS_1492" /old_locus_tag="CMS1492" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710219.1" /db_xref="GI:170781887" /db_xref="GeneID:6158858" /translation="MSDVQSRPRTTAVEFWFDPSCPWAWMTSRWVDEVARHRDLDITW RVMSLAVLNEDKADDPNFAAFLPRALRFTRLVAAVEAEHGAEHVKPLYDALGTRIHLR DQKDADVVIPEVLAELGLPAGLAETSRTDRYDEPMRASHFDGIERVGQDVGTPVIAVD GVAFFGPVISPAPKGEEAVRLWDGVVAVAAYPGFFEIKRSRTVGPIFD" misc_feature 1567777..1568331 /locus_tag="CMS_1492" /old_locus_tag="CMS1492" /inference="protein motif:HMMPfam:PF01323" /note="HMMPfam hit to PF01323, DSBA oxidoreductase, score 0.00016" gene 1568484..1568972 /locus_tag="CMS_1493" /old_locus_tag="CMS1493" /db_xref="GeneID:6157312" CDS 1568484..1568972 /locus_tag="CMS_1493" /old_locus_tag="CMS1493" /note="catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity" /codon_start=1 /transl_table=11 /product="ribose-5-phosphate isomerase B" /protein_id="YP_001710220.1" /db_xref="GI:170781888" /db_xref="GeneID:6157312" /translation="MRIHIATDHAGLDFSRFLAEHLGAQGHDVVDHGPTSYDPLDDYP SFCIRAARAVVADQRGGTTALGVVFGGSGNGEQIAANKVEGVRAALVWNLSTAVLARQ HNDANVISIGARQHTVEEATAFIDAFIAEPFSAEERHARRIAQLAEYETTGAIAGHPV TD" misc_feature 1568679..1568924 /locus_tag="CMS_1493" /old_locus_tag="CMS1493" /inference="protein motif:HMMPfam:PF02502" /note="HMMPfam hit to PF02502, Ribose/galactose isomerase,score 1.1e-20" gene 1568979..1569968 /locus_tag="CMS_1494" /old_locus_tag="CMS1494" /db_xref="GeneID:6157313" CDS 1568979..1569968 /locus_tag="CMS_1494" /old_locus_tag="CMS1494" /codon_start=1 /transl_table=11 /product="putative formamidopyrimidine-DNA glycosylase" /protein_id="YP_001710221.1" /db_xref="GI:170781889" /db_xref="GeneID:6157313" /translation="MPEGHSIHRIAKQFEAHFVGDVVQASSPQGRFAEGAAVLDGRRL LAAKAVGKQMFLEFDGDVWLRVHLGLYGAWDFAGDVTTLNRMGQNGMRGDVPVDDRVD DAPVDAAAEDSLASIGAPRRARLRMAEQEKVHDPFSAEAWPPEPVGQVRVRLLTERAV ADLRGPTACVVASPDEVQQAIDKLGPDPLVDGGTRSEDRFTATVRKKPTAIGLLLMDQ AVVSGIGNVYRAELLFRARQNPHTPGRDVPEDVVRGLWRDWSKLLRKGVEVGQMMTMD GLRGKKLDAALRNRADRHWVYHREGLPCRVCGTNVVMEEAAGRKLYWCPYCQA" misc_feature 1568979..1569488 /locus_tag="CMS_1494" /old_locus_tag="CMS1494" /inference="protein motif:HMMPfam:PF01149" /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA glycolase, score 1.8e-08" misc_feature 1569528..1569812 /locus_tag="CMS_1494" /old_locus_tag="CMS1494" /inference="protein motif:HMMPfam:PF06831" /note="HMMPfam hit to PF06831, Formamidopyrimidine-DNA glycolase, score 3.1e-20" gene complement(1570087..1570572) /locus_tag="CMS_1495" /old_locus_tag="CMS1495" /db_xref="GeneID:6157314" CDS complement(1570087..1570572) /locus_tag="CMS_1495" /old_locus_tag="CMS1495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710222.1" /db_xref="GI:170781890" /db_xref="GeneID:6157314" /translation="MTDTVHVPTSSASADVAAGVAQFLSPVVVNLQALAVNGKQAHWH VRGANFIGVHEFLDVLVSHAQGWADTAAERVVALGLPIDARIETVAASTTTAALTPGF RPSSATIAEVIAQIDATMELVNRAVQELGEIDVNSQDVAIEIARGLEKDRWFLFAHIS E" misc_feature complement(1570399..1570449) /locus_tag="CMS_1495" /old_locus_tag="CMS1495" /note="PS00818 Dps protein family signature 1." gene complement(1570715..1575658) /locus_tag="CMS_1496" /old_locus_tag="CMS1496" /db_xref="GeneID:6157315" CDS complement(1570715..1575658) /locus_tag="CMS_1496" /old_locus_tag="CMS1496" /codon_start=1 /transl_table=11 /product="large integral membrane protein" /protein_id="YP_001710223.1" /db_xref="GI:170781891" /db_xref="GeneID:6157315" /translation="MATTPAAPRRRISVPAVLLSIGVVLLSVAAVFYVVYAFVTYGLV VRAAITAAVTLAALAAAGLLARRRLPGTAEAVGVAGIVLLHLDVWAVRSYDLAGAASN DPFVHFGIGTLVVSTALLALRSPLRIRAAGIAGWAGLTVGAGLLVGAVPSADAGTRTA LALAAASVVALVHAARSWAGSLPDALEREVLRVVGVTAATAAVVAGAASAVIPDAVPA LPLLVAAVASGAHAWALARPALTVEVRGDVATPDASGAIDGDASTDAMDVAPAAARDG ADPRSAALPLRVLAAVVAGAGAAAALPVTALMGGPALLTLCAQLVAAAVVTAVLDAAA RRLHDPLVTATARVGAVAALVITGLAGLPAAIAGFGGITATLIVGLPAWEHGPLDDAV VLLGRRSVVADLPGDVRAAAIGLVAVWILAAVSALVGRRLLARRRLLAWSGAAVVVAA IPALGPVAIVAGAYLVTSAGALVWRLSSRRHPGRAAVPAAALVALSLAAGALAWAVSW ASTGTWWAVAPFVVLLLVSGSRTARRDDTARLATAGAALAGLVAVGALAPSLTAARVI GTVPLSSALDAAADPVVLVLLASGLAALVSGILPGRPGVRRRALLSTVLLPACVAALP VAIVGADRVGGALTGSPVWPIAAQVVLVAGLVAWAVGGPRRVPLPARAPRSDEETADL RSPGTTALRRWRLTTAVLVAPTLLLAFVTAAALVDRGAVPHGTAAAAVALVVAGSALL AYRDASRGLRVALDAGTAAVATGALLVAVSFDPTRQGRELLWIPLLVLAVTALALSVA HDGLLLSRSARRAWGWTALATGIAALWSRLLAGGTTSAEAYWLPVAGALLLLAALMHR AAVRADGGGSGSQAGPRVRRGVTALTLAGILTAVLPLTAVGRPDDVLRPYILTSVCAV IALGGAAMLRRAASPVRPLVGAVVIGGGIGLLAIGGTHALRLSVGSVAREPAVDVQLA ITAVLLAGIGALVLRGARTAEDARLAGSAWVGTTVLVAVVMAASVGSGEGVVRPLVAS VALVAGAGMLLALRSLHRRMLAASAAAALLGAVVVALLAWRGGYIALDPAALAAPGIV AVLIAAVGAADRLRNPTPAPAPGRASEALDRLLRHAADASTGVLVAGTVVVGAASDGA GLPVALLLSSAAVLVSSSSSGSGSRARRRAGWIALVLGSAALWVALGRGRVDAVEAYV LPPACVMLVVAALLQRGSPGRRHPVASPAEARASGAAPVLLGALLLAALPTAVASWTG TPLRALVVGGAAGAVLLLAAAALRGAGAASPTRPLLVATAAASAIAVPLVGFGRAIAQ LAAYEPATFARTDLWTLSAAAVLVLAVGLLPVTTAVRRRSGAEDRPDAAAHASGSVGP VVGAGTPSDAPREPGMLMDALLRMAPRVVGLVAVIGAGAAGAAGILRAEAESMDGVGL RSALLVGLVSALYVACSPSGATATGRGPDPARLPAAAPPLHDRVLSVAALIVAGLVAA VLVVTGAADPVEAVTVPIAAALLVVGARRLVRDASAGSMRHLAPGLLVLLVPPLVADL GPSPAWRIVGLGILALATLLTGARLKLRAPFLIGAGVLLVHAVAQLWPWIREASATVP WWAWAGIGGVSLIAVAARYERRIRDVKEVAARVSALR" misc_feature complement(order(1570778..1570837,1570850..1570918, 1570937..1570996,1571009..1571068,1571087..1571140, 1571153..1571221,1571279..1571347,1571375..1571443, 1571591..1571659,1571702..1571770,1571789..1571857, 1571885..1571944,1572005..1572064,1572080..1572133, 1572368..1572436,1572449..1572508,1572527..1572595, 1572608..1572667,1572701..1572754,1572797..1572865, 1572890..1572943,1572971..1573030,1573088..1573147, 1573175..1573228,1573265..1573318,1573346..1573414, 1573433..1573501,1573514..1573582,1573673..1573741, 1573769..1573837,1573862..1573930,1573973..1574041, 1574075..1574128,1574138..1574206,1574225..1574284, 1574294..1574347,1574372..1574431,1574540..1574608, 1574669..1574728,1574741..1574809,1574954..1575013, 1575023..1575091,1575128..1575196,1575209..1575262, 1575281..1575349,1575392..1575445,1575464..1575532, 1575542..1575610)) /locus_tag="CMS_1496" /old_locus_tag="CMS1496" /note="48 probable transmembrane helices predicted for CMS1496 by TMHMM2.0 at aa 174-196, 200-222, 229-246,261-283, 290-307, 312-334, 347-369, 373-392, 441-463,468-487, 508-530, 567-586, 595-612, 616-635, 642-664,668-685, 697-719, 734-756, 765-787, 797-819, 850-872,877-899, 906-928, 938-955, 968-985, 995-1014, 1034-1053,1063-1080, 1089-1111, 1126-1143, 1155-1174, 1179-1201,1208-1227, 1232-1254, 1333-1350, 1356-1375, 1396-1415,1425-1447, 1454-1476, 1491-1513, 1563-1585, 1595-1617,1637-1659, 1664-1681, 1688-1707, 1712-1731, 1738-1760 and 1765-1784" misc_feature complement(1573511..1573582) /locus_tag="CMS_1496" /old_locus_tag="CMS1496" /inference="protein motif:HMMPfam:PF03929" /note="HMMPfam hit to PF03929, PepSY-associated TM helix,score 16" gene complement(1576297..1576367) /locus_tag="CMS_r042" /old_locus_tag="CMSr042" /db_xref="GeneID:6157316" tRNA complement(1576297..1576367) /locus_tag="CMS_r042" /old_locus_tag="CMSr042" /product="tRNA-Gly" /db_xref="GeneID:6157316" gene 1576557..1576629 /locus_tag="CMS_r025" /old_locus_tag="CMSr025" /db_xref="GeneID:6159042" tRNA 1576557..1576629 /locus_tag="CMS_r025" /old_locus_tag="CMSr025" /product="tRNA-Pro" /db_xref="GeneID:6159042" gene 1576698..1578140 /gene="tig" /locus_tag="CMS_1497" /old_locus_tag="CMS1497" /db_xref="GeneID:6159057" CDS 1576698..1578140 /gene="tig" /locus_tag="CMS_1497" /old_locus_tag="CMS1497" /note="Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="YP_001710224.1" /db_xref="GI:170781892" /db_xref="GeneID:6159057" /translation="MKTTVEKLSPTRVKLAISATPEDLKPHIDHAYGHIAEQVAIPGF RKGKVPPPIIDQRVGREAVLEHAVNDGMDGFYQAAVKETDIRPLGRPEADVKEWPGKD LTGDLLLEIEVDVRPEFDLPAYEGLELTVDSVEVTDDEVATELDSLRSRFGTLITVDR PAKTGDFVQIDLTATIAGNAVDTASGISYELGSGDLIDGIDEALESLTAGESTTFESK LLGGDNEGETAEIAVTVQSVKERELPEADDDFAQIASEFDTIDELRADLKVQVGKSKV FGQVTQARDQIVDKLLEGVEIPVPEKLVEDEVQRHLENENRLEDDVHRAEVKESSEKA FRQQLLLDVIAEKEELKVSQDELTQYLIQGAQQYNMEPNEFVQVLQQNNQIPAMVGEV ARNKALAVVLDKAKVVDADGKVVDVTEFTQPVVRDADAPVEEPADADAEAVVADAPAE EAVAEEAPAEKPKKKAPAKKKAAEKAADSE" misc_feature 1576698..1577162 /gene="tig" /locus_tag="CMS_1497" /old_locus_tag="CMS1497" /inference="protein motif:HMMPfam:PF05697" /note="HMMPfam hit to PF05697, Bacterial trigger factor,N-terminal, score 2.6e-53" misc_feature 1577163..1577405 /gene="tig" /locus_tag="CMS_1497" /old_locus_tag="CMS1497" /inference="protein motif:HMMPfam:PF00254" /note="HMMPfam hit to PF00254, Peptidylprolyl isomerase,FKBP-type, score 0.00029" misc_feature 1577406..1577891 /gene="tig" /locus_tag="CMS_1497" /old_locus_tag="CMS1497" /inference="protein motif:HMMPfam:PF05698" /note="HMMPfam hit to PF05698, Bacterial trigger factor,C-terminal, score 1.1e-29" gene 1578325..1578927 /gene="clpP" /locus_tag="CMS_1498" /old_locus_tag="CMS1498" /db_xref="GeneID:6159018" CDS 1578325..1578927 /gene="clpP" /locus_tag="CMS_1498" /old_locus_tag="CMS1498" /EC_number="3.4.21.92" /note="hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="YP_001710225.1" /db_xref="GI:170781893" /db_xref="GeneID:6159018" /translation="MGARTMAEPTLVPGVFDRLLKDRIIWLGSEVRDDNANEICAKIL LLAAEDSEKDIFLYINSPGGSITAGMAIYDTMQFVPNDIVTVGIGMAASMGQLLLTSG TKGKRYITPNARVLLHQPHGGFGGTSSDIQTQAQLILSMKQRLAEITAGQTGKTAEQI NEDGDRDRWFTAQEALEYGFVDHIRESATDVVGGGGTETS" misc_feature 1578340..1578888 /gene="clpP" /locus_tag="CMS_1498" /old_locus_tag="CMS1498" /inference="protein motif:HMMPfam:PF00574" /note="HMMPfam hit to PF00574, Peptidase S14, ClpP, score 1.7e-96" gene 1578963..1579643 /gene="clpP2" /locus_tag="CMS_1499" /old_locus_tag="CMS1499" /db_xref="GeneID:6158632" CDS 1578963..1579643 /gene="clpP2" /locus_tag="CMS_1499" /old_locus_tag="CMS1499" /EC_number="3.4.21.92" /note="hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="YP_001710226.1" /db_xref="GI:170781894" /db_xref="GeneID:6158632" /translation="MELPTFGGARGAGSTATSPSSRYILPSFEERTAYGYKRQDPYAK LFEDRIIFLGVQVDDASADDVMAQLLVLESMDPDRDIVMYINSPGGSFTAMTAIYDTM QYVSPQIQTVCLGQAASAAAVLLAGGAPGKRLALPNARVLIHQPATGESSGGQASDIE IQAAEIMRMRSWLEDTLAKHTNRDRDQINRDIERDKILGADEALEYGLIDQVLTSRKN LTAAIPAR" misc_feature 1579065..1579610 /gene="clpP2" /locus_tag="CMS_1499" /old_locus_tag="CMS1499" /inference="protein motif:HMMPfam:PF00574" /note="HMMPfam hit to PF00574, Peptidase S14, ClpP, score 3.4e-102" misc_feature 1579293..1579328 /gene="clpP2" /locus_tag="CMS_1499" /old_locus_tag="CMS1499" /note="PS00381 Endopeptidase Clp serine active site." gene complement(1579708..1580850) /locus_tag="CMS_1500" /old_locus_tag="CMS1500" /db_xref="GeneID:6158633" CDS complement(1579708..1580850) /locus_tag="CMS_1500" /old_locus_tag="CMS1500" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001710227.1" /db_xref="GI:170781895" /db_xref="GeneID:6158633" /translation="MTENTATASPDALSFAYWVPNVSGGLVTSDIEQRTHFDFDFNVR VAQLAERNGFDYALSQVRYAASYGADQQHESTSFSLGLLLATERLKVIAAVHPGLWHP GVLAKWIITADHMSHGRAAVNVVSGWLKDEFVGFGEPWLEHGERYRRTEEFIRVLRGL WTEKEFTHLGDFYRIHDFTLKPPPVDVPGRAHPEIFMGGNSTDAREMGGRVTDWYFSN GKDFAGFEEQRVDVLASARAAGRTERVKFGLNGFVIARDTEQEAQDVLEEIIAKANPD AVEGFRQAVKQAGASTGDGKGMWSDSTFRDLVQYNDGFRTGLIGTPEQIARRMVEYRK RGVDLLLLGFLHYLEDIEQFGTQVLPIVREFEREAIERGEIGEPAA" misc_feature complement(1579765..1580736) /locus_tag="CMS_1500" /old_locus_tag="CMS1500" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 7.6e-07" gene 1581017..1582297 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /db_xref="GeneID:6157317" CDS 1581017..1582297 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /note="binds and unfolds substrates as part of the ClpXP protease" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit ClpX" /protein_id="YP_001710228.1" /db_xref="GI:170781896" /db_xref="GeneID:6157317" /translation="MARIGESADLLKCSFCGKSQKQVQQLIAGPGVYICDECVELCNE IIEERLAEASEETTGEFDLPKPKEIFGFLDEYVIGQEAAKRALSVAVYNHYKRVRAVS TIGPAKTVGDEIEIAKSNILLIGPTGCGKTYLAQTLAKRLNVPFAVADATALTEAGYV GEDVENILLKLIQAADYDVKRAETGIIYIDEVDKIARKAENPSITRDVSGEGVQQALL KILEGTVASVPPQGGRKHPHQEFIQVDTTNVLFIVAGAFAGLEDIISQRAGKKGIGFG APLHRKDLNADVFGEVLPEDLHKFGLIPEFIGRLPVVTTVTQLDQRALMEILTKPRNA LVRQYQRMFELDGVELEFEQGALESIADLAVLRQTGARGLRAILEEVLGPIMFDIPSD DEVGRVVITRESVVQNAAPTIVPRASMLRAEKSA" misc_feature 1581053..1581163 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /inference="protein motif:HMMPfam:PF06689" /note="HMMPfam hit to PF06689, ClpX C4-type zinc finger,score 7.6e-24" misc_feature 1581362..1581955 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /inference="protein motif:HMMPfam:PF07724" /note="HMMPfam hit to PF07724, ATPase family associated with various cellular activities (AAA), score 4.3e-81" misc_feature 1581374..1581991 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /inference="protein motif:HMMPfam:PF00004" /note="HMMPfam hit to PF00004, AAA ATPase, central region,score 1e-29" misc_feature 1581389..1581412 /gene="clpX" /locus_tag="CMS_1501" /old_locus_tag="CMS1501" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1582379..1584442) /locus_tag="CMS_1502" /old_locus_tag="CMS1502" /db_xref="GeneID:6158635" CDS complement(1582379..1584442) /locus_tag="CMS_1502" /old_locus_tag="CMS1502" /codon_start=1 /transl_table=11 /product="putative oligopeptidase" /protein_id="YP_001710229.1" /db_xref="GI:170781897" /db_xref="GeneID:6158635" /translation="MTTPPNPFLEPSTLPYGMPPFADIREEHFRPAFQAGIAEHLAEV RAIADSPEPPTFENTLVALERAGRTLDRVGHVFFTLSSADSSPSTRELDAEIAPELAA HEDAIRLDSALYARIRAVHDTRHESGLDAESVYLVERYLAEFTITGAGLDDEAKARLP DLNRRLSVLTTRFESNLLEDTNDLAVVVDDPAQLDGLGAGAIAAAAQAAADRGLEGKH LITLVLPTGHPYLSQLTDRALRQRILAASLARSARGNAHDNRPLVLEITRLRAERAAL LGFPSHAAAVTADQTAGTPEAVADMLGRLAPAAARNARAEAVELQRVIDRTQEELGEP SFELAAWDWAFYSEKVRTERYDVDTERMRPYLEADRVLRDGVFRAATELYGVTFAERD DIPAYHPDARVFEVRDEDGSPVGLYVLDLHTRDSKRGGAWMNPLISQSALLDTPTVVL NNLNVPKPPAGQPTLLSYDEANTLFHEFGHALHGLFARVTYPRFAGTNVFRDFVEFPS QVNEMWMLWPEILASYAVHHETGEPMPAELVAAVQASSAFNEGFLTSEYLGAALLDQA WHRIGVDDVVEDVDAFQAEALAAVGLDVPAVLPRYASSYFQHTFAGGYDAGYYSYIWS EVLDADTVEWFHENGGLTRANGDRFRSRLLGVGGSKDPLEAYRDFRGRDAVIEPLLER RGLAD" misc_feature complement(1582388..1583755) /locus_tag="CMS_1502" /old_locus_tag="CMS1502" /inference="protein motif:HMMPfam:PF01432" /note="HMMPfam hit to PF01432, Peptidase M3A and M3B,thimet/oligopeptidase F, score 5.2e-131" misc_feature complement(1582997..1583026) /locus_tag="CMS_1502" /old_locus_tag="CMS1502" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene 1584482..1585285 /locus_tag="CMS_1503" /old_locus_tag="CMS1503" /db_xref="GeneID:6157318" CDS 1584482..1585285 /locus_tag="CMS_1503" /old_locus_tag="CMS1503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710230.1" /db_xref="GI:170781898" /db_xref="GeneID:6157318" /translation="MNSERYTHGHHESVLRVHSARTVRNSASYLEPHLRPGLDVLDVG SGPGTITVELADIVAPGCVVGLDMSEDVVRQASELAEGRGTANVEFVTGSVYELPYAD ASFDVVHAHQVLQHVGDPVRALEEMRRVTRPGGLVAARDVIYSKVALFPESDGLRLWA DVYLPVHRANGGEPDAGSRLKAWARQAGFTEIASSASVWCFSSDDERAWWGGAWADRA VASSFAGQAREGGFATDDDLQAIRAGWQEWAADEDGFLAMPHGEILARR" misc_feature 1584542..1585078 /locus_tag="CMS_1503" /old_locus_tag="CMS1503" /inference="protein motif:HMMPfam:PF01209" /note="HMMPfam hit to PF01209, UbiE/COQ5 methyltransferase, score 2.6e-07" gene complement(1585367..1585630) /locus_tag="CMS_1504" /old_locus_tag="CMS1504" /db_xref="GeneID:6157319" CDS complement(1585367..1585630) /locus_tag="CMS_1504" /old_locus_tag="CMS1504" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710231.1" /db_xref="GI:170781899" /db_xref="GeneID:6157319" /translation="MQLDTRWPVGGDAPADLPEVVILAVTTVESDVVALDADTSQWRW TLTWLERKPVVELDDGTVIRYDPVEDAATITIPGESTDDPFDD" gene complement(1585630..1586082) /locus_tag="CMS_1505" /old_locus_tag="CMS1505" /db_xref="GeneID:6157320" CDS complement(1585630..1586082) /locus_tag="CMS_1505" /old_locus_tag="CMS1505" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710232.1" /db_xref="GI:170781900" /db_xref="GeneID:6157320" /translation="MTISIRPVRDGDFFPWFDLFSGYAEFYGTELTDESAVLAWSHLI DDAHASSALVAVDDAHEGALVGLAHFHRFSRLSRGTDGLLLDDLYVREILRRQGVGEQ LIAAVADVARRDGASMLRWITAEDNADAQRLYDRVARRTTWVTYEQDV" misc_feature complement(1585663..1585917) /locus_tag="CMS_1505" /old_locus_tag="CMS1505" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 6.3e-11" gene complement(1586079..1588724) /gene="valS" /locus_tag="CMS_1506" /old_locus_tag="CMS1506" /db_xref="GeneID:6157321" CDS complement(1586079..1588724) /gene="valS" /locus_tag="CMS_1506" /old_locus_tag="CMS1506" /note="valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain" /codon_start=1 /transl_table=11 /product="valyl-tRNA synthetase" /protein_id="YP_001710233.1" /db_xref="GI:170781901" /db_xref="GeneID:6157321" /translation="MADERRPDTAEGTTGEVARVPDKPALEGLEAKWGGRWQADGTYD FRRDEAAAGTVFSIDTPPPTASGSLHIGHVFSYTHTDVIARYRRMRGESVFYPLGWDD NGLPTERRVQNFYGVRCDPTLPYDPSYRPSETGGTSKPADQQPISRRNFIELCERLTE EDEKQFEDLFRTLGLSVDWRQSYRTIGSEAQVASQRAFLRNLARGEAYQADAPTLWDV TFRTAVAQAELEDREQPSAYHRLAFHRSGGDDVIIDTTRPELLAACVALVAHPDDERY QGLFGTTVTTPVFGVEVPVLAHHLAQPDKGSGIAMVCTFGDLNDVVWWRELQLENRAI VGFDGRIVSEAPAAITSDAGREAYAAIAGKTVFSAKAAMVELLTESGELIGEPRKITH PVKFYEKGDKPLEIVSTRQWYIRNGGRDEELRAGLIGRGREIGFVPDFMRVRYENWVG GLNGDWLVSRQRFFGVPLPVWYPLDADGNPEFERAITPTEDQLPVDPSSDPAPGYAED QRGVPGGFQGELDVMDTWATSSLTPQLAGGWERDPELFDLVFPFSMRPQGQDIIRTWL FSTVLRAELEHGAAPWRTAAISGWILDPDRKKMSKSKGNVVTPAATLEQFGSDAVRYW AASARLGVDAAMDPQNPTQIKIGRRLAIKVLNAAKFILSFEAPEGARATQAIDVGMLA ALAEVVETATTALDEYDHARALEVTESFFWTFCDDYLELVKDRAYSADADPADRGSAV AALREALDVLLRLFAPFVPFAAEEAWSWSHDGSIHTAAWPTAPTPDAPASGGTADPRL LGLAGRALVGIRRAKTDAKASQKTPVAEAVVSASPEDIRSLELVARDLRAVGRITDLT FTEGDGPAVARITLAPVEQPEENRA" misc_feature complement(1586814..1588631) /gene="valS" /locus_tag="CMS_1506" /old_locus_tag="CMS1506" /inference="protein motif:HMMPfam:PF00133" /note="HMMPfam hit to PF00133, Aminoacyl-tRNA synthetase,class Ia, score 7.1e-45" misc_feature complement(1588503..1588538) /gene="valS" /locus_tag="CMS_1506" /old_locus_tag="CMS1506" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene complement(1588872..1590815) /gene="pckG" /locus_tag="CMS_1507" /old_locus_tag="CMS1507" /db_xref="GeneID:6157322" CDS complement(1588872..1590815) /gene="pckG" /locus_tag="CMS_1507" /old_locus_tag="CMS1507" /EC_number="4.1.1.32" /note="catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="YP_001710234.1" /db_xref="GI:170781902" /db_xref="GeneID:6157322" /translation="MTSIQDAPPATTTGRARAAAASPASGALAPESVPLPPGTAAPAH CRDLRIAEWVAEVARLTLPDRVVWCTGSVAEYDRITREMVDAGTLIRLNPEWRPHSFL ARSDPADVARVEDCTFICSRDEADAGPTNNWRDPARTRAELDGLFAGSMRGRTLYVVP FSMGPLGGAISQLGVQITDSPYVVASMALMTRMGDDALRLIGPDTTWVRALHGLGAPL VDDAGRRTADVPWPHNVDKRICHFPEEREIISFGSGYGGNALLGKKCFSLRIASAMAR DGGWLAEHMLLIRITSPEGRRFHVAAAFPSACGKTNLAMLTPTIPGWTVETLGDDIAW LQPDVQGRLRAVNPERGLFGVAPGTGETTNPVAMSTVWGNAIFTNVALRPDGDVWWEG MTPTPPAGLLDWQGNPWSPGSGTPAAHPNARFTVAIEQCPSLADDWDDPDGVVVDAIL FGGRRATNVPLVAEADDWEHGVFIGATMASEQTAAAEGRVGELRHDPFAMQPFCGYDM ADHWRHWLEVGRGLGDGAPRVFQVNWFRKGEDGSFLWPGFGENARVLEWIVRRVEDRV PVRSTPVGGLPLPEDLDVAGLELDAGALEELLALDPALWLEELDAVDAHFARFGGRVP AELTARLDAMRRAFRETATAGPA" misc_feature complement(1588893..1590662) /gene="pckG" /locus_tag="CMS_1507" /old_locus_tag="CMS1507" /inference="protein motif:HMMPfam:PF00821" /note="HMMPfam hit to PF00821, Phosphoenolpyruvate carboxykinase (GTP), score 0" misc_feature complement(1589880..1589906) /gene="pckG" /locus_tag="CMS_1507" /old_locus_tag="CMS1507" /note="PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature." gene 1590889..1592352 /locus_tag="CMS_1508" /old_locus_tag="CMS1508" /db_xref="GeneID:6158852" CDS 1590889..1592352 /locus_tag="CMS_1508" /old_locus_tag="CMS1508" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710235.1" /db_xref="GI:170781903" /db_xref="GeneID:6158852" /translation="MKMRRCSRRGECMDQLVIGRRIRHARKGAGLTLQALGERAGILP SQLSMIENGRRETRLSTLGRIAGALDVDVTHLLAADAPDARSALEIELDRAQRSSLYG SLGLPAVPASRALPQETLEALVGLHRELARRARESIATPEEARRANTEQRLMMRERDN HIPEIEELAERMLADVGHRSGALSHRSVSRMAEGLGFELIYVDDLPRSTRSVTDLGEG RIYLPPASIPGGHGLRSMALQAMAHRVLGHEEPASYADFLRQRLEINYFAAACLMPLT QSVEFLAEAKARRDLAVEDFRDAFGVTHEAAALRLTNISTTHLDLRVHFLRVGGDGAV YKAYENDGLPLPVDVTGAVEGQPVCREWAARGAFDRTNRTTEFHQYTDTPAGTFWCST QTGSTAEGEYSISFGVPFAHAKWFRGRETTARSVSRCPDESCCRRADPEDAGRWRDRA WPSARLHAHILAPLPRGSFPGVDDRELYAFLDRHAGA" misc_feature 1590952..1591116 /locus_tag="CMS_1508" /old_locus_tag="CMS1508" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 4.2e-13" misc_feature 1590979..1591044 /locus_tag="CMS_1508" /old_locus_tag="CMS1508" /note="Predicted helix-turn-helix motif with score 1586.000, SD 4.59 at aa 31-52, sequence LTLQALGERAGILPSQLSMIEN" gene complement(1592371..1594035) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /db_xref="GeneID:6157323" CDS complement(1592371..1594035) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /codon_start=1 /transl_table=11 /product="putative nucleotide-binding ABC transporter subunit" /protein_id="YP_001710236.1" /db_xref="GI:170781904" /db_xref="GeneID:6157323" /translation="MSGGSGQDAPAPAIRVEDLRVSFGGVPVVHGVSLRIAPGECLAL VGTSGSGKSVIARSLLGLAGPGADVQADALEIAGRDLRGAGPREWRRVRGSGVGLVLQ DALSSLDPLRPIGREIGDALLVHGMRDPRARRARVLELLERVGMPDPEARVHQRSGEL SGGLRQRALLAAALALDPPLLVADEPTTALDATVQARIIDLLADLRTRGQATLLVSHD LAVVARLADRVAVMHDGRIVEEGPTAQILRAPAHRRTRALVAAVPTGVPRGVPLSEAR LEAAAESPESSAAPHADDRVVLRATGLSRSYRGPAGSARTAVDDVSLQVRRGRTLGLV GGSGSGKTTVARLLLALEEPDAGVVTLDGEPWSGIPERARRGRRARVGAVYQDPLASF DPRWSVDRILRDALDVAGLSGPDVRDTPCTLLAQVGLEPAILRRSPARLSGGQRQRVA IARALAARPDLLICDEPVSALDIAVQAQVLDLLDELQRRLGLGILLISHDLGVVAHMS DEVHVMSEGRVVESGSAADVLTRPTHPVTRALLDAVPRLDEGVAPR" misc_feature complement(1592485..1593054) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.6e-58" misc_feature complement(1592671..1592715) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /note="PS00211 ABC transporters family signature." misc_feature complement(1593010..1593033) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1593331..1593921) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.2e-50" misc_feature complement(1593877..1593900) /locus_tag="CMS_1509" /old_locus_tag="CMS1509" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1594032..1594892) /locus_tag="CMS_1510" /old_locus_tag="CMS1510" /db_xref="GeneID:6157324" CDS complement(1594032..1594892) /locus_tag="CMS_1510" /old_locus_tag="CMS1510" /codon_start=1 /transl_table=11 /product="putative ABC transporter integral membrane protein" /protein_id="YP_001710237.1" /db_xref="GI:170781905" /db_xref="GeneID:6157324" /translation="MSDPRAATLLAAPPARPPVRVLAAAGTTGAAIVVVLLLAAAFAP GLVAPGDPLAIAPAEAFRAPGAGHLLGTDESGRDVLTRVVHGAGPSLVIGVSATAIGL GLGAVLGLAAALLGRVADFAVNRVIEVVFAFPGLLLALFLIVILGPGIGSATLAVGIS AAPGYARIIRGRVMSVRRSAYVEAATVLGRPPLVVLARHILPNTAAPLLVLGTLGVGQ AIVWASSLSYLGLGTVPPDPEWGAMLAAGRTYIGSAPWLTVVPGLMIVLTATASTMLG RTLERRVRGS" sig_peptide complement(1594032..1594217) /locus_tag="CMS_1510" /old_locus_tag="CMS1510" /note="Signal peptide predicted for CMS1510 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.803 between residues 62 and 63" misc_feature complement(1594038..1594634) /locus_tag="CMS_1510" /old_locus_tag="CMS1510" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.5e-29" misc_feature complement(order(1594065..1594133,1594227..1594295, 1594386..1594445,1594458..1594517,1594551..1594619, 1594764..1594832)) /locus_tag="CMS_1510" /old_locus_tag="CMS1510" /note="6 probable transmembrane helices predicted for CMS1510 by TMHMM2.0 at aa 21-43, 92-114, 126-145, 150-169,200-222 and 254-276" gene complement(1594889..1595965) /locus_tag="CMS_1511" /old_locus_tag="CMS1511" /db_xref="GeneID:6157325" CDS complement(1594889..1595965) /locus_tag="CMS_1511" /old_locus_tag="CMS1511" /codon_start=1 /transl_table=11 /product="putative ABC transporter integral membrane protein" /protein_id="YP_001710238.1" /db_xref="GI:170781906" /db_xref="GeneID:6157325" /translation="MRRGRVVPGSASRGRALLGALAARIGGAVLVLWAVATVTFLAVR LIPGDPAQAILGGPGSQAPPEAVAAVRAEYGLDQPLLVQYLAQLGRLAQGDLGRSYAL REDVVTVLARQLPGTLLLAVLALAVAWILALGLALVSSGAGRVAGAVGAGVEIVAASL PHFWIGVVLILLFSTGLGWLPAVSGSSPAGLVLPVLTLAIPLAGFLGQIMREALLDAL DSPFALAARARGESEAGVRLRHALRHAAAPGIALSGWAFGFLISGAVVVEQIFARPGL GRTALSAVTSRDVPVIVGVVLVVAVVYIVLTAVTDLLARIVDPRLVAARTGPAPVAGG AASPPVDGEPDAADAVVDLPAAAR" sig_peptide complement(1594889..1595047) /locus_tag="CMS_1511" /old_locus_tag="CMS1511" /note="Signal peptide predicted for CMS1511 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.384 between residues 53 and 54" misc_feature complement(1594997..1595626) /locus_tag="CMS_1511" /old_locus_tag="CMS1511" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 5.1e-31" misc_feature complement(order(1595027..1595095,1595153..1595221, 1595345..1595404,1595447..1595515,1595552..1595620, 1595837..1595905)) /locus_tag="CMS_1511" /old_locus_tag="CMS1511" /note="6 probable transmembrane helices predicted for CMS1511 by TMHMM2.0 at aa 21-43, 116-138, 151-173,188-207, 249-271 and 291-313" gene complement(1595962..1597608) /locus_tag="CMS_1512" /old_locus_tag="CMS1512" /db_xref="GeneID:6157326" CDS complement(1595962..1597608) /locus_tag="CMS_1512" /old_locus_tag="CMS1512" /codon_start=1 /transl_table=11 /product="putative ABC transporter substrate-binding protein" /protein_id="YP_001710239.1" /db_xref="GI:170781907" /db_xref="GeneID:6157326" /translation="MIPTPRTRALAGLGALAATTLVLTGCTSATPEASTTPVSGGTLV YASGDAEPECLDPHVGGNYPQALVSSQFLEPLVSLDGKGGITPWLADSWTWSDDGLGL TLALRQGVTFTDGTPFDADAVVANIRHVQDPTTLSSTGYLALQAITDATAVDASTVQL TLSTPDSALLESLSQPWLAMESPAGIARGTDANCAQPIGTGPFSVERWDRQQSISLVR NDAYSSPPADAAHTGPAYLDRIDWRFLPDAASRYAALQSGEVDVIDNAQPDAIASAAS GGTLGELDAPRPGASNRIELNSGQAPFDDERVREAFIRSADVDAGITALFQGTAERSY SPLASTEPAAVSDPDLFGIDADRAAALLDQAGWSAKDADGIRTKDGKRLTLRFPVSTN QSIPAEQSLFEQIQATTKQVGFDVQLEPMDLGSWYEALGDDAYELVSAPYTKAGPDVL RILYDTSGITPAPSGYFANHAKVSVPEIDQALAEARATTDPDRRTALYADVQERVMAG YWILPLYDQQNHFLHGTAVEGLRALPSVATPTLYDAWLAR" sig_peptide complement(1595962..1596060) /locus_tag="CMS_1512" /old_locus_tag="CMS1512" /note="Signal peptide predicted for CMS1512 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.539 between residues 33 and 34" misc_feature complement(1596217..1597359) /locus_tag="CMS_1512" /old_locus_tag="CMS1512" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 7.9e-59" misc_feature complement(1597531..1597563) /locus_tag="CMS_1512" /old_locus_tag="CMS1512" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1597644..1598318 /locus_tag="CMS_1513" /old_locus_tag="CMS1513" /db_xref="GeneID:6157327" CDS 1597644..1598318 /locus_tag="CMS_1513" /old_locus_tag="CMS1513" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710240.1" /db_xref="GI:170781908" /db_xref="GeneID:6157327" /translation="MRVFLYRVQQYAPAVTPVHQDGRMTPARPAGRPRRSSRATLEEA AAELFLENTYAATTIEQIAQRAGVSRATFFNYFSSKADLLWAGLDDTLGALGAALSGV EPGGPPVDGVVDALIGAACSRGVGWLPLALTQHEVMGLGADVQGEGVARAAPLVDPVA QALARASGRRASAAPVRVAAAVIAAATAAAVVAWAGDGVGRGPLEGAIRRALDPLRPA LAATLG" misc_feature 1597764..1597904 /locus_tag="CMS_1513" /old_locus_tag="CMS1513" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 1.9e-13" misc_feature 1597812..1597877 /locus_tag="CMS_1513" /old_locus_tag="CMS1513" /note="Predicted helix-turn-helix motif with score 1899.000, SD 5.65 at aa 57-78, sequence TTIEQIAQRAGVSRATFFNYFS" misc_feature 1598163..1598231 /locus_tag="CMS_1513" /old_locus_tag="CMS1513" /note="1 probable transmembrane helix predicted for CMS1513 by TMHMM2.0 at aa 174-196" gene 1598326..1599108 /locus_tag="CMS_1514" /old_locus_tag="CMS1514" /db_xref="GeneID:6157328" CDS 1598326..1599108 /locus_tag="CMS_1514" /old_locus_tag="CMS1514" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710241.1" /db_xref="GI:170781909" /db_xref="GeneID:6157328" /translation="MTDGRATLASGDDGRMTADAAPQLDHSALASSFGSVADQYDRVR PGYPDDAITWMLPAGARRVVDLGAGTGKLTRLLSARGIAVTAVEPDAQMRQVLQASSP EVDVRAGSGEAIPVGAGEEDTVLVAQAWHWMDAGAAAREAARVLRPGGRLGIVWNQMD TEVDWVRELDALLSPGRRAADRATEPGPFPGFGPVEHASFPHVHRMTPDDVVALAGSI SRIIVLPDVERARALDDIRTLLAGHPDTAGRDELDLPYRADA" gene 1599226..1600188 /locus_tag="CMS_1515" /old_locus_tag="CMS1515" /db_xref="GeneID:6157329" CDS 1599226..1600188 /locus_tag="CMS_1515" /old_locus_tag="CMS1515" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710242.1" /db_xref="GI:170781910" /db_xref="GeneID:6157329" /translation="MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIVALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 1599298..1599363 /locus_tag="CMS_1515" /old_locus_tag="CMS1515" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 1599622..1600164 /locus_tag="CMS_1515" /old_locus_tag="CMS1515" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.4e-41" gene complement(1600201..1600707) /locus_tag="CMS_1516" /old_locus_tag="CMS1516" /db_xref="GeneID:6157330" CDS complement(1600201..1600707) /locus_tag="CMS_1516" /old_locus_tag="CMS1516" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710243.1" /db_xref="GI:170781911" /db_xref="GeneID:6157330" /translation="MTASLVLLSDTHLPRRAKDLPRALWRAIDAADVVVHAGDWVDEA ALDALEARAGRLLACWGNNDPAGLRARLPETARAVIEGIRFAVTHETGASTGRERRMD AAFPETDVLVFGHSHIPWDTVTPAGLRLLNPGSPTDRRRQPDFTWMTATADAGRLDVE LHRSATRD" misc_feature complement(1600351..1600701) /locus_tag="CMS_1516" /old_locus_tag="CMS1516" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 1.4e-09" gene 1600797..1601306 /locus_tag="CMS_1517" /old_locus_tag="CMS1517" /db_xref="GeneID:6157331" CDS 1600797..1601306 /locus_tag="CMS_1517" /old_locus_tag="CMS1517" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710244.1" /db_xref="GI:170781912" /db_xref="GeneID:6157331" /translation="MPADLAWMVQLNDAAVPAVPPMDAASLGDVLGHADLAIAVVDQD APDAPPVGMLLAMQPGGAYDSPNYRWFAEHGVDGLYVDRIVVADGHRGLRLGQVLYAR VFAEARRTGRAAVTCEVNTLPPNPGSLAFHGRLGFVRVGELVDADGLHAVAMLSAPVD PDPSVPTAA" misc_feature 1600932..1601210 /locus_tag="CMS_1517" /old_locus_tag="CMS1517" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 0.00049" gene 1601364..1601977 /locus_tag="CMS_1518" /old_locus_tag="CMS1518" /pseudo /db_xref="GeneID:6157332" gene 1601992..1602738 /locus_tag="CMS_1519" /old_locus_tag="CMS1519" /db_xref="GeneID:6157333" CDS 1601992..1602738 /locus_tag="CMS_1519" /old_locus_tag="CMS1519" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710245.1" /db_xref="GI:170781913" /db_xref="GeneID:6157333" /translation="MPGPGPERVPGLVPAVPASVGGEWRTATITAVEHPTPTTVLLRF DVPDRIPHLPGQHCVVRLRAEDGYTAQRSYSILSAPHEPGVELLMERYEDGEVSGFFA DVARVGDEIEMRLPIGGFFVWDGATPAVALGGGTGAVPLVAMVRHARHLGVPHLVRVA VSARTAADVPCRAELEAAGALVVTTRERYGARGYGRLRAEEVAELATGAGVALVCGST AFAGGATRLLLDAGVGRDAIRIEQFGPSGE" misc_feature 1602067..1602357 /locus_tag="CMS_1519" /old_locus_tag="CMS1519" /inference="protein motif:HMMPfam:PF00970" /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding region, score 3.3e-16" gene 1602785..1603336 /locus_tag="CMS_1520" /old_locus_tag="CMS1520" /db_xref="GeneID:6157334" CDS 1602785..1603336 /locus_tag="CMS_1520" /old_locus_tag="CMS1520" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710246.1" /db_xref="GI:170781914" /db_xref="GeneID:6157334" /translation="MGSGCRMERSVVLLRGINVGRAKQVPMAQLTAALDGLGYVRVRT HLRSGNAVVDHERPSGRGAAVAIEDAVRLATGVTADVHLVPAADFRRIAAGIPFGAVA DDPARLLVSFLDRPLDPMPAPPPAAAIAPDLVEVAPDAVYSWHPDGVSASRVPPAFWR GLGASVTARNARTVAALVALLDA" gene 1603454..1604452 /locus_tag="CMS_1521" /old_locus_tag="CMS1521" /db_xref="GeneID:6157335" CDS 1603454..1604452 /locus_tag="CMS_1521" /old_locus_tag="CMS1521" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710247.1" /db_xref="GI:170781915" /db_xref="GeneID:6157335" /translation="MDVSRFADRWKSHILETFSADAQGRPQWIQDLEDGDDAGWFGPG SAVWAVHGGMPTLVAGIRALLMQTLHPGAMAGVHDWSRYREDPLGRLAGTVRWVITTS FGDRDTAVDVSRRVRGYHRKVQGTFVDGHGVERPYSANDPDLLSWVHIVFTDAFLSTH MQWGPSIPGGPDRYVAEWAKAGELMGVEAPPRSHAELHAQIDAFHDQGLLRADERTRE TISFLREPPLRPSMLPAYRVLFAGAVASLEPRYRELLGLDKASFGPFPLPALASTRVM LGVAGRVMGEQSTSHEAALKRIARLQGGTGASSSGAPAGTCPGRGDDAGHRAQPAA" gene 1604531..1605823 /locus_tag="CMS_1522" /old_locus_tag="CMS1522" /db_xref="GeneID:6157336" CDS 1604531..1605823 /locus_tag="CMS_1522" /old_locus_tag="CMS1522" /EC_number="2.7.7.7" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="YP_001710248.1" /db_xref="GI:170781916" /db_xref="GeneID:6157336" /translation="MSRQDGSTRRTSDASADDSEATILHIDMDAFFAAVELLERPELR GTPVIVGGSSGRGVVTSATYEARRFGVRSAMPMAQALRLCPQATVIGGHMEKYAHWSR VVMGIFRDVTPLVEPLSIDEAFLDVAGARGLFGSPAEIGVMIRRCVHAETGLTCSVGA ASTKFVAKLASTRCKPDGLLVIPAAETLPFLHGLPVGALWGVGKTTEEALLRRGLRTV ADIADTPLPALQSMLGESAGARLHDLSWGRDPRRVSTHREEKSMGHENTFHDDVADPE IVRRELLGQATRVAERLRRAGLTARTVSLKLRYSDFRTITRSRTLAEPTDVARRIYDE IRDVYEQVARPGDRIRLVGVRAEQLDDADNRAVALWDADEGWREAERTVDQAVERFGR GAIGPASLLRKPGAKRATVSDPRTEAASRGVLPGHPPD" misc_feature 1604606..1605613 /locus_tag="CMS_1522" /old_locus_tag="CMS1522" /inference="protein motif:HMMPfam:PF00817" /note="HMMPfam hit to PF00817, UMUC-like DNA-repair protein, score 4.8e-111" misc_feature 1605122..1605145 /locus_tag="CMS_1522" /old_locus_tag="CMS1522" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1606108..1606335 /locus_tag="CMS_1523" /old_locus_tag="CMS1523" /db_xref="GeneID:6157337" CDS 1606108..1606335 /locus_tag="CMS_1523" /old_locus_tag="CMS1523" /note="N-terminal truncation relative to homologue" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710249.1" /db_xref="GI:170781917" /db_xref="GeneID:6157337" /translation="MILGLVSVFFFWTFLCPLIGLVFGIIGIRKEPAGRGFAITGLIL NGLLLLIPVAVVLSIIVAGGTLFGIAATTPR" sig_peptide 1606108..1606179 /locus_tag="CMS_1523" /old_locus_tag="CMS1523" /note="Signal peptide predicted for CMS1523 by SignalP 2.0 HMM (Signal peptide probability 0.655) with cleavage site probability 0.260 between residues 24 and 25" misc_feature order(1606120..1606188,1606246..1606314) /locus_tag="CMS_1523" /old_locus_tag="CMS1523" /note="2 probable transmembrane helices predicted for CMS1523 by TMHMM2.0 at aa 5-27 and 47-69" gene complement(1606383..1607696) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /db_xref="GeneID:6157338" CDS complement(1606383..1607696) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /codon_start=1 /transl_table=11 /product="putative nucleotide-sugar dehydrogenase" /protein_id="YP_001710250.1" /db_xref="GI:170781918" /db_xref="GeneID:6157338" /translation="MRISVIGCGYLGTVHAACMSRLGHDVVAIDVDAAKIASLQTGVA PFFEPGLPDLLTEQLATGRLRFTTDTAEAAGSRVHFIAVGTPQKRGENAADMTYVDAA VEALIPHLAPGDVVTGKSTVPVGTARRLAERIDARVPGATLVWNPEFLREGFAVEDTL TPDRFVYGLPTGDAGEAARAALDEVYATAIGTGTARVTTDYETAELVKVSANAFLATK ISFINAMAEVCEATGADVTQLADAIGYDDRIGRRFLNAGIGFGGGCLPKDIRAFMARA GELGADQALTFLREVDSINMRRRVRAVDVAREVCGGSLLGRNIAVLGLAFKPESDDVR DSPALSISAQLQLQGARVLATDPYANENSRRRFPELTYVDSWQEAARDADAVMVLTEW KQYRAIDPAELKAIVATPVIVDGRNCLDPVAWRAAGWRYRGMGRP" misc_feature complement(1606434..1606739) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /inference="protein motif:HMMPfam:PF03720" /note="HMMPfam hit to PF03720, UDP-glucose/GDP-mannose dehydrogenase, score 1.6e-37" misc_feature complement(1606803..1607096) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /inference="protein motif:HMMPfam:PF00984" /note="HMMPfam hit to PF00984, UDP-glucose/GDP-mannose dehydrogenase, score 3e-53" misc_feature complement(1607124..1607696) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /inference="protein motif:HMMPfam:PF03721" /note="HMMPfam hit to PF03721, UDP-glucose/GDP-mannose dehydrogenase, score 4e-70" misc_feature complement(1607337..1607360) /locus_tag="CMS_1524" /old_locus_tag="CMS1524" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1607866..1609668) /locus_tag="CMS_1525" /old_locus_tag="CMS1525" /db_xref="GeneID:6157339" CDS complement(1607866..1609668) /locus_tag="CMS_1525" /old_locus_tag="CMS1525" /codon_start=1 /transl_table=11 /product="putative sugar synthase" /protein_id="YP_001710251.1" /db_xref="GI:170781919" /db_xref="GeneID:6157339" /translation="MTDDRFDIWAPKARTLALSVGDERLPLSPVGDGWWTLDAARAEA LPSGDLDYGYLVDDSGTPLPDPRSRRQPEGVHGRSRTYDPSSFAWTDQAWTGRQLAGA VVYEMHIGTFTPEGTLDSAIDRLDHLVALGVDLVEVLPVNGFNGTHNWGYDGVLWYAV QETYGGPEAYQRFVDACHARGLGVVQDVVYNHLGPSGNYLPVYGPYLHEASANTWGSS LNLDGEDSGPVREYIIDNALMWLGDYHVDALRLDAVHALVDDTATHLLEELAVQVDVL SAHVGRPLTLIAESDLNDPKLITSREAHGYGLDAQWSDDFHHAVHVALTGETTGYYAD FAPLGAIAKVITRGFFHDGTWSSFRGRVHGRPLDTERIPAHRLVVANQNHDQIGNRAT GDRLTATLDEGGLALAAVLTLTSPFTPMLFMGEEWGATTPWQFFTSHPEHDLGEATAK GRIAEFAKMGWDESVVPNPQDLSTFQDSKLDWSELYGAEAADSQHARLFALYSELIRL RRTHPDLTDPRFAEVEVEVHEEARLLVMDRGELSIVVNLSDEERRVPVVGDRPAMLFA TEPGVSLGADEVVLPARSAAILGPVADSAEALLA" misc_feature complement(1608142..1609353) /locus_tag="CMS_1525" /old_locus_tag="CMS1525" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 6.7e-10" gene complement(1609665..1612016) /locus_tag="CMS_1526" /old_locus_tag="CMS1526" /db_xref="GeneID:6157340" CDS complement(1609665..1612016) /locus_tag="CMS_1526" /old_locus_tag="CMS1526" /codon_start=1 /transl_table=11 /product="maltooligosyl trehalose synthase" /protein_id="YP_001710252.1" /db_xref="GI:170781920" /db_xref="GeneID:6157340" /translation="MRTPISTYRFQVRESFDLAAVAEQLPYVKDLGADWVYLSPILAA EPGSDHGYDVVDHSQVDPSRGGAAGMKAVADRAHELGLGVLVDIVPNHVGVATPVESL WWWDLLTHGTASRYADAFDVDWDFGQGKVRIPVLGDGESELDELQLVRGDDGTVELRY YDQRFPVAPGTAEDDADAVAVHERQSYELVNWRRADAELNYRRFFAVNTLAGIRVELP RVFEESHAEISRWFREGLADGLRVDHPDGLLDPKGYLDDLARITGGAYVLVEKILEPG ETLPTDWATAGTTGYDALADIDRVLVDPDGQVELDHLDASLRGLPQGELTSWAAMIRG TKRGIADGILRSEVLRLERLVEDAPDDAADAIAELLATFPVYRSYLPGGLHHLEEAAE AARASRPDLVATIDALMPQLADPSTLVAQRFQQTSGMVMAKGVEDTAFYRYSRLVSLN EVGADPSIFAIDVDDFHARQQDRLRSAPHAMTTLSTHDTKRGEDVRARIDVLSETPEA WRDALGQLREVAPIGDGPFENLLWQTLVGTWPASRERLHAYAEKASREAGDSTTWTAP DEAFEERMHALVDAAFDDPRARTIVAGLYDRLSGPGWSNSLAAKAIQLTAPGMPDVYQ GSELWETSLVDPDNRREVDFGMRRAALDAVLKGAEPAIDETGAAKLLVTARALRLRRD HPELFTGYEPVRATGDAAAHVIAFDRGGAITVATRLPVGLESGGGWGSTSITLPEGEL VDHVSGRRVDGGRVSVAALLAEYPVAILAPASTAADLTTGSRA" misc_feature complement(1609992..1611989) /locus_tag="CMS_1526" /old_locus_tag="CMS1526" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 1.1e-07" gene complement(1612013..1614218) /gene="treX" /locus_tag="CMS_1527" /old_locus_tag="CMS1527" /pseudo /db_xref="GeneID:6157341" misc_feature complement(1612220..1612264) /gene="treX" /locus_tag="CMS_1527" /old_locus_tag="CMS1527" /note="PS00678 Trp-Asp (WD) repeats signature." /pseudo misc_feature complement(1612833..1613825) /gene="treX" /locus_tag="CMS_1527" /old_locus_tag="CMS1527" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 2.8e-08" /pseudo misc_feature complement(1613931..1614191) /gene="treX" /locus_tag="CMS_1527" /old_locus_tag="CMS1527" /inference="protein motif:HMMPfam:PF02922" /note="HMMPfam hit to PF02922, Glycoside hydrolase, family 13, N-terminal, score 1.1e-29" /pseudo gene 1614426..1614758 /locus_tag="CMS_1529" /old_locus_tag="CMS1529" /db_xref="GeneID:6159023" CDS 1614426..1614758 /locus_tag="CMS_1529" /old_locus_tag="CMS1529" /note="Possible C-terminal membrane association" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710253.1" /db_xref="GI:170781921" /db_xref="GeneID:6159023" /translation="MTNLVAQLAENVKNAGVGTVYGDPLDIDGSTIVPVAFAWYGFGG GSDLPDSDGNVAGGGGGGGATWPIGAYIATDGEVRFQPNVIALLAVATPVIWISGKVL VKLIKTLK" misc_feature 1614675..1614743 /locus_tag="CMS_1529" /old_locus_tag="CMS1529" /note="1 probable transmembrane helix predicted for CMS1529 by TMHMM2.0 at aa 84-106" gene 1615017..1615667 /locus_tag="CMS_1530" /old_locus_tag="CMS1530" /db_xref="GeneID:6157342" CDS 1615017..1615667 /locus_tag="CMS_1530" /old_locus_tag="CMS1530" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710254.1" /db_xref="GI:170781922" /db_xref="GeneID:6157342" /translation="MTASPSSTASAPAGVAARSPRSGLRARWRVIDIVVASVLGVASG LVFVIWNTASVPVAGVFQPLLPGLQALAGGGWLFAGVLTGIVIRKPGAALYGELLAAF VSMLVGNVWGVSTLLSGLTQGLGAELVLLAFLYANWRAYVAVLAGMGAGLGMAITDLV TYYVGSTPLFATIYTVAALVSGAVVAGLLPWLVARALARTGALSRFASGRDTAARV" misc_feature order(1615098..1615166,1615209..1615277,1615290..1615358, 1615371..1615424,1615443..1615511,1615524..1615592) /locus_tag="CMS_1530" /old_locus_tag="CMS1530" /note="6 probable transmembrane helices predicted for CMS1530 by TMHMM2.0 at aa 28-50, 65-87, 92-114, 119-136,143-165 and 170-192" gene 1615670..1617232 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /db_xref="GeneID:6157343" CDS 1615670..1617232 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710255.1" /db_xref="GI:170781923" /db_xref="GeneID:6157343" /translation="MRRPGRRPSLLEASRVPLAGPEATAERAGGASVRAEGWGWRHAG RTAWAVRDVDLVIEPGERVLLLGASGAGKTTLMHALAGVLGGDDEGETRGSLRVDGQD PAARRGRAGLVLQDPDAQVILSRVGDDVAFGCENLGVPRDEIWVRVRAALDAVGLDVA LDRSTTALSGGQKQRLALAGVLAMRPGLLLLDEPTANLDPDGVGEVRRAVESVVESSG ATLVVIEHRVAVWQDLVDRVVVFAADGGILADGAPDDVLRDQGASLAAAGVWVPGREP AEPVRERAAPAPLLRADGLAVGRGGARGTAVAEGIGVAFASGRVTALTGPNGGGKSTL ALTLGGLLPALSGRVVAEAALAGGLGADPAAWRSRELAARIGTVFQDPEHQFLAGTVR AELGVGPRAVGMDPAEAARRVDELLVRLRLDGLAEANPFTLSGGEKRRLSVATALATA PRLLVLDEPTFGQDARTWAELVALLADLVDREGVGVLAVTHDADLVRALADEVLRLDA VPGGTARLEAVR" misc_feature 1615847..1616401 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.2e-42" misc_feature 1615868..1615891 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1616171..1616215 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /note="PS00211 ABC transporters family signature." misc_feature 1616621..1617196 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.8e-41" misc_feature 1616642..1616665 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1616966..1617010 /locus_tag="CMS_1531" /old_locus_tag="CMS1531" /note="PS00211 ABC transporters family signature." gene 1617229..1618023 /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /db_xref="GeneID:6157344" CDS 1617229..1618023 /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /codon_start=1 /transl_table=11 /product="putative cobalt transport protein" /protein_id="YP_001710256.1" /db_xref="GI:170781924" /db_xref="GeneID:6157344" /translation="MSVAVPPVVPAARATGLAAVNPVARLAAALVLTLVLVLSLDAVS AGTALLLELLLLPFAGIRPRAFLVRGIPVWIAAPAAGLTILLYGRTSGDVYAQFLLVV VSEDSVLLAVATTLRVLAIGVASLVLFTDVDPTDLADGLAQVARLPSRFVLGALAGVR LVGLLLDDWRSLELARRARGVADRGRIRRFAGQAFALLVLSIRRGSKLATAMEARGFG GATARTWARPSVVGRREALVLAVALLVAASAVAAAVTAGTWGSVAA" sig_peptide 1617229..1617363 /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /note="Signal peptide predicted for CMS1532 by SignalP 2.0 HMM (Signal peptide probability 0.633) with cleavage site probability 0.327 between residues 45 and 46" misc_feature 1617265..1617906 /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /inference="protein motif:HMMPfam:PF02361" /note="HMMPfam hit to PF02361, Cobalt transport protein,score 9.8e-10" misc_feature order(1617334..1617402,1617421..1617489,1617547..1617615, 1617937..1618005) /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /note="4 probable transmembrane helices predicted for CMS1532 by TMHMM2.0 at aa 36-58, 65-87, 107-129 and 237-259" misc_feature 1617532..1617606 /locus_tag="CMS_1532" /old_locus_tag="CMS1532" /note="PS00043 Bacterial regulatory proteins, gntR family signature." gene 1618013..1618561 /locus_tag="CMS_1533" /old_locus_tag="CMS1533" /db_xref="GeneID:6157345" CDS 1618013..1618561 /locus_tag="CMS_1533" /old_locus_tag="CMS1533" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001710257.1" /db_xref="GI:170781925" /db_xref="GeneID:6157345" /translation="MRPDAGERRPALVLVDGPSGSGKSTLADSLVRDGDADAGLPPGA QLLRLDDVYPGWDGLEAASRHLERHVLPGMRPGGRPRWRRWDWVAGAPAEWHDLDPAR PLVVEGCGSLTRAAAGLATHRIWVEADDAVRRGRAIARDGESFAVEWERWDAQWRAHV AREDPRALADVVVRTDAVAAAG" misc_feature 1618061..1618084 /locus_tag="CMS_1533" /old_locus_tag="CMS1533" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1618571..1618843 /locus_tag="CMS_1534" /old_locus_tag="CMS1534" /db_xref="GeneID:6157346" CDS 1618571..1618843 /locus_tag="CMS_1534" /old_locus_tag="CMS1534" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710258.1" /db_xref="GI:170781926" /db_xref="GeneID:6157346" /translation="MTDSAPSDVRYLAVFADGPLEGTTETRVLVDGQHDETISTMSAV EGKESLFQYRAGAVSEIAGEQRVTYTYVVDGSDDVLGEGDDESLEL" gene complement(1619002..1619352) /locus_tag="CMS_1535" /old_locus_tag="CMS1535" /db_xref="GeneID:6157347" CDS complement(1619002..1619352) /locus_tag="CMS_1535" /old_locus_tag="CMS1535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710259.1" /db_xref="GI:170781927" /db_xref="GeneID:6157347" /translation="MLHLDPDDFERLVVDKLDDLPDEMVDGLDNVVFVVEDRPEDGTL DLLGLYDGVAMTERGQYGFGEMPDRIVVYREPHLHEAEDMDALRDLVHVTLVHEIAHF HGIDDDRLHELGWA" misc_feature complement(1619008..1619340) /locus_tag="CMS_1535" /old_locus_tag="CMS1535" /inference="protein motif:HMMPfam:PF06262" /note="HMMPfam hit to PF06262, Protein of unknown function DUF1025, score 3.3e-41" gene complement(1619451..1619523) /locus_tag="CMS_r043" /old_locus_tag="CMSr043" /db_xref="GeneID:6157348" tRNA complement(1619451..1619523) /locus_tag="CMS_r043" /old_locus_tag="CMSr043" /product="tRNA-His" /db_xref="GeneID:6157348" gene complement(1619567..1620187) /locus_tag="CMS_1536" /old_locus_tag="CMS1536" /db_xref="GeneID:6159043" CDS complement(1619567..1620187) /locus_tag="CMS_1536" /old_locus_tag="CMS1536" /note="3'-5' exoribonuclease specific for small oligoribonuclotides" /codon_start=1 /transl_table=11 /product="oligoribonuclease" /protein_id="YP_001710260.1" /db_xref="GI:170781928" /db_xref="GeneID:6159043" /translation="MGNNADRLVWIDCEMTGLDLAIDELVEVAVVVTDFDLVPVDAGF TIVINPDPAALANMGEFVTEMHRSSGLLDEIPAGVSLADAEFAVLEYLLQHVPNGGKA PIAGNTIGTDRAFLAKYMPRVDAHLHYRSVDVSSIKVLAKEWFPRIYFNSPEKNGGHR ALADILESIRELEYYRRAAFVPAPGPPTDDVQAISADVTSAWASRL" misc_feature complement(1619672..1620166) /locus_tag="CMS_1536" /old_locus_tag="CMS1536" /inference="protein motif:HMMPfam:PF00929" /note="HMMPfam hit to PF00929, Exonuclease, score 8.5e-18" gene 1620244..1620459 /locus_tag="CMS_1537" /old_locus_tag="CMS1537" /db_xref="GeneID:6157349" CDS 1620244..1620459 /locus_tag="CMS_1537" /old_locus_tag="CMS1537" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710261.1" /db_xref="GI:170781929" /db_xref="GeneID:6157349" /translation="MITLLAVLLIVNGVWNVVVWPQFLKRVAKDPRARNADGSRTPFF TVHLVLVSVSLLLALVSIVAAVAAFLS" misc_feature order(1620247..1620315,1620385..1620453) /locus_tag="CMS_1537" /old_locus_tag="CMS1537" /note="2 probable transmembrane helices predicted for CMS1537 by TMHMM2.0 at aa 2-24 and 48-70" gene 1620547..1620825 /locus_tag="CMS_1538" /old_locus_tag="CMS1538" /db_xref="GeneID:6157350" CDS 1620547..1620825 /locus_tag="CMS_1538" /old_locus_tag="CMS1538" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710262.1" /db_xref="GI:170781930" /db_xref="GeneID:6157350" /translation="MPCHTTRRTLAEVQRLLPWLPVEELDVATHPDRAEAEGIRSTPT ILVRAGHFEVLPAEGVPTAPQVLQAVVRAMDGTPPSGPAGAPGREDPA" gene 1620840..1620912 /locus_tag="CMS_r012" /old_locus_tag="CMSr012" /db_xref="GeneID:6157351" tRNA 1620840..1620912 /locus_tag="CMS_r012" /old_locus_tag="CMSr012" /product="tRNA-Arg" /db_xref="GeneID:6157351" gene 1620953..1621774 /gene="nadE" /locus_tag="CMS_1539" /old_locus_tag="CMS1539" /db_xref="GeneID:6159031" CDS 1620953..1621774 /gene="nadE" /locus_tag="CMS_1539" /old_locus_tag="CMS1539" /EC_number="6.3.1.5" /note="catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers" /codon_start=1 /transl_table=11 /product="NAD synthetase" /protein_id="YP_001710263.1" /db_xref="GI:170781931" /db_xref="GeneID:6159031" /translation="MRDIQSQIIDALEVRPTIDPADEVRKRVDFLKAYLRSTGAEGFV LGVSGGQDSSLAGRLAQLAVEELAAEGLLAEFVAVRLPYGVQADEEDAQLALSFIQPK SSVVFDIKRAVDGFQAEYADAAGHAMTDFTKGNVKARSRMIAQYALAGQARLLVIGTD HAAEAVTGFFTKYGDGGADVLPLTGLTKRQGRALLERLGAPERLYLKAPTADLLDETP GQTDEANLGLTYADIDDFLEGRDVDDEVAEAIEARYASTEHKRRVPASMFDDWWK" misc_feature 1621193..1621756 /gene="nadE" /locus_tag="CMS_1539" /old_locus_tag="CMS1539" /inference="protein motif:HMMPfam:PF02540" /note="HMMPfam hit to PF02540, NAD+ synthase, score 4e-63" gene complement(1621861..1622568) /locus_tag="CMS_1540" /old_locus_tag="CMS1540" /db_xref="GeneID:6158837" CDS complement(1621861..1622568) /locus_tag="CMS_1540" /old_locus_tag="CMS1540" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710264.1" /db_xref="GI:170781932" /db_xref="GeneID:6158837" /translation="MQWWNDLLDALASERGTQLLSGVVVPFVAIVVAGVLAAVIARGA TQRILTRHDREVKAAAIGVLVDAARQASVWDGLTAQERVLADRAAGEADIRIRLLPVK GAATAATWAAHEITEFKRGSGSFGFQFDAQLAEFRDRMVEWQHHPGRARKIFQGDISR WQFEDDQPAADSAATRPQTHQAETTAVAPVPVPWRSGSDDQPAAERRVESPDEQYSPP VPSSAAANSRTAEGERR" misc_feature complement(1622446..1622514) /locus_tag="CMS_1540" /old_locus_tag="CMS1540" /note="1 probable transmembrane helix predicted for CMS1540 by TMHMM2.0 at aa 19-41" gene complement(1622652..1622888) /locus_tag="CMS_1541" /old_locus_tag="CMS1541" /db_xref="GeneID:6157352" CDS complement(1622652..1622888) /locus_tag="CMS_1541" /old_locus_tag="CMS1541" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710265.1" /db_xref="GI:170781933" /db_xref="GeneID:6157352" /translation="MPSITYPPLARSAAQVRELHDGLLRVTRPDGAVLGYVERMHDPQ GERFRAKRLRRDAQGFVPLGDFWSLQDAVDCLRF" gene 1623059..1623586 /gene="msrA" /locus_tag="CMS_1542" /old_locus_tag="CMS1542" /db_xref="GeneID:6157353" CDS 1623059..1623586 /gene="msrA" /locus_tag="CMS_1542" /old_locus_tag="CMS1542" /EC_number="1.8.4.11" /codon_start=1 /transl_table=11 /product="peptide methionine sulfoxide reductase" /protein_id="YP_001710266.1" /db_xref="GI:170781934" /db_xref="GeneID:6157353" /translation="MQTFILAGGCFWCLDAVYRTLDGVQDVISGYIGGHTAHPSYDAV CTGATGHAEAVKVVFDEEVIPADVILDVFFTLHDPRQLNRQGADVGTQYRSAMFPADA EQEQLFRDAIARAGDLLDGTPVTTIEPLGTWHDAEDYHQDFFAKNPGQGYCNAVAVPK VNKVRKSFAQYVRAA" misc_feature 1623062..1623532 /gene="msrA" /locus_tag="CMS_1542" /old_locus_tag="CMS1542" /inference="protein motif:HMMPfam:PF01625" /note="HMMPfam hit to PF01625, Peptide methionine sulfoxide reductase, score 5.2e-67" gene 1623693..1623926 /locus_tag="CMS_1543" /old_locus_tag="CMS1543" /db_xref="GeneID:6158825" CDS 1623693..1623926 /locus_tag="CMS_1543" /old_locus_tag="CMS1543" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710267.1" /db_xref="GI:170781935" /db_xref="GeneID:6158825" /translation="MTTSTSTTRTNGVPRTAGKTWVAFGATGAIASIHSHDDGYEVRS LHRGVVAGAYPTLEIAKAALRAGRDDDLRFTEH" gene 1624032..1624378 /locus_tag="CMS_1543A" /old_locus_tag="CMS1543A" /pseudo /db_xref="GeneID:6157354" gene 1624375..1624938 /locus_tag="CMS_1544" /old_locus_tag="CMS1544" /db_xref="GeneID:6157355" CDS 1624375..1624938 /locus_tag="CMS_1544" /old_locus_tag="CMS1544" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001710268.1" /db_xref="GI:170781936" /db_xref="GeneID:6157355" /translation="MSGSPRWLEPDQQRAWRTVIVALNHVTERIERQLLRDSGMPHAY YMILVRLSEAEDVALPMSVLARALQASASRTSHAVTRLEQLGWVRRTRSPHDGRSLLA ELTDQGRATLEAAAPGHAEEVLRTVFDPLTADQTAQLEDIARDILASMSASSLDDGQG SARGDDLAIPPAPDRDDDTACADESAA" misc_feature 1624492..1624812 /locus_tag="CMS_1544" /old_locus_tag="CMS1544" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 2.3e-21" gene 1624935..1625414 /locus_tag="CMS_1545" /old_locus_tag="CMS1545" /db_xref="GeneID:6157356" CDS 1624935..1625414 /locus_tag="CMS_1545" /old_locus_tag="CMS1545" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710269.1" /db_xref="GI:170781937" /db_xref="GeneID:6157356" /translation="MIRVSRALLAPALLVALLLSACTQTSTAPEPTPAAVTATAAPGA APASPTVAPVDPDGTAKGNLPAFEAAAGAVVAADADAQGRALVDALVAVGFPKDRMEV TADATPLGNAVDSILVAVHMPDACLIGQRARDGFSAHVEPALSSGRCLVGQTRMIDW" sig_peptide 1624935..1625054 /locus_tag="CMS_1545" /old_locus_tag="CMS1545" /note="Signal peptide predicted for CMS1545 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.354 between residues 40 and 41" misc_feature 1624968..1625000 /locus_tag="CMS_1545" /old_locus_tag="CMS1545" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1625478..1627160 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /db_xref="GeneID:6157357" CDS 1625478..1627160 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /note="ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001710270.1" /db_xref="GI:170781938" /db_xref="GeneID:6157357" /translation="MAEYIYSMVRARKSVGDKLILDDVTMSFIPGAKIGVVGPNGAGK STILKIMAGLDTPSNGEAKLSPGYSVGILMQEPELDESKTVLENVQEGVGPLKAQVDR YNEIAAAMAEPDADFDTLLAEMGTLQEAIDAADGWELDSQLEQAMDALRTPPGDASVA NLSGGEKRRVALCKLLLQKPDLLLLDEPTNHLDAESVLWLEQHLSKYPGAVLAVTHDR YFLDHVAEWIAEVDRGRLYPYEGNYSTYLEKKQERLSVQGKKDAKLSKRLAEELDWVR SNAKGRQAKSKARLARYEEMVTEAERTRKLDFEEIQIPVGPRLGSQVIDADKLHKQFG ERVLIDDLSFTLPRNGIVGVIGPNGVGKTTLFKTIVGFEPLDSGELKVGDTVDISYVD QSRGGIDPEKSLFEVVSDGQDYIQVGKQEVPARAYVSTFGFKGPDQQKKAGILSGGER NRLNLALTLKQGGNLLLLDEPTNDLDVETLGSLENALLEFPGCAVVITHDRWFLDRIA THILSYEGTEEEPANWYWFEGNFESYEQNKIERLGADAAKPHRSAYRKLTRD" misc_feature 1625568..1626179 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.2e-51" misc_feature 1625589..1625612 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1625961..1626005 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /note="PS00211 ABC transporters family signature." misc_feature 1626522..1627028 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.2e-37" misc_feature 1626543..1626566 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1626810..1626854 /locus_tag="CMS_1546" /old_locus_tag="CMS1546" /note="PS00211 ABC transporters family signature." gene 1627164..1627637 /locus_tag="CMS_1547" /old_locus_tag="CMS1547" /db_xref="GeneID:6157358" CDS 1627164..1627637 /locus_tag="CMS_1547" /old_locus_tag="CMS1547" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710271.1" /db_xref="GI:170781939" /db_xref="GeneID:6157358" /translation="MTRVHVPIHLRWADLDAYDHVNNVEVLRLLEEARVRAFWQGEDD GEDAGLALIDASAGAATMTLIARQEIEYLLPISYGRRPLDVQVWLGRLGGSSFEACYE VRTPAGVEPAALYARASTTIVLVDAATGRPRRITEDERAAWSTYLEEPVAFSRRG" misc_feature 1627215..1627499 /locus_tag="CMS_1547" /old_locus_tag="CMS1547" /inference="protein motif:HMMPfam:PF03061" /note="HMMPfam hit to PF03061, Thioesterase superfamily,score 8e-06" gene complement(1627647..1628552) /gene="tesB" /locus_tag="CMS_1548" /old_locus_tag="CMS1548" /db_xref="GeneID:6157359" CDS complement(1627647..1628552) /gene="tesB" /locus_tag="CMS_1548" /old_locus_tag="CMS1548" /EC_number="3.1.2.-" /codon_start=1 /transl_table=11 /product="acyl CoA thioesterase II" /protein_id="YP_001710272.1" /db_xref="GI:170781940" /db_xref="GeneID:6157359" /translation="MTDHASDIPDDGPLAGLLTALDPTDTGARTSEDISTGPSQWMPM GRVFGGQVLAQSLVAAMRTTDPERRPHSMHGYFLRPGDVTKPITFSVDRIHDGRSFST RRTQAYQDGRPILSMIASFQDADEGLEHQAPMPEGIPEPESLPSARDVLSRIDHPVAA HWANDRPFDMRHVEQPVYFGAAPERVAHQAVWIRAIGRLPDDPAVHLASLAYASDYSI LESIYRRHGLSWATPGIKAASLDHAMWFHRFGRADEWMLYVQESTSAQGGRGLSLGRI YSRDGVLLASVAQEGMVRVPLADRA" misc_feature complement(1627677..1628069) /gene="tesB" /locus_tag="CMS_1548" /old_locus_tag="CMS1548" /inference="protein motif:HMMPfam:PF02551" /note="HMMPfam hit to PF02551, Acyl-CoA thioesterase,score 7.7e-42" misc_feature complement(1628169..1628465) /gene="tesB" /locus_tag="CMS_1548" /old_locus_tag="CMS1548" /inference="protein motif:HMMPfam:PF02551" /note="HMMPfam hit to PF02551, Acyl-CoA thioesterase,score 6.2e-29" gene 1628635..1629330 /locus_tag="CMS_1549" /old_locus_tag="CMS1549" /db_xref="GeneID:6159010" CDS 1628635..1629330 /locus_tag="CMS_1549" /old_locus_tag="CMS1549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710273.1" /db_xref="GI:170781941" /db_xref="GeneID:6159010" /translation="MTPSFALRDALALGDLQTFLGRSARVDDGAVRLIGSGGVLAVYT SVLQPAGLLDRSPTVLGLRTFAAETQAPVDSVVPIRALLDRLARLEGPATGSPGEPVG VLVPPDTATAPWAGISPPRAGWERVADVPTASLRAAARAGIDEVAAAVPSGIGEQIVT RVRGEVWGRPVDGAPDVVGGGAFAAYSLGFLGPDPDGDAEADDVEPPVAVFRTGPWTR LTMARGHVLVRRL" gene 1629428..1630390 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /db_xref="GeneID:6157360" CDS 1629428..1630390 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /note="N/R/C heme-binding?" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710274.1" /db_xref="GI:170781942" /db_xref="GeneID:6157360" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1629500..1629565 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1629565..1629686 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1629686..1629751 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1629836..1630378 /locus_tag="CMS_1550" /old_locus_tag="CMS1550" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(1630535..1631095) /locus_tag="CMS_1551" /old_locus_tag="CMS1551" /db_xref="GeneID:6157361" CDS complement(1630535..1631095) /locus_tag="CMS_1551" /old_locus_tag="CMS1551" /codon_start=1 /transl_table=11 /product="putative haem-binding protein" /protein_id="YP_001710275.1" /db_xref="GI:170781943" /db_xref="GeneID:6157361" /translation="MTEQQPYTVVREESSFQVRRYPEHVVAEVTVRADFDAAGNTAFR ALFGYISGANAAGGKVAMTAPVVQAPVSQEIAMAAPVVQTAGQDAGSHVVAFVLPSTF TEATAPAPTSPEVSLRTVPEALVAATTYSGRWTRARYDERCEELIAALAEASITTLSA PRFARFDPPYKPWFLRRNEVLIDVAG" misc_feature complement(1630541..1631095) /locus_tag="CMS_1551" /old_locus_tag="CMS1551" /inference="protein motif:HMMPfam:PF04832" /note="HMMPfam hit to PF04832, SOUL heme-binding protein,score 6.3e-46" gene complement(1631261..1631800) /locus_tag="CMS_1552" /old_locus_tag="CMS1552" /db_xref="GeneID:6157362" CDS complement(1631261..1631800) /locus_tag="CMS_1552" /old_locus_tag="CMS1552" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710276.1" /db_xref="GI:170781944" /db_xref="GeneID:6157362" /translation="MADISPSPVPSGSDDAAPPPRGRQRVLDHAARLGIDVEVVDRPD ASSLEEAAAGLGIEASHLVKSLVVKRHDGALLIALVPGDRQISWSKPRALVGVNKLSM PAPEVALEATGYERGTITPLGADGDLPVYADERIAGRRIGMGAGEHGVSALVDADALV AALGATVGDITDELTIRRL" misc_feature complement(1631291..1631707) /locus_tag="CMS_1552" /old_locus_tag="CMS1552" /inference="protein motif:HMMPfam:PF04073" /note="HMMPfam hit to PF04073, YbaK/prolyl-tRNA synthetase associated region, score 6.5e-21" repeat_region complement(1631740..1631751) /old_locus_tag="CMS1552" gene 1631852..1632577 /locus_tag="CMS_1553" /old_locus_tag="CMS1553" /db_xref="GeneID:6157363" CDS 1631852..1632577 /locus_tag="CMS_1553" /old_locus_tag="CMS1553" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710277.1" /db_xref="GI:170781945" /db_xref="GeneID:6157363" /translation="MTDSTAPALPAIRVDVWSDIACPWCYVGKRRFERGARDFQARTP DAPEIAITYRSFELAPDTPVDFQGTEVDFLAGHKRIPADRVATMLDDMTRLAAAEGLA YDYDALQHTNTVLAHELLHLARVRGVQLEMVERLLKAYFTEGRHVGRVPDLVELAVEV GLDADEVREALESHRHLDDVRADQAQALAYGIQGVPFFVIDERFGISGAQDPSVFTSA LGEALAARDGDTVRVVAGEEATR" misc_feature 1631888..1632511 /locus_tag="CMS_1553" /old_locus_tag="CMS1553" /inference="protein motif:HMMPfam:PF01323" /note="HMMPfam hit to PF01323, DSBA oxidoreductase, score 3.7e-44" gene 1632574..1632792 /locus_tag="CMS_1554" /old_locus_tag="CMS1554" /db_xref="GeneID:6157364" CDS 1632574..1632792 /locus_tag="CMS_1554" /old_locus_tag="CMS1554" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710278.1" /db_xref="GI:170781946" /db_xref="GeneID:6157364" /translation="MSPSPATGALPVAASPFTMRGSVDAAVCEGDSCLVPGASAVDAP AADDSSADASAAADLARVRDAIDAGLAI" gene 1632885..1634111 /locus_tag="CMS_1555" /old_locus_tag="CMS1555" /db_xref="GeneID:6157365" CDS 1632885..1634111 /locus_tag="CMS_1555" /old_locus_tag="CMS1555" /codon_start=1 /transl_table=11 /product="putative tRNA-dihydrouridine synthase" /protein_id="YP_001710279.1" /db_xref="GI:170781947" /db_xref="GeneID:6157365" /translation="MSSPTLAPVPSAADAPGAPAPSAEPALRIGGIPLDMPVVLAPMA GITNTAFRRLCREFGAGLYVSEMITSRALVERTPESMRLITHHPSEKVRSIQLYGVDP KTVREAVTMLVAEDRADHIDLNFGCPVAKVTRKGGGAALPWKLGLFTDIVEGAVKAAG NIPLTVKMRKGIDADHLTYLEAGRAAEGAGVASIALHARTAADYYSGHADWSAIAKLK QAIRNVPVLGNGDIWAAEDAIRMMDETGADGVVVGRGCLGRPWLFGDLAAAFHARAAG LDPADTPRAHPSQGQVADTFRRHVELLTEFFESEERGCRDARKHVAWYFKGYPVGGDL RAALASASSLAEIDGLLATLDRDQPYPGAGAEGARGRQGSMKRTALPDRWLESRDIDA QDAMEIADGEIHNSGG" misc_feature 1632999..1633979 /locus_tag="CMS_1555" /old_locus_tag="CMS1555" /inference="protein motif:HMMPfam:PF01207" /note="HMMPfam hit to PF01207, Dihydrouridine synthase,DuS, score 7.1e-108" misc_feature 1633245..1633301 /locus_tag="CMS_1555" /old_locus_tag="CMS1555" /note="PS01136 Uncharacterized protein family UPF0034 signature." gene 1634116..1635375 /locus_tag="CMS_1556" /old_locus_tag="CMS1556" /db_xref="GeneID:6157366" CDS 1634116..1635375 /locus_tag="CMS_1556" /old_locus_tag="CMS1556" /note="dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase-like protein" /protein_id="YP_001710280.1" /db_xref="GI:170781948" /db_xref="GeneID:6157366" /translation="MTTRSTYSETDAERWYPEQHSSRRSDFARDRARLLHSSALRRLA AKTQVLSPMAGLDFARNRLTHSLEVAQVGRELASSLDLDPDVVDTACLAHDIGHPPFG HNGERALNDWASDIGGFEGNAQTLRLLTRLEPKVIGPEARPYGLNLTRASLDASCKYP WPSSQSVPDPSGRGKFGFYDDDVAAFEWLREGAPAGRKCIEAEVMDLSDDIAYSVHDF EDAIVGGYVDVRALGARVDHEELVDSMVAWIGGAHSHEELIQAFDRLDSLDVWVDEYD GGRGAQAALKDLTSQLIGRFAGAATQLTRATHTDRSLIRFGAHVVVPRAIQAEIAVLK GIVAAFVMSKNTRQPIYARQREVLAGLADALHARGADELDPGFAGDWREAADDGARKR VIVDQVASLTDQSAISWYERLCARPVF" misc_feature 1634299..1634757 /locus_tag="CMS_1556" /old_locus_tag="CMS1556" /inference="protein motif:HMMPfam:PF01966" /note="HMMPfam hit to PF01966, Metal-dependent phosphohydrolase, HD subdomain, score 1.8e-14" gene 1635440..1637332 /gene="dnaG" /locus_tag="CMS_1557" /old_locus_tag="CMS1557" /db_xref="GeneID:6157367" CDS 1635440..1637332 /gene="dnaG" /locus_tag="CMS_1557" /old_locus_tag="CMS1557" /EC_number="2.7.7.-" /note="synthesizes RNA primers at the replication forks" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="YP_001710281.1" /db_xref="GI:170781949" /db_xref="GeneID:6157367" /translation="MALIRKNDIDEVRSRVNLGDVVGEYVTLKSAGVGSLKGLCPFHD ERTPSFHVRPQVGFYHCFGCGEGGDVYTFLQHMDHVTFAEAVERMAQRIGYQLHYEDG QAATDQGNRSRLLGANEAAAEFFVEQLGSEEAEIGRTFLGERGFDQGAAQRFGVGFAP QSWDALSSHLKAKGYAEAELVTAGLLSQGDRGAYDRFRGRLVWPIRDLTGATVGFGAR RLREDDKGPKYLNTPETPVYHKSSVLYGLDLAKRDVSRGRQVVVVEGYTDVMACHLAG ITTAVATCGTSFGVDHIKVLRRVLGDDSGLGEVVFTFDPDAAGQKAAMRAFSEERRFA AQTYVAVGPEGLDPCDLRLTRGDDAVRRMIQGKKPMFEFAIKQILADHDLETVEGRVA ALRAAAPVVADIRDPSLRPGYARELAGWLGMDLTEVGRAVQTAGRSMPADGADRSGGA PQGRHAQGGHGPDDDGAGDASRSMSLMDLPTDLATRLERDALMAMLQHPELVGNDLVM RAAQVTFVNESLAVVRDGVIGSMDALGGADWLSRVALEVPESFATLVKQLGVAPLPNR GDADKLAVYVKGVTAELVGRDLLRRKADLIGRLQRTDATHERERYQEIQRELMQVEAE RRALRE" misc_feature 1635449..1635745 /gene="dnaG" /locus_tag="CMS_1557" /old_locus_tag="CMS1557" /inference="protein motif:HMMPfam:PF01807" /note="HMMPfam hit to PF01807, Zn-finger, CHC2 type, score 7.9e-47" misc_feature 1636211..1636468 /gene="dnaG" /locus_tag="CMS_1557" /old_locus_tag="CMS1557" /inference="protein motif:HMMPfam:PF01751" /note="HMMPfam hit to PF01751, TOPRIM, score 8.8e-12" gene 1637531..1639186 /locus_tag="CMS_1558" /old_locus_tag="CMS1558" /db_xref="GeneID:6158667" CDS 1637531..1639186 /locus_tag="CMS_1558" /old_locus_tag="CMS1558" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001710282.1" /db_xref="GI:170781950" /db_xref="GeneID:6158667" /translation="MTSAFSRRSRVLLATAGFSAAALVLAGCSGGSGDPLAEDGASGG GSIVVGTTDKVLSLDPAGSYDNGSFAVQNQVYPFLFNSPYGSPDVEPDLAVSGEYTSP NEFTVELKPDLKFANGHALTASDVKYTFDRIATIAANGADNGNGPSSLLANVESVAAP DDTTVVFTLKTANDQTFEQVLSSPAGPIVDEEVFPADKLADPADIVAANAFAGQYVIT DFQLNQLVAYAPNADYQGVLPKPANGGVTARYYADETTMKLAVQNGEIDVVGRSLGAT DIADLKKDDSVQVIDGPGGEIRYITFNLNTQPFGKTTGEADEAKALAVRTAAADLVDR EELSTQVYNGTYTPLYSYVADGLSGANEALKGVYGDGNGGPDADKAAKALSDAGVQTP VALQLQFNPDHYGAGSDDEYALIKQQLEATGLFQVNLQSTIWDQYSKARVNDEYPAYQ LGWFPDCSDADNYLTPFFSPQSFVKNHYDNPTVTDLITQQLSEADSTKRAELIGQIQD DVAADLPTLPLLQGSQVAVAGKDVKGVTLDASFKFRYAPITKG" sig_peptide 1637531..1637623 /locus_tag="CMS_1558" /old_locus_tag="CMS1558" /note="Signal peptide predicted for CMS1558 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.368 between residues 31 and 32" misc_feature 1637582..1637614 /locus_tag="CMS_1558" /old_locus_tag="CMS1558" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1637792..1638955 /locus_tag="CMS_1558" /old_locus_tag="CMS1558" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 1.8e-55" gene 1639333..1640427 /locus_tag="CMS_1559" /old_locus_tag="CMS1559" /db_xref="GeneID:6157368" CDS 1639333..1640427 /locus_tag="CMS_1559" /old_locus_tag="CMS1559" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710283.1" /db_xref="GI:170781951" /db_xref="GeneID:6157368" /translation="MTVIPDAIPASAPPGAQQPKARKQGIGLGQYILIRAVLIIPTVF ILVTLVFFLMRIVGDPISAAVGDRLTPEQLQERLATAGFDRPIIVQYLEYLGQIATGN FGRSLTDNRLISEVLLQYGSATLELVIYSLIVAFLIGIPLGLVAAYYKDRTPDAVLRI LAILAYATPVFFAGLLLKLVFSVWLGILPLSGRADTRVEVALGRLENPTGIYLIDALR LGSPTAVSDVLEHAVLPALALGLLTAGIFLRLVRTNVISTLGTEYVDAARSRGVGEFR LTTRHALKPALIPIITVVGLQIAVMLGGAVLTETTFEWRGLGFQLAQYLAARDFVAVQ GIVALLAVIVAVTNFIVDVVAALIDPRVRY" misc_feature order(1639423..1639491,1639711..1639779,1639816..1639884, 1640026..1640085,1640188..1640256,1640338..1640406) /locus_tag="CMS_1559" /old_locus_tag="CMS1559" /note="6 probable transmembrane helices predicted for CMS1559 by TMHMM2.0 at aa 31-53, 127-149, 162-184,232-251, 286-308 and 336-358" misc_feature 1639693..1640424 /locus_tag="CMS_1559" /old_locus_tag="CMS1559" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.3e-49" gene 1640429..1641403 /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /db_xref="GeneID:6157369" CDS 1640429..1641403 /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710284.1" /db_xref="GI:170781952" /db_xref="GeneID:6157369" /translation="MTATTTSPAPAPARRTLFQRLPLVSHVRQSVGLQRGMLVAGMVI TGIFILLAALAPVIAPFGFAQGRDDSGSFPRQSAPDGTHIWGTTVGGYDVFSRVVWGT QTALSVVVIAVILSLFVGVLLGVVSGYLGGWLDRILVVIADAIYPFPTLLLAIVVSIV LNGGQSSLWGGILSAAVSITVVYIPQYFRVIRAEVVRLKAEAFVESAKVIGTSTPRIM FVHVLRNSTRTLPLILTLNASEAILTLAGLGFLGFGISPTSAAEWGYDLNRALADTAS GVWWTGVFPGVAIVLLVLGLTLVGESVNDISDPKLRARKRADTKKVAA" sig_peptide 1640429..1640620 /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /note="Signal peptide predicted for CMS1560 by SignalP 2.0 HMM (Signal peptide probability 0.867) with cleavage site probability 0.826 between residues 64 and 65" misc_feature order(1640537..1640605,1640750..1640818,1640837..1640905, 1640933..1641001,1641125..1641193,1641260..1641328) /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /note="6 probable transmembrane helices predicted for CMS1560 by TMHMM2.0 at aa 37-59, 108-130, 137-159,169-191, 233-255 and 278-300" misc_feature 1640732..1641367 /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.2e-30" misc_feature 1641014..1641100 /locus_tag="CMS_1560" /old_locus_tag="CMS1560" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 1641400..1643112 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /db_xref="GeneID:6157370" CDS 1641400..1643112 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710285.1" /db_xref="GI:170781953" /db_xref="GeneID:6157370" /translation="MSDVVSIRDLGVTFATDGGDVRAVDGVSLTVSPGEILAIVGESG SGKSVTARTILGLLPDTAVTDGAVLLSDRKGAGAVDVLSISADQLRQARGRDVAMVFQ EPSTALNPVHTVGWQIVEGLRAHGRVSKKEGRAKAIDILRRVGIPDPETRVDHYPHQF SGGQKQRVVIAMALVLDPGLIVADEPTTALDVTVQAEILDLLRRCRDEFGAAVILITH NMGVVADLADRVAVMYRSRLVEQADVATLFASPKEEYTRNLLASVPKLGEGVAATVER AAVRTRARAASATEAAPVVVAKGLEIEYPGRLGSPAFRAVKGVDLRIEAGEVLGLVGE SGSGKTTIGRAIAGLTNVTGGSLRVLGTEMLGVRERDFRTQRADIGFVFQDPATSFNP RLTIAECVAEPLIVHGRARSPQAARARVDELMEAVQLPKAFGDRYPHELSGGQRQRAS LARALALEPSLLVADEPTSALDVSVQARVLELFAELQRELGFAALFISHDLAVVDLLA DRIAVLYRGELVEEGTGAEVLGNPQHPYTQRLLASLPVPDPAEQAERRARLHALRAAE RTAG" misc_feature 1641499..1642107 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.1e-59" misc_feature 1641520..1641543 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1641877..1641921 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /note="PS00211 ABC transporters family signature." misc_feature 1642375..1642950 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 8.1e-63" misc_feature 1642396..1642419 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1642720..1642764 /locus_tag="CMS_1561" /old_locus_tag="CMS1561" /note="PS00211 ABC transporters family signature." gene 1643226..1644161 /locus_tag="CMS_1562" /old_locus_tag="CMS1562" /db_xref="GeneID:6157371" CDS 1643226..1644161 /locus_tag="CMS_1562" /old_locus_tag="CMS1562" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710286.1" /db_xref="GI:170781954" /db_xref="GeneID:6157371" /translation="MTHTPRDADADGGSAEPVLDARDLRLAYPARRGAETPPAVDGIT LRIMPGEVLGVVGASGSGKSSLARVLAGLVPSGDEGAAVPRITGGDASVLGQGLRRMG RRARTRTTYGIGYVPQDAGTTLHPQLTASEAIAEPIFSRDRRFDSQVAARRVVTLLAA LDLPPGTQDRYPHELSSGQRQRVALARALVLGPRLLIADEPTSGVDVMSRVAVLDLLR DLQSRGGFSALIVSHDLAVVERLTDRLAVLHRGTLVGYGAIDDVLADPTHPYVQGLAE SRMAAEPAPDGAGPDVVLRSPEPPARVPHPRRPRT" misc_feature 1643373..1643978 /locus_tag="CMS_1562" /old_locus_tag="CMS1562" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.9e-57" misc_feature 1643394..1643417 /locus_tag="CMS_1562" /old_locus_tag="CMS1562" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1643748..1643792 /locus_tag="CMS_1562" /old_locus_tag="CMS1562" /note="PS00211 ABC transporters family signature." gene 1644272..1645177 /locus_tag="CMS_1563" /old_locus_tag="CMS1563" /db_xref="GeneID:6157372" CDS 1644272..1645177 /locus_tag="CMS_1563" /old_locus_tag="CMS1563" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_001710287.1" /db_xref="GI:170781955" /db_xref="GeneID:6157372" /translation="MLPRTEDAYLEAVRAAGGEVADLSEETRGIVWLSITRAAELTDT LAANPQVQWVQLPFAGVDAFADTLRACDRPDLVWTSAKGAYSEPVAEHALALTLATLR QLPERARATSWGSSAGLSLYRAEVVVVGAGGIALEYIRLLAPFDCTVTVVRRSGDPVE GADRTITADRLDEVLASADVVMLAAASTDDTAGLIGAAQLAAMKDTAVLVNIARGALV DPDALVDALRSGAIHGAGLDVTSPEPLPDGHPLFSEQRCIVTPHTADTPDMVRPLLAE RIRLNTEGFLRTGDFVGIVEPSSGY" misc_feature 1644536..1645057 /locus_tag="CMS_1563" /old_locus_tag="CMS1563" /inference="protein motif:HMMPfam:PF02826" /note="HMMPfam hit to PF02826, D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding, score 2.3e-41" misc_feature 1644878..1644928 /locus_tag="CMS_1563" /old_locus_tag="CMS1563" /note="PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3." gene 1645241..1646272 /locus_tag="CMS_1564" /old_locus_tag="CMS1564" /db_xref="GeneID:6157373" CDS 1645241..1646272 /locus_tag="CMS_1564" /old_locus_tag="CMS1564" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710288.1" /db_xref="GI:170781956" /db_xref="GeneID:6157373" /translation="MMTPEEAAVPEVSMWAGGYTADAGGSGVGITALAVDPITGDLAV VGTAVETPSPSFLLAHGDMVYAVGEAADRVEAFRHGPVGSLQWAGGQPSGGSGPCHLH VVNGVLLTAHYGDGTVAVHPLSGDGTLGEATQLLTAEGSGPRPQQDGPHAHATLHVGG GIVLSADLGTDTVHVHALHDGRLDRIGAVALPAGTGPRHMALLSSGRVLLVGELDGTL HALEGQGATWRVAWSTVCASETDARDSAAEVQVSADERLAYVGLRGSDRIAVVGIAVD GALTPVAAFDCGGATPRHHAIVDDRLHVANQGSGTVASFRLDPATGLPTAAPAVIAVP TPTYLLPIG" gene complement(1646292..1646681) /locus_tag="CMS_1565" /old_locus_tag="CMS1565" /db_xref="GeneID:6157374" CDS complement(1646292..1646681) /locus_tag="CMS_1565" /old_locus_tag="CMS1565" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710289.1" /db_xref="GI:170781957" /db_xref="GeneID:6157374" /translation="MFQVVQARPHDADRLWALLEEDHRERATVTGDPDEAASHDVDPV DDALAARPGDPADGTLPLLESRRGRVVALVSDPARPVLIAYSGIRAVGFALMDRNGVG GRAFTSAGWRGLGVEEEIRAAASLLLR" gene 1646794..1646982 /locus_tag="CMS_1566" /old_locus_tag="CMS1566" /db_xref="GeneID:6157375" CDS 1646794..1646982 /locus_tag="CMS_1566" /old_locus_tag="CMS1566" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710290.1" /db_xref="GI:170781958" /db_xref="GeneID:6157375" /translation="MNDVSITRIAGDDVLSAPQGPGTNALVHNPFAVEAIAGDDVLSA PQGPGTNALVHNPFALQH" gene 1647083..1648033 /locus_tag="CMS_1567" /old_locus_tag="CMS1567" /db_xref="GeneID:6157376" CDS 1647083..1648033 /locus_tag="CMS_1567" /old_locus_tag="CMS1567" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710291.1" /db_xref="GI:170781959" /db_xref="GeneID:6157376" /translation="MLHLAPHHRLYRVAVDEWRHVTPALEFHRVSGPDALVAEVVARL AAGGVTDPDDPAAGEDAGAPLVRLLRDRGALIARRADRPRPLPGTGMVAVQGTGPVAD ALHALLGESSVALAPDDDVPATASALVSVAPEQPDAAWTTLGGELARTGLPWHRVHQE GELLVVGPLQAPGGEGAVTYADYRGRRRAAHRVVEELDRLWREADARAAAGIAPPDAW HGVGTGAAAAAAGIVIHELAEHLSRTTGGRREEAHAGGEEHATGPAIRYEHTVVVASG LVERHPVLPLPVDLAGPPASAASPTSAPLGAAHPTAPGER" gene 1648030..1649649 /locus_tag="CMS_1568" /old_locus_tag="CMS1568" /db_xref="GeneID:6157377" CDS 1648030..1649649 /locus_tag="CMS_1568" /old_locus_tag="CMS1568" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710292.1" /db_xref="GI:170781960" /db_xref="GeneID:6157377" /translation="MTGHDRFGVPLRASDGAVLVHDAHVPHTAGPGARVPCVVTRTPY GRSRHLAEGRGWRERGWAFVVQDVRGRHDSDGTWAPYRGERADGAALVDWVTAQPWSD GRVIAHGGSYSGYTAWAMAVERPSAVRAVVSLGPSMSLARTKFGGGGILRLAEHASWW LERGDSRTSRDGLAALVFRERPGLLRHLPVVDLPREMGAHLPSWAGIVDDGAGARTGE EITRAELAALTAATLHVGGWHDLLLPETLEHHGVAGSDVPGTPSHLLVGPWEHDLVGS GSGRVGDLDHGDDAVIPWGRMLVDWIRDALDGTLAARRARVHVRGSGWEDHDAWPPPH TPTRVAWTTGGALAFVHDPRDPRPSRHPGVDRRALASRPDAVRAVTRPLDAPLRLTGD VAVELTSGSDAPGTDWIARLLARDRDGAEQELAVGEATVAGPHEGVRIGIPLGPVAAL LPAGTVLVLELAGADAPRLARNLGGPPGERCTSTTQSPVRQRVILGAASPLTLVLPIA AGTAPTPDGGRAGGEPADAVGPADPTSGSAS" misc_feature 1648072..1649514 /locus_tag="CMS_1568" /old_locus_tag="CMS1568" /inference="protein motif:HMMPfam:PF02129" /note="HMMPfam hit to PF02129, Peptidase S15, score 2.6e-33" gene 1649646..1651022 /locus_tag="CMS_1569" /old_locus_tag="CMS1569" /db_xref="GeneID:6157378" CDS 1649646..1651022 /locus_tag="CMS_1569" /old_locus_tag="CMS1569" /note="Similar to downstream CDS, some similarity to C-terminal portion of other hypotheticals" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710293.1" /db_xref="GI:170781961" /db_xref="GeneID:6157378" /translation="MSVADLVDARTGLITSLARQPVDPRLPFAWVGHGATVSRADRFA PWRADGFGFGASAGDPVPARLAACGEAVERYCGNAVPERLVRGSHASLTAGGARAVDP EELALYSPAQHAAPGFPFQPSTRHDEVLWAHGVDLHDGGPVLVPASLAWLDFVHGSRA REVPRHSLAYSGIAAGSDRRMAVRNAVEELWERDASVIWWASGASTRALDDGGRITGA LGWPDDPTTPAVRVRLLEVPSESPAPVVAAFLEEEHDDGSRMVAFGSACRSTPEHAAT KALVEALGLLQLTRQLVDPTSEVWRAVRAGGIEEHVFLPYRADRRYLDDAGPDYARLT DLPPVAQLHLDPRMNGAHLDRLRPTASAPLESLRRIDAADPLDAHLEALARLGLRAVS VDLTTPDVRLAGLEVVRVVVPGLVGNGPPAYPLRGSDRYLDVPRRLGFDRIPASADDL VPDPIPLA" gene 1651019..1652437 /locus_tag="CMS_1570" /old_locus_tag="CMS1570" /db_xref="GeneID:6157379" CDS 1651019..1652437 /locus_tag="CMS_1570" /old_locus_tag="CMS1570" /note="Similar to upstream CDS, some similarity to C-terminal portion of other hypotheticals" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710294.1" /db_xref="GI:170781962" /db_xref="GeneID:6157379" /translation="MRGPMDPAPAPASARPTDLRPAGLAPAHLAPTDLRPADLAPADL VDARTGVVRRIEPRATPAHFPPAFQLAHAVLADSTAFCPWASDASGAGHSFADPDAVL GAAVGEAVERYCGNLVPAGLVRSSARRLRAAGRPVLGPTALALYSAAQHASGLLPVAV LDDDAVVDWTEAERLGTGERLLVPASLVWVAHALLVPPAMHPIMQAGLATGRTADEAL WGGLGEVIERDAMTRAWTDGDGLVELEVPRALHDLARGPADALSCRWFLFPHASGLPI VGALLADARTGYLTLGMASGGLPRRAARKALGEALQLQLFQADLDDPAGPYMAAARDP RSPLKPWRADRAYRRSYRPDLADVVDYGCHLQLHLDPGVQRAFHEELERSITNRLPLD DVSGRWDGPHRLGELVEELRAQGREVLAVDVTLPEIRRAGLHVTRVIVPGLRSNAPHA LPFLGGPDPAPPRPARPVPLPH" misc_feature 1651436..1651591 /locus_tag="CMS_1570" /old_locus_tag="CMS1570" /inference="protein motif:HMMPfam:PF00018" /note="HMMPfam hit to PF00018, SH3, score 0.15" gene 1652611..1653639 /locus_tag="CMS_1571" /old_locus_tag="CMS1571" /db_xref="GeneID:6157380" CDS 1652611..1653639 /locus_tag="CMS_1571" /old_locus_tag="CMS1571" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710295.1" /db_xref="GI:170781963" /db_xref="GeneID:6157380" /translation="MRRVLVPALVIAAPLVLAVAMGIGSVSVSPLHVAQVVLHHAVGA DVGAGIDPIDDQIVWEYRAPRVLLALVTGAALALAGTVLQTLIRNPLADPFVLGIASG ASLGAVATLVVGASAAGFLATLGVTGAAFAGAIGTLALVLALGRRGGRVDPARLVLVG VSISSLLQALTSWLQLQASPDQIAGVLFWLLGSVSGATWSSLALPAAALAIGLVGLLA GGRTLDALLLGDDRAASLGVDLSRSRTILFAVSALLTAAAVSVVGGVGFVGLIAPHLV RLVVGPAHRRLLPLAALVGGLFLVLADLAGRTLTAPRELPLSIVTALVGVPVFLAVLL RADGGRTR" sig_peptide 1652611..1652694 /locus_tag="CMS_1571" /old_locus_tag="CMS1571" /note="Signal peptide predicted for CMS1571 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.466 between residues 28 and 29" misc_feature order(1652623..1652691,1652806..1652874,1652893..1652961, 1652974..1653042,1653076..1653144,1653202..1653270, 1653346..1653414,1653457..1653516,1653553..1653612) /locus_tag="CMS_1571" /old_locus_tag="CMS1571" /note="9 probable transmembrane helices predicted for CMS1571 by TMHMM2.0 at aa 5-27, 66-88, 95-117, 122-144,156-178, 198-220, 246-268, 283-302 and 315-334" misc_feature 1652680..1653615 /locus_tag="CMS_1571" /old_locus_tag="CMS1571" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 5.2e-107" gene 1653636..1654430 /locus_tag="CMS_1572" /old_locus_tag="CMS1572" /db_xref="GeneID:6157381" CDS 1653636..1654430 /locus_tag="CMS_1572" /old_locus_tag="CMS1572" /codon_start=1 /transl_table=11 /product="putative ATP-binding ABC transport protein" /protein_id="YP_001710296.1" /db_xref="GI:170781964" /db_xref="GeneID:6157381" /translation="MRLSIEDVAVRIGRATPVTSATLEAGDGELVGLVGPNGSGKSTL LKALYRALPVAHGTVLLGDRDLRGMRPRDSARILAALTQDHGDDGALDVRAVVATGLT PHKGALDRDTDDDRALDDACLARTGATALADRAVRSLSGGERQRVMLAAALAQRPRIL VLDEPTNHLDVATQLELLDLVRGLGVTVVVALHDLNLAAAYCDRIHVVHHGRIVAGGT PDEVLRPGILRDVFGVDVHLGEHPVTGRRHLFFSTPTTTPTQDGRP" misc_feature 1653717..1654268 /locus_tag="CMS_1572" /old_locus_tag="CMS1572" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.6e-56" misc_feature 1653738..1653761 /locus_tag="CMS_1572" /old_locus_tag="CMS1572" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1654050..1654094 /locus_tag="CMS_1572" /old_locus_tag="CMS1572" /note="PS00211 ABC transporters family signature." gene 1654427..1655437 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /db_xref="GeneID:6157382" CDS 1654427..1655437 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001710297.1" /db_xref="GI:170781965" /db_xref="GeneID:6157382" /translation="MTPRTRAHHRTTTRILALAAGATAAALLLAGCTAAPADGDATPA AAPAAGPVSVDSCDRTLAFPAGPQRIVSLWPAVTEMLLELGAGDRIVGQAFTDQSPPL DRYRDAYDRVPVLATGAVDRETLLAAHPDLIVADGEYHFDGTELPTIDDLAALGIRVY VISSFCHGQVTTGHVDDAATDLQSLGTLLGAGEAADRAVADERSQLAAVDARVQGRDP VDLAVLQVFDGSVYADARGLYSDVVTRAGGRNMYENALPADQYYAEVSVEDVAKRDPA TIVYLYSTDAERDSVRADLQARLPGVRAVRDGRLLALPSTDFIGSRAVDGVVALDALL HG" sig_peptide 1654427..1654588 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /note="Signal peptide predicted for CMS1573 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.637 between residues 54 and 55" misc_feature 1654463..1654531 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /note="1 probable transmembrane helix predicted for CMS1573 by TMHMM2.0 at aa 13-35" misc_feature 1654490..1654522 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1654625..1655377 /locus_tag="CMS_1573" /old_locus_tag="CMS1573" /inference="protein motif:HMMPfam:PF01497" /note="HMMPfam hit to PF01497, Periplasmic binding protein, score 5.7e-12" gene 1655430..1656713 /locus_tag="CMS_1574" /old_locus_tag="CMS1574" /db_xref="GeneID:6157383" CDS 1655430..1656713 /locus_tag="CMS_1574" /old_locus_tag="CMS1574" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710298.1" /db_xref="GI:170781966" /db_xref="GeneID:6157383" /translation="MADAAAADGAQAAGSPRAFDLYVVSRCVSWAGNALTAVALPVLV YSTTGDPALLGLVAMMEALPYLVLALPVGALVDGWDARRTMLVTTWLSAAATASVPLA ALAGTPHPALLVGVAAAVSSLFVFFDAASFSAVPALVGRDRVGAATTRMTTAYTVIGI AGPLAGAPAVAGLGAPAVLALDAASYAAAAVLMTRVTWTPPARAAATTRRRIGREILE GLQHIRRAPLVRDLTLVGAGSSLTGGAVTGTLVVMIARGLDERADGPALGILAAAAAC GTLVASRALDPIQRRLGVGAIAIGALALQVALTAAWSAVASLVVAVLVLAAWQAATST VALSGIVVRQTVTPAHLQGRVNTTARMIAWGGQPIGAGLGGVLAASVGIRAAVLLTGL GAVASLAGAAASSLRRAPRLADLPVPDARDAPVAR" misc_feature order(1655490..1655558,1655586..1655654,1655688..1655747, 1655775..1655843,1655880..1655948,1655958..1656026, 1656129..1656197,1656225..1656284,1656303..1656371, 1656384..1656452,1656510..1656578,1656588..1656647) /locus_tag="CMS_1574" /old_locus_tag="CMS1574" /note="12 probable transmembrane helices predicted for CMS1574 by TMHMM2.0 at aa 21-43, 53-75, 87-106, 116-138,151-173, 177-199, 234-256, 266-285, 292-314, 319-341,361-383 and 387-406" misc_feature 1655493..1656566 /locus_tag="CMS_1574" /old_locus_tag="CMS1574" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1656811..1657773 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /db_xref="GeneID:6157384" CDS 1656811..1657773 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /note="N/I" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710299.1" /db_xref="GI:170781967" /db_xref="GeneID:6157384" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1656883..1656948 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1656948..1657069 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1657069..1657134 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1657219..1657761 /locus_tag="CMS_1575" /old_locus_tag="CMS1575" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 1657841..1657913 /locus_tag="CMS_r014" /old_locus_tag="CMSr014" /db_xref="GeneID:6157385" tRNA 1657841..1657913 /locus_tag="CMS_r014" /old_locus_tag="CMSr014" /product="tRNA-Asn" /db_xref="GeneID:6157385" gene complement(1658019..1658585) /gene="def" /locus_tag="CMS_1576" /old_locus_tag="CMS1576" /db_xref="GeneID:6159033" CDS complement(1658019..1658585) /gene="def" /locus_tag="CMS_1576" /old_locus_tag="CMS1576" /EC_number="3.5.1.88" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="YP_001710300.1" /db_xref="GI:170781968" /db_xref="GeneID:6159033" /translation="MAVLPIRITGDPVLHAPARDVQAFDDDLRSLVADMYETMDEAPG VGLAAPQVGVPLRVFVYSYETDDGEPLRGVAVNPDLFITPVAVREADEDTEEEGCLSF PGERFPLVRADRAILRAVDLDGRPYEIEAAGWFARILQHEYDHLDGLLYTDRLAHEHR KPVAKVIRKSGWGVPGNSWLPGRDHLED" misc_feature complement(1658103..1658579) /gene="def" /locus_tag="CMS_1576" /old_locus_tag="CMS1576" /inference="protein motif:HMMPfam:PF01327" /note="HMMPfam hit to PF01327, Formylmethionine deformylase, score 5.2e-59" gene 1658625..1659536 /locus_tag="CMS_1577" /old_locus_tag="CMS1577" /db_xref="GeneID:6158660" CDS 1658625..1659536 /locus_tag="CMS_1577" /old_locus_tag="CMS1577" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710301.1" /db_xref="GI:170781969" /db_xref="GeneID:6158660" /translation="MPFDASPVLQAASLTPYQALGIPIALVGAVFLSLGAQLQSQGVA KMEARGKKSTSGLSLRQLGALLGRPSWVAGTVMLGLAIVFQLASLRLAPLIVVQPLGA VALVVTAILNSRATGKRLDLKAKRAVALCIGGVGLFVVFAAVFAKETPIRTPELITIL VILAIVLALLGGLFLYFRRHVRAIFYIISAGVLYGFVATLAKVVINRLTTGDFDVLTA VCIVALVAATLLGAYFVQTAYSSGPPDLVIAGLTVVDPLVAVCIGVTVLGEAADAPLY AGVAFLVAGAVAVTGVFQLAKHHPHAS" misc_feature order(1658667..1658732,1658808..1658876,1658889..1658957, 1658994..1659062,1659090..1659158,1659171..1659239, 1659267..1659326,1659360..1659428,1659441..1659509) /locus_tag="CMS_1577" /old_locus_tag="CMS1577" /note="9 probable transmembrane helices predicted for CMS1577 by TMHMM2.0 at aa 15-36, 62-84, 89-111, 124-146,156-178, 183-205, 215-234, 246-268 and 273-295" gene 1659705..1660964 /locus_tag="CMS_1578" /old_locus_tag="CMS1578" /db_xref="GeneID:6157386" CDS 1659705..1660964 /locus_tag="CMS_1578" /old_locus_tag="CMS1578" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710302.1" /db_xref="GI:170781970" /db_xref="GeneID:6157386" /translation="MPNTSGQTPREPMTSGRPLRILIGADTFPPDVNGAARFAERLAG GLVRRGHEVHIVAPAASRKHGTWTEIHDGQEMTAHRLRSYRWYPHDWLRFAQPWSVNR DSARILDAVQPDVVHFQSHILTGRGLSIEAEKRGIRIIGTNHFMPENMLQHTLLPVAW QDKAISMAWKAARRTFGRAEAVTTPTRRAAQFLEKYTGLQGVIAISCGIDAGNYTPDF SPRTRNRIVFVGRVTGEKHIDVLLRAFAILPASLDAELEIVGGGDQKTALEKLAVDLR IADRTTFAGYVTDEELRRAYTRATVLAMPSIAELQSIVTMEAMASALPVVAADAMALP HLVHDGENGYLFRPGDVDDLATKLQRVLELPEEELQRMKRESLAVVATHDIERTISTF ESLYRGESVDAPVTDEARGHADGSGSV" misc_feature 1660335..1660841 /locus_tag="CMS_1578" /old_locus_tag="CMS1578" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 1.7e-39" gene 1660977..1661050 /locus_tag="CMS_r026" /old_locus_tag="CMSr026" /db_xref="GeneID:6157387" tRNA 1660977..1661050 /locus_tag="CMS_r026" /old_locus_tag="CMSr026" /product="tRNA-Met" /db_xref="GeneID:6157387" gene 1661058..1663493 /locus_tag="CMS_1579" /old_locus_tag="CMS1579" /db_xref="GeneID:6159052" CDS 1661058..1663493 /locus_tag="CMS_1579" /old_locus_tag="CMS1579" /codon_start=1 /transl_table=11 /product="putative acyltransferase" /protein_id="YP_001710303.1" /db_xref="GI:170781971" /db_xref="GeneID:6159052" /translation="MVPRPATASRDHGTERTPRTGVRRRHSTTPCGPPRRCPLDYHGY RNHPGRGGPEGDRRPPPATRRRGASARVGPAATREDLMTSTRPTRTSRSTTVAPEGSS TKSFRGDIQGLRALAVISVILDHLLAWPSGGFLGVDVFFVISGFIITSLLLRQHDKLG RISFADFYRKRVKRILPASTAVLLVTVLASWMVFLSGRASAIAWDSVAAFFFVANWRF AATDTDYWAADSAVSPVQHYWSLGVEEQFYVVWPILLTLGLALSLRFRGPGRYRGILT AILLIVTIGSFAWAMADTAGNAAIAYFSTLSRAWELGIGALLAVATPLLRRIPDAARP VIAWAGLAVIAYGLFALSSASPIPAPGSAIPVVGAALVIAGGTGGAQRFLWPLTNPVS RYLGDISYSLYLWHFPVIVILAAVADTADLGYPVIVLVLTLGLSVLSYHGLEDPIRRS HWLEPGAAARRKKRRARRRPGLGASTGTKVAALGTAALLTVTFISLAVVRQQEIQEAS RLAPGPAASGEEDPTDPAVLAAGDLGALQGQIRDALAATSWPALDPAIDGLEKSAVPV EDGQGCGRTDVDNPRSCSFGDSRKPTIMVLGDSTSITLLPTVRAMFEATHHIRGLTFA GCAVMDVEWDFPDASTKSGCLDFRTQAIAAIQEEKPEILFVSNSYGQILKLASKATGD DAVAEWSEGVQSTVGQVRDSVGKVVLVSSPPTGQPLETCATKVSTPADCQASIPGAWK VGDRAQQDAATALGIAYLDTSSLFCWEETCPSFVGSTPTKRDSVHTTPQYAAVITPAF RQMLDEALAGVPA" misc_feature 1661376..1662407 /locus_tag="CMS_1579" /old_locus_tag="CMS1579" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 5.6e-68" misc_feature order(1661451..1661519,1661580..1661648,1661796..1661852, 1661871..1661930,1661973..1662041,1662060..1662128, 1662144..1662212,1662249..1662308,1662318..1662386, 1662468..1662536) /locus_tag="CMS_1579" /old_locus_tag="CMS1579" /note="10 probable transmembrane helices predicted for CMS1579 by TMHMM2.0 at aa 132-154, 175-197, 247-265,272-291, 306-328, 335-357, 363-385, 398-417, 421-443 and 471-493" gene complement(1663599..1664603) /gene="fcl" /locus_tag="CMS_1580" /old_locus_tag="CMS1580" /db_xref="GeneID:6157388" CDS complement(1663599..1664603) /gene="fcl" /locus_tag="CMS_1580" /old_locus_tag="CMS1580" /EC_number="1.1.1.271" /codon_start=1 /transl_table=11 /product="GDP-l-fucose synthetase" /protein_id="YP_001710304.1" /db_xref="GI:170781972" /db_xref="GeneID:6157388" /translation="MSAAPASAADERDAVAFTPAPLDRSARVYVAGHRGLVGSAIVRR LEAEGFTDVVGRTSAELDLKDRDAVFAFFAAEEPVHVVLAAAKVGGILANSTYPVDFL SDNLRIQVNVLDAALAHGVDRLLFLGSSCIYPKLAPQPITEDSLLTGHLEPTNDAYAI AKIAGIMQIQAVRRQYGLPWLSAMPTNLYGPGDNFSPQGSHVLPALIRRYDEARASGA ESVTNWGTGTPRREFLHVDDMAAACLHLLEHYDGPEQVNVGTGTDVTIREIAETIARV VGYEGRTEWDTSKPDGTPQKLLDVSKLADAGWTSSIGLDEGLRSTVAWYREHIETLRE" gene complement(1664600..1665652) /gene="gmd" /locus_tag="CMS_1581" /old_locus_tag="CMS1581" /db_xref="GeneID:6158686" CDS complement(1664600..1665652) /gene="gmd" /locus_tag="CMS_1581" /old_locus_tag="CMS1581" /EC_number="4.2.1.47" /codon_start=1 /transl_table=11 /product="GDP-mannose 4,6-dehydratase" /protein_id="YP_001710305.1" /db_xref="GI:170781973" /db_xref="GeneID:6158686" /translation="MAKKAFITGITGQDGSYLAELLLAKGYEVHGLIRRSSTFNTSRI DHLYQDPHEDGAKLFLHYGDLSDGSRLTTLMMQIQPDEVYNLAAQSHVRVSFDEPEHT ADTTGTGTIRLLEAVRLSGIETRFYQASSSELYGATPPPQSETTPFYPRSPYGAAKLY SFWITKNYREAYDMFAVNGILFNHESPRRGETFVTRKITRAVAAIKAGKQDHVYLGNL DSIRDWGYAAEYVEGMWRMLQADEPDDFVLATGGNFTVRDFLETAFSHAGLDWSDHVR FDPRYLRPTEVDALVGDATKAHEKLGWKATVDTTMLARIMVDADIAALEAEGRPWIDT VRLASWGTADATAVEA" misc_feature complement(1664693..1665640) /gene="gmd" /locus_tag="CMS_1581" /old_locus_tag="CMS1581" /inference="protein motif:HMMPfam:PF01370" /note="HMMPfam hit to PF01370, NAD-dependent epimerase/dehydratase, score 2.2e-13" misc_feature complement(1665146..1665232) /gene="gmd" /locus_tag="CMS_1581" /old_locus_tag="CMS1581" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 1665823..1667109 /gene="wcaI" /locus_tag="CMS_1582" /old_locus_tag="CMS1582" /db_xref="GeneID:6158730" CDS 1665823..1667109 /gene="wcaI" /locus_tag="CMS_1582" /old_locus_tag="CMS1582" /codon_start=1 /transl_table=11 /product="putative surface polysaccharide biosynthesis glycosyl transferase" /protein_id="YP_001710306.1" /db_xref="GI:170781974" /db_xref="GeneID:6158730" /translation="MGELSTTDAARTQTADLGGLTVCLVGINYWPETTGIAPYTTAMA EALTDAGASVHVVTGIPHYPQWKLQDERYAEGRRWEEMRDGVRITRVRHTIPETPDLA GRAKLEASFLRGALREVRRDTSEVVIAVTPSLAGLAAGALGRGRRPFGVLVQDLTGNA AGESGTTGGRASRLIATGEYALLRRADRIGVITPRFGDLLIQQGLPDAAISGLPNFTH IRPVDVSTAAARTRLGWTRDAFTVVHTGNMGMKQGLESVVEAARLSDARDLGIEFVLV GDGNQRAALEAQGAGIRSLRFVPPLDGDDYPYALAAADALLLNEKPGVREMSMPSKLT SYTSSRRPIIAAVEDGGITESVVREHGAAAIIPPGDPERLLQAAQDLRCDTDAAEVLT TAAQRMYQNRYSPVSAHARYVRFAQSLSTLGAGVRA" misc_feature 1666498..1667016 /gene="wcaI" /locus_tag="CMS_1582" /old_locus_tag="CMS1582" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 0.00023" gene 1667106..1667687 /gene="wcaF" /locus_tag="CMS_1583" /old_locus_tag="CMS1583" /db_xref="GeneID:6159094" CDS 1667106..1667687 /gene="wcaF" /locus_tag="CMS_1583" /old_locus_tag="CMS1583" /EC_number="2.3.1.-" /codon_start=1 /transl_table=11 /product="putative surface polysaccharide biosynthesis acetyl transferase" /protein_id="YP_001710307.1" /db_xref="GI:170781975" /db_xref="GeneID:6159094" /translation="MTAAPDHSTDVPVIDLSLAPGEHQAWDRPKRTVYLWAVVELLLV TNPWQISSSLRVRALRAFGAEIGDGVVFRPRTRVKFPWKLRIGDRSWIGEGVWFHNQD HITVGHDVVLSQETMLTTGSHAHRRDMALITRPIVIEPGAWITSRCLVLGGAHVGRSA LARPMTVVAGDVPADAIVSGADCAVVGSRFRAS" gene 1667684..1668808 /locus_tag="CMS_1584" /old_locus_tag="CMS1584" /db_xref="GeneID:6159093" CDS 1667684..1668808 /locus_tag="CMS_1584" /old_locus_tag="CMS1584" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710308.1" /db_xref="GI:170781976" /db_xref="GeneID:6159093" /translation="MTRRLRIAHVLPFVSEDGAFGGPVAVAVEQCRELARQGHGVVLV VGWDGEVDLGVDGVDVRLFRAHAIPGLGFSGLVSPAMIAGLRRHVREFDVVHIHLGRH LLALAAAEVCRRAGVPYVLQTHGMVTADARPKSRILDAVAVRRVLAGARAVLALTDAE EEALGVVSRSGAHVVRIRNGVAPVSVERHRDPDAVPEVLFLARLHPRKRVLAFAEMAA LLHERGLRARFTVIGPDEGDLPALTDFIAARPGLPLVHEGSIAPGASSERLAAADVYV LPSVREVFPMTVLESLAVGTPVVLTDDCGISTELRDAGAALVTAGAPSDLSDAVEAIL GASTLRRSLSEGMRRSLDHDFGIAAVVSTLLPAYADRSTP" misc_feature 1668227..1668733 /locus_tag="CMS_1584" /old_locus_tag="CMS1584" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 1.8e-16" gene 1668805..1670325 /gene="rfc" /locus_tag="CMS_1585" /old_locus_tag="CMS1585" /gene_synonym="wzy" /db_xref="GeneID:6157389" CDS 1668805..1670325 /gene="rfc" /locus_tag="CMS_1585" /old_locus_tag="CMS1585" /gene_synonym="wzy" /note="OrderedLocusNames=STM1332" /codon_start=1 /transl_table=11 /product="putative polysaccharide polymerase" /protein_id="YP_001710309.1" /db_xref="GI:170781977" /db_xref="GeneID:6157389" /translation="MTETPSRRPAVAPPRSSTSGPMVAGSAASTASSLTATLLIIAFC GFVPLAVFATVPYPTDRAVPLEVAGALLILLISGTRLAIVIGSGRQTLFTFAFWLFAY AFIAVPAFAQMLTRRFPGTTPNIEVEYDLTALGVVLVGLGAAMFGALIARRVRPHRSD QQMRAAALPRWSLSRNRIVILAVIGFAAWAYFVGRLGPATFFSSRDEMAAARSMAFSD PATSTIVASVATLPLLVCVHAMTRFRRAQPRATGTARDFTLMLPAALLAVLFAINVVT SSRYLFGTMAFSLLVLFGGFATRRRARLSMGALVFLLLAAFPLFSIFRRATASTTSQL GAAAFVNSGDYDSFAQIINSVNYVADEGVLWGTQLLGPFVFWVPRAVWPDKPIDTGVM LAQFRGYNFENLSAPFWSEAFLSGGWAGVVVLFLLLGYVLKRADARSGASLDKAGVFG ITTAILSFYMLILLRGSLLQATSTLAVILVSILVVARRDAIKPTAASGSGTRRPIS" sig_peptide 1668805..1668963 /gene="rfc" /locus_tag="CMS_1585" /old_locus_tag="CMS1585" /gene_synonym="wzy" /note="Signal peptide predicted for CMS1585 by SignalP 2.0 HMM (Signal peptide probability 0.979) with cleavage site probability 0.828 between residues 53 and 54" misc_feature order(1668895..1668963,1668991..1669059,1669078..1669146, 1669189..1669257,1669336..1669404,1669447..1669515, 1669573..1669632,1669642..1669695,1669714..1669773, 1670041..1670100,1670137..1670196,1670206..1670259) /gene="rfc" /locus_tag="CMS_1585" /old_locus_tag="CMS1585" /gene_synonym="wzy" /note="12 probable transmembrane helices predicted for CMS1585 by TMHMM2.0 at aa 31-53, 63-85, 92-114, 129-151,178-200, 215-237, 257-276, 280-297, 304-323, 413-432,445-464 and 468-485" gene complement(1670820..1671215) /locus_tag="CMS_1586" /old_locus_tag="CMS1586" /db_xref="GeneID:6158929" CDS complement(1670820..1671215) /locus_tag="CMS_1586" /old_locus_tag="CMS1586" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710310.1" /db_xref="GI:170781978" /db_xref="GeneID:6158929" /translation="MSRVDLAPSRRDVLARALPSEWDIDRGRDEDERLRVSRFGIVLV RTSEQYEDVIALGGQPVIIHRQFSVTDSRGSLRLRLGALLEPWRWRRTLLNEGVSDLV VSRGGPRSTFVLAARLASVGVLASPVKTA" gene complement(1671212..1672150) /locus_tag="CMS_1587" /old_locus_tag="CMS1587" /db_xref="GeneID:6157390" CDS complement(1671212..1672150) /locus_tag="CMS_1587" /old_locus_tag="CMS1587" /note="Homologues in surface polysaccharide gene clusters." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710311.1" /db_xref="GI:170781979" /db_xref="GeneID:6157390" /translation="MTVVVVDPGMASTNLGDQIISDAVNRQFIGRLGDRHGDVTVIPM HGPLTDTSRDALRKADEVVVCGTNLLSDHMRFRTSWEWPRDDIQLTKGKLTVFGAGWW QYQLAGIDPVSARWMRALSGGRTWAVRDEYSARRLQAAGISAVHLSCPTLWDVDTQTL PAEQERVIVTLTDYNQDPLADKRLVDLLAERFEVLFWPQGPGDRRYIEQLVGPGASFV DASLSAFDAALDEPGTAYVGLRLHGGIRAMQRGVPSLILAIDNRAREISRSVGLHAPS RNSFRDIEASLTPGRVVEIALPTEAISAWTADWKLS" gene complement(1672174..1673274) /locus_tag="CMS_1588" /old_locus_tag="CMS1588" /db_xref="GeneID:6157391" CDS complement(1672174..1673274) /locus_tag="CMS_1588" /old_locus_tag="CMS1588" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710312.1" /db_xref="GI:170781980" /db_xref="GeneID:6157391" /translation="MRMTRIHHYYARYLEHPSGVTDSIDHWARAAADAGWDARILCAE PPAGRGHRQPSPLTRSIAHLGRGRGSYVPLGLLRELRLGDLLVIHEGWVLSNVVAALV AKLCGARLVVMPHGVYERQIVENQRDVLGLRRHLDRLVLRMADAVHVFYAGEQDVVRA IEPRISCFVTVPNGADPVPDGEAWRGGGDHFLWIGRFDVLHKGLDNLVDAWARLPEPR PRLVLAGPDFRGGRARIAASVAAQGLTGSVELRSHVGGTEKNELLTTCRAYIHPSRWE SCSIMLLEALAAGVPSLISRSIHAADELGDEGILGVVDLVAAEGELASALERVDGDWE LGRRARSWASSVGTWDAVGRRAVDEYRRHAIN" misc_feature complement(1672249..1672752) /locus_tag="CMS_1588" /old_locus_tag="CMS1588" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 4.9e-09" gene complement(1673337..1674536) /gene="wzx" /locus_tag="CMS_1589" /old_locus_tag="CMS1589" /db_xref="GeneID:6157392" CDS complement(1673337..1674536) /gene="wzx" /locus_tag="CMS_1589" /old_locus_tag="CMS1589" /codon_start=1 /transl_table=11 /product="putative surface polysaccharide flippase" /protein_id="YP_001710313.1" /db_xref="GI:170781981" /db_xref="GeneID:6157392" /translation="MQFAWVSGGKILAALIQAATMLLLVREVSPAEFGFFSAAYGVIT IPQTLLDLGLPSLIVRERARDARDGIVTRALKLNNVLSLAMSLLLLVMGILLAMTVDP DYWLLLPFAVWAAAERNADAWLGVVLADGDSWINVTNLVLRRLGSLVIFVLLTRFSPM EPVLALAVGFAVGALLSWLFAHVFVAKRLVPGTPATVRALVRMSYPYWIDSVASQARN LDVAITSIVAGQAQAGFYAASARLTNPLRILPNSLATILLPAASKRDSSNIGGLLKLV VAATAGFALLYGGGAVVVPWAVPVFLGPEYSGAIVALQITCVGLVFASAASLLSTLLL AVGRKHFVAGTAVVSTIACLLGVALGALTMGAVGAALGLAASYAVQAVVLFFRLLMFI IRRESNS" misc_feature complement(order(1673370..1673438,1673448..1673516, 1673535..1673603,1673646..1673714,1673982..1674050, 1674237..1674305,1674366..1674434,1674462..1674530)) /gene="wzx" /locus_tag="CMS_1589" /old_locus_tag="CMS1589" /note="8 probable transmembrane helices predicted for CMS1589 by TMHMM2.0 at aa 3-25, 35-57, 78-100, 163-185,275-297, 312-334, 341-363 and 367-389" misc_feature complement(1673742..1674533) /gene="wzx" /locus_tag="CMS_1589" /old_locus_tag="CMS1589" /inference="protein motif:HMMPfam:PF01943" /note="HMMPfam hit to PF01943, Polysaccharide biosynthesis protein, score 1.4e-15" gene complement(1674632..1676221) /locus_tag="CMS_1590" /old_locus_tag="CMS1590" /db_xref="GeneID:6159095" CDS complement(1674632..1676221) /locus_tag="CMS_1590" /old_locus_tag="CMS1590" /note="responsible for linkage of the initial sugar to the lipid carrier in surface polysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="putative initial glycosyl transferase" /protein_id="YP_001710314.1" /db_xref="GI:170781982" /db_xref="GeneID:6159095" /translation="MHHRLGGTMIEQKATHDADARETGTRRSMTDRAAKGVRADAGPL TEADGLRAHDWRRTYAIGLVVTDLLVLVWVVFGVQIAWFGFETSDVAFNGDYEGVAVS YSLISLVIIASWMVALGLYGTRGYRVLGTGPQEYRLILDATVRLFGLLAIVAFLGRID FARGYIIIALPLGLVTLVLSRWMWRQWLNVQRAKGRYSSRVLLIGSEASTGFLARELA RQPYAGYHVVGACIPSGVIAATLPGTGIPVLGKLDDLQAAMRAVDADTIVIASNDELS PERIRELSWSLEPGRQHLVVAPSLTDIGGPRIHTRPVAGLPLIHVETPRYEGTKLFAK RAFDIVASTLILVVASPLFLAIAITIRLSTPGPVLFRQERVGINGRPFQMLKFRTMVT DAEARLLELEKQSRDAGNSVLFKMKDDPRVTPIGRFLRRYSLDELMQLVNVLNGSMSL VGPRPPLAREVEAYETKVHRRFLVKPGITGLWQVSGRSNLSWEDSVRLDLYYVENWSI VGDLVILWKTARAVLQREGAY" misc_feature complement(1674635..1675222) /locus_tag="CMS_1590" /old_locus_tag="CMS1590" /inference="protein motif:HMMPfam:PF02397" /note="HMMPfam hit to PF02397, Bacterial sugar transferase, score 1.8e-79" misc_feature complement(order(1675139..1675207,1675670..1675738, 1675751..1675810,1675847..1675915,1675973..1676041)) /locus_tag="CMS_1590" /old_locus_tag="CMS1590" /note="5 probable transmembrane helices predicted for CMS1590 by TMHMM2.0 at aa 61-83, 103-125, 138-157, 162-184 and 339-361" gene complement(1676343..1676630) /locus_tag="CMS_1591" /old_locus_tag="CMS1591" /db_xref="GeneID:6157393" CDS complement(1676343..1676630) /locus_tag="CMS_1591" /old_locus_tag="CMS1591" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710315.1" /db_xref="GI:170781983" /db_xref="GeneID:6157393" /translation="MPSYRITMTVGALRPGAHPAAVLPAADDEAARIATLEANDIQVV RGEPRLTVRFTADDDAAAERIAGAVRGRAAELVEIPRASITRRDGGTWTRI" gene complement(1676747..1676950) /gene="csp" /locus_tag="CMS_1592" /old_locus_tag="CMS1592" /db_xref="GeneID:6157394" CDS complement(1676747..1676950) /gene="csp" /locus_tag="CMS_1592" /old_locus_tag="CMS1592" /codon_start=1 /transl_table=11 /product="cold shock protein" /protein_id="YP_001710316.1" /db_xref="GI:170781984" /db_xref="GeneID:6157394" /translation="MATGTVKWFNAEKGFGFIAPDNGTADVFAHYSAIATGGYKSLDE NQKVEFEVAQGPKGPQAENIRPL" misc_feature complement(1676750..1676950) /gene="csp" /locus_tag="CMS_1592" /old_locus_tag="CMS1592" /inference="protein motif:HMMPfam:PF00313" /note="HMMPfam hit to PF00313, Cold-shock protein,DNA-binding, score 1.1e-42" misc_feature complement(1676849..1676908) /gene="csp" /locus_tag="CMS_1592" /old_locus_tag="CMS1592" /note="PS00352 'Cold-shock' DNA-binding domain signature." gene 1677101..1678879 /gene="polA" /locus_tag="CMS_1593" /old_locus_tag="CMS1593" /db_xref="GeneID:6158644" CDS 1677101..1678879 /gene="polA" /locus_tag="CMS_1593" /old_locus_tag="CMS1593" /EC_number="2.7.7.7" /codon_start=1 /transl_table=11 /product="putative DNA polymerase I" /protein_id="YP_001710317.1" /db_xref="GI:170781985" /db_xref="GeneID:6158644" /translation="MQADSPAVFPSVTPLEGGGEERGRRPDVGRARDDEGMHILVART PSGVRLVDLDATGTVTATRDVPSAEWPAVAAARERTDPAPRWVWDDTAVWARTLIAAG VRVARCHDLRLSHAILRLSTQTADSALARLPAGPWDAAAPAEREPSASATLFDDLDAS DGRSPDELVAELRLQLEAIAGSAESGRLRLLLAAESAGALVAAEMSADGLPWDTAVHD ALLVDLLGGRPAHSGAPPALLRLAARIREILAAPDLNVDSPPDVLRALRRAGVDASST RQWELQEIDHPVIAPLLEHKKLSRLLTANGWTWMETWIRDGRFHPEYVPGGVVTGRWA ASGGGALQLPRQIRSAVRADPGWRLVVADAAQLEPRVLAALSEDRAMADAGRGTDLYQ GLVDAGVVDTRAHAKVAMLGAMYGATSGESGRLMPRLVRAYPRATGYVERAARAGESG GVVSTRLGRSSPPPGDAWVDVQQIGRAGEASPSDAARARTSARDQGRFTRNFVVQGSA AEWALCWLAGLRRRLAALERPGSRPHLVFFLHDEVMVHTPDDRVDEVRAAVADAAAEA GRLLFGDAPVDFPVTIAVVDDYAQAK" misc_feature 1677773..1678873 /gene="polA" /locus_tag="CMS_1593" /old_locus_tag="CMS1593" /inference="protein motif:HMMPfam:PF00476" /note="HMMPfam hit to PF00476, DNA-directed DNA polymerase, score 4e-10" gene 1678931..1679122 /locus_tag="CMS_1594" /old_locus_tag="CMS1594" /db_xref="GeneID:6158871" CDS 1678931..1679122 /locus_tag="CMS_1594" /old_locus_tag="CMS1594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710318.1" /db_xref="GI:170781986" /db_xref="GeneID:6158871" /translation="MSWGRDQPPEATSPLWSSPSLVLLPEPSGVDSSEPLSVVTEEEA SVCSSACVVVPSSSVAVLS" gene 1679230..1680093 /locus_tag="CMS_1595" /old_locus_tag="CMS1595" /db_xref="GeneID:6157395" CDS 1679230..1680093 /locus_tag="CMS_1595" /old_locus_tag="CMS1595" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710319.1" /db_xref="GI:170781987" /db_xref="GeneID:6157395" /translation="MTDPATVAPAPAPAPTDPAEVLAVYRSRREQMVVMPQGNLALVN TQWISHDAAPQPVYGIPGTWSPLEPGVSGLRVQATAADGLRVDGVLVDGEAIVRGRDD PQPSSVVASDTVSAFVIANEEGTYALRVWDAESDAIRDFGGIDAFPYSEEWVVKADFT PIEGGRAMGFEHLKDDGATKDKVVPGEITFTKDGVDYELAAFREGRALLLVFSDATSG ESTYGVGRFLMVAPSPDGTITLDFNRAYLPPCAFSYNFNCPMPPKQNRFAVPIEAGEK NVLAQGGGLLH" gene complement(1680095..1680697) /locus_tag="CMS_1596" /old_locus_tag="CMS1596" /db_xref="GeneID:6157396" CDS complement(1680095..1680697) /locus_tag="CMS_1596" /old_locus_tag="CMS1596" /codon_start=1 /transl_table=11 /product="PadR family transcriptional regulator" /protein_id="YP_001710320.1" /db_xref="GI:170781988" /db_xref="GeneID:6157396" /translation="MSVRHALLAVLTEGTCYGYQLRTEFSRRTGTAAPLNVGQIYNTL DRLERDGLVVKGATDDAGHVPYTITRAGTAEVEAWLAASVGTVGPRDELLVKVALALS LPGADAAEVVRIHRESSRAAAAELARARSELEAVGDDVVIARLLAVDAQEAQVRARLA FLDAAERRIGEARATGARPVGLGTAPRRGRPARPPGGSAD" misc_feature complement(1680461..1680691) /locus_tag="CMS_1596" /old_locus_tag="CMS1596" /inference="protein motif:HMMPfam:PF03551" /note="HMMPfam hit to PF03551, Transcriptional regulator PadR-like, score 1.9e-08" gene 1681000..1681479 /locus_tag="CMS_1598" /old_locus_tag="CMS1598" /db_xref="GeneID:6157397" CDS 1681000..1681479 /locus_tag="CMS_1598" /old_locus_tag="CMS1598" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710321.1" /db_xref="GI:170781989" /db_xref="GeneID:6157397" /translation="MLYVHSSPRALCPHVEWAAGRALGHAVNFTWDPQPVLNGAMRAE YYWEGPEGSGAAIASGLRGWEHLRYEVTEDAGPGRDGGRWMHTPDLGVFFAQTDTAGN TVIPEDRIRYALDVAGSNTLELHRELRLAMGQAWDDELEAFRHASDFSPVVWLHKVG" gene complement(1681573..1682814) /gene="kasA" /locus_tag="CMS_1599" /old_locus_tag="CMS1599" /db_xref="GeneID:6157398" CDS complement(1681573..1682814) /gene="kasA" /locus_tag="CMS_1599" /old_locus_tag="CMS1599" /EC_number="2.3.1.41" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase I" /protein_id="YP_001710322.1" /db_xref="GI:170781990" /db_xref="GeneID:6157398" /translation="MTTPKKIVVTGIGATSPLGGTAEDTWQALLRGESGISTLEQDWV AKWEIPVTFAGQAKVPSSKVMQRIETKRLDPSSQFALTAAREAWADAGSPEVDPLRFA VDWATGIGGVWTLLDAWDTLREKGPRRVLPMTVPMLMPNGPAAAVGMDLGARAGIQTV VSACASSTESIASAYEHLQAGRADIIVAGGSEASIHPLPIASFAAMQALSKRNDDPQR ASRPYDIARDGFVLGEGGAALVLETEEHAKARGARIYAELVGGAVTSDAFHITAPDPE GTAAARAMIQSVEGAGYSRSDVSHINVHATSTPVGDIAEYKALERVFGAAVHGIPVSA TKASTGHLLGGAGAIEAVFTVKALAERTAPPTINLTEQDPDIALDVVTSPRSLGNADL LAISNSFGFGGHNAVIAFRSV" misc_feature complement(1681579..1682052) /gene="kasA" /locus_tag="CMS_1599" /old_locus_tag="CMS1599" /inference="protein motif:HMMPfam:PF02801" /note="HMMPfam hit to PF02801, Beta-ketoacyl synthase,score 7.1e-48" misc_feature complement(1682074..1682802) /gene="kasA" /locus_tag="CMS_1599" /old_locus_tag="CMS1599" /inference="protein motif:HMMPfam:PF00109" /note="HMMPfam hit to PF00109, Beta-ketoacyl synthase,score 1.4e-64" gene complement(1682894..1683142) /gene="acpP" /locus_tag="CMS_1600" /old_locus_tag="CMS1600" /db_xref="GeneID:6158778" CDS complement(1682894..1683142) /gene="acpP" /locus_tag="CMS_1600" /old_locus_tag="CMS1600" /note="carries the fatty acid chain in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="YP_001710323.1" /db_xref="GI:170781991" /db_xref="GeneID:6158778" /translation="MALSTEEVLAGLAELVNDETGIATDTVEMDKSFTDDLDIDSISM MTIVVNAEEKFDVKIPDEEVKNLKTVGDAVTFITNAQS" misc_feature complement(1682912..1683115) /gene="acpP" /locus_tag="CMS_1600" /old_locus_tag="CMS1600" /inference="protein motif:HMMPfam:PF00550" /note="HMMPfam hit to PF00550, Phosphopantetheine-binding,score 6.2e-15" gene complement(1683196..1684170) /gene="fabH" /locus_tag="CMS_1601" /old_locus_tag="CMS1601" /db_xref="GeneID:6158589" CDS complement(1683196..1684170) /gene="fabH" /locus_tag="CMS_1601" /old_locus_tag="CMS1601" /EC_number="2.3.1.41" /note="FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase III" /protein_id="YP_001710324.1" /db_xref="GI:170781992" /db_xref="GeneID:6158589" /translation="MVERFTRIWGLGAARGELDVPNDDLVGPIDSSDEWIRQRTGIIT RKRAGADVDAVDLATTASLEAIAKAGIRPEQIGIVLVSTVSNTVQTPSMAALLADRIG ANPAPAYDISAACAGYTYGIAQADSFIRSGLAEYVLVVGAEKLSDIVDPTDRSISFLL GDGAGAAIVGPSDTPGISPTVWGSDGSNWDAVGMTGTLKSMRDGSAWPTLRQDGQKVF RWAVWEMVKVAKEALDRAGVAPEQLAAFIPHQANMRIVDEFAKQLGLPESVAIARDIA TTGNTSAASIPLATHRLLEEDPSLSGGLALQIGFGAGLVFGAQVVVLP" gene complement(1684240..1685160) /gene="fabD" /locus_tag="CMS_1602" /old_locus_tag="CMS1602" /db_xref="GeneID:6158680" CDS complement(1684240..1685160) /gene="fabD" /locus_tag="CMS_1602" /old_locus_tag="CMS1602" /EC_number="2.3.1.39" /codon_start=1 /transl_table=11 /product="malonyl CoA-acyl carrier protein transacylase" /protein_id="YP_001710325.1" /db_xref="GI:170781993" /db_xref="GeneID:6158680" /translation="MIIVVCPGQGSQKPGFLSPWLEHPEHARRLGELGAAAGLDLVTH GTTSDADTIRDTAVAQPLIVAAGIVALHALLADGRDAYVAGIAGHSVGEITAAAGAGI LTDDEAMRVVRTRGDAMAEAAAITRTGMSAVVGGDQDAVLARLAELDLEPANFNGGGQ IVVAGAPEALAALQAEPLRGTRVIPLQVAGAFHTHHMAPAVDALRAAVAPLAPRDPRF PFWTNRDGSRVESGAAYLDLVVGQVASPVRWDLCMEAFAAAGVTGLIEVAPAGALTGL AKRGLKGLPTLALSTPDDLPAAIDMLDAHA" misc_feature complement(1684243..1685154) /gene="fabD" /locus_tag="CMS_1602" /old_locus_tag="CMS1602" /inference="protein motif:HMMPfam:PF00698" /note="HMMPfam hit to PF00698, Acyl transferase region,score 1.3e-09" gene complement(1685255..1686529) /locus_tag="CMS_1603" /old_locus_tag="CMS1603" /db_xref="GeneID:6158678" CDS complement(1685255..1686529) /locus_tag="CMS_1603" /old_locus_tag="CMS1603" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710326.1" /db_xref="GI:170781994" /db_xref="GeneID:6158678" /translation="MTPSDRHDTDVETGETKAETLTWLRSLSGELASATLKRLEDTLP WYGDMPPGRRSAVGLVAQAGITSFIHWYDDPDSTPWIAADVFGAAPRELLRSVSLQQT LQLIRVTVEVVEDRVRDRHRTVRDAILLYSREIAFAAADVYARAAEARGLWDARLEAL VVDSILSGEYDDELPSRIAALGWHGHGEVSVLVGTAPAVLDVDQLRRTARHLEADVLI GVQGSRLVLVIGRASPAVVDPEAAAAEAPPVSFLEIATQLEPGFGAGHLVLGHEVPSL VEASRSARAALAGFAVARSWRNAPRLTLADDLLPERALAGDPLARSTLINRIYKPLQA HSTELLATLWCYLDTGRSLEATARELFVHPNTVRYRLKRVSDVIGWDATGAREALILQ AALIIGSIAEAGTTVPKQQASGRARPKRQAAR" misc_feature complement(1685414..1685479) /locus_tag="CMS_1603" /old_locus_tag="CMS1603" /note="Predicted helix-turn-helix motif with score 1692.000, SD 4.95 at aa 351-372, sequence RSLEATARELFVHPNTVRYRLK" gene complement(1686546..1689317) /gene="aceE" /locus_tag="CMS_1604" /old_locus_tag="CMS1604" /db_xref="GeneID:6157399" CDS complement(1686546..1689317) /gene="aceE" /locus_tag="CMS_1604" /old_locus_tag="CMS1604" /EC_number="1.2.4.1" /note="E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase subunit E1" /protein_id="YP_001710327.1" /db_xref="GI:170781995" /db_xref="GeneID:6157399" /translation="MAPKTMSAHHRKRSRVTVNDQDPYSVNHTDQDPEETAEWNESLD GLVETQGRGRARDVMLSLLKRSKELHLGVPMVPTTDYINTIAPENEPDFPGDEDLERR YRAWIRWNAAVTVHRAQRPGIAVGGHIATYASSAALYEVGYNHFFRGQDHPGGGDQVF VQGHASPGTYARAFLEGRLSEHQLDGFRQEKSHEGGGLSSYPHPRLMPEFWQFPTVSM GLGPINAIYQAQANKYLTNRGIKDASDQQVWAFLGDGEMDEVESRGQLQVAANEKLDN LNFVINCNLQRLDGPVRGNGKIIQELESFFRGAGWNVIKVVWGREWDDLLARDTEGAL LDLMNRTPDGDYQTYKAESGAYIRENFFGRDERTAKLVEGYTDDQIWNLKRGGHDYRK VYAAFKAASEHTGQPTVILAKTVKGYGLGPSFEGRNATHQMKKLTLDNLKQFRDELRV PITDAQLEKNPYLPPYYHPGQNDEAIQYMQERRRALGGYSPERRTKHTAITLPDDSAY RISKKGSGTQEIATTMAFVRLLKDLIRSKDFGNRVVPIIPDEARTFGIDAFFPTAKIY NPNGQHYTSVDRELLLSYKESPRGQIVHVGINEAGALAAFTNLGTTYSTQGEPLIPIY VFYSMFGFQRTGDAIWAAGDQMARGFLIGATAGRTTLTGEGLQHADGHSLVLAQTNPA IVAYDPAYAYEIGHVVRSGLERMYGGQHEDPNVMYYLTVYNEPIIHPSEPEGVDVDGI VRGVYKLKDGWVDGPKAQLMASGVAVPWALEAQQLLADDWGVSADVWSVTSWGELRRD GLAAEEHNMLHPHSETRVPYLEEKLRHAEGPFVAVTDFSHAVPDQIRQFVPGDYSTLG ADGFGFSDTRPAARRFFAIDGPSMVVKTLQRLAKQGKVDQDAPKWAIDKYRLLDVNAG TTGSAGGEA" gene 1689443..1689985 /locus_tag="CMS_1605" /old_locus_tag="CMS1605" /db_xref="GeneID:6158587" CDS 1689443..1689985 /locus_tag="CMS_1605" /old_locus_tag="CMS1605" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710328.1" /db_xref="GI:170781996" /db_xref="GeneID:6158587" /translation="MPGVVWLLVPDRGHLSARKDPHPMALANDTQAPDFELANQFGER VRLSEYRGHRAVALVFFPLAFSGTCTGEMCQLEENLGLFADSRVELIGISVDSKHTLR AWAEQQGIDFQLLADFWPHGQVAKEYGVFLEGKGFANRATFLIDTRGIIRGSFITAPG EARELEAYRTAIRDLALVPA" gene complement(1690010..1690699) /locus_tag="CMS_1606" /old_locus_tag="CMS1606" /db_xref="GeneID:6157400" CDS complement(1690010..1690699) /locus_tag="CMS_1606" /old_locus_tag="CMS1606" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710329.1" /db_xref="GI:170781997" /db_xref="GeneID:6157400" /translation="MPIHPSRRTVAEPRWPAAVGLVVAVVLYAIAPTAVPTGLRITVA VIAVGLLVPLLALNPRRFVRETPWSRGLGLALGGLLVVANQVSLVVLVVALVDASEAG PELLLTALQVWATNLLAFALVFWELDRGGPVARRTHARAALAPADFRFPQDEDSGAVS EVARRSSEHADWVPGFVDYAYFSLTNSMAYSPTDVMPLSHRAKALMALEAFAGFVILA LVIARAVNILS" sig_peptide complement(1690010..1690129) /locus_tag="CMS_1606" /old_locus_tag="CMS1606" /note="Signal peptide predicted for CMS1606 by SignalP 2.0 HMM (Signal peptide probability 0.829) with cleavage site probability 0.322 between residues 40 and 41" misc_feature complement(order(1690019..1690087,1690319..1690378, 1690421..1690489,1690526..1690585,1690595..1690663)) /locus_tag="CMS_1606" /old_locus_tag="CMS1606" /note="5 probable transmembrane helices predicted for CMS1606 by TMHMM2.0 at aa 13-35, 39-58, 71-93, 108-127 and 205-227" gene 1690791..1690863 /locus_tag="CMS_r027" /old_locus_tag="CMSr027" /db_xref="GeneID:6157401" tRNA 1690791..1690863 /locus_tag="CMS_r027" /old_locus_tag="CMSr027" /product="tRNA-Val" /db_xref="GeneID:6157401" gene complement(1690917..1691603) /gene="tetR" /locus_tag="CMS_1607" /old_locus_tag="CMS1607" /db_xref="GeneID:6159069" CDS complement(1690917..1691603) /gene="tetR" /locus_tag="CMS_1607" /old_locus_tag="CMS1607" /note="Has high confidence N-terminal extension relative to homologues" /codon_start=1 /transl_table=11 /product="putative tetracycline repressor protein" /protein_id="YP_001710330.1" /db_xref="GI:170781998" /db_xref="GeneID:6159069" /translation="MGFLLRDAAGTDVDDVHLDDVHLNGVHYIGRMARAHATGRHTRD DVARTALRILDEHGLPDFTMRRLAAALDVQPSALYWHFPDKQSLLAELADRIVAEAQA ATTGRSPRHPDWRERVRIAAATLRAALLAHRDGAEVVASTTAMGLGASAARDTLSAAV AAGGLGEADCARAASAILHFVLGHVVHEQQRVQLDRLGLLTARDGEEDPTGDFAFGID LLVRGLGTRL" misc_feature complement(1690920..1691282) /gene="tetR" /locus_tag="CMS_1607" /old_locus_tag="CMS1607" /inference="protein motif:HMMPfam:PF02909" /note="HMMPfam hit to PF02909, Tetracyclin repressor,C-terminal, score 4.1e-14" misc_feature complement(1691328..1691468) /gene="tetR" /locus_tag="CMS_1607" /old_locus_tag="CMS1607" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 2.8e-13" misc_feature complement(1691355..1691420) /gene="tetR" /locus_tag="CMS_1607" /old_locus_tag="CMS1607" /note="Predicted helix-turn-helix motif with score 1636.000, SD 4.76 at aa 62-83, sequence FTMRRLAAALDVQPSALYWHFP" gene 1691680..1692243 /gene="bioY" /locus_tag="CMS_1608" /old_locus_tag="CMS1608" /db_xref="GeneID:6159011" CDS 1691680..1692243 /gene="bioY" /locus_tag="CMS_1608" /old_locus_tag="CMS1608" /codon_start=1 /transl_table=11 /product="putative biotin synthase" /protein_id="YP_001710331.1" /db_xref="GI:170781999" /db_xref="GeneID:6159011" /translation="MLAAVVAVLGLPGSISVLGGVPITAQTLGVMLAGAVLGARLGAL ALAVLLALVAVGLPLLSGGTGGLGVFLGPSGGYLVGWVLGAAAVGWIVHLGGRRPTAV RTAVAMVVGGIVVIYAVGIPVQSLVTRLPLTETAFTSLVFLPGDLVKAAIATAIVMTL VRGYPRAFRRASGWRPAREDAVSAPVR" sig_peptide 1691680..1691754 /gene="bioY" /locus_tag="CMS_1608" /old_locus_tag="CMS1608" /note="Signal peptide predicted for CMS1608 by SignalP 2.0 HMM (Signal peptide probability 0.979) with cleavage site probability 0.821 between residues 25 and 26" misc_feature 1691722..1692171 /gene="bioY" /locus_tag="CMS_1608" /old_locus_tag="CMS1608" /inference="protein motif:HMMPfam:PF02632" /note="HMMPfam hit to PF02632, BioY protein, score 4e-30" misc_feature order(1691722..1691790,1691809..1691877,1691887..1691955, 1691992..1692060,1692103..1692171) /gene="bioY" /locus_tag="CMS_1608" /old_locus_tag="CMS1608" /note="5 probable transmembrane helices predicted for CMS1608 by TMHMM2.0 at aa 15-37, 44-66, 70-92, 105-127 and 142-164" gene 1692240..1692941 /locus_tag="CMS_1609" /old_locus_tag="CMS1609" /db_xref="GeneID:6158626" CDS 1692240..1692941 /locus_tag="CMS_1609" /old_locus_tag="CMS1609" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710332.1" /db_xref="GI:170782000" /db_xref="GeneID:6158626" /translation="MTAAEGIDPHLRLAGVDVRLGDVDALRDVTLDVGARTLAVIGEN GSGKSTFARLVGGLVARTTGEARVLGIDPDRGSRELRRRVALVFSNPDAQIVMPTVAE DVAFSLRPERLSRAESDARVAEALRRLGIQHLADRSSHELSGGQKQLLALAGAFVRRP ELVVADEPTAYLDARNARRVADHLFEDGHRLVLVTHDLAAAARCDAAVLFAGGRLVRT GAPAAVIAEYEAMLG" misc_feature 1692342..1692878 /locus_tag="CMS_1609" /old_locus_tag="CMS1609" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.5e-44" misc_feature 1692363..1692386 /locus_tag="CMS_1609" /old_locus_tag="CMS1609" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1692663..1692707 /locus_tag="CMS_1609" /old_locus_tag="CMS1609" /note="PS00211 ABC transporters family signature." gene 1692938..1693549 /locus_tag="CMS_1610" /old_locus_tag="CMS1610" /db_xref="GeneID:6157402" CDS 1692938..1693549 /locus_tag="CMS_1610" /old_locus_tag="CMS1610" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710333.1" /db_xref="GI:170782001" /db_xref="GeneID:6157402" /translation="MTPADPRRPGRLERMPAGPELVLLMVVVLGVSVLPSTWWGAGIA VPVPVIAYAAAQLGDGCMGLRRLAGQVRAVRWVMLFTLVSQIVLLGPEPAVANTARVT AAITVAGLLVLTTSMTALLDSIERGLVPLRRLGVDTERIALLLTVTAGTVPVLGRLAG DVREAQRARGARPGLRTFVVPFLVVALKHADQLGDALTARGVR" misc_feature order(1692998..1693066,1693154..1693222,1693241..1693300, 1693358..1693417) /locus_tag="CMS_1610" /old_locus_tag="CMS1610" /note="4 probable transmembrane helices predicted for CMS1610 by TMHMM2.0 at aa 21-43, 73-95, 102-121 and 141-160" gene 1693635..1693826 /locus_tag="CMS_1611" /old_locus_tag="CMS1611" /db_xref="GeneID:6157403" CDS 1693635..1693826 /locus_tag="CMS_1611" /old_locus_tag="CMS1611" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710334.1" /db_xref="GI:170782002" /db_xref="GeneID:6157403" /translation="MSSDTADDAAAWSVVDAATHGSSERRGSAQRSLWPLEPLVPSPG IASDVPEDDDAPRRGTRRR" gene 1693879..1694706 /locus_tag="CMS_1612" /old_locus_tag="CMS1612" /db_xref="GeneID:6157404" CDS 1693879..1694706 /locus_tag="CMS_1612" /old_locus_tag="CMS1612" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710335.1" /db_xref="GI:170782003" /db_xref="GeneID:6157404" /translation="MIPTLADVVRVVEDAWPPAGASEWDASGLVSGDPRRSVRRIHLA VDAVRATVDEAVAADADLLLVHHPLLLRGVTTVAETGYKGALLADLIRAGCALHASHT TADVVEDGTSGRLAALLGLVPGTIRPLDPAPGGVLGIGRVGDLPAPTTLGRLAGELAR ILPPTATGIRVAGPYDAPVTRVALCGGAGDSLLAAPEVVTADVYITSDLRHHPASEAR ESAALHGGTPYLIDTSHWASEWLWLDQAADTLRSALPEVEVTVSDIRTDPWDFAVMQ" misc_feature 1693912..1694670 /locus_tag="CMS_1612" /old_locus_tag="CMS1612" /inference="protein motif:HMMPfam:PF01784" /note="HMMPfam hit to PF01784, Protein of unknown function DUF34, score 6.4e-63" gene 1694762..1695529 /locus_tag="CMS_1613" /old_locus_tag="CMS1613" /db_xref="GeneID:6157405" CDS 1694762..1695529 /locus_tag="CMS_1613" /old_locus_tag="CMS1613" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710336.1" /db_xref="GI:170782004" /db_xref="GeneID:6157405" /translation="MQAEQHHERESMKADPSIQKELLDLQEIDTRLTHLTRQLAQLPQ LKEVDALQREMELVRRRLGERTGVVEDARTELARIESDVAVVQARMDRDRTRIEAGGS SKDVQALERELESLLRRRDTLEEVQLEVMQRLEEAQAAQAEVVVERDALAERLAAVEA ERDAAAVELRVQAEQAKKDRDALAPRFPEDLLALYEKQRARYGVGAAMLHRGISLGSN IALHQSDLDALRKRAPDDVVIDPESNAILVRTDESGL" misc_feature 1694819..1695514 /locus_tag="CMS_1613" /old_locus_tag="CMS1613" /inference="protein motif:HMMPfam:PF02591" /note="HMMPfam hit to PF02591, Protein of unknown function DUF164, score 0.00051" gene complement(1696033..1696854) /gene="ppgK" /locus_tag="CMS_1614" /old_locus_tag="CMS1614" /db_xref="GeneID:6157406" CDS complement(1696033..1696854) /gene="ppgK" /locus_tag="CMS_1614" /old_locus_tag="CMS1614" /EC_number="2.7.1.63" /codon_start=1 /transl_table=11 /product="polyphosphate glucokinase" /protein_id="YP_001710337.1" /db_xref="GI:170782005" /db_xref="GeneID:6157406" /translation="MSDDATTAIGIDIGGTGIKGAIVDVATGELCSERVKLPTPQGGE PDDIVATVEQIIDALGEVPAGTPLGVCFPAAIVHGTTMSAANVSPSWIGLEAEKLFEE RLGLGITFVNDADAAGYAEARYGAAKDVRGLVIMTTLGTGIGTALIHDGVLIPNAELG HMDVAGRRDFERRASYAAKERAHLNWKRWAARLQVYYGQLEKLMWPELFIVGGGVSKN HKHFLPLLRLRTPIVPAELRNNAGIMGAAALAAHAAGAVTHAPAFDLVDKTKPED" misc_feature complement(1696318..1696827) /gene="ppgK" /locus_tag="CMS_1614" /old_locus_tag="CMS1614" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 1.2e-07" gene 1696929..1697111 /locus_tag="CMS_1615" /old_locus_tag="CMS1615" /db_xref="GeneID:6158874" CDS 1696929..1697111 /locus_tag="CMS_1615" /old_locus_tag="CMS1615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710338.1" /db_xref="GI:170782006" /db_xref="GeneID:6158874" /translation="MSDSDEQYWYDDRTGEVEKGMLSPAAHRIGPFATAEEAAKAPQR LRERAEKWAAEERDDD" gene complement(1697121..1697990) /gene="panB" /locus_tag="CMS_1616" /old_locus_tag="CMS1616" /db_xref="GeneID:6157407" CDS complement(1697121..1697990) /gene="panB" /locus_tag="CMS_1616" /old_locus_tag="CMS1616" /EC_number="2.1.2.11" /note="catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="YP_001710339.1" /db_xref="GI:170782007" /db_xref="GeneID:6157407" /translation="MQSPDAAVTPPEPARLSTEPAGPPKRVRIRHFARAKEQGIRITG LTSYDMLTAGVFDEAGIDFLLVGDSAGNTVLGYDTTVPVTVDELIPLARAVASSAARA LVVADLPFGSYESGPDQALATSVRFMKEARAHAVKLEGGVRSAEQIRRVVSSGIPVMG HIGFTPQSEHGLGGHIIQGRGDAAEALLADAHAVEDAGAFAVVLEMVPEQVARRVTEE LRIPTIGIGAGNGTDGQILVWTDFAGLTSGRVPRFVRRYADMRAVLLDAATRYRDDVL SGDFPSAAESYSD" misc_feature complement(1697139..1697918) /gene="panB" /locus_tag="CMS_1616" /old_locus_tag="CMS1616" /inference="protein motif:HMMPfam:PF02548" /note="HMMPfam hit to PF02548, Ketopantoate hydroxymethyltransferase, score 2e-128" gene 1698076..1699413 /gene="glnA2" /locus_tag="CMS_1617" /old_locus_tag="CMS1617" /db_xref="GeneID:6158847" CDS 1698076..1699413 /gene="glnA2" /locus_tag="CMS_1617" /old_locus_tag="CMS1617" /EC_number="6.3.1.2" /codon_start=1 /transl_table=11 /product="glutamine synthetase 2" /protein_id="YP_001710340.1" /db_xref="GI:170782008" /db_xref="GeneID:6158847" /translation="MDKQRDFVLRTIEERGIKFVRLWFTDVTGTLKSVAIAPAEVEGA FAEGLGFDGSAIEGLTRSYEADMLAHPDPTTFQILPWRGEIDPTARMFCDISTPDGQP AIADPRNVLKRTLEKAADRGFTFYTHPEIEFYLLESSEFGVDGPEPVDAAGYFDNVPG GTAHDFRRRSVRMLEDLGISVEFSHHEAGPGQNEIDLRYADALTTADNIMTFRTVIKE VAIEQGVYATFMPKPLAAHPGSGMHTHMSLFEGDVNAFYASGAEYQLSTIGRQFIAGL LRHAPEITAVTNQFVNSYKRLWGGGEAPSFVTWGHNNRSALVRVPLYKPNKGNSSRVE YRAIDSAANPYLSFSLMLAAGLKGIEEGYELPAEAEDNVWTLSDAERRALGYAPLPSS LDHAIQLMERSELVAETLGEQVFNYVLLNKRQEWRDYRAQVTPYELRSNLEML" misc_feature 1698121..1698372 /gene="glnA2" /locus_tag="CMS_1617" /old_locus_tag="CMS1617" /inference="protein motif:HMMPfam:PF03951" /note="HMMPfam hit to PF03951, Glutamine synthetase,beta-Grasp, score 3.2e-30" misc_feature 1698385..1699152 /gene="glnA2" /locus_tag="CMS_1617" /old_locus_tag="CMS1617" /inference="protein motif:HMMPfam:PF00120" /note="HMMPfam hit to PF00120, Glutamine synthetase,catalytic region, score 4.5e-122" misc_feature 1698769..1698816 /gene="glnA2" /locus_tag="CMS_1617" /old_locus_tag="CMS1617" /note="PS00181 Glutamine synthetase putative ATP-binding region signature." gene 1699472..1702492 /gene="glnE" /locus_tag="CMS_1618" /old_locus_tag="CMS1618" /db_xref="GeneID:6158723" CDS 1699472..1702492 /gene="glnE" /locus_tag="CMS_1618" /old_locus_tag="CMS1618" /EC_number="2.7.7.42" /note="catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme" /codon_start=1 /transl_table=11 /product="bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase" /protein_id="YP_001710341.1" /db_xref="GI:170782009" /db_xref="GeneID:6158723" /translation="MRRGQTLLGALARAGFARLSEVGEALEEAAELSGWAEAELVEAL HSSADPDGALDALVRLLREDPERTRAVLADADARHRLARVLGSSRGLGEFLTRHTDEL DAFARPLEATPAPADVRDRMLDAVRAVDGVAGLTGPSARSALRVRYRALVARVAAWDL VHPDPLAAVRPVTAALADLAGAALEASLSVARAELSAAGTFGRARPDEIAATRLAIIG MGKAGARELNYVSDVDVIFVAEAATDAEGEPVIEPARAVELATRLAVLAMRGIDEHEI EPALWEVDANLRPEGKAGALVRTLDSHLAYYERWAKDWEFQALLKARPLAGDAELGGR FADAVAPLVWSSASREGFVGQVQRMRTRVTDNIPADQLHQQIKLGPGGIRDIEFTVQL LQLVHGQGDEAVRDCSTLAALVALADAGYIGRTEAGEFAKDYRYLRLLEHRLQLDQLR RTHLMPTEEERLRILARSTGLDGRAEELTARWTATKTAVRTLHERLFYRPLLAAVASL PEESLALTSDQAAARLSAIGFVDARGALAHIRALTQGVSRSSAIQRHLLPVLLQWFAD GPDPDHGLLAFRRLSEALGQSNWFLRMLRDSAGAAQRLAQVLSGSRFVSELLDRVPET AAWLARDEDLRPRTWAALEEEAVATVNRHPTADAAAAALRTLRRREVLRLAIGAIVGV THVETLGPSLADITTATLRGVMRAIRREDGPWPEFAVVAMGRYGGAELGFGSDADVMY VFRPIAGMDPELAQRRAQLIVSELTRLTEDSRLPLDLDTGLRPEGRNGPVVRSFASYR AYYERWSLTWEAQALLRARGVVGDSGLIADFTSLADRFRYPDGIGDADVREIKRIKAR VENERLPQGADPTRHLKLGRGSLSDVEWLVQLIQLQHAHEHPALRTPTTLGALEAAVA SHLVTEDDAARLRDAWLLASRVRSAMTLWTNRTADVLPADRAALDAIARLLEYPPGSA CVLEEEYLGVTRRSRAVFERLFYGIDDRPDPRSV" misc_feature 1699877..1700557 /gene="glnE" /locus_tag="CMS_1618" /old_locus_tag="CMS1618" /inference="protein motif:HMMPfam:PF03710" /note="HMMPfam hit to PF03710, Glutamate-ammonia ligase adenylyltransferase, score 2.6e-59" misc_feature 1701434..1702039 /gene="glnE" /locus_tag="CMS_1618" /old_locus_tag="CMS1618" /inference="protein motif:HMMPfam:PF03710" /note="HMMPfam hit to PF03710, Glutamate-ammonia ligase adenylyltransferase, score 2.5e-38" gene complement(1702581..1704005) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /db_xref="GeneID:6158724" CDS complement(1702581..1704005) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /EC_number="6.3.1.2" /codon_start=1 /transl_table=11 /product="glutamine synthetase I" /protein_id="YP_001710342.1" /db_xref="GI:170782010" /db_xref="GeneID:6158724" /translation="MFRDSSEVLAFIKDTDVKFLDIRFTDLPGVQQHFNIPASTVDEE FFSVGQLFDGSSIRGFASIHESDMQLIPDVTTAYIDPFRIERTLIMVFDIYNPRNGEI YARDPRQVAKKAEKFLAASGIADTAFFAPEAEFYIFDDVRYEVNQHTSFYSVDSEEGA WNSGREEEGGNLGNKTPYKGGYFPVSPVDKQADLRDDISLKLIDAGLILERAHHEVGT GGQAEINYRFDTMVHAADDILKFKYIVKNTAEQWGKTATFMPKPLFGDNGSGMHTHQS LWNDGKPLFYDEAGYGGLSDVARWYIGGILKHAPAILAFTNPTVNSYHRLVPGFEAPV NLVYSAGNRSASIRIPITGTNPKAKRIEFRAPDASSNPYLAFAAQLMAGIDGIKNRIE PHEPVDKDLYELPPEEAKNIPQVPASLGAALEALEADHEFLTAGNVFTPDLIETWIEY KREMEIKPLAQRPHPFEFELYYGV" misc_feature complement(1702845..1703696) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /inference="protein motif:HMMPfam:PF00120" /note="HMMPfam hit to PF00120, Glutamine synthetase,catalytic region, score 5.9e-162" misc_feature complement(1703178..1703225) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /note="PS00181 Glutamine synthetase putative ATP-binding region signature." misc_feature complement(1703712..1703960) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /inference="protein motif:HMMPfam:PF03951" /note="HMMPfam hit to PF03951, Glutamine synthetase,beta-Grasp, score 1.6e-38" misc_feature complement(1703796..1703852) /gene="glnA" /locus_tag="CMS_1619" /old_locus_tag="CMS1619" /note="PS00180 Glutamine synthetase signature 1." gene 1704199..1704627 /locus_tag="CMS_1620" /old_locus_tag="CMS1620" /db_xref="GeneID:6158722" CDS 1704199..1704627 /locus_tag="CMS_1620" /old_locus_tag="CMS1620" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710343.1" /db_xref="GI:170782011" /db_xref="GeneID:6158722" /translation="MSATLPNPDLGDPGRNRWPGERLGLPERGRGSVARAGRRIVGVC IDWALAVLVSWAFFAYDSTATLAIFAVMQYVLIVTLGGSVGHVVLGMRVRPLAGGYVS LWRPALRTVLLCLVLPAVVWNADQRGLHDVFSGTVLVRTS" misc_feature 1704295..1704618 /locus_tag="CMS_1620" /old_locus_tag="CMS1620" /inference="protein motif:HMMPfam:PF06271" /note="HMMPfam hit to PF06271, RDD, score 3.8e-09" misc_feature order(1704316..1704372,1704400..1704468) /locus_tag="CMS_1620" /old_locus_tag="CMS1620" /note="2 probable transmembrane helices predicted for CMS1620 by TMHMM2.0 at aa 40-58 and 68-90" gene complement(1704654..1705118) /locus_tag="CMS_1621" /old_locus_tag="CMS1621" /db_xref="GeneID:6157408" CDS complement(1704654..1705118) /locus_tag="CMS_1621" /old_locus_tag="CMS1621" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710344.1" /db_xref="GI:170782012" /db_xref="GeneID:6157408" /translation="MRSDPPRSQPQPERLSHYGRSRRERARRGLGPSIAAVCALAGVL VVVVSFQDSTRARFTTVGADLTQGAVVVPVEDPASRASECVDTSSCTLLDMTAPEDCS AALVRFEVTTGRSDDGRETESRELGAVRAGSPARVVLGGVDPELVYLGCEPG" sig_peptide complement(1704654..1704806) /locus_tag="CMS_1621" /old_locus_tag="CMS1621" /note="Signal peptide predicted for CMS1621 by SignalP 2.0 HMM (Signal peptide probability 0.988) with cleavage site probability 0.647 between residues 51 and 52" misc_feature complement(1704966..1705034) /locus_tag="CMS_1621" /old_locus_tag="CMS1621" /note="1 probable transmembrane helix predicted for CMS1621 by TMHMM2.0 at aa 29-51" gene complement(1705436..1706089) /locus_tag="CMS_1622" /old_locus_tag="CMS1622" /db_xref="GeneID:6157409" CDS complement(1705436..1706089) /locus_tag="CMS_1622" /old_locus_tag="CMS1622" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710345.1" /db_xref="GI:170782013" /db_xref="GeneID:6157409" /translation="MWQVFQMTRRYDKSSVWWMLLALLGPIVVGVLLAVFATGGNWLT AILFVIAGVFAGILAFLIVLGRKAERAAYLQIKGQPGAVGVVLRSSLKRGWVGSEMPV AVNGKSQDAVYRAVGRAGVALIGEGPKSRTTRMLEDERRKIARVLPNVPVHFVFVGPD ADSVELHRLAGRLQRFPRTITKAEVLAVNNRLTSLGQNSMPIPKGVDPFKVRPSRAR" sig_peptide complement(1705436..1705546) /locus_tag="CMS_1622" /old_locus_tag="CMS1622" /note="Signal peptide predicted for CMS1622 by SignalP 2.0 HMM (Signal peptide probability 0.910) with cleavage site probability 0.843 between residues 37 and 38" misc_feature complement(order(1705898..1705966,1705976..1706044)) /locus_tag="CMS_1622" /old_locus_tag="CMS1622" /note="2 probable transmembrane helices predicted for CMS1622 by TMHMM2.0 at aa 16-38 and 42-64" gene 1706525..1708081 /locus_tag="CMS_1623" /old_locus_tag="CMS1623" /db_xref="GeneID:6157410" CDS 1706525..1708081 /locus_tag="CMS_1623" /old_locus_tag="CMS1623" /note="Has weak matches to putative protein kinases" /codon_start=1 /transl_table=11 /product="putative membrane-spanning protein" /protein_id="YP_001710346.1" /db_xref="GI:170782014" /db_xref="GeneID:6157410" /translation="MVAGYRLVRLIGKGTRCQVHLGRPTRPADAQDGPTNVAVKIVPV TERSRGEAEILALQAVTSEHVVALHDVATLADGSLCVVQSLGARGTAAALLGRRGSLT PGETVTLVASMLRGLGDLHEAGIAHGAVDLTHVVIDATGRPLLGGLGSSHVVAGGAGG AGADGLRGADPVEQDLGRVARIVEALRDPGDARGRASFDRWEAWSALLDACVHGESDL GAHDLADRLLDVADATPLADAGGSPSDEHVDRDLSEGTPSLGLASGAVGPRAARTTGT RRRFRLSGRTHQDARRRHRAGRATRADAIDARRTAVGVAVRSELASVSPRVWALGGSA LLLLVAGVVAVPLLTSPASGATGTPTSTPAPSGSPSAVLDGPPSPAPADDGDADADAD AVTSPDPAIAAPALIRLRASCLRSADATCVSGVDEAGSAVDDADRSTIARGGIDPLDV AALHVADILGPAQRLGDTALIELRPEAGPGTGTPAADAGGRAPERRPASLLIVRGEAG WRIRDLMDDR" misc_feature 1706537..1707250 /locus_tag="CMS_1623" /old_locus_tag="CMS1623" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 0.0013" misc_feature 1707503..1707568 /locus_tag="CMS_1623" /old_locus_tag="CMS1623" /note="1 probable transmembrane helix predicted for CMS1623 by Phobius" gene complement(1708107..1709555) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /db_xref="GeneID:6157411" CDS complement(1708107..1709555) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /EC_number="2.3.1.61" /codon_start=1 /transl_table=11 /product="dihydrolipoamide succinyltransferase" /protein_id="YP_001710347.1" /db_xref="GI:170782015" /db_xref="GeneID:6157411" /translation="MSESVNLPALGESVTEGTVTRWLKNVGDHVEVDEPLLEVSTDKV DTEIPSPVAGVIEEILVQEDETVEVGAVLVRIGDGSGGGDAPAEEPAAEQAAEPEPAA DEAVEDTVIPSTEAEDDAEAPAPVEPEPAPAAEQPDPEPTPAPAPAAPAPVAATPAPA PAAAAPAPAAAPAPAASGNAGYVTPLVRKLANERGVDVSSVVGTGVGGRIRKEDVLAA AEAAASKSAPTASAPAAPAAAPLETSPLRGTTAKMSRMRKLIADRAVVSMQSTAQLTS VVEVDVTKVARFRDRVKGDFLEKTGVKLSFLPFFALAAAEALKAYPVVNATVDGDSIV YPDHENISIAVDTERGLLTPVVKNAEGKNLAQFASEIADLAARTRDNKLSPDELAGGT FTLTNTGSRGALFDTPVVFLPQSAILGTGIVTKRPVVITADGQDTIAIRSTVYLALSY DHRIVDGADASRFLVAVKNRLEAGAFDADLGI" misc_feature complement(1708125..1708823) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /inference="protein motif:HMMPfam:PF00198" /note="HMMPfam hit to PF00198, Catalytic domain of components of various dehydrogenase complexes, score 3.2e-109" misc_feature complement(1708899..1709009) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /inference="protein motif:HMMPfam:PF02817" /note="HMMPfam hit to PF02817, E3 binding, score 1.5e-16" misc_feature complement(1709328..1709549) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /inference="protein motif:HMMPfam:PF00364" /note="HMMPfam hit to PF00364, Biotin/lipoyl attachment,score 7.6e-33" misc_feature complement(1709388..1709477) /gene="sucB" /locus_tag="CMS_1624" /old_locus_tag="CMS1624" /note="PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site." gene complement(1709616..1710989) /gene="pdhD" /locus_tag="CMS_1625" /old_locus_tag="CMS1625" /db_xref="GeneID:6158998" CDS complement(1709616..1710989) /gene="pdhD" /locus_tag="CMS_1625" /old_locus_tag="CMS1625" /EC_number="1.8.1.4" /note="E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="YP_001710348.1" /db_xref="GI:170782016" /db_xref="GeneID:6158998" /translation="MSEQNFDVVVLGGGSGGYAAALRAVQLGKTVGLVEKGKLGGTCL HRGCIPTKALLHSAEVADVSRESEKYGVIATFDGVDIAKVNAYREAIVASKYKGLQGL IKARGITVIEGEGRLTSGTTVQVGDQTITGKSVVLATGSYSRTLPGLEIGGCVITSEQ ALELDYIPKKVAILGGGVIGVEFASVWRSFGVEVQIVEALPHLVPNEEESISKQFERA FRKRGIAFSLGVRFKSVMQHDQGVQVALEDGTTYDADLLLVAVGRGPATQGLGFEEAG VKTDRGFVLTDERLQTSVPGVYAVGDIVPGLQLAHRGFQQGIFVAEEIAGNKPVVVED INIPKVTYSDPEVASVGYSEAKAVEKFGADKVSSYEYNLGGNGKSSILGTAGSIKVVR VQDGPVVGIHMIGVRVGELIGEGQLIVNWEAYPEDVANLVHAHPTQNEALGEAHLALA GTPLHAL" misc_feature complement(1709652..1709981) /gene="pdhD" /locus_tag="CMS_1625" /old_locus_tag="CMS1625" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 6.2e-33" misc_feature complement(1710054..1710971) /gene="pdhD" /locus_tag="CMS_1625" /old_locus_tag="CMS1625" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 4.4e-93" misc_feature complement(1710840..1710872) /gene="pdhD" /locus_tag="CMS_1625" /old_locus_tag="CMS1625" /note="PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site." gene complement(1711081..1712544) /gene="pepA" /locus_tag="CMS_1626" /old_locus_tag="CMS1626" /db_xref="GeneID:6158855" CDS complement(1711081..1712544) /gene="pepA" /locus_tag="CMS_1626" /old_locus_tag="CMS1626" /EC_number="3.4.11.1" /note="catalyzes the removal of N-terminal amino acids preferably leucine from various peptides" /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase" /protein_id="YP_001710349.1" /db_xref="GI:170782017" /db_xref="GeneID:6158855" /translation="MEADALVVAVSSGKEGIRVHAPGGLELDVDGLSAIGVTGGRDEV VRIAGTGTAATTIALVGAGSGPLDAVALRYVVGSATRQLRGVERVAVAVPVTSLEELT AVLEGAALGVYSFDSYRRDSLAGQKPRASAVTVVAQGDSWTAQDADEAVARATAVADA VAGTKDLVNTPPLDLYPATFVDAVRERTAGLPVDVRVWDEEALAADGFGGILGVGQGS TRPPRLVKVAYSPAGATRHLALVGKGITYDTGGISLKPAVPMIGMKYDMTGAATILEV VVAAARLALPVRLTAWLCIAENMPSGSAIRPDDVLRMRGGTTVEVLNTDAEGRLVMAD GIAAASEEHPDAIVDIATLTGAQVVALGERYSAVMGEDALVGRLLDAAHEQGESMWGM PLPEAMRALLNSDIADIANVKPGNPAGGMLVAGVFLKEFVGRTGDADDAPRIPWAHID IAGPSHNKSGGHGFTGKGPTGVAVRTLLALAAGFSRA" misc_feature complement(1711108..1712064) /gene="pepA" /locus_tag="CMS_1626" /old_locus_tag="CMS1626" /inference="protein motif:HMMPfam:PF00883" /note="HMMPfam hit to PF00883, Peptidase M17, cytosol aminopeptidase, C-terminal, score 2.9e-128" misc_feature complement(1711555..1711578) /gene="pepA" /locus_tag="CMS_1626" /old_locus_tag="CMS1626" /note="PS00631 Cytosol aminopeptidase signature." misc_feature complement(1712179..1712526) /gene="pepA" /locus_tag="CMS_1626" /old_locus_tag="CMS1626" /inference="protein motif:HMMPfam:PF02789" /note="HMMPfam hit to PF02789, Peptidase M17, cytosol aminopeptidase, N-terminal, score 0.00014" gene 1712826..1713638 /locus_tag="CMS_1627" /old_locus_tag="CMS1627" /db_xref="GeneID:6158857" CDS 1712826..1713638 /locus_tag="CMS_1627" /old_locus_tag="CMS1627" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710350.1" /db_xref="GI:170782018" /db_xref="GeneID:6158857" /translation="MSQVSEYLLSTLSHRDVLRFDTDTLLDYRARRPTIYFDQDHLAD YRPARLALYLAHDEIGQPFLLLTGFEPDFRWEAFTAAVLGIVDRYRVSTTTWVHAIPM PVPHTRDINVTVSGNRTELIDALSVWKPHTQVPANALHLLEHRLHDAGHPVAGFVLLV PHYLADTEFPLAAVAALESISAATGLIFPTDRLREEGRDFVGRIDEQVAGNQELARLV TTLEERYDSYMEDTPLKSPLTDEDGALPTADEIAAELEKFLARRRPGDGDAA" misc_feature 1712829..1713506 /locus_tag="CMS_1627" /old_locus_tag="CMS1627" /inference="protein motif:HMMPfam:PF01908" /note="HMMPfam hit to PF01908, Protein of unknown function DUF75, score 3.8e-28" gene 1713714..1715036 /locus_tag="CMS_1628" /old_locus_tag="CMS1628" /db_xref="GeneID:6157412" CDS 1713714..1715036 /locus_tag="CMS_1628" /old_locus_tag="CMS1628" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710351.1" /db_xref="GI:170782019" /db_xref="GeneID:6157412" /translation="MSTRRARIVLGVAMLAYLSSVLQRGSLGIASVEAGERFHVSASL LSTLAVTQLVVYAALQIPVGVLIDRIGPRALLATGALLMVAGQVTLALSTSLEVAILG RMLVGAGDAMTFVSGLRLINSWFSGPRVPVLSQWFANVGQLGQVLSAIPLSLVLHTAG WTPAFLGSASVAVVALIAVVVAVRDRPAGHVPPPRVPWGDSMRELGRSLRRPGTQLGF WSHFVTQSSGMVFSLLWGFPFLVGGLGYSPALASALLIVIVASGMVVGPVIGILTGRF PFRRSNLVLGVVAMMGVAWAVLLLWPGVPPLAVVVLVVMAIGIGGPGGQIGLDFARTF NPPRSLGAASGIVNVAGFTASFTMMLLIGIALDVLDGIRVAGGSRSDLYAFDSFRVAF AVQYLVVGFGALMLVRTRRLTRRLLADEGIRVGPIWVAYLDRRRRRRA" sig_peptide 1713714..1713809 /locus_tag="CMS_1628" /old_locus_tag="CMS1628" /note="Signal peptide predicted for CMS1628 by SignalP 2.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.537 between residues 32 and 33" misc_feature order(1713732..1713800,1713843..1713911,1713948..1714016, 1714194..1714262,1714362..1714430,1714458..1714526, 1714560..1714628,1714638..1714706,1714743..1714811, 1714875..1714934) /locus_tag="CMS_1628" /old_locus_tag="CMS1628" /note="10 probable transmembrane helices predicted for CMS1628 by TMHMM2.0 at aa 7-29, 44-66, 79-101, 161-183,217-239, 249-271, 283-305, 309-331, 344-366 and 388-407" misc_feature 1713750..1714814 /locus_tag="CMS_1628" /old_locus_tag="CMS1628" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1715664..1716731 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /db_xref="GeneID:6157413" CDS 1715664..1716731 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /codon_start=1 /transl_table=11 /product="putative RNA polymerase sigma factor" /protein_id="YP_001710352.1" /db_xref="GI:170782020" /db_xref="GeneID:6157413" /translation="MVPVAEDDADDEVVEDGAAKPPVVLEPLPTGAMVLSNKEEDEDV PVYSTTITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAEDKLANTPGISR ELERELRWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVE KFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLG REPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPAD AVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIE SKTMAKLRHPSRSQSLRDYLE" misc_feature 1715829..1715939 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /inference="protein motif:HMMPfam:PF00140" /note="HMMPfam hit to PF00140, Sigma-70 region 1.2, score 6.3e-16" misc_feature 1716027..1716239 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 5.8e-29" misc_feature 1716099..1716140 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /note="PS00715 Sigma-70 factors family signature 1." misc_feature 1716249..1716497 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /inference="protein motif:HMMPfam:PF04539" /note="HMMPfam hit to PF04539, Sigma-70 region 3, score 7.3e-41" misc_feature 1716531..1716692 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 6.8e-23" misc_feature 1716603..1716668 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /note="Predicted helix-turn-helix motif with score 1613.000, SD 4.68 at aa 314-335, sequence KTLDQIGDTFGVTRERIRQIES" misc_feature 1716606..1716686 /locus_tag="CMS_1629" /old_locus_tag="CMS1629" /note="PS00716 Sigma-70 factors family signature 2." gene 1716735..1718051 /locus_tag="CMS_1630" /old_locus_tag="CMS1630" /db_xref="GeneID:6157414" CDS 1716735..1718051 /locus_tag="CMS_1630" /old_locus_tag="CMS1630" /codon_start=1 /transl_table=11 /product="putative ligase" /protein_id="YP_001710353.1" /db_xref="GI:170782021" /db_xref="GeneID:6157414" /translation="MPLPLPLPLPLPLPLRLAVAAGRAARWAARLRGGGSAVPGVVAL RLDPRFLERTIADLPHGVVAVTGSNGKSTTTHMLTAVLRAHGLRVFTNPSGGNLPQGI ASAVLADADASGRLDADVAVLEIDEAYGVALSALLTPRTVLLLNIQIDQLNRFHEPDR VVGMLERIAATATEAVVANRDDAHVNAIAAHTARTGRAAVDWFGVSEELLGDSKHGLA SAPRFGSEDPDPVHVDAGVEAVALAGRDAVFRLASGDLPVTLPSRGLHYAVDAAGALA TARRVLGDRFDPARAAEGLGSVAAVYGRGEMLRAGDEDIEIIMMKNPASLQMNLDALG DPPEQVLLAVDDGTPDPSWIYDTDLSALTHADVVSGTKGYQLAVRFGYEGLEVGRVEP DLRRAVQAFLAMEKPSRGVKTMIVNYEQMMAIRRILGYTDLEGGPA" gene 1718048..1718782 /locus_tag="CMS_1631" /old_locus_tag="CMS1631" /db_xref="GeneID:6157415" CDS 1718048..1718782 /locus_tag="CMS_1631" /old_locus_tag="CMS1631" /codon_start=1 /transl_table=11 /product="putative amidotransferase" /protein_id="YP_001710354.1" /db_xref="GI:170782022" /db_xref="GeneID:6157415" /translation="MSDALRILHLYPDELGINGDRGNVTVLVERARIRGIRTEVVRHA PGGGDPGDADLVVIGSGPLTAQRAVLPDLVAHAPRLVALREAGVPFLAVGGGLQLLGE SVRLIDGGELVGAAVLPVRTTLTAERRVGDLVLDTPDGELVGYENHGSTLEIGEHAPL GMVRAGFGNAGQGGGEGVRVGASVGTHLGGPVLALNPRLADDLLSAALARHGLELPAD ISGTLDRLDGWAQEARATVMARPAHY" misc_feature 1718183..1718638 /locus_tag="CMS_1631" /old_locus_tag="CMS1631" /inference="protein motif:HMMPfam:PF07685" /note="HMMPfam hit to PF07685, CobB/CobQ-like glutamine amidotransferase domain" gene complement(1718893..1719120) /locus_tag="CMS_1632" /old_locus_tag="CMS1632" /db_xref="GeneID:6157416" CDS complement(1718893..1719120) /locus_tag="CMS_1632" /old_locus_tag="CMS1632" /note="Homologues in Mycobacteriophage" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710355.1" /db_xref="GI:170782023" /db_xref="GeneID:6157416" /translation="MTPTATERPVDELDNHQLTANDRCDSCGAQAYIRVEVNSSELLF CAHHGKKYQEKLSAIATSWHDESSRLLDERA" gene 1719335..1721413 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /db_xref="GeneID:6157417" CDS 1719335..1721413 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /EC_number="5.99.1.3" /note="decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /protein_id="YP_001710356.1" /db_xref="GI:170782024" /db_xref="GeneID:6157417" /translation="MAASDYSARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEII DNSVDEALGGHGDLIDVRLHPDGSVEVRDTARGVPVDIEPKTGLSGVEVVFTKLHAGG KFGSGSYASSGGLHGVGASVVNALSERLDVEVDRGGKTYAMSFRRGEPGIFEDQGEAS PDAPFRPFTSGSELRVVGKVRKGVTGTRIRYWADRQIFTRGASFLTEELLGRARQTAF LVPGLSIDIKDLRGEQPVRESFRFDGGIAEFVDHLAVDAPLTDTWRLEGSGTFTETVP VLTDGGAMVPTELTRECAVDIALRWGTGYDTRFKSFVNIIATPKGGTHQAGFEAGLLK FVRAQVEANARKLKVGTDKLEKDDVLAGLTAVLTVRFPEPQFEGQTKEVLGTPAVRAI VSQVVQKAMADRFASPRREDKAQTAVLLEKVVGEMKSRISARTHKETQRRKNALESSS LPAKLVDCRSNDVANSELFIVEGDSALGTAKLARDSEYQALLPIRGKILNVQKASLPD MLSNTECASIIQVLGAGSGRTFDLSAARYGKIIIMSDADVDGAHIRTLLLTLFFRYMR PMIDEGRVFAAVPPLHRVVVMNPGSKPNDVIYTYSERELAAVLAQAKRQGKRYQDPIQ RYKGLGEMGADQLATTTMDRRNRTLRRVRVDDAEAATRMFELLMGNDVAPRKEFIIDG AGSVRDRIDV" misc_feature 1719425..1719922 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 4.3e-23" misc_feature 1720067..1720651 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /inference="protein motif:HMMPfam:PF00204" /note="HMMPfam hit to PF00204, DNA topoisomerase II, score 2e-25" misc_feature 1720730..1721065 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /inference="protein motif:HMMPfam:PF01751" /note="HMMPfam hit to PF01751, TOPRIM, score 0.001" misc_feature 1720742..1720768 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /note="PS00177 DNA topoisomerase II signature." misc_feature 1721174..1721374 /gene="gyrB" /locus_tag="CMS_1633" /old_locus_tag="CMS1633" /inference="protein motif:HMMPfam:PF00986" /note="HMMPfam hit to PF00986, DNA gyrase, subunit B,C-terminal, score 7.8e-30" gene complement(1721495..1724041) /gene="gyrA" /locus_tag="CMS_1634" /old_locus_tag="CMS1634" /db_xref="GeneID:6158740" CDS complement(1721495..1724041) /gene="gyrA" /locus_tag="CMS_1634" /old_locus_tag="CMS1634" /EC_number="5.99.1.3" /note="decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit A" /protein_id="YP_001710357.1" /db_xref="GI:170782025" /db_xref="GeneID:6158740" /translation="MSPSTTHTTPDEPSERIEDVDVSTEMENSFLEYAYSVIYSRALP DARDGLKPVQRRILYQMSEMGLRPDRGHVKSARVTGEVMGKLHPHGDSAIYDAMVRMA QPFTLRVPLIDGHGNFGSLDDGPAAPRYTEARLAASALAMVEGLDEDVVDFVPNYDNA FMQPAVLPAAFPNLLVNGASGIAVGMATNMVPHNLIEVVGAARHLIDHPDATLDDLMA FVPGPDLPTGGTIIGLSGVKDAYLTGRGSFKTRARVSVESLTPRKSGLVVTELPYLVG PEKVIEKIKDGVQNKKLSGITNVTDLTDRTHGLRLVIEIKTGFNPEAVLEQLYRYTPL EDGFSINNVALVDGSPQTLGLKELLQVYVAHRLDVVTRRTRYRLARRQERLHLVLGLL IAILDIDEVIQVIRGSDDTEQARARLMDVFDLSTLQADYILELRLRRLTRFSRIELEE ERDRLQAEIAELEAILADPRRLRALVSTELQEVADRFGTPRRTLLTEAAPSVAGASSR RAAPVLEIADVPCRVLLSTTGRAVRVDLPTDAPGTPLQTVRRSSHDAVLTAIETTSRT RIGAITNTGRLITMTPVDLPVVPVASVQLGAGVRIRDYLGLTDRKERVVALVALGTDE AIALGTRQGVVKRVAPSALPAKPEYEVIALKKGDEVVGARQGAETDELVFVTSEAQLL HFPAVSVRPQGVQAGGIAGVNLGAGAHVLFFSSVAPEGAEVVTVSASSATIAGVDPGR AKVSAFGDFPRKGRATGGVRAHAYLKGEDHLALAWVGPGPALAVGPAGEVRQLPPTGM KRDGSGIPLEKPIGSVGQAVTPAEAPDAASGAAVGVVEPSAEDGSAPLET" misc_feature complement(1721888..1722037) /gene="gyrA" /locus_tag="CMS_1634" /old_locus_tag="CMS1634" /inference="protein motif:HMMPfam:PF03989" /note="HMMPfam hit to PF03989, DNA gyrase C-terminal repeat, beta-propeller, score 0.0008" misc_feature complement(1722578..1723921) /gene="gyrA" /locus_tag="CMS_1634" /old_locus_tag="CMS1634" /inference="protein motif:HMMPfam:PF00521" /note="HMMPfam hit to PF00521, DNA gyrase/topoisomerase IV, subunit A, score 7.1e-250" gene 1724127..1725266 /locus_tag="CMS_1635" /old_locus_tag="CMS1635" /db_xref="GeneID:6158739" CDS 1724127..1725266 /locus_tag="CMS_1635" /old_locus_tag="CMS1635" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710358.1" /db_xref="GI:170782026" /db_xref="GeneID:6158739" /translation="MAPMLPAPGSSRMSLTAVMPGCLAALAGEESEAGLPPVDRAVVV LVDGLGSAALRARAGHARHLVQGWRKKDVVDVGFPTTTAASITSLTTGVRAGEHGLVG YSALDPAHDRVLKLLSGWDARSVPDQWQPVPTAFERAVAAGIPAFVVGSARYAGSGFS RAALRGATYVAAESIADRFATTRELMDREPRALVYLYVPELDQAAHSHGWESDRWLRG LEELDQAAGPFLDRLGPREGALITADHGIVDVPAGSQILFDRVPELVAGVRHVAGEPR CLHLHLEPGADADGLADAWRASEGTRAHVATRAEAIAADWYGPVREGVAARIGDVIVA TRSLIAYYDGRPRDQGARRMIGQHGAFSDEERLVPLIRAGAFARG" sig_peptide 1724127..1724222 /locus_tag="CMS_1635" /old_locus_tag="CMS1635" /note="Signal peptide predicted for CMS1635 by SignalP 2.0 HMM (Signal peptide probability 0.962) with cleavage site probability 0.390 between residues 32 and 33" misc_feature 1724241..1725257 /locus_tag="CMS_1635" /old_locus_tag="CMS1635" /inference="protein motif:HMMPfam:PF01663" /note="HMMPfam hit to PF01663, Type I phosphodiesterase/nucleotide pyrophosphatase, score 1.2e-06" gene complement(1725322..1726521) /locus_tag="CMS_1636" /old_locus_tag="CMS1636" /db_xref="GeneID:6157418" CDS complement(1725322..1726521) /locus_tag="CMS_1636" /old_locus_tag="CMS1636" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710359.1" /db_xref="GI:170782027" /db_xref="GeneID:6157418" /translation="MEPMQDLKIVGVEDGALVVETPGGERHRLVMDDSFRSALRRQSA DGGPPRKAAPRIIQSFIRQGMSAEDVARETGASVEYVRKFEGPVVAEREHVVRSAMKV PVHTAIEVDPMGQGTLFGQVIEERLESLGAQEVRWSSWKEQLGGWVVKAAFTSEEIEH DARWSYDPKKHALSPANNEAITLSQQGEIRGALIPRLRALPPEAPDTHQEDGVTRFDS GAFRLPEPTASSTQDTAPQPWEAHRRDEGASVSHLGRQGNHPAGTQQPARVAQVELNE TADLLEALRRRRGERESVPREDEGDDPVEEAPAPAARRDEPLSRPRGGQRSAPPLRSA VIPGVGRVDTGRDRPRDESDDEGLRTPGTGEGRGSAKPSGRRGRTAMPSWDEIVFGAR SDDDHLA" misc_feature complement(1726264..1726329) /locus_tag="CMS_1636" /old_locus_tag="CMS1636" /note="Predicted helix-turn-helix motif with score 1133.000, SD 3.05 at aa 70-91, sequence MSAEDVARETGASVEYVRKFEG" gene 1726776..1727132 /locus_tag="CMS_1637" /old_locus_tag="CMS1637" /db_xref="GeneID:6157419" CDS 1726776..1727132 /locus_tag="CMS_1637" /old_locus_tag="CMS1637" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710360.1" /db_xref="GI:170782028" /db_xref="GeneID:6157419" /translation="MRFMQTVPADSVRRLFEKWTGMATDYDAPRKTEDDSDSIEALKE RVPDRMSGVVDVDDADNPGSFDLAGADLSDLELETVVLPPQADEFTCVSCFLVKHRSQ IDHQEKLGPICQECAA" gene complement(1727143..1728105) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /db_xref="GeneID:6157420" CDS complement(1727143..1728105) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710361.1" /db_xref="GI:170782029" /db_xref="GeneID:6157420" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1727155..1727697) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.5e-37" misc_feature complement(1727782..1727847) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(1727847..1727968) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(1727968..1728033) /locus_tag="CMS_1638" /old_locus_tag="CMS1638" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(1728274..1728723) /locus_tag="CMS_1639" /old_locus_tag="CMS1639" /db_xref="GeneID:6157421" CDS complement(1728274..1728723) /locus_tag="CMS_1639" /old_locus_tag="CMS1639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710362.1" /db_xref="GI:170782030" /db_xref="GeneID:6157421" /translation="MPASPYSERLWPAPWLFVATALVIPASLLVFLPISVIAGVVVAI VLYAGVVATLVLTSPVIQVVDGRLRAGRASIDVDQLGEPEGFRGAQATAERGTRLHAR AYLVIRGWVDPVVKVPLLDAADPAPYWLLSTRTPERLIAAIRGSRRS" sig_peptide complement(1728361..1728462) /locus_tag="CMS_1639" /old_locus_tag="CMS1639" /note="Signal peptide predicted for CMS1639 by SignalP 2.0 HMM (Signal peptide probability 0.926) with cleavage site probability 0.311 between residues 34 and 35" misc_feature complement(1728556..1728624) /locus_tag="CMS_1639" /old_locus_tag="CMS1639" /note="1 probable transmembrane helix predicted for CMS1639 by TMHMM2.0 at aa 5-27" gene 1728762..1729232 /gene="dut" /locus_tag="CMS_1640" /old_locus_tag="CMS1640" /db_xref="GeneID:6157422" CDS 1728762..1729232 /gene="dut" /locus_tag="CMS_1640" /old_locus_tag="CMS1640" /EC_number="3.6.1.23" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase (dutpase) (dUTP pyrophosphatase)" /protein_id="YP_001710363.1" /db_xref="GI:170782031" /db_xref="GeneID:6157422" /translation="MPDPVDVLIAGDAPIPTYAHPGDAGADLTAAEAVRLEPGRRATV GTGVSIALPDGYAAFVLPRSGLAARHGITIVNAPGTVDAGYRGEIRVTLLNTDAEAAY DVAVGDRIAQVVVMPVSRVRFVPVEKLPGSHRGTGGFGSTGTGALPARDPGDRT" misc_feature 1728792..1729190 /gene="dut" /locus_tag="CMS_1640" /old_locus_tag="CMS1640" /inference="protein motif:HMMPfam:PF00692" /note="HMMPfam hit to PF00692, DeoxyUTP pyrophosphatase,score 6.6e-33" gene 1729229..1729921 /locus_tag="CMS_1641" /old_locus_tag="CMS1641" /db_xref="GeneID:6158672" CDS 1729229..1729921 /locus_tag="CMS_1641" /old_locus_tag="CMS1641" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710364.1" /db_xref="GI:170782032" /db_xref="GeneID:6158672" /translation="MTDENANQPDDAAVADDAEHVLDAKSAPDDRADEGPLDETEANP VRPYVDLGGIKILPREGLHLRLEVAEGTQQVVAIGLDFAESSLQVQPFAAPRSSGLWH EIRTTIGEQIQKQGGTTRLADGPFGPELHAVIPVVQQPGQPAASTREARFIGVDGPRW FLRGVITGRAVSDPEAAAAVEDLFRCVVVVRGSSPMPPRDLIPLKMPAAQVGTTPGAA PAGESPASALGS" gene 1729924..1730730 /locus_tag="CMS_1642" /old_locus_tag="CMS1642" /db_xref="GeneID:6157423" CDS 1729924..1730730 /locus_tag="CMS_1642" /old_locus_tag="CMS1642" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710365.1" /db_xref="GI:170782033" /db_xref="GeneID:6157423" /translation="MSGEDPRERDPRGQPPPADEAAATDGIPGEPASVSASAPGEALG ASMAQAAERAGLGQAARGETMTAAALLTAMGGVRGVLEAIVPGLLFLVAFTLTRDIVL SVAVPVTVAVVAVVARLVQRSAFAPAVGGLVGIVISAVLALRSGEGRDFYALGLWTNG AYFAVLLVSVVVGWPLVGVAVGFLMGDGTAWRQDRRKARALRLLTLVWVGFFALRLAV QLPLYLADSIDALGVARLVMGTPLYGVLLVLSWLFVRAVYAKEPAAPAAG" misc_feature order(1730143..1730211,1730221..1730274,1730293..1730361, 1730404..1730472,1730530..1730589,1730617..1730685) /locus_tag="CMS_1642" /old_locus_tag="CMS1642" /note="6 probable transmembrane helices predicted for CMS1642 by TMHMM2.0 at aa 74-96, 100-117, 124-146,161-183, 203-222 and 232-254" gene 1730910..1733774 /gene="acnA" /locus_tag="CMS_1643" /old_locus_tag="CMS1643" /db_xref="GeneID:6157424" CDS 1730910..1733774 /gene="acnA" /locus_tag="CMS_1643" /old_locus_tag="CMS1643" /EC_number="4.2.1.3" /note="Catalyzes the conversion of citrate to isocitrate" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /protein_id="YP_001710366.1" /db_xref="GI:170782034" /db_xref="GeneID:6157424" /translation="MTGGIDFRAHPAREEGHVSAINSFGAKDTLRVGDTDYEIYRIDT VAGHERLPFSLKVLLENLLRTEDGKNVTGSQISALGDWVPEADPDTEIQFTPARVVMQ DFTGVPCIVDLATMREAVGELGGDPTKINPLAPAELVIDHSVIADLFGSEDALERNVD IEYERNGERYQFLRWGQTAFEDFKVVPPGTGIVHQVNIEHLARVTMTREVGGVLQAYP DTCVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPKVVGFKLSGEIPTGVT ATDVVLTITQMLRKHGVVGKFVEFYGSGVGAVPLANRATIGNMSPEFGSTAAVFPIDD VTLEYLRLTGRSEEQVALVEAYAKQQGLWHDASVEPAFSEYLELDLSTVVPSIAGPKR PQDRIELTDAKSQFERDLNDYAQVDHDIVDLTTSMSFPASDPGELQPEDEHSTHETHH ASHSPVSVTKPTRVTLEDGRDFTLDHGAVAIAAITSCTNTSNPSVMLAAGLLARNASK KGLKAKPWVKTTLAPGSKVVTDYYEKSGLTTYLEDLGFYTVGYGCTTCIGNSGPLLEE ISTAVQDNDLAVTAVLSGNRNFEGRINPDVKMNYLASPPLVIAYALAGSMNFDFDSDA LGTDPEGNEVFLKDIWPDADEVQSTIDSSIDTGMFTHQYAGVFDGDERWRSLPTPTGA TFEWDAESTYVRKPPYFEGLTMEITPVSDIAGARVLAKLGDSVTTDHISPAGSIKADS PAGHYLDEHGVGRKDYNSYGSRRGNHEVMIRGTFANIRLRNQLLDGVEGGYTRDFTQE GGPQSFIYDASENYQAAGTPLVILGGKEYGSGSSRDWAAKGTSLLGVKAVITESFERI HRSNLIGMGVVPLQFPAGETWASLGLDGTEEISISGLEELNSGTTPRTVHVVAAPTSD SPAGKETVEFDAVVRIDTPGEADYYRNGGILQYVLRSLVA" misc_feature 1731117..1732751 /gene="acnA" /locus_tag="CMS_1643" /old_locus_tag="CMS1643" /inference="protein motif:HMMPfam:PF00330" /note="HMMPfam hit to PF00330, Aconitate hydratase,N-terminal, score 6.5e-226" misc_feature 1732344..1732394 /gene="acnA" /locus_tag="CMS_1643" /old_locus_tag="CMS1643" /note="PS00450 Aconitase family signature 1." misc_feature 1733133..1733531 /gene="acnA" /locus_tag="CMS_1643" /old_locus_tag="CMS1643" /inference="protein motif:HMMPfam:PF00694" /note="HMMPfam hit to PF00694, Aconitate hydratase,C-terminal, score 3.2e-53" gene 1733890..1735842 /gene="dxs" /locus_tag="CMS_1644" /old_locus_tag="CMS1644" /db_xref="GeneID:6158588" CDS 1733890..1735842 /gene="dxs" /locus_tag="CMS_1644" /old_locus_tag="CMS1644" /EC_number="2.2.1.7" /note="catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="YP_001710367.1" /db_xref="GI:170782035" /db_xref="GeneID:6158588" /translation="MGILETITGPRDLDRLSREQMVELAAEIRQFLVAEVSKTGGHLG PNLGVVETTLAIHRVFDSPRDAIVFDTGHQSYVHKLVTGRQDFSRLREAGGLAGYPQR SESEHDIVESSHASSSLSWADGISRAFGITGQTDRHVVAVVGDGALTGGMTWEALNNI SDDNTRKLIIVVNDNGRSYAPTIGGMARFLNTVRTRRTYRGLYETSQRVFGVFGAPGD SLYRGLRGGLHGFLTRVTDNEALYSNLDIKYLGPIDGHDQQAMEEALEQARDYGAPVI VHAITEKGRGYEPARRDVADQFHAVGQIDPETGEPIDPSHAVSWTSVFADEILALADE DPRIVGITAAMLRPVGLHKFAEKHPDRVHDVGIAEQHAVTSAAGLAYGGLHPVVALYA TFVNRAFDQVLMDVALHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQIVPHIRLSAP RDATRLREELGEAVKVDDAPTVVRFSKGSVGDEIEAVRRLDDGVDVLHESASKDVLIV TVGPMATMGIEVAERLAAQGIGATVVDPRWVVPVPRSVVELGGTHRLVVTIEDGVVVG GIGTRIRQDLREAGIDTGVTELGLPDEFLDHGTRSQILERVGLTPQHIARDVVAQVLG SRVPSARPLPEDAERVPMRAEDDEQA" misc_feature 1734841..1735335 /gene="dxs" /locus_tag="CMS_1644" /old_locus_tag="CMS1644" /inference="protein motif:HMMPfam:PF02779" /note="HMMPfam hit to PF02779, Transketolase, central region, score 5.7e-53" misc_feature 1735363..1735731 /gene="dxs" /locus_tag="CMS_1644" /old_locus_tag="CMS1644" /inference="protein motif:HMMPfam:PF02780" /note="HMMPfam hit to PF02780, Transketolase, C terminal,score 1.1e-25" gene complement(1735906..1738035) /gene="fadB" /locus_tag="CMS_1645" /old_locus_tag="CMS1645" /db_xref="GeneID:6158674" CDS complement(1735906..1738035) /gene="fadB" /locus_tag="CMS_1645" /old_locus_tag="CMS1645" /EC_number="5.1.2.3" /codon_start=1 /transl_table=11 /product="fatty acid oxidation complex alpha-subunit" /protein_id="YP_001710368.1" /db_xref="GI:170782036" /db_xref="GeneID:6158674" /translation="MTDTSRFRELVALDPDEVVTHSYVRDVPLPSGGVLALVTLDNGR DHTRPSTLGPATLLELADALDGLAARAAAGEIRGVAITGKPFILAAGADLSKVGEIPS REVGRQMAQLGHDTLGRLHRLGVPSFTFINGLALGGGLEIGLNSDYRTVDESVPAVAL PEVFLGIIPGWGGAWLLPNLIGIENALKVIIENPLKNNRTLKAADVVELGIADASFPS ASFLEQSIRWADGVISGAVEVKRPNAPGRLERIAKWDIAIGIARKSLEQRIGTVAQSP YRALDLLKAARNTTREEGFAAEDEALADLISGDQFRATIYAFDLVQKRAKRPAGAPDK ALARKVTKVGVVGAGLMASQFALLFVRRLQVPVVITDLDRARVDAGVAGIHGEIRKLA EKGRISPDEANRLTALVTGTTDKADFADADWVIEAVFEELGVKQAVFAEIEQHVSETA ILATNTSSLSVERIAERLAHPERVVGFHFFNPVAVMPLIEVVRTPQTTDETLSTAMQV ARTLKKHAVITRDTPGFVVNSILAKVLGEAMHAVDTGTPFEVVDRSLAPFGLPMTPFE LLELVGLKVGAHVLDTHHAAFPDRFFESPNLHRLADLGRIYARDAKGRPTGFDKEAVR IVKGGTDPQTAEQIRERVETGLADEVHRMLEDDVVHAAEDIDLCLILGAGYPFQMGGL TPYLDRVGASNRAFGDTFHHPPIRGVA" misc_feature complement(1736185..1736466) /gene="fadB" /locus_tag="CMS_1645" /old_locus_tag="CMS1645" /inference="protein motif:HMMPfam:PF00725" /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA dehydrogenase, C-terminal, score 1.1e-11" misc_feature complement(1736470..1737024) /gene="fadB" /locus_tag="CMS_1645" /old_locus_tag="CMS1645" /inference="protein motif:HMMPfam:PF02737" /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding, score 1.7e-61" misc_feature complement(1737385..1737930) /gene="fadB" /locus_tag="CMS_1645" /old_locus_tag="CMS1645" /inference="protein motif:HMMPfam:PF00378" /note="HMMPfam hit to PF00378, Enoyl-CoA hydratase/isomerase, score 1.2e-11" gene complement(1738032..1739213) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /db_xref="GeneID:6158683" CDS complement(1738032..1739213) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /codon_start=1 /transl_table=11 /product="3-ketoacyl-CoA thiolase" /protein_id="YP_001710369.1" /db_xref="GI:170782037" /db_xref="GeneID:6158683" /translation="MDGVRTPFGRAGEKGMYWRTRADDLVVKAMIGLLERNPQVPKDR IDEVAIAATTQTGDQGLTLGRTAALLVGLPRSVPGFAIDRMCAGAMTSVTATAGGIAF GAYDLAIAGGVEHMGRHPMGFDADPNPRFLAERLVSQDALNMGNTAERIHDRFPALTR ERADRYALASQQKTALAYAAGNIQPDLVPVATRSEEGWGLATRDEAMRPETTLEGLAG LRTPFRPHGRVTAGNSSGLNDGATAALLASGDAVKELGLTPKMTLVSFAFAGVEPEIM GIGPVPSTEKALRKAGLTIDDIGLFELNEAFAIQVLSLLDHFRLDDDDPRVNEYGGAI AVGHPLASSGVRLMNQLARQFEQHPEVRYGLTAMCVGLGQGGSVIWENPHFTGKRKRN K" misc_feature complement(1738068..1738445) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /inference="protein motif:HMMPfam:PF02803" /note="HMMPfam hit to PF02803, Thiolase, score 3e-43" misc_feature complement(1738083..1738124) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /note="PS00099 Thiolases active site." misc_feature complement(1738182..1738232) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /note="PS00737 Thiolases signature 2." misc_feature complement(1738464..1739138) /gene="fadA" /locus_tag="CMS_1646" /old_locus_tag="CMS1646" /inference="protein motif:HMMPfam:PF00108" /note="HMMPfam hit to PF00108, Thiolase, score 1.3e-32" gene complement(1739313..1740644) /locus_tag="CMS_1647" /old_locus_tag="CMS1647" /db_xref="GeneID:6158682" CDS complement(1739313..1740644) /locus_tag="CMS_1647" /old_locus_tag="CMS1647" /note="N-terminal extension relative to homologues predicted by Frameplot" /codon_start=1 /transl_table=11 /product="putative ribonuclease" /protein_id="YP_001710370.1" /db_xref="GI:170782038" /db_xref="GeneID:6158682" /translation="MTARARTRTRRTEPAQATENAPAAADPVPRDDDAPSRPPLREAA ATGDLTVIDTREEYLRAVEAIAAGTGPIAVDAERASGFRYSQRAYLIQVFRRGAGTFL FDPPAIGDFSELDEVIRDVEWVLHAASQDLACLREVGLDPQRIFDTELASRLLGLPRV GLGTVVEELLGIHLAKEHSAADWSTRPLPRAWLVYAALDVELLVDVRDEIARRLEEQG KTAIAEQEFAATIAKEAKPARVEPWRRLSGLHGVRGGRGLAVAKELWEARDAYAREVD TSPGRLVPDGSLVAVARILPQTKRDLAAVREFSGRASRSEIDRWWAAVERGLAATAFP QLRGTGETMPPPKAWADKDPAADRRLKRARVAVQDVATAMGVPQENLLTPEVLRRVAW TPPAELSPEAVATALESWGARPWQIEATAAPVAAAFVDAGQADDETDDGAS" misc_feature complement(1739649..1739885) /locus_tag="CMS_1647" /old_locus_tag="CMS1647" /inference="protein motif:HMMPfam:PF00570" /note="HMMPfam hit to PF00570, HRDC, score 4.5e-07" misc_feature complement(1740000..1740500) /locus_tag="CMS_1647" /old_locus_tag="CMS1647" /inference="protein motif:HMMPfam:PF01612" /note="HMMPfam hit to PF01612, 3'-5' exonuclease, score 7.4e-46" gene complement(1740785..1741291) /locus_tag="CMS_1648" /old_locus_tag="CMS1648" /db_xref="GeneID:6157425" CDS complement(1740785..1741291) /locus_tag="CMS_1648" /old_locus_tag="CMS1648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710371.1" /db_xref="GI:170782039" /db_xref="GeneID:6157425" /translation="MLTEIPSPSSNLAPYAVALAADVSPSGHASDSELGTGRFILLHD PDEPDAWGGAFRVVCFAQAPLETDMGTDPFLADVAWSWLVDGLASRGARYSSPSGTAT RIISTGYGELARQGSGAKIELRASWTPADADVTAHVEGWGELLCMLAGLPPAGEGVTL LSARRTRT" gene complement(1741472..1742218) /locus_tag="CMS_1649" /old_locus_tag="CMS1649" /db_xref="GeneID:6157426" CDS complement(1741472..1742218) /locus_tag="CMS_1649" /old_locus_tag="CMS1649" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710372.1" /db_xref="GI:170782040" /db_xref="GeneID:6157426" /translation="MRITRILPVAGAGHAAASRGLDDDGTRGWLEDLYRPGSADHVRL NFVASVDGSVIGADGTSDSLSSVVDRRILGVIRELADVVLVGAGTVRAERYVLPRRTP LAVATSSGDLEGHRFDQDASPGRLLVLCPPEARDRAVASLGGVPAEIVSVPLGAAADG RMGGDDVVDALRGRGLTHVVCEGGPALAASLIAAGRVDELCLTTSPELVTPLTPLVPA GSDAYAPMRLDQLLVDDDHRTYARWTVRRD" misc_feature complement(1741499..1742101) /locus_tag="CMS_1649" /old_locus_tag="CMS1649" /inference="protein motif:HMMPfam:PF01872" /note="HMMPfam hit to PF01872, Bacterial bifunctional deaminase-reductase, C-terminal, score 1.8e-08" gene complement(1742215..1742655) /locus_tag="CMS_1650" /old_locus_tag="CMS1650" /db_xref="GeneID:6157427" CDS complement(1742215..1742655) /locus_tag="CMS_1650" /old_locus_tag="CMS1650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710373.1" /db_xref="GI:170782041" /db_xref="GeneID:6157427" /translation="MTDAPGLPAALAEIRDDFLALEQRDRLLLLLDFSNELPALPPRY ADHPDLLERVEECQSPVFMFVEVVDGDVHVHAQAPAEAPTSRGFASILAQGLDGLPAD EVLAVPDDYPSTIGLDAAVSPLRMRGMTAMLGRVKRQVRERLAG" misc_feature complement(1742233..1742616) /locus_tag="CMS_1650" /old_locus_tag="CMS1650" /inference="protein motif:HMMPfam:PF02657" /note="HMMPfam hit to PF02657, Fe-S metabolism associated SufE, score 2.9e-24" gene complement(1742652..1743563) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /db_xref="GeneID:6157428" CDS complement(1742652..1743563) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /EC_number="2.8.1.1" /codon_start=1 /transl_table=11 /product="putative thiosulfate sulfurtransferase" /protein_id="YP_001710374.1" /db_xref="GI:170782042" /db_xref="GeneID:6157428" /translation="MAVEPDTTPRFAEYAHPERLVSGDWLQERLADGALTPGLVVVES DEDVLLYETGHIPGAVKLDWHTDLNDPVQRDYVDGERFAQLMSERGIARDSTVVIYGD KSNWWAAYALWVFTLFGHEDVRLLDGGRDKWIAEGRPTTTDRPEVSPVEYPVVERRDE EIRAFKDDVLAHLGNPLIDVRSPEEYTGQRTTAPAYPEEGSLRAGHIPTSRNVPWAKA AAEDGSFRTRAELDAVYREGAGLGDGDDVVVLCRIGERSSHTWFVLTHLLGFEGVRNY DGSWTEWGSAVRVPIVQGAEPGELPAR" misc_feature complement(1742706..1743071) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 1.2e-21" misc_feature complement(1742715..1742747) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /note="PS00683 Rhodanese C-terminal signature." misc_feature complement(1743156..1743500) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 4.3e-26" misc_feature complement(1743378..1743413) /gene="thtR" /locus_tag="CMS_1651" /old_locus_tag="CMS1651" /note="PS00380 Rhodanese signature 1." gene 1743732..1744796 /locus_tag="CMS_1652" /old_locus_tag="CMS1652" /db_xref="GeneID:6159017" CDS 1743732..1744796 /locus_tag="CMS_1652" /old_locus_tag="CMS1652" /codon_start=1 /transl_table=11 /product="putative ATPase" /protein_id="YP_001710375.1" /db_xref="GI:170782043" /db_xref="GeneID:6159017" /translation="MTNADIGSRSHDAEGTGPGALVGRSPSITGAEIAAHLVPPRQFD EARFDTYRPDPEYDTQAQAVEVLRAFSGDRAGSRGGLFSRRKAPALKPGVYLDGGFGV GKTHLLASLWHAMPGPKYFGTFIEYTALVGALGYQGAVGILRGATLVAIDEFELDDPG DTMMMTRLLSDLVADGTRIAATSNTPPNALGEGRFAAADFLREIQAMSDRFDTIRIDG LDYRRRAFEGHAITVGAAELDARADAAQAGGRSVTVDGFPELVAHLSRLHPSKYVKVI EGVDAIALRDVTQLQGQTDALRFVAFVDRVYDAQIPLLASGTPFDEAFSAEMLAGGYR KKYLRAISRLISLTAAGRDL" misc_feature 1743822..1744790 /locus_tag="CMS_1652" /old_locus_tag="CMS1652" /inference="protein motif:HMMPfam:PF03969" /note="HMMPfam hit to PF03969, AFG1-like ATPase, score 1.5e-60" misc_feature 1744023..1744046 /locus_tag="CMS_1652" /old_locus_tag="CMS1652" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1745048..1746334 /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /db_xref="GeneID:6157429" CDS 1745048..1746334 /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /codon_start=1 /transl_table=11 /product="putative ammonium transporter" /protein_id="YP_001710376.1" /db_xref="GI:170782044" /db_xref="GeneID:6157429" /translation="MDQGNTAFLLIAAALVLLMTPGLAFFYGGLVKAKSVISMMMMSF GAMGLIGLLWVLYGYAIAFGNGPDGAAGNPRFVGIDGVLGIDLGQLGLGDAYTAALGD QTSAYPTLAFAAFQATFAIITVALISGAIADRAKFGAWMVFAGIWATVVYFPVASWVF NFTVADGSTVDGGWIAYNVGAIDFAGGTAVHINAGAAALALSLVLGKRVGFAKGMHVP HNPPFVLLGAGLLWFGWFGFNAGSELAADGIAAIAFLNTIAAPAAAILGWLVVEKIRD GKPTSVGAASGAVAGLVAITPACAALSPTWAIVLGLVAGAVCAVAIELKFKLGFDDSL DVVGIHLIGGLIGTLYIGIFATKVGLIYSGSLEQLGKQALAAFAVLIYSFVLSYVIGT IIQKTMGFRVKNEDEIAGIDTIVHGEEGYVLETSGR" sig_peptide 1745048..1745146 /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /note="Signal peptide predicted for CMS1653 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.946 between residues 33 and 34" misc_feature order(1745063..1745131,1745168..1745236,1745372..1745440, 1745459..1745527,1745597..1745665,1745702..1745761, 1745789..1745857,1745891..1745950,1745960..1746019, 1746053..1746121,1746164..1746232) /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /note="11 probable transmembrane helices predicted for CMS1653 by TMHMM2.0 at aa 6-28, 41-63, 109-131, 138-160,184-206, 219-238, 248-270, 282-301, 305-324, 336-358 and 373-395" misc_feature 1745066..1746310 /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /inference="protein motif:HMMPfam:PF00909" /note="HMMPfam hit to PF00909, Rh-like protein/ammonium transporter, score 4.6e-147" misc_feature 1745594..1745671 /locus_tag="CMS_1653" /old_locus_tag="CMS1653" /note="PS01219 Ammonium transporters signature." gene 1746528..1747367 /locus_tag="CMS_1654" /old_locus_tag="CMS1654" /db_xref="GeneID:6157430" CDS 1746528..1747367 /locus_tag="CMS_1654" /old_locus_tag="CMS1654" /codon_start=1 /transl_table=11 /product="putative aldo/keto reductase" /protein_id="YP_001710377.1" /db_xref="GI:170782045" /db_xref="GeneID:6157430" /translation="MASPLITLNNGVTIPQLGFGVFQTPPAETQQAVERAFEAGYRHI DTAAGYYNEEGVGAAIKATGIPREELFITTKLRNGDQGADSARTAFEDSRRKLGVDAV DLYLIHWPYPKHGLYVETWKTFEALHAEGLIRAIGVSNFLPEHLEKLAAESEVVPAVN QIEVHPTFQQHDLSTFSVERGIEVEAYSPLGQGADLESEIVTRLAKEHDATPAQIVLA WHLAQGRIVIPKSVTPERIVANFQSIEVELSVEELAEIDTLESGTRLGADPATADFTQ FPS" misc_feature 1746624..1747310 /locus_tag="CMS_1654" /old_locus_tag="CMS1654" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 1e-87" misc_feature 1746645..1746698 /locus_tag="CMS_1654" /old_locus_tag="CMS1654" /note="PS00798 Aldo/keto reductase family signature 1." misc_feature 1746897..1746950 /locus_tag="CMS_1654" /old_locus_tag="CMS1654" /note="PS00062 Aldo/keto reductase family signature 2." gene 1747709..1747993 /locus_tag="CMS_1655" /old_locus_tag="CMS1655" /pseudo /db_xref="GeneID:6157431" gene 1748035..1748859 /locus_tag="CMS_1656" /old_locus_tag="CMS1656" /db_xref="GeneID:6157432" CDS 1748035..1748859 /locus_tag="CMS_1656" /old_locus_tag="CMS1656" /codon_start=1 /transl_table=11 /product="HemK family methyltransferase" /protein_id="YP_001710378.1" /db_xref="GI:170782046" /db_xref="GeneID:6157432" /translation="MERLRAAGCVFAEEEAALLIREATARHPDAGPGGSGDARAATLT AMTAARVAGEPLETVLGWVAFAGRRIIVRPGVFVPRRRTEQLAGAAVEAAAQATRRTG HAVVVDMCCGSGAIGAVVADEVPGAVLHAADVDPAAVACAAENLVPRGAAVHRGDLMA ALPPELRGRIDVLVANVPYVPRVGLALMPPEARLHEPEVTRDGGEDGLDVLRRVAAEG REWLAPTGTVLVEVADAQVTGALQAMRAAGLVARTEDAEAEVEDDQTRVVSGRPAG" gene 1749215..1750177 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /db_xref="GeneID:6157433" CDS 1749215..1750177 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /note="Nu/R/C?" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710379.1" /db_xref="GI:170782047" /db_xref="GeneID:6157433" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 1749287..1749352 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 1749352..1749473 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 1749473..1749538 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 1749623..1750165 /locus_tag="CMS_1658" /old_locus_tag="CMS1658" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene 1750224..1750727 /locus_tag="CMS_1659" /old_locus_tag="CMS1659" /db_xref="GeneID:6157434" CDS 1750224..1750727 /locus_tag="CMS_1659" /old_locus_tag="CMS1659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710380.1" /db_xref="GI:170782048" /db_xref="GeneID:6157434" /translation="MSRMDWREDRIGSARRGENPTVLAELGAGWAVIGDVQFLPGYCV LLGTDPTATAFAEMPRAERVRFLADADLLATAVERACRDLVPGFRRVNIEVLGNADAF VHAHVWPRYAWEPPELVARPVWLHAAERWRDPATALGDGHAELRARIRAELHVLARDE AVEVRAR" gene complement(1750714..1751721) /locus_tag="CMS_1660" /old_locus_tag="CMS1660" /db_xref="GeneID:6157435" CDS complement(1750714..1751721) /locus_tag="CMS_1660" /old_locus_tag="CMS1660" /codon_start=1 /transl_table=11 /product="putative substrate binding transport protein" /protein_id="YP_001710381.1" /db_xref="GI:170782049" /db_xref="GeneID:6157435" /translation="MSPLPRSARLRRALGVPALVAAALATLTGCGLQPATAYVPDTAP GSIQPLDLPAGAHLTVTSKNFTEQLILGKIAVIAAKAAGFDVTDQTNVPGSVPARELM TSHGADMTWEYTGTAWLSYLGEPKGIPDQRAQYEAVRDADAANGLTWLTPAPLNNTYA LAIRSEEADRLGITKLSQIKDLPVDERTFCVEAEFNSRSDGLSPLLETYGIPRGSADG VPDGNVSIFDTGAVYTATDRGTCEFGEVFTTDGRIDKLGLTILQDDLGFFPAYNLAPV LDSATLAEYPGLQDVFDRISPVITDDALREMNLRVDDQGEEPADVAFQFMVDHGFVTA P" sig_peptide complement(1750714..1750824) /locus_tag="CMS_1660" /old_locus_tag="CMS1660" /note="Signal peptide predicted for CMS1660 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.579 between residues 37 and 38" misc_feature complement(1750723..1751553) /locus_tag="CMS_1660" /old_locus_tag="CMS1660" /inference="protein motif:HMMPfam:PF04069" /note="HMMPfam hit to PF04069, Substrate-binding region of ABC-type glycine betaine transport system, score 1.8e-40" misc_feature complement(1751632..1751664) /locus_tag="CMS_1660" /old_locus_tag="CMS1660" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(1751724..1752398) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /db_xref="GeneID:6157436" CDS complement(1751724..1752398) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /codon_start=1 /transl_table=11 /product="putative ATP-binding integral membrane transport protein" /protein_id="YP_001710382.1" /db_xref="GI:170782050" /db_xref="GeneID:6157436" /translation="MLGAYLVWLAVAPLTAVERTTLAPAALGKSTLEHLALTFSAAAI VLVIAIPLGVLMTRGRLRRFSPPVLAVANFGTAAPAIGLVVLLAMLVPNGFVASLVAL VVYAALPVLGNTILGIRGVDERLVEAGRGMGMSRAAVLFRIELPLAVPVMLAGIRTAL VLLVGTAALAAFVNGGGLGILITTGVNLYLYPVLVSGALLIALLALAIDWLGRVVEHV ARPKGL" misc_feature complement(1751736..1752308) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.6e-24" misc_feature complement(order(1751766..1751834,1751853..1751921, 1751931..1751987,1752048..1752116,1752126..1752194, 1752231..1752299)) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /note="6 probable transmembrane helices predicted for CMS1661 by TMHMM2.0 at aa 34-56, 69-91, 95-117, 138-156,160-182 and 189-211" misc_feature complement(1751961..1752047) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." misc_feature complement(1752309..1752332) /locus_tag="CMS_1661" /old_locus_tag="CMS1661" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1752485..1753639) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /db_xref="GeneID:6157437" CDS complement(1752485..1753639) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001710383.1" /db_xref="GI:170782051" /db_xref="GeneID:6157437" /translation="MLVGPSGCGKTTTLKMINRLIEPTEGRVVLGDEDVTGIDGDELR RRIGYVIQAGGLFPHMTVAANIAVVPKMLGWEAARIRARVDELLELVSLDPEQYRDRY PKELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDELIRIQAELQKTIV IVTHDFDEAVKLGDWIVVFAEGARIVQYDTPERILAEPADAFVEEFIGSGAGLKQLTL RRVDEVPLADAVIAYPGDQARDVLARMDEVGHQHAVVVDARERPIQWPSRRQLGRIDV IGAVPEPRLPVIGARATLNDALDTMLVSSAGAALVTGRGGAFLGVIDVETVMDAITSA RASAAGGVDGAPVGTNTGTIGTVGADAARAEQSAGSVAPESPAARDGQAG" misc_feature complement(1752644..1752805) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 0.00082" misc_feature complement(1752812..1752973) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 0.38" misc_feature complement(1753094..1753636) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.5e-60" misc_feature complement(1753280..1753324) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /note="PS00211 ABC transporters family signature." misc_feature complement(1753607..1753630) /locus_tag="CMS_1662" /old_locus_tag="CMS1662" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1753767..1754408) /locus_tag="CMS_1663" /old_locus_tag="CMS1663" /db_xref="GeneID:6157438" CDS complement(1753767..1754408) /locus_tag="CMS_1663" /old_locus_tag="CMS1663" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710384.1" /db_xref="GI:170782052" /db_xref="GeneID:6157438" /translation="MWDFLSSRADQIAFSAWQHLSLVVQCLVLATVIAVGIAALVYRS RPLSSLANSVSAIGLTLPAFALVGLLIAPLGFGVAPAIAVVTFFAVLPILRNAVVGLT GIDPSIVESARGIGMGRVRTLLRVELPLAWPVILGGIRVSAQMVMGIAAVAAYVLGPG LGGFIFSGLSRLGGANSTESVLTGVIGVVLLALLLDLVLVGIGRLTTPRGIRV" misc_feature complement(1753773..1754363) /locus_tag="CMS_1663" /old_locus_tag="CMS1663" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.7e-14" misc_feature complement(order(1753803..1753871,1753899..1753967, 1754115..1754183,1754196..1754264,1754283..1754351)) /locus_tag="CMS_1663" /old_locus_tag="CMS1663" /note="5 probable transmembrane helices predicted for CMS1663 by TMHMM2.0 at aa 20-42, 49-71, 76-98, 148-170 and 180-202" misc_feature complement(1754022..1754108) /locus_tag="CMS_1663" /old_locus_tag="CMS1663" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 1754660..1756000 /locus_tag="CMS_1664" /old_locus_tag="CMS1664" /db_xref="GeneID:6157439" CDS 1754660..1756000 /locus_tag="CMS_1664" /old_locus_tag="CMS1664" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710385.1" /db_xref="GI:170782053" /db_xref="GeneID:6157439" /translation="MPVPSRDADAYAVLGVEPSASQDEIRRAYRRRVRDAHPDMGGSA DEFQAVRDAFEAVGDPESRARYERTLREAPAPEDPVGRAHPASPGSSSTGDAWDPASR RGRPGAPRERPAARTRSFGHPGGFARLRYLSLVREWLADPEEPSVPAAPVPPRGGRAL SDRPEPYVRRARAIAPPVVAVLLALVILVSGLGALAAAVGLVGGAAAGLVAAGPLGRA WFRAEEPRRHAAEQLQTDVLAHERAVRAYPDLMAAYSARLARLEGLRRRFEADAYAPD LVAEVPPAASEALRAAVAQEETARELMELGPSYAFWNGVAVPRSGDAIDHLVLGPQGL VAVESVPGGSAAATDPSARDAVLRGLDGRARALAREMDVPVVGLVLSLPSGVLGAAPV VLHAADDPHALPAYAVARTLLADHVAAGLPGLRAMDAERLLAVRTRLVLDARFV" misc_feature 1755191..1755259 /locus_tag="CMS_1664" /old_locus_tag="CMS1664" /note="1 probable transmembrane helix predicted for CMS1664 by TMHMM2.0 at aa 139-161" gene complement(1756040..1757005) /locus_tag="CMS_1665" /old_locus_tag="CMS1665" /db_xref="GeneID:6157440" CDS complement(1756040..1757005) /locus_tag="CMS_1665" /old_locus_tag="CMS1665" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710386.1" /db_xref="GI:170782054" /db_xref="GeneID:6157440" /translation="MRVVVIGATGHIGTFLVPRLVDSGHDVVAVSRGTREPYRQSPLW DRVERVRVDRDAEDAAGTFADRIAALAPEVVVDLVCFTPASARHLVEGLRGRVRHLVH IGSIWTHGLSTALPLREDDPKEPFGEYGVQKAEIERYLIAESRGGGLQCTVVHPGHIS GGGWPVITPVGNLDPAVWTALAAGDPLAVPGSGSETMHHVHADDVAQVVQLAIANRET SVGESFHAVSDRALSVRGFARAAAAWFGREPELEHLDWDGFRARTEPDHADASWQHLS RSHVASIDKARDVLGYVPRYTSEEAAREAVEWMVRAGELDVPLPR" gene complement(1757050..1758066) /locus_tag="CMS_1666" /old_locus_tag="CMS1666" /db_xref="GeneID:6157441" CDS complement(1757050..1758066) /locus_tag="CMS_1666" /old_locus_tag="CMS1666" /codon_start=1 /transl_table=11 /product="putative metal ion transport protein" /protein_id="YP_001710387.1" /db_xref="GI:170782055" /db_xref="GeneID:6157441" /translation="MTVVDSAVYVDGVRTADPESLDETFEVMRARQGLAWIGLYRPDP EELHRVADEFGLHPLAVEDALSGHQRSKMERYGDTWFVVLRPARYLDADERVEFGELH VFVGPDFVVTIRHAESPDLSAVRHRLQEDRELLALGPRAVMYAILDQVVDEYGPVASG LEDDVDEVEDQIFGADPDVSRRIYALMREVTAFQRATAPLGSILDDLRQRAEEHDVDL ELRRGYRDVHDHVIRVAERADAFRTLLQNALTVHTTLVGQRQNDEMKKLTETSLAQND QVKRISSWAAILFAPTLVGTIYGMNFVNMPELKWTYGYPLALGLMVLMGVILYAAFRK RGWI" misc_feature complement(1757053..1757976) /locus_tag="CMS_1666" /old_locus_tag="CMS1666" /inference="protein motif:HMMPfam:PF01544" /note="HMMPfam hit to PF01544, Mg2+ transporter protein,CorA-like, score 4.1e-48" misc_feature complement(order(1757071..1757139,1757167..1757226)) /locus_tag="CMS_1666" /old_locus_tag="CMS1666" /note="2 probable transmembrane helices predicted for CMS1666 by TMHMM2.0 at aa 332-351 and 361-383" gene complement(1758193..1758278) /locus_tag="CMS_r028" /old_locus_tag="CMSr028" /db_xref="GeneID:6157442" tRNA complement(1758193..1758278) /locus_tag="CMS_r028" /old_locus_tag="CMSr028" /product="tRNA-Leu" /db_xref="GeneID:6157442" gene 1758392..1759702 /locus_tag="CMS_1667" /old_locus_tag="CMS1667" /db_xref="GeneID:6159048" CDS 1758392..1759702 /locus_tag="CMS_1667" /old_locus_tag="CMS1667" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710388.1" /db_xref="GI:170782056" /db_xref="GeneID:6159048" /translation="MTDTLPDDLDATARVARDLIRFDTTNHGEGRSEGETEAAEYVEQ HLKDLGLTPELIDAAPGRTSVLARIPGRNRDKPALVVHGHLDVVPADPANWTVDPFAG VIKDGMLWGRGAVDMKNMDAMMITALQEIITSGRAPERDLIMGFFSDEEAGGVLGSAY VVENRPEWFAGATEAISEVGGYSIDLAGKRAYLLQTGEKALVWIRLVATGTAGHGSQV NRDNAVTRLAGAVARIGMEEWPVHLTDTTRQLLDEIARIVGADPKQVTPDDLAIATGT ASKFIAATLRTTTNPTLLRAGYKHNVIPDTAEALIDIRVLPGEEDAVLARVRELAGEG VEVRIVHQDVGLENPFEGPLVEAMVATLGAHDPEAEVLPYMLSGGTDNKALSLLGITG YGFAPLKLPASMDFPSMFHGVDERVPLDALVFGRQVLRDLLLNY" misc_feature 1758629..1759696 /locus_tag="CMS_1667" /old_locus_tag="CMS1667" /inference="protein motif:HMMPfam:PF01546" /note="HMMPfam hit to PF01546, Peptidase M20, score 1.9e-23" misc_feature 1758977..1759408 /locus_tag="CMS_1667" /old_locus_tag="CMS1667" /inference="protein motif:HMMPfam:PF07687" /note="HMMPfam hit to PF07687, Peptidase dimerisation domain, score 2.9e-15" gene 1759844..1760563 /locus_tag="CMS_1668" /old_locus_tag="CMS1668" /db_xref="GeneID:6157443" CDS 1759844..1760563 /locus_tag="CMS_1668" /old_locus_tag="CMS1668" /EC_number="3.6.1.27" /note="phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate phosphatase" /protein_id="YP_001710389.1" /db_xref="GI:170782057" /db_xref="GeneID:6157443" /translation="MGGDPGATFTAITQLGTELAVIVFFRKRIGKVLSAWFRSLRGGM PKGDPDVRMGWLVIIGTIPIGIAGYLFQDTIRTTFRSLWIVAIVLIVFGILLGLADRF SRSDRLEKDMTYGHGVSIGIAQALALVPGVSRSGATTTAARAFGYSRPVAAEYSFLLA VPAVFGSGLYELVKSFDETGQAGAGQTAVATLIAFVVGLAVIAGLMRYISTRTFMPFV VYRVALGVVLLVLLGTGAIAA" misc_feature 1759844..1760527 /locus_tag="CMS_1668" /old_locus_tag="CMS1668" /inference="protein motif:HMMPfam:PF02673" /note="HMMPfam hit to PF02673, Bacitracin resistance protein BacA, score 6.7e-72" misc_feature order(1760000..1760059,1760078..1760137,1760180..1760239, 1760294..1760362,1760405..1760473,1760492..1760557) /locus_tag="CMS_1668" /old_locus_tag="CMS1668" /note="6 probable transmembrane helices predicted for CMS1668 by TMHMM2.0 at aa 53-72, 79-98, 113-132, 151-173,188-210 and 217-238" gene 1760628..1761857 /gene="cysS" /locus_tag="CMS_1669" /old_locus_tag="CMS1669" /db_xref="GeneID:6157444" CDS 1760628..1761857 /gene="cysS" /locus_tag="CMS_1669" /old_locus_tag="CMS1669" /EC_number="6.1.1.16" /note="catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="YP_001710390.1" /db_xref="GI:170782058" /db_xref="GeneID:6157444" /translation="MFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAF DTLQRVWLDRGYDVAYVQNVTDVDDPLLERATATGVDWRDLAAEQVELFRTDMEALRI LPPDSYVGVTEVVDEVASAVAELVRRGTAYPVATPDAVVAGAQDLYFDVARAGEDGPW ALGDESGYDLDTMAALSAERGGDPERPGKRDPLDPLLWRAERAGEPAWDSVVGRGRPG WHIECAVIALRKLDRPVTVQGGGSDLIFPHHEMSAGHAAALTGEDFACVYAHSGMVAY QGEKMSKSLGNLVLVSRLRAAGVDPRAIRLALLAQHYRADWEWTDELLAESVARLAAW DAWAAAADASATAGADAGEPGELVQLVRERLSEDLDTPGAILLLDLRVATGVPATPVE LAAVDALLGVRLGSPAA" misc_feature 1760658..1761614 /gene="cysS" /locus_tag="CMS_1669" /old_locus_tag="CMS1669" /inference="protein motif:HMMPfam:PF01406" /note="HMMPfam hit to PF01406, Cysteinyl-tRNA synthetase,class Ia, score 2.2e-81" gene complement(1761952..1762911) /locus_tag="CMS_1670" /old_locus_tag="CMS1670" /db_xref="GeneID:6158651" CDS complement(1761952..1762911) /locus_tag="CMS_1670" /old_locus_tag="CMS1670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710391.1" /db_xref="GI:170782059" /db_xref="GeneID:6158651" /translation="MADAERFVSGRLLVVAFEGWNDAGEAASGAVRALKELLDLEAVS SVDPEDYFDFQFNRPTIGFAEDGTRELEWPGATLYGPKDPRRPAQDLAADAQLGVSGD NGGSIHLLLGVEPSRHWTAFTTEVLDAARAAGVEGVVLLGALLADVPHTRPISVYSTS ENAAVRAELGIERSTYEGPVGILSIIAQRAEEMGMPTVSLWASVPHYVHSAPSPKATL ALIDKLEEMVDVVIPRGELIQEAATWEAGIDQLAGEDEDMASYIQQLEQARDTVDSPE ASGEAIAQEFEKYLRRGDGPRGRGDERPEEPWRPKDPKDPKDQ" misc_feature complement(1762096..1762887) /locus_tag="CMS_1670" /old_locus_tag="CMS1670" /inference="protein motif:HMMPfam:PF01908" /note="HMMPfam hit to PF01908, Protein of unknown function DUF75, score 1.2e-45" gene 1763004..1763702 /locus_tag="CMS_1671" /old_locus_tag="CMS1671" /db_xref="GeneID:6157445" CDS 1763004..1763702 /locus_tag="CMS_1671" /old_locus_tag="CMS1671" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710392.1" /db_xref="GI:170782060" /db_xref="GeneID:6157445" /translation="MISNRPAAVLWDMDGTIVDTEPYWMVAEEALVGSFGGTWTHEDG LRLVGNGLDDSARILQKAGVDLPAAEIIDRLSDRVMEQILVEVPWRPGARELLREIRE AGIPTALVTMSIGRMARQVADAVPFDAFDHVVAGDDVARSKPHPEAYLTAAGLLGVDI RDCVAIEDSVPGVASATASGATVVAVPHHVPLPADDAYVLWDTLAGRTLADVEAAHAD RRGTAAPIRDEVRA" misc_feature 1763040..1763570 /locus_tag="CMS_1671" /old_locus_tag="CMS1671" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 5.2e-23" gene 1763699..1764763 /locus_tag="CMS_1672" /old_locus_tag="CMS1672" /db_xref="GeneID:6157446" CDS 1763699..1764763 /locus_tag="CMS_1672" /old_locus_tag="CMS1672" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="YP_001710393.1" /db_xref="GI:170782061" /db_xref="GeneID:6157446" /translation="MTVDTAAARFSGPFRAGDRVQLTGPKGRLNTILLEPGKVFHTHR GMIDHDDLIGLPDGSVVKNSAGIECLALRPLLSDVVMSMPRGAAIIYPKDAAQILGLA DVFPGATVVEAGVGSGALSMWLLRALGPTGTLLSFERREEFADVARGNVSSYFGHSPE NWSITLGDLAEALPTVTEPHSVDRVILDMLAPWECVDAVAEALTPGGVLLCYVATVTQ LSRVAEALRDSGLFTNPDASETMIRGWHVEGLAVRPEHRMIGHTGFLITARRLAPGSV LPQLKRRASKSDFSDEDMEAWTPGSLGERRVSDKVLRKRVRIAEHGAELAGARDAAES GDGAVPDDATAAPEPGDPTA" gene 1764825..1765868 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /db_xref="GeneID:6157447" CDS 1764825..1765868 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /codon_start=1 /transl_table=11 /product="putative exported ATP-binding protein" /protein_id="YP_001710394.1" /db_xref="GI:170782062" /db_xref="GeneID:6157447" /translation="MRRSAALTVCAGLVLTLAACSPSGSGSDAAEGCTPLAQAGTSSS TVTATGDVGSAPASVTFPTPLKPSGVEVSTIVEGDGARVQPHQGITAAASIVDGKTGK DLADYARIAPNARTTGSPLFTPASLHESLPYLEDAMTCMPVGSRLAVTVPVSTVFPGQ DLSAQGLAATDGLVLIVDITSSFPEKATGEPRPAQAGFPSVVTTDDGVPGITIPPSTP PTEYRDALLRAGDGAEVGDGDTVTLQYTGVVWGTSTSAEKQAVFGSSWTGGGPLQVPA TATTSAPSTGAASSLVVTPGLAKALVGKHVGDQVIAVVPPGDGFGDQASAKVPAGSTL VYVVDILGTSTTK" sig_peptide 1764825..1764911 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /note="Signal peptide predicted for CMS1673 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.562 between residues 49 and 50" misc_feature 1764852..1764884 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 1765101..1765124 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1765512..1765847 /locus_tag="CMS_1673" /old_locus_tag="CMS1673" /inference="protein motif:HMMPfam:PF00254" /note="HMMPfam hit to PF00254, Peptidylprolyl isomerase,FKBP-type, score 3.7e-14" gene 1765893..1766924 /locus_tag="CMS_1674" /old_locus_tag="CMS1674" /db_xref="GeneID:6157448" CDS 1765893..1766924 /locus_tag="CMS_1674" /old_locus_tag="CMS1674" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710395.1" /db_xref="GI:170782063" /db_xref="GeneID:6157448" /translation="MHRREEHRVPETSRRPTVPVEERLFSLVLALLATEQGLTKNEVL SSVQGYRQRYRAGGDNANLERQFERDKDDIRDLGVPLETVEPPGQEGNNQLLRYRIPR GAYELPADLSFTPEETTLLNLAAMVWREGSLSGESRRALIKLWSLGVESDDPVIGYAP RVRTREAAFAPLSVALERHVLVSFGYLKPGERAARIRTVAPLALVQHQGRWHLHGIDQ DADGPRTFLLSRIVDRVRVTSRAFVPEGEDHAERALADLDRVWANGVGEVAVAPGSDA DIRLRRRRGTEDLGDGRLRVHYSDTNLFADEVAGLGPEARVIAPPKLRDAVRARLAET IAAHREDAS" gene 1766921..1767910 /locus_tag="CMS_1675" /old_locus_tag="CMS1675" /db_xref="GeneID:6157449" CDS 1766921..1767910 /locus_tag="CMS_1675" /old_locus_tag="CMS1675" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710396.1" /db_xref="GI:170782064" /db_xref="GeneID:6157449" /translation="MTDRAAPLQAQDKLAFLLALVPYLTDHGRVSVSQAAAHFRVPPE QIRQAVRLIAVSGVPGSTSSYQHGDLFDIAWDDFEDNDQIVITHMVAIDDSPRFSARE AAALIAGLQYVSSQADASDLDLVGQLMAKLARGSSAQPSQVAVAAGAGDGTREDLRRA IADERRVEFDYRSPRGGTERRVVDPLRLESMDEDWYLRGWDLARGAVRTFRLDRLDEL VVTDLPPEHRPQDVVLGDTLFEPSPDDLRVTLEVAESALPLLGDFVGDERPEPVAGRP GRVAVTVRVAHYQGLVRLVAGMAGVVVVTSPPEARAAVAEWAERAAAAYEDAD" misc_feature 1767008..1767073 /locus_tag="CMS_1675" /old_locus_tag="CMS1675" /note="Predicted helix-turn-helix motif with score 1191.000, SD 3.24 at aa 30-51, sequence VSVSQAAAHFRVPPEQIRQAVR" gene 1768101..1768466 /gene="tatA" /locus_tag="CMS_1676" /old_locus_tag="CMS1676" /db_xref="GeneID:6157450" CDS 1768101..1768466 /gene="tatA" /locus_tag="CMS_1676" /old_locus_tag="CMS1676" /codon_start=1 /transl_table=11 /product="Sec-independent protein translocase protein TatA" /protein_id="YP_001710397.1" /db_xref="GI:170782065" /db_xref="GeneID:6157450" /translation="MNHMLGNLTGWHLVIILVVIVLLFGSTKLPALAKSVGQSMRIFK GEVKTMKEESGSDRRDDLRDEDRRRDDDRYRADDRDRPRDSAPRDYVRPGESRVDEPR YDAPRYDSPRDGGDSRPSA" sig_peptide 1768101..1768199 /gene="tatA" /locus_tag="CMS_1676" /old_locus_tag="CMS1676" /note="Signal peptide predicted for CMS1676 by SignalP 2.0 HMM (Signal peptide probability 0.965) with cleavage site probability 0.956 between residues 33 and 34" misc_feature 1768122..1768304 /gene="tatA" /locus_tag="CMS_1676" /old_locus_tag="CMS1676" /inference="protein motif:HMMPfam:PF02416" /note="HMMPfam hit to PF02416, Bacterial sec-independent translocation protein mttA/Hcf106, score 1.7e-17" misc_feature 1768128..1768196 /gene="tatA" /locus_tag="CMS_1676" /old_locus_tag="CMS1676" /note="1 probable transmembrane helix predicted for CMS1676 by TMHMM2.0 at aa 10-32" gene 1768521..1769273 /gene="tatC" /locus_tag="CMS_1677" /old_locus_tag="CMS1677" /db_xref="GeneID:6159007" CDS 1768521..1769273 /gene="tatC" /locus_tag="CMS_1677" /old_locus_tag="CMS1677" /codon_start=1 /transl_table=11 /product="Sec-independent protein translocase protein TatC" /protein_id="YP_001710398.1" /db_xref="GI:170782066" /db_xref="GeneID:6159007" /translation="MSLVQHLLELKKRLFIAGVAIILAMVAGWFLSSFVLEALRQPIE TINQEQGRNASLNFPTITSAFDLRLQIALYVGLIISSPVWLYQVFAFLVPGLTKTERR YTFGFFFSAVPLFLAGCAAGWFVLPHIVALLTQFAGAGDSSFITAREYFDFVLKLVFA VGIAFVLPVFLVLFNFMGILTGATIIKSWRIAILLIILFCAIATPAADVMSMFLLAVP MTLLYLVAAGISLLNDRRRARKAAAMTDDLLS" sig_peptide 1768521..1768640 /gene="tatC" /locus_tag="CMS_1677" /old_locus_tag="CMS1677" /note="Signal peptide predicted for CMS1677 by SignalP 2.0 HMM (Signal peptide probability 0.731) with cleavage site probability 0.655 between residues 57 and 58" misc_feature 1768554..1769174 /gene="tatC" /locus_tag="CMS_1677" /old_locus_tag="CMS1677" /inference="protein motif:HMMPfam:PF00902" /note="HMMPfam hit to PF00902, Sec-independent periplasmic protein translocase, score 1.5e-49" misc_feature order(1768560..1768628,1768731..1768799,1768833..1768901, 1768989..1769057,1769076..1769135,1769148..1769216) /gene="tatC" /locus_tag="CMS_1677" /old_locus_tag="CMS1677" /note="6 probable transmembrane helices predicted for CMS1677 by TMHMM2.0 at aa 31-53, 88-110, 122-144, 174-196,203-222 and 227-249" gene 1769368..1771839 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /db_xref="GeneID:6159009" CDS 1769368..1771839 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /EC_number="3.6.1.-" /codon_start=1 /transl_table=11 /product="putative helicase" /protein_id="YP_001710399.1" /db_xref="GI:170782067" /db_xref="GeneID:6159009" /translation="MTDQLSPAERYAASRSRRSLPLLESFASGLRFDLDPFQRAAAES LENGRSVLVAAPTGAGKTIVAEFAVYLAMQRPSAKIFYTAPMKALSNQKYAELVAEYG PDEVGLLTGDTNVNSRARIVVMTTEVLRNMLYADSDLLRDLAFVIMDEVHYLADRFRG AVWEEVIIHLPQSVRMISLSATVSNAEEFGDWLQAVRGETDVIVSEERPVPLEQHVIV RHRMLDLFDSSGLAATHRVNPELVRMTHGGGREAVRVRGGQGHSRGRAGAGGGSGRRA PGPWDRGRMDRPEVVALLEERNLLPAIFFIFSRAGCDAAVTQVLRAGVRLTHAHERDE IRAVVEERCRTLRDEDLAVLGYWEWLEGLERGVAAHHAGMLPAFKEVVEELFQRKLVK AVFATETLALGINMPARTVVLEQLEKFNGEARVPLTPGEYTQLTGRAGRRGIDVEGHA VIQWKDGLDPQAVASLASRRTYPLNSSFRPTYNMAVNLIDQFGRERTREVLESSFAQF QADRAVVDLARKVRTQEESLAGYEKAMVCHLGDFREYSGLRRELSDLERATAARADMQ QPGQHGERDKRQRQLTDLRRRMKAHPCHACKDRESHARWAERWWRLKRQTDALGQQIR TRTNAVAKVFDRVTELLLSLGYLKRAADGQVAPTPNGRMLKRIYGDRDLLIAECLRTQ VWVDLDPAALAAMAASLVYQPLRDEGDRNDRNLPRGAFRAALERTEEIWSRLDDVERE RRLPTTDPLSTGLCAPMHRWARGGSLDAVLDEADLAAGDFVRWTKQTIDLLDQLSIVA DGPVSRNARTALDSIRRGIVAYSSV" misc_feature 1769461..1769922 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /inference="protein motif:HMMPfam:PF04851" /note="HMMPfam hit to PF04851, Type III restriction enzyme, res subunit, score 1.1e-06" misc_feature 1769467..1769934 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 1.3e-30" misc_feature 1769530..1769553 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1770442..1770696 /locus_tag="CMS_1678" /old_locus_tag="CMS1678" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 2.4e-10" gene 1771836..1773431 /gene="lnt" /locus_tag="CMS_1679" /old_locus_tag="CMS1679" /db_xref="GeneID:6157451" CDS 1771836..1773431 /gene="lnt" /locus_tag="CMS_1679" /old_locus_tag="CMS1679" /EC_number="2.3.1.-" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="YP_001710400.1" /db_xref="GI:170782068" /db_xref="GeneID:6157451" /translation="MTALARAPRRERAVPASAGIASPEPVRPPLPLWGALLAAAASGP VMDAAFPDRGLWPLVFPGIALVLLALRGRRAGPAFLIGLVAGLAFYLTHIEWASLYLG PVPWIALSALESLFVATGAVAIATATRWIPRAFPTVAGRVVLLPVAVAGLWTAREAIS AVWPYGGFAWGRVSLSQSESPFAHLVTWLGLSGLSFVLVLLVALLLELAAEERVRRSS RALVAGIAVALVLVVPAFPVATTGTTRVAAVQGNAKAGYFDGARYGDILRAHLAATAE IPSDADVDMVVWPENAADADPLRDPGSAAALDRVVARLGAPLVVGTVTERDGRYYNES LVWTGGGATDHYDKKHPVPFGEYVPDRAFWEPFAPDLIGLIQREYTPGTTDQVMDVAG VTAGIAICFDIVDDQLTTDMVHEGAGIILAQSNNADFGRTDESVQQLAIARMRALETG RSVVNISTVGTSAIVGPDGRDIDRLPWFTAGSMVVDVPTADVVTPAILVGRDIEWLVS GLGLGALAVSGLGLGRRGRRAAR" sig_peptide 1771836..1771955 /gene="lnt" /locus_tag="CMS_1679" /old_locus_tag="CMS1679" /note="Signal peptide predicted for CMS1679 by SignalP 2.0 HMM (Signal peptide probability 0.787) with cleavage site probability 0.565 between residues 40 and 41" misc_feature order(1771992..1772045,1772058..1772117,1772145..1772213, 1772247..1772300,1772385..1772453,1772490..1772558, 1773348..1773401) /gene="lnt" /locus_tag="CMS_1679" /old_locus_tag="CMS1679" /note="7 probable transmembrane helices predicted for CMS1679 by TMHMM2.0 at aa 53-70, 75-94, 104-126, 138-155,184-206, 219-241 and 505-522" misc_feature 1772568..1773110 /gene="lnt" /locus_tag="CMS_1679" /old_locus_tag="CMS1679" /inference="protein motif:HMMPfam:PF00795" /note="HMMPfam hit to PF00795, Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase, score 9.9e-07" gene complement(1773523..1773873) /locus_tag="CMS_1680" /old_locus_tag="CMS1680" /db_xref="GeneID:6158797" CDS complement(1773523..1773873) /locus_tag="CMS_1680" /old_locus_tag="CMS1680" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710401.1" /db_xref="GI:170782069" /db_xref="GeneID:6158797" /translation="MRGMRLGSTSLQSEEGVSFSPRQRKTYRTTDGTTFEVVFSADAE VPEVWESPKSGLEGRLLDADGAPVAHDEVEAKVPRSHWDMLLERRTRAELEELLEERL ATLRARRGQHRIGA" gene complement(1773949..1774737) /locus_tag="CMS_1681" /old_locus_tag="CMS1681" /db_xref="GeneID:6157452" CDS complement(1773949..1774737) /locus_tag="CMS_1681" /old_locus_tag="CMS1681" /codon_start=1 /transl_table=11 /product="putative phosphodiesterase" /protein_id="YP_001710402.1" /db_xref="GI:170782070" /db_xref="GeneID:6157452" /translation="MTRSAWFDGDVPRVLAHRGWTGSGAVENTLDAFRAAWALGVTHL ETDVHVTADDVCVLWHDADLRRLTGRPGRVRDVTLADMRAIDLGSGARVATLAELLEA LPDARINIDVKGRHAPAAAARTIRDAHAVDRVLVTSFSGSRRRRALALLPGAATSADA GRLVLAVLAARLGIGPLTRLALRGVDAVQMPCRVIGIRTVSPTLVARLGRAVREVQVW TVDDPDEMVRLVSAGIHGIVTDRPDLALAALGRRDWDSPGNRVS" misc_feature complement(1774006..1774689) /locus_tag="CMS_1681" /old_locus_tag="CMS1681" /inference="protein motif:HMMPfam:PF03009" /note="HMMPfam hit to PF03009, Glycerophosphoryl diester phosphodiesterase, score 1.7e-28" gene complement(1774734..1775051) /locus_tag="CMS_1682" /old_locus_tag="CMS1682" /db_xref="GeneID:6157453" CDS complement(1774734..1775051) /locus_tag="CMS_1682" /old_locus_tag="CMS1682" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710403.1" /db_xref="GI:170782071" /db_xref="GeneID:6157453" /translation="MTVLLDDHAWIVWLALIVTAVVVEMRRLDLRALCGGAAALAALL SGLVGAPWWLQALVAVVVAAALLGAARPAVLRALPVEDPHGRDVPGSGAPSPAPDDDV RSA" misc_feature complement(order(1774890..1774958,1774977..1775024)) /locus_tag="CMS_1682" /old_locus_tag="CMS1682" /note="2 probable transmembrane helices predicted for CMS1682 by TMHMM2.0 at aa 10-25 and 32-54" gene 1775227..1776006 /locus_tag="CMS_1683" /old_locus_tag="CMS1683" /db_xref="GeneID:6157454" CDS 1775227..1776006 /locus_tag="CMS_1683" /old_locus_tag="CMS1683" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /protein_id="YP_001710404.1" /db_xref="GI:170782072" /db_xref="GeneID:6157454" /translation="MSTVDEIRPFAPDELRGRRALVTGSSRGIGADTVAYLAEAGADV VVNYRNKAARAEKLVAKLVEGGTKAIAVGADLTDPESVDRLMDTIRTELGGLDVLVLN ASGGMESGMAEDYAMTLNRDAQLNVLRSALPLMSEGGRVVFVTSHQAHFIRTTPTMPE YEGVARSKRAGEDALRELLPELDERGIGFVVVSGDMIEGTITATLLGRMNPEAIQQRK EASGGLYNVSQFAAEVARAVVDPIPADHTRLVGDTGSFQPE" misc_feature 1775284..1775988 /locus_tag="CMS_1683" /old_locus_tag="CMS1683" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 7e-18" gene 1776142..1778133 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /db_xref="GeneID:6157455" CDS 1776142..1778133 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="YP_001710405.1" /db_xref="GI:170782073" /db_xref="GeneID:6157455" /translation="MHADAYTGQLWEVATDGSAPPRRITRGFRDTAPRLSPDGTVIAF LRAAPQGPPQLHVVRAAGGEPVAVTDELLGVGAFDWSPDGTRIVFASRVAEPGRYGSV EGVSPAAEPARRITTTKYLANGLGWSTDRHTQLSLVDLPDLDAEPFVAAVPSGYPDAS DPAVRGDGADAAPSAAERAGVPPVVRLTDEPVDHDAPRFSSDGSEVLFVASRHEGRDD DLLSGAYAVAVPAVGDASAGLPEVRTVVSHEAGLGIAEVASVEGGRTYLLAQDLGETG VDFVARNTALYVLDEVDAAPRVLTDAETVDLGGSGITVEDRDAVLVLNGSRGTVQLLR VTADGAVEALVDDQVEVAGVGVGGGAVVIALTDPRTHGDLALVRTDRAPDAGSALVPL TDFSAPLRETGIRPLHELVVEGRDGYPVHGWVVLPEGEGPHPVLLVIHGGPYAAYGVH LFDEAQVYADAGYAVLLCNPRGAAGYGQAHGRVIKERMGTVDMHDVLDFLDGAIAVYH SIDGSRAGIMGGSYGGYLTAWTIAHEHRFQGAIVERGFLDPELFTGTSDIGTFFGEEY TGHDEETRRAQSPQAFVHQVRTPTFVVHSEDDLRCPLSQAERYHLALVRAGVETEMLV FPGEDHELSRSGRPRHRVQRFEAILEWWARHLPVGGGAR" misc_feature 1776205..1776312 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" misc_feature 1776337..1776444 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" misc_feature 1776694..1776807 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /inference="protein motif:HMMPfam:PF07676" /note="HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat" misc_feature 1777486..1778118 /locus_tag="CMS_1684" /old_locus_tag="CMS1684" /inference="protein motif:HMMPfam:PF00326" /note="HMMPfam hit to PF00326, Peptidase S9, prolyl oligopeptidase active site region, score 1.3e-55" gene 1778130..1778600 /locus_tag="CMS_1685" /old_locus_tag="CMS1685" /db_xref="GeneID:6157456" CDS 1778130..1778600 /locus_tag="CMS_1685" /old_locus_tag="CMS1685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710406.1" /db_xref="GI:170782074" /db_xref="GeneID:6157456" /translation="MSDGVVRHVRHTARILLVDERDRLLLFLTNYSTNVDLPPRWLTP GGGIDPGESPAQAVRRELFEETGLRVDSVGEPVWEHDYARQRIDGDLDTGHSTFYLVR ADAFAPVSDNWMPDEFDDIHAHRWFTLDELATTEDPIEPAEMVDVAREVLSRST" misc_feature 1778154..1778582 /locus_tag="CMS_1685" /old_locus_tag="CMS1685" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 2e-18" misc_feature 1778265..1778324 /locus_tag="CMS_1685" /old_locus_tag="CMS1685" /note="PS00893 mutT domain signature." misc_feature 1778652..1808679 /note="Similarity to part of the Cmm pathogenicity island" gene 1778672..1779307 /locus_tag="CMS_1686" /old_locus_tag="CMS1686" /db_xref="GeneID:6157457" CDS 1778672..1779307 /locus_tag="CMS_1686" /old_locus_tag="CMS1686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710407.1" /db_xref="GI:170782075" /db_xref="GeneID:6157457" /translation="MRIVLGGRAPPHEVLRSRCDWRTSCRRAAWTATPRAQEPRCAAL VGLPPRWSARRRPGGRWSRSRAARAPPPVHEAAPCPTTPTRAMRPVQVGAEVTQGRRR TGGRGAPHVTYAPPITPTRGQPRGVRGAAGTRRRTKRPCSRIRSASPCSTSRSCTSSD GSRAARRVDFSADLWITTVHPSACPHTVCPRARRVRHRHSPSPPGRLSPLC" gene 1779365..1780252 /gene="lip" /locus_tag="CMS_1687" /old_locus_tag="CMS1687" /db_xref="GeneID:6157458" CDS 1779365..1780252 /gene="lip" /locus_tag="CMS_1687" /old_locus_tag="CMS1687" /EC_number="3.1.1.3" /codon_start=1 /transl_table=11 /product="putative exported lipase" /protein_id="YP_001710408.1" /db_xref="GI:170782076" /db_xref="GeneID:6157458" /translation="MPNFITRRRFTAVAAVAMLATLGVQSTAQAATASYARNGDPTLA SISSMTGPEKAHKTRVLPTDVTGFGGGTIFYPTNTQGKTVGAVVLAPGFTGLKGSVGW YGPALASQGFIVFNMDTLDPADFPNSRATQIGAAIDYLKKAPVLKGRLDPSRIAVAGY SMGGGGALKLATTHPELKAVLAFAPYYASDDLSTNALPEAAGITTPTLIITGQKDDLA IPATFGKSYYDTLPKTTPRQYLELAGATHEAPQHKNTDILSASVAFLKTFVDNDERYA KFTFPSPQRPSLSASISTR" gene 1780435..1780929 /locus_tag="CMS_1688" /old_locus_tag="CMS1688" /db_xref="GeneID:6158794" CDS 1780435..1780929 /locus_tag="CMS_1688" /old_locus_tag="CMS1688" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710409.1" /db_xref="GI:170782077" /db_xref="GeneID:6158794" /translation="MCRIERRTPGPQDPRTPGPQCLAGRRHLNPHDRGVAATLVIVDW AEVGARVLGSSTSLPRRRARPGAPSLSSRRGAHAAVSTLVGLLLVCMSFVPLKLLESL MSASDGGRGDRRSCRSTVWQGRRAVGRRGLAGHGTVRDADERPPAPPVARRSMITARE ESPK" gene complement(1781079..1781348) /locus_tag="CMS_1689" /old_locus_tag="CMS1689" /db_xref="GeneID:6157459" CDS complement(1781079..1781348) /locus_tag="CMS_1689" /old_locus_tag="CMS1689" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710410.1" /db_xref="GI:170782078" /db_xref="GeneID:6157459" /translation="MPRFRRLGHGLRAPCAFARETRNQHLIKRSSTGDTLYWPVGRTP LSVCGATLFLATRTSSMDILLRFATLCLKGFLPHNNVWLSHIHDR" gene 1781456..1782493 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /db_xref="GeneID:6157460" CDS 1781456..1782493 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001710411.1" /db_xref="GI:170782079" /db_xref="GeneID:6157460" /translation="MSKVGVRRMGRAPGMVDVAQIAGVSHVTVSRVLNGHPSVRPETR ARVEAAIAQLGYRRNTVARALKSKRSSTIGVVMAGSGLYELPRVLLGIETTARAAGYE INLASWQGSAASDLAEMVRRLTDQSVEGVAVIAARQVAVDALSDVVTDVPMSVVMSGS VPNPRVGFVELDQELGARLAVRHLRDLGHERIVHLAGNAATFDATARVQGWRDELSSS PDLPQELLQGDFTAASGYSLTSDLARSPDGLPTAIFAGNDLMALGALAALAELGLSVP DDVSLVGFDDIAGADHFIPALTTVRQDFETLGSTAMETLLSTMSGQEPVRRQIPPTLV VRKSTAAPRRS" misc_feature 1781492..1781569 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 1.3e-06" misc_feature 1781492..1781557 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /note="Predicted helix-turn-helix motif with score 1621.000, SD 4.71 at aa 13-34, sequence PGMVDVAQIAGVSHVTVSRVLN" misc_feature 1781498..1781554 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /note="PS00356 Bacterial regulatory proteins, lacI family signature." misc_feature 1781663..1782481 /locus_tag="CMS_1690" /old_locus_tag="CMS1690" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 3.3e-09" gene complement(1782515..1784161) /locus_tag="CMS_1691" /old_locus_tag="CMS1691" /db_xref="GeneID:6157461" CDS complement(1782515..1784161) /locus_tag="CMS_1691" /old_locus_tag="CMS1691" /codon_start=1 /transl_table=11 /product="putative xylosidase/arabinosidase" /protein_id="YP_001710412.1" /db_xref="GI:170782080" /db_xref="GeneID:6157461" /translation="MKTPIIIAWSPTLSTFRNPVLTGLNPDPSVCAVGEEFFLVTSSF AYWPAIPVHRSRDLVNWEPIGHVLDRPEQIDLSGLDMSDGIWAPTIRHHDGVFYVVST VARERRGSMNFVTTARNAAGPWSQPVILDAEGIDPSLFFDDDGRCWFSACRDAEDPDR RGPAELYLQELDLESLQLIGPLHVLWNGAIAGAWAEAPHIYKHDGVYHLIAAEGGTER NHAVTAARSETITGPYRTDPRSPLLTHRHLGRHAPIQDVGHADVVETPTGETWALVLG TRPVDGAHTLGREVFLVPAEWTDAGLLLAPGHGRVAEVERRPTDALGDERVPGISEPE PERECFSDADLPQGWRTLRGPLQHHAHDTGDGLSLTVSPAELSGSGTPSFVARRQEHQ CFEARTSVSFRQRASSEQAGLVVFHDERHFATLAVTLDADGKRIVRFERAGTSGTSGE IALEHDGEATLRVVGDLDAYSFSYWNGRESEWLTIGMVPRAWFSTEHAGGFVGVHVGL HATGTRPETVDAAHFPWFEYVPLTDRATALTLRPVIAAGQ" misc_feature complement(1783253..1784065) /locus_tag="CMS_1691" /old_locus_tag="CMS1691" /inference="protein motif:HMMPfam:PF04616" /note="HMMPfam hit to PF04616, Glycoside hydrolase, family 43, score 4.8e-50" gene 1784339..1785634 /locus_tag="CMS_1692" /old_locus_tag="CMS1692" /db_xref="GeneID:6157462" CDS 1784339..1785634 /locus_tag="CMS_1692" /old_locus_tag="CMS1692" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport" /protein_id="YP_001710413.1" /db_xref="GI:170782081" /db_xref="GeneID:6157462" /translation="MALATAGALALSLSACSAGGGDGDTSADGPVTLDFWTYSVKGND PKAQAIVDRYNELNPDVTVKLSEVGGTADTSSKLLAADRADETPDIVQVEYRALPSLV VAGVVKDITDDVADAKDDVADNIWDLTTFDDRVYGVPQDIGPAMFTYRKDLFEQYGVE VPTTWAEYADAAEKIHTADPTVYISSFDPGEFQFFAAQAAQAGAEWWTNDGDTWKVGI DSEESLATADFWQDLVERDLVKVEALVTPEWNAEINDGKVLSWAAASWVPSVINAVAP DTAGKWESAPLPQWTEGDASVPFVGGSAYLVPEKSSDAEAAAKFATWLSTSDEGSKLL LSLDLYPGGNGGREATAKSAPPALMPDQADFYQIADQVIEDTTIPVTWGPNVNVAQTV FNDAMNAAALKGTSFRDVYTATQDAVVADLEKTGYSVEK" sig_peptide 1784339..1784419 /locus_tag="CMS_1692" /old_locus_tag="CMS1692" /note="Signal peptide predicted for CMS1692 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.802 between residues 27 and 28" misc_feature 1784348..1785331 /locus_tag="CMS_1692" /old_locus_tag="CMS1692" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 8.9e-31" misc_feature 1784354..1784386 /locus_tag="CMS_1692" /old_locus_tag="CMS1692" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1785719..1786681 /locus_tag="CMS_1693" /old_locus_tag="CMS1693" /db_xref="GeneID:6157463" misc_feature order(1785833..1785901,1786010..1786078,1786115..1786183, 1786241..1786309,1786412..1786480,1786577..1786645) /locus_tag="CMS_1693" /old_locus_tag="CMS1693" /note="6 probable transmembrane helices predicted for CMS1693 by TMHMM2.0 at aa 7-29, 66-88, 101-123, 143-165,200-222 and 255-277" misc_feature 1785989..1786672 /locus_tag="CMS_1693" /old_locus_tag="CMS1693" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.0012" misc_feature 1786331..1786417 /locus_tag="CMS_1693" /old_locus_tag="CMS1693" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 1786681..1787707 /locus_tag="CMS_1693A" /old_locus_tag="CMS1693A" /pseudo /db_xref="GeneID:6157464" misc_feature order(1786774..1786842,1786960..1787028,1787065..1787133, 1787161..1787229,1787290..1787358) /locus_tag="CMS_1693A" /old_locus_tag="CMS1693A" /note="5 probable transmembrane helices predicted for CMS1694 by TMHMM2.0 at aa 32-54, 94-116, 129-151, 161-183 and 204-226" /pseudo misc_feature 1786945..1787502 /locus_tag="CMS_1693A" /old_locus_tag="CMS1693A" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 5e-05" /pseudo gene 1787707..1789935 /locus_tag="CMS_1694" /old_locus_tag="CMS1694" /pseudo /db_xref="GeneID:6157465" misc_feature 1788421..1788894 /locus_tag="CMS_1694" /old_locus_tag="CMS1694" /inference="protein motif:HMMPfam:PF01055" /note="HMMPfam hit to PF01055, Glycoside hydrolase, family 31, score 1e-05" /pseudo misc_feature 1789009..1789710 /locus_tag="CMS_1694" /old_locus_tag="CMS1694" /inference="protein motif:HMMPfam:PF01055" /note="HMMPfam hit to PF01055, Glycoside hydrolase, family 31, score 1.3e-16" /pseudo misc_feature 1789971..1792635 /note="submitted with no further information" gene 1790148..1790474 /locus_tag="CMS_1696" /old_locus_tag="CMS1696" /db_xref="GeneID:6157466" CDS 1790148..1790474 /locus_tag="CMS_1696" /old_locus_tag="CMS1696" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710415.1" /db_xref="GI:170782082" /db_xref="GeneID:6157466" /translation="MPRRAFAGRTRRRSSRVDIVLALAFLSLSSTISVIVGRVSTRPR MGVSDIALKAEGAAVEVEEGHPVRLAVRDRSRPGQRPARAATRPTSPMSVVVVASVPM DRRRDV" sig_peptide 1790148..1790261 /locus_tag="CMS_1696" /old_locus_tag="CMS1696" /note="Signal peptide predicted for CMS1696 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.482 between residues 38 and 39" misc_feature 1790202..1790270 /locus_tag="CMS_1696" /old_locus_tag="CMS1696" /note="1 probable transmembrane helix predicted for CMS1696 by TMHMM2.0 at aa 19-41" gene 1792682..1793864 /locus_tag="CMS_1700" /old_locus_tag="CMS1700" /pseudo /db_xref="GeneID:6157467" misc_feature 1792682..1793848 /locus_tag="CMS_1700" /old_locus_tag="CMS1700" /inference="protein motif:HMMPfam:PF00232" /note="HMMPfam hit to PF00232, Glycoside hydrolase, family 1, score 6.2e-32" /pseudo gene complement(1793927..1796191) /locus_tag="CMS_1701" /old_locus_tag="CMS1701" /db_xref="GeneID:6157468" CDS complement(1793927..1796191) /locus_tag="CMS_1701" /old_locus_tag="CMS1701" /codon_start=1 /transl_table=11 /product="putative glycosyl hydrolase" /protein_id="YP_001710416.1" /db_xref="GI:170782083" /db_xref="GeneID:6157468" /translation="MEETRPHDPREDRIAGLSRLPLERKAALVSGRSFWETEAIEEIG LPPVVLADGTYGLRHQSGQHDHLAMFESDPATCFPPGVAVGSSWDPELAARLGHAIGR EARAQGVDIVLGPGINIKRSPLCGRNFEYYSEDPLLAGVLGASFTRGLQAEGPGVSVK HFAANNQETNRQTISADVDERTLREIYLPAFERVVTEASPATVMSAYNKINGIPSAEN RWLLTDLLREEWGFTGAVVSDWNAITDRVAALAAGLDLDMPGGSGAFDDDIVAAVRSG ALREEDLDASVARIARLARYRSTAPVSTAPVDVDYARHHVIARELAAECAVLLRNEGD VLPLGPGLRVAVIGQFAEEPRYQGGGSAHVHPTRIDTPLEEIRDLAMQDGVSVAYARG FRTDVAGDDALASSAVEEARRSDVAIVFAGLDERAESEGIDRADMDLPRDQVELILAV AEAAPRTVVVLANGGVVSLEGWHDAVDGILEGFLLGQGGGHALAEILFGRVNPSGHLA ETIPFRLDDHPSSLNFPGEQGSVRYGEGVMVGYRYFPTFGRAVRYPFGHGLSYTTFST GEPRIEVVGADSVLVRVDVANTGARAGKHVVQVYVGTDAGPVRRPSRELRAFDKVHLQ PGETRTVELELPRRAFAYWDVLRGGWIVSPGEYRIQVAADAETVLHEVAVELAGDVAE TELTMDTAMGVWFEHPRLGARVIEVLGLTDDAVSPEHMAMMASMTMRQFGAISGMELP QDALDEIMAASRPT" misc_feature complement(1794569..1795216) /locus_tag="CMS_1701" /old_locus_tag="CMS1701" /inference="protein motif:HMMPfam:PF01915" /note="HMMPfam hit to PF01915, Glycoside hydrolase, family 3, C-terminal, score 1.4e-80" misc_feature complement(1795415..1796083) /locus_tag="CMS_1701" /old_locus_tag="CMS1701" /inference="protein motif:HMMPfam:PF00933" /note="HMMPfam hit to PF00933, Glycoside hydrolase, family 3, N-terminal, score 4.8e-106" gene 1796470..1797810 /locus_tag="CMS_1702" /old_locus_tag="CMS1702" /db_xref="GeneID:6157469" CDS 1796470..1797810 /locus_tag="CMS_1702" /old_locus_tag="CMS1702" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710417.1" /db_xref="GI:170782084" /db_xref="GeneID:6157469" /translation="MTPAPSSPDQNPAQILPNAAEAVADYVLDELEGSGPPPAAEPAR VGLGFILIYMFSYFGLNLVMLMPALFSLAYKVQLIDPDNRNVSLGLVLGLGGIIGLVG GPVAGVLSDATRLRWGRRRPWLVGGVVISALGGLVLAAAPNVPVMILGWAVAQLAVAV ISAGFNPILAEFVPTEQRGRLGALGGLSAAFAGVGASLLGSFLTGNIFFLFLLPPAVF ALGVLILVLLLKERAAPADTLVPSIADVFKGFYFDPRKHRDFAFVFLGKFLLQFGFTF FSTYQLYFLLDRLGYTPEKAGRNLAVAGGVSLLALMVFAVLGGFLSDKLRRRKPFIYG AALLIAGGLVWVSLAPDLNSFIIGGALLSAGTGAFTSVDLAMATDLLPEKDKAGKYMA IYYMSSGIPGIIAPIVAPVVLAIGGGDNYSLLFIFGGMLGLGTIITTSRIRGVR" misc_feature 1796608..1797801 /locus_tag="CMS_1702" /old_locus_tag="CMS1702" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.2e-05" misc_feature 1796614..1797711 /locus_tag="CMS_1702" /old_locus_tag="CMS1702" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature order(1796620..1796688,1796731..1796799,1796836..1796895, 1796908..1796976,1797010..1797078,1797088..1797156, 1797256..1797324,1797367..1797435,1797454..1797507, 1797535..1797603,1797640..1797708,1797736..1797804) /locus_tag="CMS_1702" /old_locus_tag="CMS1702" /note="12 probable transmembrane helices predicted for CMS1702 by TMHMM2.0 at aa 51-73, 88-110, 123-142, 147-169,181-203, 207-229, 263-285, 300-322, 329-346, 356-378,391-413 and 423-445" gene 1797810..1800548 /locus_tag="CMS_1703" /old_locus_tag="CMS1703" /db_xref="GeneID:6157470" CDS 1797810..1800548 /locus_tag="CMS_1703" /old_locus_tag="CMS1703" /codon_start=1 /transl_table=11 /product="putative glycosyl hydrolase" /protein_id="YP_001710418.1" /db_xref="GI:170782085" /db_xref="GeneID:6157470" /translation="MRQGVASRGAPPPSQPPLPVRIHPDSDSDSDSDSDSDSEDIPMS TDPDHRDTRLDTVDRVRDLLARMTLEEKAAQITCPFGTAVDVHTPPEAGWGTATAALL SLGALPRDAARKGDALQRAHVEGTRLGIPVLLAEEALIGLKVRGATTFPDAIAQAATW DAPLIRTVASRIGLQMSRMGIRQALSPLADVARDPRWGRVEETYGEEPYLVGTMASAF VDGLQTADPERPLIATLKHFIGYGASDGGRNTDVAHMGAHELREVYALPFEMAIHLGG ARGVMPAYNSIDGVPVTGSRALLRGLLRDELGFDGLITSDLEAVSQLSTKHATAPDAA HAFAQALRAGVNADLDNKVSGGVIVAAVRDGVLTVAELDDAVGGILRAKLEIGLLDQP YIDLDAVPESLDSDEDRALARLVAERSAILLRNEAVDGTPVLPLPSTPQWIAVIGPNA HRPMGQLGNYSYQVLDSMTQRFAEAANPQARISADLDTGADGAELLVESVPVVTFLEG IRARAHEGSSVVYARGCPVSSEDRSGIAEAVETARTADVAVLVVGDQAGIGAYGTVGE GIDSATCELPGIQRELVEAVVATGTPTVVVLSHGRPYVLGWMAETVPAIVSSFFGGEE AGPAVASVLFGDVNPAGRLPIAMLESVGAAPLPYWRTLMPDSYADGSTRAVFPFGHGL SYTAFEYRDLAVESDEVPTDGSVRLSFTVVNVGERSGDEVVQVYGRDMVGRTTRRGRV LVGYERVALEAGAAVRVSIDVPASVFALWDATDGWVVEPGLIRFYVGPSSAVSALQAK VVLTGGEARPGRDRALVSTIRSNPVDPDAATGPARAIDLASVVPVTAESTVREWLDHP VGGPELRAALGGVEEDMLADAFGLSLERMAFYSQGAIPGSLVDDLVERVRVAHVGS" misc_feature complement(1798122..1798478) /note="submitted with no further information" misc_feature 1798173..1798859 /locus_tag="CMS_1703" /old_locus_tag="CMS1703" /inference="protein motif:HMMPfam:PF00933" /note="HMMPfam hit to PF00933, Glycoside hydrolase, family 3, N-terminal, score 7.1e-69" misc_feature 1799067..1799867 /locus_tag="CMS_1703" /old_locus_tag="CMS1703" /inference="protein motif:HMMPfam:PF01915" /note="HMMPfam hit to PF01915, Glycoside hydrolase, family 3, C-terminal, score 5.1e-61" gene 1800641..1801621 /locus_tag="CMS_1704" /old_locus_tag="CMS1704" /db_xref="GeneID:6157471" CDS 1800641..1801621 /locus_tag="CMS_1704" /old_locus_tag="CMS1704" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001710419.1" /db_xref="GI:170782086" /db_xref="GeneID:6157471" /translation="MATSADVAQHAGLSRSTVSQILNGREHLFLEETVTRVRAAAAEL GYRPSMAGRTLARGTSDIVITLIPDITFNARLRELIDAVTRGLAEAGLTNLLRFVGSD DSLDSLEDAILRLKPFGVVSLAYLSDEQQERVLARGVRLVAQSAALQAAIDESFGRLQ AEHLAASGYTTLAAVLPVSAREESFAAPREAGVRAWAREAGIDVIPTRHVTMERGGAF DAIRDLPAGPVGFAAYNDEVAAALLGAAISQGIDVPRRLGIIGIDNSPIARSSTPSIT TVDYDIEFSGVEIVEDILGRGPGRDVLDPAREVQQRLRVIAGETTLPPRV" misc_feature 1800644..1800709 /locus_tag="CMS_1704" /old_locus_tag="CMS1704" /note="Predicted helix-turn-helix motif with score 2025.000, SD 6.08 at aa 2-23, sequence ATSADVAQHAGLSRSTVSQILN" gene 1801743..1804370 /locus_tag="CMS_1705" /old_locus_tag="CMS1705" /db_xref="GeneID:6157472" CDS 1801743..1804370 /locus_tag="CMS_1705" /old_locus_tag="CMS1705" /codon_start=1 /transl_table=11 /product="putative glycosyl hydrolase" /protein_id="YP_001710420.1" /db_xref="GI:170782087" /db_xref="GeneID:6157472" /translation="MALTRVNALRIMILARGSHRRSRPEPLPPPPLSRRDPHPRETPM TRMPFNTGWSHRRKTSIFADVQGQAAAGSAVRLPHDALIGLERRADAPSGAAGAFFPD GAFEYRKAFDVPSEWSEKHVSIEFEGVYRDAMVYVNGAFAAQRPNGYASFVVDLDAHL AYGEENTIRVDARVHDDSRWYTGAGIYREVHLRVSGRVHVVEQGGLRITTPDVDDRRA VVQVETQLRNTGLRTVTVEVASEAVTPDGRVVGTGTSPITLLPRISGVVRQRLYVAEP ERWSVDRPALHTIRTSVRRDGEELDARETTFGIRTLQLDPDHGLRINGETVKLRGACI HHDNGILGAATFADAEERRVVLLKAAGFNAIRSSHNPMSAAMLDACDRHGMLVMDETF DMWSESKSPFDYSLAFPEWWERDVEAMVADDINHPSVIMYSIGNEIPETGNPIGSGWG RLLAERIRELDDTRFITNGINGFVSALTEVTAMMEEAMAAAASVATAPSDGAEGDGGV NALMGDGDAFMDQVAVSPLVTAAIAESFALLDVVGLNYGDARYEMERRDHPGRIVVGT ETFPSRIDANWRLVTDNPHVIGDFTWSGWDYLGEVGVGRVKYEGESTGFDGEYPWLTS WSADLDMTGHRRPMSYYRETVFGLRSTPFIAVRRPENHGRAFTLGQWSWTDAIESWSW DAEEGTPMILEVYSDADEIELLLDGEVHARVQVGGRRRFVADFELPYRRGTLTAVAFT GGVETGRADLRSASDDVVLAVRAERETVGTGDGALSFVEIELRDREGALANHRDRPVT VQVDGPGSLVALGSGRPLTTERFDGDTHGTYDGRVLAVVRPDGEGDLHVTVTAPELAP VTVRVRAEASMSTDTKENP" misc_feature 1801869..1802330 /locus_tag="CMS_1705" /old_locus_tag="CMS1705" /inference="protein motif:HMMPfam:PF02837" /note="HMMPfam hit to PF02837, Glycoside hydrolase, family 2, sugar binding, score 1.1e-21" misc_feature 1802358..1802672 /locus_tag="CMS_1705" /old_locus_tag="CMS1705" /inference="protein motif:HMMPfam:PF00703" /note="HMMPfam hit to PF00703, Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich domain, score 0.0014" misc_feature 1802676..1803461 /locus_tag="CMS_1705" /old_locus_tag="CMS1705" /inference="protein motif:HMMPfam:PF02836" /note="HMMPfam hit to PF02836, Glycoside hydrolase, family 2, TIM barrel domain, score 6.5e-09" gene 1804367..1805020 /locus_tag="CMS_1706" /old_locus_tag="CMS1706" /pseudo /db_xref="GeneID:6157473" misc_feature 1804394..1805020 /locus_tag="CMS_1706" /old_locus_tag="CMS1706" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 3.7e-47" /pseudo misc_feature 1804796..1804882 /locus_tag="CMS_1706" /old_locus_tag="CMS1706" /note="PS00061 Short-chain dehydrogenases/reductases family signature." /pseudo gene complement(1805274..1805591) /locus_tag="CMS_1707" /old_locus_tag="CMS1707" /db_xref="GeneID:6157474" CDS complement(1805274..1805591) /locus_tag="CMS_1707" /old_locus_tag="CMS1707" /note="tandem duplication with upstream CDS" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710421.1" /db_xref="GI:170782088" /db_xref="GeneID:6157474" /translation="MAYLLLAGAILFEVAGTVSLRLAVDRRRWYAGVAVGYLAAFGLL TLTLDAGVPLGVAYGIWTAAGVALTAVIGVIAFKERFTWLMGIGVALVVGGVLLIELG TAH" misc_feature complement(order(1805280..1805348,1805361..1805429, 1805439..1805507,1805520..1805579)) /locus_tag="CMS_1707" /old_locus_tag="CMS1707" /note="4 probable transmembrane helices predicted for CMS1707 by TMHMM2.0 at aa 5-24, 29-51, 55-77 and 82-104" misc_feature complement(1805316..1805591) /locus_tag="CMS_1707" /old_locus_tag="CMS1707" /inference="protein motif:HMMPfam:PF00893" /note="HMMPfam hit to PF00893, Small multidrug resistance protein, score 6.3e-22" gene complement(1805591..1805932) /locus_tag="CMS_1708" /old_locus_tag="CMS1708" /db_xref="GeneID:6157475" CDS complement(1805591..1805932) /locus_tag="CMS_1708" /old_locus_tag="CMS1708" /note="tandem duplication with downstream CDS" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710422.1" /db_xref="GI:170782089" /db_xref="GeneID:6157475" /translation="MKGWSLLAVAVLAEVAGSLSLKGALDQPALYVLVAVGYVSAFVL LGAVLRTGMALGVAYGVWGAGGVASTAVGSSVVFREPLTPLMVAGIAVIMSGVLCIEL GAHAARRAEDR" misc_feature complement(order(1805621..1805689,1805699..1805767, 1805786..1805854)) /locus_tag="CMS_1708" /old_locus_tag="CMS1708" /note="3 probable transmembrane helices predicted for CMS1708 by TMHMM2.0 at aa 27-49, 56-78 and 82-104" misc_feature complement(1805654..1805929) /locus_tag="CMS_1708" /old_locus_tag="CMS1708" /inference="protein motif:HMMPfam:PF00893" /note="HMMPfam hit to PF00893, Small multidrug resistance protein, score 1.5e-08" gene complement(1805941..1806468) /locus_tag="CMS_1709" /old_locus_tag="CMS1709" /db_xref="GeneID:6157476" CDS complement(1805941..1806468) /locus_tag="CMS_1709" /old_locus_tag="CMS1709" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710423.1" /db_xref="GI:170782090" /db_xref="GeneID:6157476" /translation="MSSPGEILEHATTVLRRGDSLTIDSVAREAGLTKPGVIHHFATK EVLVVSVVDHILDRWEADLRARVGESDGATARLRAYVDHALDGDFDLSDLAFLVDARI CERLSRLWTARLGPWFGEDLAGSPTRRGALRAARLLADGAWFNASLGIPTADDDEREV VRRLAHDLIGRGAPA" misc_feature complement(1806316..1806450) /locus_tag="CMS_1709" /old_locus_tag="CMS1709" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 3.4e-07" misc_feature complement(1806343..1806408) /locus_tag="CMS_1709" /old_locus_tag="CMS1709" /note="Predicted helix-turn-helix motif with score 1263.000, SD 3.49 at aa 21-42, sequence LTIDSVAREAGLTKPGVIHHFA" misc_feature 1806529..1807249 /note="submitted with no further information" gene 1807294..1808952 /locus_tag="CMS_1711" /old_locus_tag="CMS1711" /db_xref="GeneID:6157477" CDS 1807294..1808952 /locus_tag="CMS_1711" /old_locus_tag="CMS1711" /codon_start=1 /transl_table=11 /product="putative pyridine nucleotide-disulphide oxidoreductase (putative NADH oxidase)" /protein_id="YP_001710424.1" /db_xref="GI:170782091" /db_xref="GeneID:6157477" /translation="MRSVIIGGVAGGMSAATRLRRLDEGREIVVFERGAYVSFANCGL PYHVGGVIPERASLLLQTPESLAARFRLDVRVRHEVLAIDATAKTVTVRDLEAAADQV LEYDDLVIAAGAGTASSTPDGGVPSSTLRSVEDVDGIMALLDGRTDAHAVVVGAGFIG LEAVENLLARGVRVTLVQRGDQVLSPLDPEMAAPVHETLHAAEVDVRTGTTVTGGSAG HVHLSDGTRVRADLVIQAAGVHPETGLARGAGLSIGPSGGIAVDGRQRTSDPSIWAVG DGVEKIDHLDGAPTLVTMAGLANRHGRAAADDIVGAAVTDAAPALGTAILGILGITVG LVGWNEKRLVAEGRRHRIIHTHPASHAGYYPGAQQMAIKLLVDPDDDRILGAQIVGRD GVDKRLDVIAVAMTGGLTASALSRLELAYAPQYGSAKDPVNLLGYVAENAATGTTRSL QWHELEAALDAGATLVDVRTAGEHASAAIPGAVSLPLDELRARHDELPAGPLVVHCQV GQRGHTAARLLTQLGHDVRNLDGGWLTWRAGTASTTRTTAATAA" misc_feature 1807297..1808157 /locus_tag="CMS_1711" /old_locus_tag="CMS1711" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 6.7e-57" misc_feature 1808260..1808592 /locus_tag="CMS_1711" /old_locus_tag="CMS1711" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 7.2e-14" misc_feature 1808644..1808910 /locus_tag="CMS_1711" /old_locus_tag="CMS1711" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 2.4e-07" gene 1808968..1809267 /locus_tag="CMS_1712" /old_locus_tag="CMS1712" /db_xref="GeneID:6157478" CDS 1808968..1809267 /locus_tag="CMS_1712" /old_locus_tag="CMS1712" /note="Appear to be a duplication of the C-terminal portion of the upstream CDS" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710425.1" /db_xref="GI:170782092" /db_xref="GeneID:6157478" /translation="MKSITVHDLAAATGATIIDVREPDEYAGGHARSAVNVPLSELGE RLDEIPTDQPVHVICQSGGRSARATDALAARGIDAIDVTGGTSAWIDADLPTDRA" misc_feature 1808980..1809243 /locus_tag="CMS_1712" /old_locus_tag="CMS1712" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 1.6e-11" gene 1809264..1809563 /locus_tag="CMS_1713" /old_locus_tag="CMS1713" /db_xref="GeneID:6157479" CDS 1809264..1809563 /locus_tag="CMS_1713" /old_locus_tag="CMS1713" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710426.1" /db_xref="GI:170782093" /db_xref="GeneID:6157479" /translation="MNDGTGQLHDADAVRKVANRLKRAQGQLTAVITAVENAGDCRDV VTQLAAVSSALDRAGFAIVSTAMQQCLVADDVDDAEPSPRKLTIEEIEKLFLTLA" misc_feature 1809363..1809560 /locus_tag="CMS_1713" /old_locus_tag="CMS1713" /inference="protein motif:HMMPfam:PF02583" /note="HMMPfam hit to PF02583, Protein of unknown function DUF156, score 3.2e-12" gene 1809720..1810061 /locus_tag="CMS_1715" /old_locus_tag="CMS1715" /pseudo /db_xref="GeneID:6157480" gene 1810379..1810675 /locus_tag="CMS_1717" /old_locus_tag="CMS1717" /pseudo /db_xref="GeneID:6157481" gene complement(1810902..1811771) /locus_tag="CMS_1718" /old_locus_tag="CMS1718" /db_xref="GeneID:6157482" CDS complement(1810902..1811771) /locus_tag="CMS_1718" /old_locus_tag="CMS1718" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710427.1" /db_xref="GI:170782094" /db_xref="GeneID:6157482" /translation="MTRPTAVIAVIGVTGAVGRAVSRSLADARLPPRLLVRTPARAPD LAGTTVHEAAYGDHAASVAALTGVSTVLMVSAAEDEHRLAQHVAFVDAAAEAGVEHVV YTSFAGAEADATFTLARDHHAAEERIRTSGMTWTFLRDAFYIDFVSQLVGDDGAIRGP AGDGRVAAVTRAGIAELVVAILRDPAPHAGVTYDLSGPEALTMAEIAATVRAATVGAA TGRTVRCEDETREEARASRAVGKAPEWQLDAWTSTYTARAAGEMGHVNDDVARVLGRR PTSLAESLAATTR" gene complement(1812122..1813084) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /db_xref="GeneID:6157483" CDS complement(1812122..1813084) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710428.1" /db_xref="GI:170782095" /db_xref="GeneID:6157483" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1812134..1812676) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(1812761..1812826) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(1812826..1812947) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(1812947..1813012) /locus_tag="CMS_1720" /old_locus_tag="CMS1720" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 1813195..1813626 /locus_tag="CMS_1721" /old_locus_tag="CMS1721" /db_xref="GeneID:6157484" CDS 1813195..1813626 /locus_tag="CMS_1721" /old_locus_tag="CMS1721" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710429.1" /db_xref="GI:170782096" /db_xref="GeneID:6157484" /translation="MADTLDDLLSADPHRIWQASREIIGTRDTALLDALRTALPAILR ATAGVELGGMMRPDRDALDHALRKVRDHRSWWCWCDDHPRLPSFDPTREEERGHARVL RRDRAAWPVTYECGCVVCGRRFDVEEGEHHALWWRWTARRR" gene complement(1813685..1815070) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /db_xref="GeneID:6157485" CDS complement(1813685..1815070) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /EC_number="6.1.1.14" /note="Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase" /protein_id="YP_001710430.1" /db_xref="GI:170782097" /db_xref="GeneID:6157485" /translation="MATPSRLDPVINLAKRRGFVFQAGEIYGGSRSAWDYGPLGVALK ENIKRQWWQTMVNGRDDVVGLDSSVILPRRVWEASGHVEVFSDPLVESLHTHKRYRAD HLLEAYEAKHGHPPVNGLADVNDPDTGQPGSWTEPQNFSGLLKTFLGPVDNQEGLHYL RPETAQGIFVNFANVLSAARQKPPFGIGQIGKSFRNEITPQNWIFRTREFEQMEMEFF VEPGTDAEWHQYWIDARYAWYTDLGIDPENLRLFEHPAAKLSHYSTRTVDIEYRFGFA GGAWGELEGIANRTDYDLRTHSEASGQDLSYFDQTKNERWIPYVIEPAAGLTRSMMAF LVDAYHEDEAPNAKGGVDKRTVLRLDRRLAPVKVAVLPLSRNEKLSPVARELAAELRK IWNIEFDDAGAIGRRYRRQDEIGTPFCVTIDFDTLDDRAVTVRERDTMAQERIPLDEL VGYLAGQLVGA" misc_feature complement(1813700..1813972) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /inference="protein motif:HMMPfam:PF03129" /note="HMMPfam hit to PF03129, Anticodon-binding, score 3.1e-28" misc_feature complement(1814333..1814977) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /inference="protein motif:HMMPfam:PF00587" /note="HMMPfam hit to PF00587, tRNA synthetases, class-II (G, H, P and S), score 3.3e-52" misc_feature complement(1814429..1814491) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." misc_feature complement(1814492..1814515) /gene="glyQS" /locus_tag="CMS_1722" /old_locus_tag="CMS1722" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1815182..1816216) /locus_tag="CMS_1723" /old_locus_tag="CMS1723" /db_xref="GeneID:6158729" CDS complement(1815182..1816216) /locus_tag="CMS_1723" /old_locus_tag="CMS1723" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710431.1" /db_xref="GI:170782098" /db_xref="GeneID:6158729" /translation="MGIVGYGLAGRVFHAPFLQASPDYRIALVSTSDAARAAQVRERH PGADVVASADELFARSAELDMVVIASPASAHLRQGLQALDAHLAVVMDKPFVATVDEA LMLIERAEALRIPFSVFQNRRLDGDFLTVKALIASGRLGEVHRFESTFERWGGPVRDR WQDRETPADAAGISYDLGSHLIDQALELFGPVADFASELATVRDGSASDDDAFYSLLH ESGVQSHITVSRVAALAGPRFRVLGTAGAYAVHGLDPQEPLLKEGAAPTDPGFGDAPE AEWGTLVEAAGDPSGERIPTERGRYADYYAAMADAVRGRGPVPVEPRDSLETVRIVEL AHRRSAGDED" misc_feature complement(1815491..1815823) /locus_tag="CMS_1723" /old_locus_tag="CMS1723" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 1.3e-12" misc_feature complement(1815857..1816216) /locus_tag="CMS_1723" /old_locus_tag="CMS1723" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 9.8e-17" gene complement(1816301..1817167) /gene="uppS" /locus_tag="CMS_1724" /old_locus_tag="CMS1724" /db_xref="GeneID:6157486" CDS complement(1816301..1817167) /gene="uppS" /locus_tag="CMS_1724" /old_locus_tag="CMS1724" /EC_number="2.5.1.31" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate synthetase" /protein_id="YP_001710432.1" /db_xref="GI:170782099" /db_xref="GeneID:6157486" /translation="MSRRPEVPGRTDLPLDWTGEQPPAIPADLVPKHIAVVMDGNGRW ANQRGLPRTAGHQAGEEAWFDTVAGAVQLGATHLSVYAFSTENWKRSPAEVRFLMGFN RDVIHRRRDQLNAWNVRIRWAGRRPRLWRSVIDDLQVAEEMTKGNTGMTLTMCINYGG RTEIGDAVKRIAEDVDAGRLKASRVDERTIQRYLYLPDVPDVDLFIRSSGEQRTSNFL LWQSAYAEMVFLDRLWPDFHRKDLWDAVESYVHRDRRFGGAVDAHAGDADEGSAEDPD ATPGDDPDAARQ" misc_feature complement(1816394..1817059) /gene="uppS" /locus_tag="CMS_1724" /old_locus_tag="CMS1724" /inference="protein motif:HMMPfam:PF01255" /note="HMMPfam hit to PF01255,Di-trans-poly-cis-decaprenylcistransferase, score 7.5e-117" gene complement(1817164..1818093) /gene="recO" /locus_tag="CMS_1725" /old_locus_tag="CMS1725" /db_xref="GeneID:6159087" CDS complement(1817164..1818093) /gene="recO" /locus_tag="CMS_1725" /old_locus_tag="CMS1725" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="YP_001710433.1" /db_xref="GI:170782100" /db_xref="GeneID:6159087" /translation="MPLYRDEIVVLRTHKLGEADRIVTMLSRQHGKIRAVAKGVRRTQ SKFGARLEPFMVADAQFFEGRTLDIITQAESIASYGALIAADYGSYTAASAMVETADR VTEDEGSLQQYLLLVGALRSLSRREHGASLTLDSYLLRSLSMAGWAPSFQDCAVTGAP GPHSAFVVQLGGVVADAAAPPGSPRLDVDTLALLSALLTGDWPHAEAATLRSQARASG VVAAYAQWHLDRGIRSLGLVDRSDARQLLPPTERPVPLDAPDVDGADPDPAAALAAAT ASVVRSTPRDADPDPDALPPTPADRPRAQETTR" misc_feature complement(1817353..1818093) /gene="recO" /locus_tag="CMS_1725" /old_locus_tag="CMS1725" /inference="protein motif:HMMPfam:PF02565" /note="HMMPfam hit to PF02565, Recombination protein O,RecO, score 8.1e-42" gene 1818212..1818889 /locus_tag="CMS_1726" /old_locus_tag="CMS1726" /db_xref="GeneID:6158924" CDS 1818212..1818889 /locus_tag="CMS_1726" /old_locus_tag="CMS1726" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710434.1" /db_xref="GI:170782101" /db_xref="GeneID:6158924" /translation="MDPVPLTIPLWADLLAVSIGSLQGAMFAAGFRDRRLDLLGVAII GTATGLGGGLLRDVFLNVTPAALSSNWLMLIAVAAALGGMLLERIFTRLDVVITALDA LTIGLFCAIGTSKALAAGVPEVPAVFIGVVSAVGGSFVRDLLLNLPIAMMHVGSLYAV AAGVGAVIVVLLAAFGVTMWVAAIVCVAVTATTRLLAVRFGWSLPEQRALSRLRFTAL RRPRPRR" misc_feature 1818236..1818499 /locus_tag="CMS_1726" /old_locus_tag="CMS1726" /inference="protein motif:HMMPfam:PF03458" /note="HMMPfam hit to PF03458, Protein of unknown function UPF0126, score 8.3e-08" misc_feature order(1818239..1818304,1818323..1818391,1818401..1818469, 1818494..1818553,1818563..1818631,1818668..1818736, 1818746..1818805) /locus_tag="CMS_1726" /old_locus_tag="CMS1726" /note="7 probable transmembrane helices predicted for CMS1726 by TMHMM2.0 at aa 10-31, 38-60, 64-86, 95-114,118-140, 153-175 and 179-198" misc_feature 1818500..1818757 /locus_tag="CMS_1726" /old_locus_tag="CMS1726" /inference="protein motif:HMMPfam:PF03458" /note="HMMPfam hit to PF03458, Protein of unknown function UPF0126, score 4.1e-09" gene complement(1818999..1820765) /gene="leuA" /locus_tag="CMS_1727" /old_locus_tag="CMS1727" /db_xref="GeneID:6157487" CDS complement(1818999..1820765) /gene="leuA" /locus_tag="CMS_1727" /old_locus_tag="CMS1727" /EC_number="2.3.3.13" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="YP_001710435.1" /db_xref="GI:170782102" /db_xref="GeneID:6157487" /translation="MKSTQTPSGMPIHKYRPFHEQITVDLRDRTWPARRITEAPRWCA VDLRDGNQALIDPMSPERKRIMFNLLVRMGYKEIEVGFPSASQTDFDFVRSLIEEGAI PDDVTIQVLTQAREHLIARTYESIRGAKQAIVHLYNSTSVLQREVVFRTDRQGIIDIA LEGARLCKRYEETIPETDVYYEYSPESYTGTELEFAAEICNRVVEVFDPTPERKVILN LPATVEMATPNVYADSIEWMCRHLDRRDEILVSLHPHNDRGTAVAAAELGYLAGADRI EGCLFGNGERTGNVDLVALGINLFTQGIDPQIDFSDLDGIKRTAEHCNQLAVPERSPW AGDLVYTAFSGSHQDAIKKGFEAMAVDAAAQGVTVDDIPWAVPYLPVDPQDLGRSYEA VIRVNSQSGKGGVAYLLKADHSLDLPRRLQIEFSGVVQAKTDAEGGEVTSAQIWSVFQ DEYLPAPLDRVEEKWGRFELTSTRTSSDMGGSVSLDVVLRDGDEVREASASGNGPIAA FLQVLADQGVEVRLLDYVEHALSASGDALAASYVELEVEGVRLWGVGIDEDSSTASLE AIVSGVNRAIRRTVREPELAAV" misc_feature complement(1819788..1820624) /gene="leuA" /locus_tag="CMS_1727" /old_locus_tag="CMS1727" /inference="protein motif:HMMPfam:PF00682" /note="HMMPfam hit to PF00682, HMG-CoA lyase-like, score 6.9e-90" misc_feature complement(1819977..1820018) /gene="leuA" /locus_tag="CMS_1727" /old_locus_tag="CMS1727" /note="PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2." misc_feature complement(1820577..1820627) /gene="leuA" /locus_tag="CMS_1727" /old_locus_tag="CMS1727" /note="PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1." gene complement(1820932..1823496) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /db_xref="GeneID:6158784" CDS complement(1820932..1823496) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710436.1" /db_xref="GI:170782103" /db_xref="GeneID:6158784" /translation="MTPRPRILTLQGAARALLTRLVAQRVTLGIALVILLLAVLPVVS APWRRVVHHELATGYEAVVERGHWWTTATAAFLTDGPVELVVSLLAVLVLVGVAEHLM GWWRTLLGFVLTGTVGSLLGIAVQALGLVDGELWSHGVRGVATADPLTAVAGVLALSS AWAGVMWRRRIRVVLVVVVLVFLLYSGQPSDLYRLLAILVGGVVGALLHRPAGGALWQ RSSHHEVRVMLAAVVAILGTGPVIALLSRSRYGPLAPIALLFVDDRVPGDAISTRCLS SDFTHDCLQEIMLARIGGGVGPILLSVAPLLALLVAAYGLARGRRFAVWLAVSVNTLL AVLSAYAFGMLVHRDMVSPRLSASPSAHPEAVAALVASVALPLGSAIVLVLLRRHFTI LSTAPAIRRFLVTTGVALAGLMALFVATGLALSDAFTRPVDLNDLLAEAPDRFIPASF LRGESLDFLPTDPITDVVYRGVGPAFWIILVIASLRAIADVRIAAVPRAQARVTPALR RGAIGSLSHMATWPGNSHWIAADGQTVVAYRVVASVAITTAAPLGPPADDGALRDVLG QFARFADDNGWTPVFYSVPASMTPLFRDMGWETLVVAEETVVRPGTWQTTGKKWQDVR TSINRADRAGIRAEWTTWAELPLAWASQIEQMSEEWVAEKELPEMGFTLGGVEELRDP AVRLMLAVDADDHVQAATSWLPTWRDGEVVGWTLDFMRRRPDGINGVMEFLIARSAMR MKDDGIEFMSLSAAPLAQTRAASPSGEQTDAGGDADDQESAVERILELLADSLEPVYG FRSLLEFKRKFQPELVPLIMAYPDPTALPTIGLALTRAYLPSTSVRDLTRVLRSAR" sig_peptide complement(1820932..1821066) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /note="Signal peptide predicted for CMS1728 by SignalP 2.0 HMM (Signal peptide probability 0.954) with cleavage site probability 0.522 between residues 45 and 46" misc_feature complement(1820977..1821309) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /inference="protein motif:HMMPfam:PF04331" /note="HMMPfam hit to PF04331, Protein of unknown function DUF472, score 2.9e-07" misc_feature complement(1821322..1821549) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /inference="protein motif:HMMPfam:PF04330" /note="HMMPfam hit to PF04330, Protein of unknown function DUF471, score 1.5e-10" misc_feature complement(1821553..1821999) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /inference="protein motif:HMMPfam:PF04329" /note="HMMPfam hit to PF04329, Protein of unknown function DUF470, score 1.1e-08" misc_feature complement(order(1822030..1822098,1822225..1822293, 1822339..1822407,1822465..1822533,1822546..1822614, 1822759..1822818,1822855..1822923,1822933..1822986, 1823005..1823073,1823116..1823184,1823203..1823271, 1823368..1823436)) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /note="12 probable transmembrane helices predicted for CMS1728 by TMHMM2.0 at aa 21-43, 76-98, 105-127, 142-164,171-188, 192-214, 227-246, 295-317, 322-344, 364-386,402-424 and 467-489" misc_feature complement(1822858..1823310) /locus_tag="CMS_1728" /old_locus_tag="CMS1728" /inference="protein motif:HMMPfam:PF01694" /note="HMMPfam hit to PF01694, Rhomboid-like protein,score 0.00017" gene complement(1823493..1824896) /locus_tag="CMS_1729" /old_locus_tag="CMS1729" /db_xref="GeneID:6157488" CDS complement(1823493..1824896) /locus_tag="CMS_1729" /old_locus_tag="CMS1729" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710437.1" /db_xref="GI:170782104" /db_xref="GeneID:6157488" /translation="MLHDLADLPIISASFVTASTVVPIVGLALLLLIARRARIRTGAR AAAPRRAARAILIGAVAGGLAGLALTWVLGDLLDLFGVILSVPTRVWTALGGLGLGVA GVVVARSRSAVTGVGGRGAPPRGLRILHTVLAVLIAPLVVFATAIGINADLQEYPNIA AAFGISRISPLDVSALPAPDAAGAPVDAASTAPVAETWRASENLPARGRVGSVTIPGT QSGFAARDGLVYLPPAALVSDAPALPVVVAMSGQPGSPLDLIASGRVDRVLDEYAAAN GGLAPIVVIPDHLGAQDANPMCVDSPLGNTSTYLTVDVPAWITAHLRVLPGADRWTIL GFSQGGTCAAQIGSARPDLFGTIVDISGEVAPTRGGDTVAAAFGGSQARYAAAFPAAI MESRAPYPDSTAFFCVGEVDQQYRPEVEQIEAAAKAAGMDTRMSTAPGRAHDWGAVNT CVHGILPPLGQRLGLTR" misc_feature complement(1823520..1824272) /locus_tag="CMS_1729" /old_locus_tag="CMS1729" /inference="protein motif:HMMPfam:PF00756" /note="HMMPfam hit to PF00756, Putative esterase, score 0.00032" misc_feature complement(order(1824447..1824515,1824576..1824632, 1824675..1824743,1824801..1824869)) /locus_tag="CMS_1729" /old_locus_tag="CMS1729" /note="4 probable transmembrane helices predicted for CMS1729 by TMHMM2.0 at aa 10-32, 52-74, 89-107 and 128-150" gene complement(1824977..1825663) /locus_tag="CMS_1730" /old_locus_tag="CMS1730" /db_xref="GeneID:6157489" CDS complement(1824977..1825663) /locus_tag="CMS_1730" /old_locus_tag="CMS1730" /codon_start=1 /transl_table=11 /product="putative two component system response regulator" /protein_id="YP_001710438.1" /db_xref="GI:170782105" /db_xref="GeneID:6157489" /translation="MPTPPIRVALVDDQALFRTGVRMLISSQPDLEFAGEAANGQEAV ELARTERPDVILMDIRMPVMDGIHATAEVLRTADASGERPPRVLVLTTFDLDESAARA IRAGASGFVLKDADPEFLLAAIRTVHAGNSVIAASATRQLLEHFDPGSRPRVAPPAFA SLTSREREIFVLAARGLSNAEIAQAEFLSEATVKTHVSRILAKLSLRDRVQLVVFAFE HRLNGSPSQG" misc_feature complement(1825016..1825189) /locus_tag="CMS_1730" /old_locus_tag="CMS1730" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 1.4e-22" misc_feature complement(1825070..1825135) /locus_tag="CMS_1730" /old_locus_tag="CMS1730" /note="Predicted helix-turn-helix motif with score 1165.000, SD 3.15 at aa 177-198, sequence LSNAEIAQAEFLSEATVKTHVS" misc_feature complement(1825268..1825648) /locus_tag="CMS_1730" /old_locus_tag="CMS1730" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.4e-31" gene complement(1825714..1827216) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /db_xref="GeneID:6157490" CDS complement(1825714..1827216) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /codon_start=1 /transl_table=11 /product="putative two component sensor kinase" /protein_id="YP_001710439.1" /db_xref="GI:170782106" /db_xref="GeneID:6157490" /translation="MLRRIPRYQLVLDIVLAVAFVALLAPGSIGVAAASAFGVFASTT SEVSVILVLVMGAALAVRRVSPGLSLAVAWAGAIIQMGAGAGVEPGDLAVAGVVYCTA AYGGRVVRTLGLVSAILGGVVAATYLSYASGRVPIGSAAFSTGEWTAFATLFLFLLLC AWSVLLASWTAGRLVVASRASHASRDAQEAAERDQARALQDVVVEQERNRIARDMHDV VAHSLAVVIAQADGARYARLVDPEAADEALRTISTTARQALGDVRILLAQLRHSEDDA PQPELKELSDLIDQMRSTGLTIQFVETGQPGEFGTGQQLAVYRIVQEALTNVLRHGDV AHPVEVELVWEPDGVSVSVQSRTLPDPVRPPRTTTGIIALPVLPPVPAAPAQPVGHGL AGMRERATLSGGRFSAGVREGVWTVSAWIPFAPATRPVPRVPVVGASVGTGADAPSRP LTLDELFPPEAAAAGTATPAAPVSPHRTAAARGVAASAARRARDDRPAGS" sig_peptide complement(1825714..1825812) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /note="Signal peptide predicted for CMS1731 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.484 between residues 33 and 34" misc_feature complement(1825945..1826283) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 6.4e-07" misc_feature complement(1826395..1826598) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature complement(order(1826701..1826769,1826830..1826898, 1826956..1827015,1827034..1827102,1827115..1827183)) /locus_tag="CMS_1731" /old_locus_tag="CMS1731" /note="5 probable transmembrane helices predicted for CMS1731 by TMHMM2.0 at aa 12-34, 39-61, 68-87, 107-129 and 150-172" gene complement(1827327..1828406) /gene="era" /locus_tag="CMS_1732" /old_locus_tag="CMS1732" /db_xref="GeneID:6157491" CDS complement(1827327..1828406) /gene="era" /locus_tag="CMS_1732" /old_locus_tag="CMS1732" /note="Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome" /codon_start=1 /transl_table=11 /product="GTP-binding protein Era" /protein_id="YP_001710440.1" /db_xref="GI:170782107" /db_xref="GeneID:6157491" /translation="MTDPRDDETPADETRTETTAADATADDATDATATAEPAPLSDEA WGIDRAAEPSRSKRKPRGGAPAYRAGFVSFVGRPNVGKSTLTNALVGEKVAITSSKPQ TTRKAIRGIVHRPDGQLILVDTPGIHRPRTLLGERLNALVQTTLGDVDVIGLCIPADE RIGPGDRFINEQLDEYPRARKIAIVTKTDSASRHAVAEQLLAVQELREWDAIVPVSAV EAIQLDALVGELLKALPVSEQLYPSDAVTEEGLEARISELIREAALEGVQDELPHSLA VTIDDMIQREDKELLEIYANLFVERDSQKGIVIGAQGSRLKHVGQVARAQIEPLVGTR VFLSLRVKIAKDWQRDPKLLGRLGF" misc_feature complement(1827330..1827524) /gene="era" /locus_tag="CMS_1732" /old_locus_tag="CMS1732" /inference="protein motif:HMMPfam:PF07650" /note="HMMPfam hit to PF07650, KH, type 2, score 7.9e-19" misc_feature complement(1827840..1828199) /gene="era" /locus_tag="CMS_1732" /old_locus_tag="CMS1732" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 1e-33" misc_feature complement(1828158..1828181) /gene="era" /locus_tag="CMS_1732" /old_locus_tag="CMS1732" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1828399..1829721) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /db_xref="GeneID:6157492" CDS complement(1828399..1829721) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710441.1" /db_xref="GI:170782108" /db_xref="GeneID:6157492" /translation="MLTLLLPAFLLVVLGGLFAAAESAISSLSRADIQELALTSRARR SMLAISTDTGAYVNALGFVRIIAETGAAVLVTLALASAIDEWWITLLVAAAIMTAVSF VLVGASPRSVGRVHARPLLAWTAPLVRVIRVAIGPVADALVALGNRVTPGRPKTVATF TSEEQLLSMVDEATELEVLEEDDRELIHSIFEFNDTVVREVMIPRTDMVVVEQTAHVG SALGLFLSRGISRAPVTGRDSDEIEGVLYLRDLARMVYERPEEAERTTVDQLARPAVF VPESQKADALLRQMQLESNHLAMVVDEYGGIAGLVTLEDLIEELVGDISDEYDRDVPE YEDLGDGVYRVSARLPIDELGDLFGLELDDDDVDSAGGLLAKTLGRLPERGSVVRVGG LVLTADRVEGRRTRISTILVERDRVDDASDDHEAAPAGTATSRGHDHD" sig_peptide complement(1828399..1828470) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /note="Signal peptide predicted for CMS1733 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.381 between residues 24 and 25" misc_feature complement(1828474..1828716) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /inference="protein motif:HMMPfam:PF03471" /note="HMMPfam hit to PF03471, Transporter-associated region, score 7.4e-18" misc_feature complement(1828759..1828920) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 6.8e-09" misc_feature complement(1828954..1829118) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 5.5e-10" misc_feature complement(1829173..1829715) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /inference="protein motif:HMMPfam:PF01595" /note="HMMPfam hit to PF01595, Protein of unknown function DUF21, score 4.4e-12" misc_feature complement(order(1829398..1829466,1829476..1829544, 1829644..1829712)) /locus_tag="CMS_1733" /old_locus_tag="CMS1733" /note="3 probable transmembrane helices predicted for CMS1733 by TMHMM2.0 at aa 4-26, 60-82 and 86-108" gene complement(1829731..1830192) /locus_tag="CMS_1734" /old_locus_tag="CMS1734" /db_xref="GeneID:6157493" CDS complement(1829731..1830192) /locus_tag="CMS_1734" /old_locus_tag="CMS1734" /codon_start=1 /transl_table=11 /product="putative metalloprotease" /protein_id="YP_001710442.1" /db_xref="GI:170782109" /db_xref="GeneID:6157493" /translation="MSIEINNESAVEVDEPLIQRLATYALDTLHVHPDAELAIVMVDE GAMEQLHVQWMDEPGPTDVLSFPMDELRPGTEDRPTPAGLLGDIVVCPQVAAEQAVTA GHSTMEEILLLTAHGILHLLGFDHAEPDEEREMFGLQRDILIGFAMSERGR" misc_feature complement(1829776..1830075) /locus_tag="CMS_1734" /old_locus_tag="CMS1734" /inference="protein motif:HMMPfam:PF02130" /note="HMMPfam hit to PF02130, Protein of unknown function UPF0054, score 1.2e-36" misc_feature complement(1829815..1829847) /locus_tag="CMS_1734" /old_locus_tag="CMS1734" /note="PS01306 Uncharacterized protein family UPF0054 signature." gene complement(1830189..1831238) /locus_tag="CMS_1735" /old_locus_tag="CMS1735" /db_xref="GeneID:6157494" CDS complement(1830189..1831238) /locus_tag="CMS_1735" /old_locus_tag="CMS1735" /codon_start=1 /transl_table=11 /product="PhoH-like protein" /protein_id="YP_001710443.1" /db_xref="GI:170782110" /db_xref="GeneID:6157494" /translation="MSGSDPRGGASTQDDRVEQTATMDGVLMVRLLGPQDRLLRQIER EHPDVDVRVRGNEITLVGTRADVAAARRLIDEVVAMVEDGQHVEPQEIETSARRLGED DARTLSDVLSEAIVQSRGRTVRPKTQGQKQYVQAIDDHTIVFGIGPAGTGKTYLAMAK AVQALQRKEVERIILTRPAVEAGERLGYLPGSLTDKIDPYLSPLFDALNEMMDPELVP KLLASNTIEVAPLAYMRGRTLNNAFVVLDEAQNTTPEQMKMFLTRLGFGSKMVVTGDI TQVDLPTGSSGLQLVTRVLDGMDDIHFSRLTSDDVVRHTLVGRIVDAYTRYDAERQAA DHLRAERRSTPGSTR" misc_feature complement(1830264..1830875) /locus_tag="CMS_1735" /old_locus_tag="CMS1735" /inference="protein motif:HMMPfam:PF02562" /note="HMMPfam hit to PF02562, PhoH-like protein, score 1.5e-133" misc_feature complement(1830777..1830800) /locus_tag="CMS_1735" /old_locus_tag="CMS1735" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1831017..1831187) /locus_tag="CMS_1735" /old_locus_tag="CMS1735" /inference="protein motif:HMMPfam:PF00013" /note="HMMPfam hit to PF00013, KH, type 1, score 0.0001" gene complement(1831225..1831581) /locus_tag="CMS_1736" /old_locus_tag="CMS1736" /db_xref="GeneID:6157495" CDS complement(1831225..1831581) /locus_tag="CMS_1736" /old_locus_tag="CMS1736" /codon_start=1 /transl_table=11 /product="putative Hit-family protein" /protein_id="YP_001710444.1" /db_xref="GI:170782111" /db_xref="GeneID:6157495" /translation="MTSSAEPTVFERIVAREIPARIVAETDRVIAFEDIAPQAPVHVL VVPKTAAYRDVVELAAGDPALLAEIVSVASRIAAERAGGQFRLLFNTGADAGQTVFHV HAHVLAGFDQGDHVGL" misc_feature complement(1831246..1831560) /locus_tag="CMS_1736" /old_locus_tag="CMS1736" /inference="protein motif:HMMPfam:PF01230" /note="HMMPfam hit to PF01230, Histidine triad (HIT) protein, score 4.5e-33" gene complement(1831610..1832374) /locus_tag="CMS_1737" /old_locus_tag="CMS1737" /db_xref="GeneID:6157496" CDS complement(1831610..1832374) /locus_tag="CMS_1737" /old_locus_tag="CMS1737" /note="in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase" /codon_start=1 /transl_table=11 /product="16S ribosomal RNA methyltransferase RsmE" /protein_id="YP_001710445.2" /db_xref="GI:228861774" /db_xref="GeneID:6157496" /translation="MAHFYLADDIGASDLAVGRLLVLAGQEARHAVTVSRVRSGEGIL VGDGRGTIASGTVTSAEPQRLELRVDAVEAHPEPSPRVVLVQALAKGDRDELAVQAAT ELGVDAVIPWQAQRSVSRWEGQKVAKGRDRWRAIVREAAKQSIRPRVPEVEPLATTKD LVRMAATFRVLVLVLDPTAEARLSRLDLAAADGDADAATDVLLVVGPEGGISPAEVEA LREAGAIPVALGSGILRTSTAGPAALALVNAGLGRW" misc_feature complement(1831631..1831975) /locus_tag="CMS_1737" /old_locus_tag="CMS1737" /inference="protein motif:HMMPfam:PF04452" /note="HMMPfam hit to PF04452, Protein of unknown function DUF558, score 5.2e-30" gene complement(1832377..1833492) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /db_xref="GeneID:6157497" CDS complement(1832377..1833492) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /codon_start=1 /transl_table=11 /product="DnaJ chaperone protein" /protein_id="YP_001710446.1" /db_xref="GI:170782113" /db_xref="GeneID:6157497" /translation="MADHYEVLGVSREATPEEIKKAYRKQARQLHPDVNDAPDAAERF KLVTHAYDVLSDPQQRQQYDLGPQAGFGGQGGQGFGGFGDIFETFFGGQQGGGGRGPR SRQERGQDALLRVEVELKEVIFGVHRDLEVDTAVVCDTCHGSCAQPGTSAVTCDICRG SGSIQRQVRSLLGNVMTSSPCGTCRGYGTVIPHPCPTCQGQGRVRARRTVPVDIPAGV DTGLRLQMPGSGEVGPAGGPNGDLYLEIKVKHHEVFSRNGDDLLATVEVSMVDAILGS DAHIEALDGDVDLELRPGIQSAEIITVRGRGVTKLRGSGRGDLKIGIQVVTPQKLDHK ERDLIQQFAKRNKAPAPHLAHFQQGLFQKLRDRFLNV" misc_feature complement(1832464..1832829) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /inference="protein motif:HMMPfam:PF01556" /note="HMMPfam hit to PF01556, Chaperone DnaJ, C-terminal,score 1.7e-43" misc_feature complement(1832866..1833120) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /inference="protein motif:HMMPfam:PF00684" /note="HMMPfam hit to PF00684, DnaJ central region, score 9e-23" misc_feature complement(1833292..1833486) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /inference="protein motif:HMMPfam:PF00226" /note="HMMPfam hit to PF00226, Heat shock protein DnaJ,N-terminal, score 5.6e-34" misc_feature complement(1833304..1833363) /locus_tag="CMS_1738" /old_locus_tag="CMS1738" /note="PS00636 Nt-dnaJ domain signature." gene complement(1833553..1834576) /gene="hrcA" /locus_tag="CMS_1739" /old_locus_tag="CMS1739" /pseudo /db_xref="GeneID:6157498" misc_feature complement(1833614..1834279) /gene="hrcA" /locus_tag="CMS_1739" /old_locus_tag="CMS1739" /inference="protein motif:HMMPfam:PF01628" /note="HMMPfam hit to PF01628, Negative regulator of class I heat shock protein, score 2.1e-52" /pseudo gene 1834763..1835158 /locus_tag="CMS_1740" /old_locus_tag="CMS1740" /db_xref="GeneID:6158759" CDS 1834763..1835158 /locus_tag="CMS_1740" /old_locus_tag="CMS1740" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710447.1" /db_xref="GI:170782114" /db_xref="GeneID:6158759" /translation="MSAPDPHPYGAPTPLTPSEDRLWASLTHFLAILIVPAFIVWLVF RERGRFTDQEGKEATNWTINVVGALVILNVLQVVFGVIPILGVIIGLLLGLVIFAVVV VNIVFAIIGGTRVQAGRPYRYPLNIRWIK" misc_feature order(1834826..1834894,1834955..1835023,1835033..1835101) /locus_tag="CMS_1740" /old_locus_tag="CMS1740" /note="3 probable transmembrane helices predicted for CMS1740 by TMHMM2.0 at aa 22-44, 65-87 and 91-113" gene 1835181..1835582 /locus_tag="CMS_1741" /old_locus_tag="CMS1741" /db_xref="GeneID:6157499" CDS 1835181..1835582 /locus_tag="CMS_1741" /old_locus_tag="CMS1741" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710448.1" /db_xref="GI:170782115" /db_xref="GeneID:6157499" /translation="MRHVAVDCRDPHALSLFWAGVTGFEEDPEEPNVPGDGMAWLGDP VSGLGIILQRTESPTTGKNRVHLDLAPDDRTRDEEVERVLALGAALVADRRNADGSGW VVLADPEGNEFCVERSDAEREAGDEVGAVVL" gene complement(1835597..1836820) /gene="hemN" /locus_tag="CMS_1742" /old_locus_tag="CMS1742" /db_xref="GeneID:6157500" CDS complement(1835597..1836820) /gene="hemN" /locus_tag="CMS_1742" /old_locus_tag="CMS1742" /EC_number="1.3.99.22" /note="catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="YP_001710449.1" /db_xref="GI:170782116" /db_xref="GeneID:6157500" /translation="MPSALPLADPAPADGLLPASAAEGADARAFGVYLHVPFCRVRCG YCDFNTYTAPELRGVKQSDYASQAVQEVRFAGSALRESGVPARPASTVFLGGGTPTLL PVEDLVRMLDAVRDTWGIAEGAEVTTEANPDSVDDAYLAALAAGGFTRVSFGMQSAVP RVLATLERTHDPARIAPVVRGARAAGLEVSLDLIYGTPGETIDDWRASLEQAIAQEPD HLSAYALIVEPGTKLARQIRRGEVPEPDEDLQADMYELADRMLGEAGYEWYEVSNWAR DGRRSRHNLAYWQGHDWWGVGPGAHSHVGGVRWWNVKHPAAHADRVLAGASPGAGRES LDDATREVERVLLGARIRDGLAIPTLTAEGRRQVAGLIADGLVEPRAALSGTLVLTLQ GRLLADSVVRRLLED" misc_feature complement(1835636..1835968) /gene="hemN" /locus_tag="CMS_1742" /old_locus_tag="CMS1742" /inference="protein motif:HMMPfam:PF06969" /note="HMMPfam hit to PF06969, HemN, C-terminal, score 9.6e-25" misc_feature complement(1836185..1836724) /gene="hemN" /locus_tag="CMS_1742" /old_locus_tag="CMS1742" /inference="protein motif:HMMPfam:PF04055" /note="HMMPfam hit to PF04055, Radical SAM, score 2.3e-25" gene 1836903..1837604 /locus_tag="CMS_1743" /old_locus_tag="CMS1743" /db_xref="GeneID:6158747" CDS 1836903..1837604 /locus_tag="CMS_1743" /old_locus_tag="CMS1743" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710450.1" /db_xref="GI:170782117" /db_xref="GeneID:6158747" /translation="MTDAPTPRPLHVLWDVDGTLLLNGPRAGSMYHRAIELAAGEELE DRTVHAHGKTDGQIIWETLDLYGMPASLHAAVREQLEGMSRVEHYGAGRREVPVGVPR LVADVAARGWINALLTGNSPLRARYKLDGAGLDVDLFDWDASFFGHQARIRSDLTRRA AEALAGATVVIIGDTPADGVAAEAAGFPFVAVATGAYGVAELRAPDAHAALVVPDLAV GHDEVMAYLDGLAAR" misc_feature 1836927..1837487 /locus_tag="CMS_1743" /old_locus_tag="CMS1743" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 5.7e-10" gene complement(1837626..1838207) /locus_tag="CMS_1744" /old_locus_tag="CMS1744" /db_xref="GeneID:6157501" CDS complement(1837626..1838207) /locus_tag="CMS_1744" /old_locus_tag="CMS1744" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710451.1" /db_xref="GI:170782118" /db_xref="GeneID:6157501" /translation="MTYPPEGYRPAEASARLGSGDERFEQAVALLMTWGVQRGSGIEV TRIEQEVPDDPGYTGLEFDEDGVPQVPVDRPRETLYGDDGTAWITSGTSAVLRMPFGP FRPEAPVRVVYTVQETDRVGFAYGTVHGHPLSGEEAFLVSREPDGSVWLTLRVFSRPA SWPMRLASPVLRIIQGVFMRRYLKALHPAVASA" gene 1838694..1839467 /locus_tag="CMS_1745" /old_locus_tag="CMS1745" /db_xref="GeneID:6157502" CDS 1838694..1839467 /locus_tag="CMS_1745" /old_locus_tag="CMS1745" /note="one of 4 tandemly repeated diveregnt CDSs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710452.1" /db_xref="GI:170782119" /db_xref="GeneID:6157502" /translation="MNRSIPALAIAGALVLGSAIVAAPAQATPGDGTYYSVPGTSFLF TVDAVDGKPALGVATYEEWQEDGFPSPRPAAVEYLKYTWDSTIYQDATVDGVSFSTRI DYATWRSVGFPAPRTDRLAADSEIHRYTGSDELFVWAGAAFTDDPAVHKLTFAEFAHL GYPAVDYESEPEFRKLSWSPNIVGPVDQAGTIGVVDFATWDYYARPTPQIVTSFDGDR FCKAAGSADIRYVGIAAPKGVKLSYAQWREAGFPAPGRC" sig_peptide 1838694..1838774 /locus_tag="CMS_1745" /old_locus_tag="CMS1745" /note="Signal peptide predicted for CMS1745 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.970 between residues 27 and 28" misc_feature 1838706..1838774 /locus_tag="CMS_1745" /old_locus_tag="CMS1745" /note="1 probable transmembrane helix predicted for CMS1745 by TMHMM2.0 at aa 5-27" gene 1839524..1840330 /locus_tag="CMS_1746" /old_locus_tag="CMS1746" /db_xref="GeneID:6157503" CDS 1839524..1840330 /locus_tag="CMS_1746" /old_locus_tag="CMS1746" /note="one of 4 tandemly repeated diveregnt CDSs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710453.1" /db_xref="GI:170782120" /db_xref="GeneID:6157503" /translation="MTPSPRKATVNRSIPALVLAGALVLGGALVASPAQAAPKHSAYY SVPFSGDLYVTDATGGEKYATPAYFEDWKADGFPQPVAATISYRGFTWTEDIYADIQT EPGAASTLGLTYSQWSAAGSPKPTKNVLPVNAGVFKYSYSDELFVFVFVFSFGDDVPV NHKLTFAEYAALGYPSSDVREGGFRKLSWLPAIVGPTVPSYEVVAIDFWTWEYWGTPT PQIVKSFDGDRFCKAPGSADIRYVGIAAPDGVKLTFSQWREAGFPAPARC" sig_peptide 1839524..1839631 /locus_tag="CMS_1746" /old_locus_tag="CMS1746" /note="Signal peptide predicted for CMS1746 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 between residues 36 and 37" misc_feature 1839560..1839628 /locus_tag="CMS_1746" /old_locus_tag="CMS1746" /note="1 probable transmembrane helix predicted for CMS1746 by TMHMM2.0 at aa 13-35" gene 1840400..1841176 /locus_tag="CMS_1747" /old_locus_tag="CMS1747" /db_xref="GeneID:6157504" CDS 1840400..1841176 /locus_tag="CMS_1747" /old_locus_tag="CMS1747" /note="one of 4 tandemly repeated diveregnt CDSs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710454.1" /db_xref="GI:170782121" /db_xref="GeneID:6157504" /translation="MNRSFAVIVAGALALGTTLTAAPALAATAAAAPSGASYYSLPFT DDLYRVAGDAEPMAASYDEWKADGFPSPVRASFTTLKYTWAPEIYADVDLPGQAITLG LDYAGWRAAGFPTPRTDVLASGTFIFKYASSDELFASTVRWQTDTADFHKLTYAEWTR IGSPAADLGGDVSYEKLSWLSTIIGPDYQTGERGFVDYDEWVYLDRPTPRVVASFRGD RYCQAAGSDDIVYRGDAAPQGLTMSYSQWVAAGKPARTRC" sig_peptide 1840400..1840492 /locus_tag="CMS_1747" /old_locus_tag="CMS1747" /note="Signal peptide predicted for CMS1747 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.820 between residues 31 and 32" misc_feature 1840412..1840480 /locus_tag="CMS_1747" /old_locus_tag="CMS1747" /note="1 probable transmembrane helix predicted for CMS1747 by TMHMM2.0 at aa 5-27" gene 1841277..1842104 /locus_tag="CMS_1748" /old_locus_tag="CMS1748" /db_xref="GeneID:6157505" CDS 1841277..1842104 /locus_tag="CMS_1748" /old_locus_tag="CMS1748" /note="one of 4 tandemly repeated diveregnt CDSs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710455.1" /db_xref="GI:170782122" /db_xref="GeneID:6157505" /translation="MNRPLTSLALVGALLVGGALAAAPANAVGDDGTVVYYSLPFRSD LVRVEQPSDQPQALITTATYAQWQADGFPAPAAAGVTYHAYTWSPDVLADLTFGTDDR AEATRLSFAEWQRVGSPRPVTTSLPEVGYAFSYGSSSEVFVDTFLLFLHGGTPLTAPT HKLTYAEYVHLGSAELAYNVADNYPFSGMFMRKLAWSPAIVWEIPQNGSGDLLSYDDW AARAFPTPQVVKSFPGDRYCQAAGSSDITYRGYAAPGGVKMSYSQWAAAGRPAPARC" sig_peptide 1841277..1841357 /locus_tag="CMS_1748" /old_locus_tag="CMS1748" /note="Signal peptide predicted for CMS1748 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.550 between residues 27 and 28" misc_feature 1841295..1841363 /locus_tag="CMS_1748" /old_locus_tag="CMS1748" /note="1 probable transmembrane helix predicted for tmhmm2embl_unknown_001727_1841211_1842038 by TMHMM2.0 at aa 7-29" gene complement(1842175..1844022) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /db_xref="GeneID:6157506" CDS complement(1842175..1844022) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /note="binds to the ribosome on the universally-conserved alpha-sarcin loop" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /protein_id="YP_001710456.1" /db_xref="GI:170782123" /db_xref="GeneID:6157506" /translation="MSPLATKALRPAATDPASIRNFCIIAHIDHGKSTLADRMLQMTG VVDSRSMRAQYLDRMDIERERGITIKSQAVRMPWELDGQTYALNMIDTPGHVDFSYEV SRSLAACEGAILLVDAAQGIEAQTLANLYLALENDLTIIPVLNKIDLPAADPDKYAAE LASLIGGDPSDVLRVSGKTGAGVEDLLDRVSRTIPAPVGDPDAAARAMIFDSVYDAYR GVVTYVRMIDGKLSPREKISMMSTRATHEILEIGVSSPEPTPSDGLGVGEVGYLITGV KDVRQSKVGDTVTTAARPATEALPGYTEPLPMVFSGLYPIDGSDYPDLRDALDKLKLS DAALVYEPETSVALGFGFRCGFLGLLHLEIITERLSREFGLDLITTAPSVIYEVTSED KKTVTVTNPSEFPGGKIVSVSEPVVKAAILAPKDYVGTIMELCQSRRGILLGMEYLGE DRVEIRYTMPLGEIVFDFFDNLKSKTAGYASLDYEPAGSQDSDLVKVDILLQGEQVDA FSAIVHRDKAYAYGVLMTGRLRELIPRQQFEVPIQAAIGARIIARESIRAMRKDVLAK CYGGDITRKRKLLEKQKEGKKRMKMVGRVEVPQEAFIAALSGDTEKKAK" misc_feature complement(1842196..1842522) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /inference="protein motif:HMMPfam:PF06421" /note="HMMPfam hit to PF06421, GTP-binding protein LepA,score 9.6e-77" misc_feature complement(1842523..1842792) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /inference="protein motif:HMMPfam:PF00679" /note="HMMPfam hit to PF00679, Elongation factor G,C-terminal, score 3.4e-36" misc_feature complement(1843156..1843368) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 3.2e-05" misc_feature complement(1843429..1843974) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 5.1e-68" misc_feature complement(1843807..1843854) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /note="PS00301 GTP-binding elongation factors signature." misc_feature complement(1843924..1843947) /gene="lepA" /locus_tag="CMS_1749" /old_locus_tag="CMS1749" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(1844122..1844745) /locus_tag="CMS_1750" /old_locus_tag="CMS1750" /db_xref="GeneID:6158783" CDS complement(1844122..1844745) /locus_tag="CMS_1750" /old_locus_tag="CMS1750" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710457.1" /db_xref="GI:170782124" /db_xref="GeneID:6158783" /translation="MGLAASAVTAAVVGAALVGRPSGGRAPTPAAPVGDAPFDVDIAR GAFVHGVIDYDPYSDTTAMAAASDAVVVGTVVRVRDARVPQPGGTAGSRWDTVLVELR VDRVASGTARWQVDGRIIIEVQRPGATLEEQRAALPSGTRMVAYLDSAQDFLDVPGGA VAFSRPVGVQAVTVQGSDGGPLVRPLLGQTEDADLDDALPGGAAIGF" misc_feature complement(1844689..1844745) /locus_tag="CMS_1750" /old_locus_tag="CMS1750" /note="1 probable transmembrane helix predicted for CMS1750 by TMHMM2.0 at aa 54-76" gene complement(1844909..1845520) /locus_tag="CMS_1751" /old_locus_tag="CMS1751" /db_xref="GeneID:6157507" CDS complement(1844909..1845520) /locus_tag="CMS_1751" /old_locus_tag="CMS1751" /codon_start=1 /transl_table=11 /product="putative sigma factor" /protein_id="YP_001710458.1" /db_xref="GI:170782125" /db_xref="GeneID:6157507" /translation="MERESTDPRRAIPDVSTDSDIIERSSTTPRAFAELYDRHAPTVH RYAARAVGMQAADDVMSSTFLVAFERRTTYDLERPDALPWLLGIATNLLHRHRRSDAH ARRGMAAFHDASVPLDDEAAASDRLDAARGIDAVRAELARMPDRERDVLLLHAWGGLD HAGIARVLGIPEGTVGSRLHRARRRLRPLVEDAQGARSGADDG" misc_feature complement(1844957..1845106) /locus_tag="CMS_1751" /old_locus_tag="CMS1751" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 8e-13" misc_feature complement(1845212..1845418) /locus_tag="CMS_1751" /old_locus_tag="CMS1751" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 7.7e-12" gene complement(1845566..1846543) /locus_tag="CMS_1752" /old_locus_tag="CMS1752" /db_xref="GeneID:6157508" CDS complement(1845566..1846543) /locus_tag="CMS_1752" /old_locus_tag="CMS1752" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710459.1" /db_xref="GI:170782126" /db_xref="GeneID:6157508" /translation="MSDAAGEASARIAVVAGASGFIGQVLVRELSDEGYRVLTIGRSG ADARWGDEDGIRRIVDGADLLVNLAGKSVNCRYGAANRREILLSRVETTAELARAVAD SARPVPVWINASTATVYRHATDRPQTESTGELGDDFSPSVGRAWERAFFAPDLPATRR VALRIAIVLGRDGALQPLLGLARFGLGGPQLDGRFPGRPSRIRAGAHHVHQPTHGRQV FSWLHIDDLVGIIRFVRDTASLEGPVNASSPAPVTNRRLMKVLRRAVGMPVGLAANRW MLEVGMWLFRTEPELVLKSRWVVPETLEAAGYRFRWPELDAAVDDIVRR" misc_feature complement(1846208..1846273) /locus_tag="CMS_1752" /old_locus_tag="CMS1752" /note="Predicted helix-turn-helix motif with score 1007.000, SD 2.62 at aa 91-112, sequence ETTAELARAVADSARPVPVWIN" misc_feature complement(1846469..1846516) /locus_tag="CMS_1752" /old_locus_tag="CMS1752" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(1846540..1847799) /locus_tag="CMS_1753" /old_locus_tag="CMS1753" /db_xref="GeneID:6157509" CDS complement(1846540..1847799) /locus_tag="CMS_1753" /old_locus_tag="CMS1753" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710460.1" /db_xref="GI:170782127" /db_xref="GeneID:6157509" /translation="MPISDSADPVRASASSVTAIVGGHVVPVDGAPIPGGTVLLRDGL VAAVGQAGDVDVPEGATVIDASGRWVLPGFVEAHGHVGIHEEANGPAGNDTNEMTDPD MSSVRAIDAIDIDDEGFRDALKGGVTTIVVKPGSGNPIGGQSVAIKSWGGRTIDEQLV SDSVSVKSALGENPKRVYGDKGKTPSTRLGVAMVIRRAFRDAEDYRAARDHAEKEGTP FSRDLGKETLVRVLDGELAWDQHTHRHDDIATAIRLADEFGYRLVVNHGTEGDKIADV LAERGIPVIFGPMITSRSKVELRDRAVANLAALHRAGVLVAITTDAPVVPIDFLVHQA SFAVKDGLPADVALRAITANPAMILRLDHRVGALTPGLDADVVIWSGDPLDVRSRAEH VIIGGDTVYTWADGQGTTVERRTRFGA" misc_feature complement(1846660..1847595) /locus_tag="CMS_1753" /old_locus_tag="CMS1753" /inference="protein motif:HMMPfam:PF01979" /note="HMMPfam hit to PF01979, Amidohydrolase, score 4.8e-05" gene 1847833..1848399 /locus_tag="CMS_1754" /old_locus_tag="CMS1754" /db_xref="GeneID:6157510" CDS 1847833..1848399 /locus_tag="CMS_1754" /old_locus_tag="CMS1754" /codon_start=1 /transl_table=11 /product="putative NUDIX hydrolase" /protein_id="YP_001710461.1" /db_xref="GI:170782128" /db_xref="GeneID:6157510" /translation="MRRAGRADAGCRYARVMGIPDFVVSLRERIGTTPLWLSGVTAVI LDGPRVLLVRRGDTGAWAPVTGILDPGEEPAVAAWREAQEETGVTVEVERLVGVGTTG EITYPNGDRASYLDLTFRCRYASGEARVNDDESLEVAWWPVDALPDMSADFLARIRNA LDDEPETRFVRPGDDLPGHDHDARGSAA" misc_feature 1847938..1848312 /locus_tag="CMS_1754" /old_locus_tag="CMS1754" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 2.9e-23" gene 1848535..1848798 /gene="rpsT" /locus_tag="CMS_1755" /old_locus_tag="CMS1755" /db_xref="GeneID:6157511" CDS 1848535..1848798 /gene="rpsT" /locus_tag="CMS_1755" /old_locus_tag="CMS1755" /note="binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S20" /protein_id="YP_001710462.1" /db_xref="GI:170782129" /db_xref="GeneID:6157511" /translation="MANIKSQIKRIGTNKKAQERNKAVKSELKTAIRSVKTAISAGDK DAAVKAVSLAGKKLDKAASKGVIHKNQAANRKGAIAKQVAKIG" misc_feature 1848538..1848789 /gene="rpsT" /locus_tag="CMS_1755" /old_locus_tag="CMS1755" /inference="protein motif:HMMPfam:PF01649" /note="HMMPfam hit to PF01649, Ribosomal protein S20,score 8.6e-30" gene complement(1848911..1849939) /locus_tag="CMS_1756" /old_locus_tag="CMS1756" /db_xref="GeneID:6158970" CDS complement(1848911..1849939) /locus_tag="CMS_1756" /old_locus_tag="CMS1756" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710463.1" /db_xref="GI:170782130" /db_xref="GeneID:6158970" /translation="MATRTSRTTAAKPSAAIPQLAWDAVRPAAVVLVSGTEALLADRA MRRLRDILTAEDPRIEVSDIEADSYAPGELITLASPSLFAEPRLIRVVNVEKCSDQFL LDAVAYLEQPADNTYVVLRHAGGVRGKKLLDAVRSGQGGGIEVVCAELKKDSEKHDFA VAEFRAAKRSITPGAVRQLVAAFQDDVSELASACQQLISDTAHEITEVTVDQYYGGRV EINAFAVADSAIAGRSGEALVLLRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGASG QLASKLGMAPWQVDRARRDLQLWDDAGLGRAVEALAEADAQVKGGGRDPVYSLERMVR TVASRGRD" misc_feature complement(1848938..1849849) /locus_tag="CMS_1756" /old_locus_tag="CMS1756" /inference="protein motif:HMMPfam:PF06144" /note="HMMPfam hit to PF06144, DNA polymerase III, delta,score 2.4e-06" gene complement(1850044..1851801) /locus_tag="CMS_1757" /old_locus_tag="CMS1757" /pseudo /db_xref="GeneID:6157512" misc_feature complement(1850044..1850844) /locus_tag="CMS_1757" /old_locus_tag="CMS1757" /inference="protein motif:HMMPfam:PF03772" /note="HMMPfam hit to PF03772, ComEC/Rec2-related protein,score 1.4e-41" /pseudo gene complement(1851801..1852868) /locus_tag="CMS_1758" /old_locus_tag="CMS1758" /db_xref="GeneID:6157513" CDS complement(1851801..1852868) /locus_tag="CMS_1758" /old_locus_tag="CMS1758" /codon_start=1 /transl_table=11 /product="putative DNA-binding/transport protein" /protein_id="YP_001710464.1" /db_xref="GI:170782131" /db_xref="GeneID:6157513" /translation="MKSRAVRRRAALAPSQGGSVTAIPRTGRGARASPRAAYRARMRP LRRPRPGPDAPERPGWADDGWEPDAAWPSDDARPSPPPRDDEEADGGIAAPPAPDGAH PPPGQRVRVRLRVGIGAAVVLVGAALVVTILVTAVQSASQASPTAPAVAHPSSATHAS SDAGAASDSADGDASGDSGAGDPGAAGDATGETGGTGGSADGARTPIYVHVVGAVVSP GLYPLAPGSRVVDALTAAHGFADGADTAGVNLARVLSDGEQLVVPRQGEASAAPAPSG AAGAGGAAGGGTATPSAPVDLNTATAEQLETLPRVGPSLAARVIAWRSAHGRFARVAD LGRVPGIGDRTLASLTPLVRV" sig_peptide complement(1851801..1851866) /locus_tag="CMS_1758" /old_locus_tag="CMS1758" /note="Signal peptide predicted for CMS1758 by SignalP 2.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.585 between residues 22 and 23" misc_feature complement(1852458..1852526) /locus_tag="CMS_1758" /old_locus_tag="CMS1758" /note="1 probable transmembrane helix predicted for CMS1758 by TMHMM2.0 at aa 115-137" misc_feature 1852999..1854385 /note="submitted with no further information" gene complement(1853039..1854088) /locus_tag="CMS_1759" /old_locus_tag="CMS1759" /db_xref="GeneID:6157514" CDS complement(1853039..1854088) /locus_tag="CMS_1759" /old_locus_tag="CMS1759" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710465.1" /db_xref="GI:170782132" /db_xref="GeneID:6157514" /translation="MTTTTPVIQPQEFTKDMFEGEQIKNLNDFLTLVKKGKPWIMPTK RLIHLNGNARRGAVVNKQINDRLKSNGLICEPEIENADYYGDVVIYDPRDKIPQPKTV TALPVSAFVGEYDGLISCGLEMPAVKVQTLMIMKDISQVPVLSNDKKNMHGVITWQSI AQYRGDLNLAKAADIQGPRSHVASSSDDFLDHVISIIDKEFLFYRAPDGRVDGIITAS DLAQAFHSSAGIYIQLQEIETRLRILLDKSPIPRLQGRLTPNRRNATDFRGAIDMSFG EYIHALQDADVWKAAGISLDQKVCLDLLTEVKNVRNGVMHFSAGAGEVLDSEAPDSAC IASALRSLRATPLKG" gene complement(1854448..1857006) /gene="leuS" /locus_tag="CMS_1760" /old_locus_tag="CMS1760" /db_xref="GeneID:6157515" CDS complement(1854448..1857006) /gene="leuS" /locus_tag="CMS_1760" /old_locus_tag="CMS1760" /EC_number="6.1.1.4" /note="leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="YP_001710466.1" /db_xref="GI:170782133" /db_xref="GeneID:6157515" /translation="MAHETPDTPGETYDFRAIEAEWSEVWEREQPFRTPDASDSRPRK YILDMFPYPSGDLHMGHAEAFALGDAVARYWRQQGFNVLHPIGWDSFGLPAENAAIKR GVDPREWTYANIETQKQSMKRYGLSFDWERELHTSDPEYYRWNQWLFLKMHEKGLAYR KDSWVNWDPVDQTVLANEQVLPDGTSDRSGAVVVKKKLTQWYLRITDYADRLVDDLNQ LEGTWPAKVLSMQRNWIGRSIGAEVDFVVEGRDEPVTVFTTRPDTLHGATFMVVAPDS DLAAELVEGASEEVRESFRGYLERTQRLNEIERSTTDRPKTGIPLGLTAINPVNGERI PVWAADYVLADYGTGAVMAVPAHDQRDLDFARAFDLPVRVVVDTTQPVTGAIRIIPED GELPDLEEVLPGRTGVALPGEGRLINSGSLNGLSKQPAIKRVIEQLEAEGRGRAAKNY RLRDWLISRQRFWGTPIPIVYDAEGSEIRVPEDQLPVRLPDTEGLDLTPKGKSPLAAA TAWSNVPSPVDGSPATRDPDTMDTFMDSSWYWLRFLSPNDATKAFDPADADRWAPIDQ YVGGVEHAILHLLYSRFITKVLFDLGYVTFTEPFSALLNQGMVLSGGSKMSKSKGGVD LGSEMDRHGVDAIRLTMAFAGPPEDDIDWEDVSPSGSAKFLARAWRLTGDITSAPEVE WKTGDEALRRVTHRFLAEAPGMLEAFKFNVVIARTMELVNAIRKTIDQGPGGGDAAVR EATEVVAVALSLFAPYTAEDMWKRLGREGSVAFAGWRKADRNLLVQTTVTAVVQVDGK VRDKLEVDAKIGADELEALARETAGVRRSTAGRTIDKVIVRAPKIVSITTTPAP" misc_feature complement(1855045..1856946) /gene="leuS" /locus_tag="CMS_1760" /old_locus_tag="CMS1760" /inference="protein motif:HMMPfam:PF00133" /note="HMMPfam hit to PF00133, Aminoacyl-tRNA synthetase,class Ia, score 7.6e-119" misc_feature complement(1856821..1856856) /gene="leuS" /locus_tag="CMS_1760" /old_locus_tag="CMS1760" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene complement(1857105..1858574) /gene="trpE" /locus_tag="CMS_1761" /old_locus_tag="CMS1761" /db_xref="GeneID:6158788" CDS complement(1857105..1858574) /gene="trpE" /locus_tag="CMS_1761" /old_locus_tag="CMS1761" /EC_number="4.1.3.27" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /protein_id="YP_001710467.1" /db_xref="GI:170782134" /db_xref="GeneID:6158788" /translation="MHEGEARAARPVIGRRLAGWHDPESVFLALFAAESAGDVAWLDD SAGEGWSYLAVSAGTVAEWPHGVFAGLAELLPASAATPSAPSEVDVEVDALPDGLAFR LGLVGWIPHDAWSETVPLHHAPPSAPEVDASVPAAAIRVDRLLAFDHAAGEVWAVARA GDAWPLAVEEEMARVTSSGARAPAAHAGDDVPASPVWRHDDAAYLDLIRSCQESIRRG DAYQLCLTNSASVPGRVDPVRVHLALRTLSPTHHGAFLRVGSTALVSASPERFVEVDA RGTLRTMPIKGTRPRHADPAADVRARAELLASDKERAENVMIVDLMRNDLSRVCVLGS VRVTSLFAVEAYAQVHQLVSRVEGELAPGVSALDAVRALFPAGSMTGAPKSAAVGILR ALEGGPRGVYAGAFGWFGDDGRVDLAMVIRSVVVTDGRATVGAGGGITALSVPEEELD EVRVKAAPLLAALRAGHVPSLRDHVESPGPPLPRAPHPA" misc_feature complement(1857186..1857977) /gene="trpE" /locus_tag="CMS_1761" /old_locus_tag="CMS1761" /inference="protein motif:HMMPfam:PF00425" /note="HMMPfam hit to PF00425, Anthranilate synthase component I and chorismate binding protein, score 4.4e-104" gene 1858733..1859446 /locus_tag="CMS_1762" /old_locus_tag="CMS1762" /db_xref="GeneID:6159075" CDS 1858733..1859446 /locus_tag="CMS_1762" /old_locus_tag="CMS1762" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710468.1" /db_xref="GI:170782135" /db_xref="GeneID:6159075" /translation="MLAADSFLVEEGRVLALDVHRQRFLASLRLQSAAVPDPAAFLDA AVRVLPRDGAWFPRVEALRGPDGDVARLLIRPAPERTALVVLRDHDGPDPRTMPRVKG PDLHALGALRSRAARFGAGEAVILADDGTIVEGAYSAILWWHGDALAVVEGDVPRIPS VTERSIVALATALGIDVLHERARPSDLDGREVWAVSALHGIRLVRGWIDGPATAAEPG RVRAWRTRLDALRRELPAG" gene complement(1859478..1861148) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /db_xref="GeneID:6157516" CDS complement(1859478..1861148) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710469.1" /db_xref="GI:170782136" /db_xref="GeneID:6157516" /translation="MNRDDVLRLAQPPARRALPGLLAGLASAVAAVALLATSAWLITR ASEQPPILFLGMAIVGVRAFALGRAAFRYLERITSHDAAFRALATLRVGVFERLLPFA PAGLRDTRRGDLLTRLVGDVDRLQDLPLRVVQPLAVSVLVQAASVAVVWAVLPAAGIA LLVALAVALVVGVGATTALAGRTETRIAPLRALLQDLVLDLVGGLDVLTAFGAVDDRL AAIDRAAADLRRAELRSASAAGITTGVVLAGTGVVAGWTVLQGVPGLASGALDPAWLA LAALVPLALVEQATAVPLAVQAWRRVRTSAARVAGVVPESVPDEIPREPVRADADPVP VAAPARGTTLEVRDLVTRWPGAGQDALAPVSLVVRPGETVVVRGPSGSGKSSLAAALA RFLESRGAYELEGRDARSMPPSAVRRIVGLCEQAPHLFDASIRQNLLFARDGATDDEL VGVLARVGLAGWAADRGGLDARVGDRGGLVSGGQAQRIDLARALLADFPVLVLDEPTA DVDAEQARAVLRDVLVAARDHGRGVLLLTHTEVPDDLVDRTVQLRVAE" sig_peptide complement(1859478..1859618) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /note="Signal peptide predicted for CMS1763 by SignalP 2.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.560 between residues 47 and 48" misc_feature complement(1859490..1860038) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.1e-33" misc_feature complement(1859667..1859711) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /note="PS00211 ABC transporters family signature." misc_feature complement(1859994..1860017) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(order(1860261..1860329,1860372..1860440, 1860606..1860674,1860687..1860755,1860936..1860995, 1861023..1861091)) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /note="6 probable transmembrane helices predicted for CMS1763 by TMHMM2.0 at aa 20-42, 52-71, 132-154, 159-181,237-259 and 274-296" misc_feature complement(1860282..1861091) /locus_tag="CMS_1763" /old_locus_tag="CMS1763" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 0.00089" gene complement(1861145..1862890) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /db_xref="GeneID:6157517" CDS complement(1861145..1862890) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710470.1" /db_xref="GI:170782137" /db_xref="GeneID:6157517" /translation="MKPLDPRLLRHSASARAMLALGAVVGVVQTLALVAFCWSLTQLV VRAIGGADADALAPELALVIGSAVVRGASAWLLDVVGARGAARVTAELRRRALRAIAD LGPAWTAARSRGRLATVVGPGLDALDPYFARYVPQLILTALATPIVVAVLFASDPLTG VTVLVTLPVIPVFMVLVGWATQDVQRRQWSRLTELASGFLDVVDGLSTLLVFGRARRQ TARIRRVTEEYRVETMRVLRISFLSGFVLELAASLSVALVAVSVGVRLIGGQLDLGVG LFVLLLAPEAFLPIRQVGVQFHAAAEGVAASDDVLGILEEDRAARASRPVPGGEAATA PAGDALVIRDLAVSRDGRPVLAGIQATFPRGRVTAVTGPSGVGKSSLLAAIRGQLPAE GTIGWSGGAEASAPRPPVPTEIAWAGQRPGLVAGTVRENVALGVADPDDALVRRALAL AAAGGIDPDLVLGVGGQGLSGGQAQRVAVARAAHRAMALDCPLVLLDEPSSALDAATE ERLAAGIRALADQGRAVVVVTHRGALVRAADAELPLGGGSDADAAPQVPDSRAVAAPP ARIAPEPAWRAQVAP" sig_peptide complement(1861205..1861285) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /note="Signal peptide predicted for CMS1764 by SignalP 2.0 HMM (Signal peptide probability 0.620) with cleavage site probability 0.312 between residues 27 and 28" misc_feature complement(1861250..1861798) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1e-40" misc_feature complement(1861442..1861486) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /note="PS00211 ABC transporters family signature." misc_feature complement(1861754..1861777) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1862021..1862830) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 1.1e-09" misc_feature complement(order(1862108..1862176,1862351..1862419, 1862432..1862491,1862660..1862728,1862756..1862824)) /locus_tag="CMS_1764" /old_locus_tag="CMS1764" /note="5 probable transmembrane helices predicted for CMS1764 by TMHMM2.0 at aa 3-25, 35-57, 114-133, 138-160 and 219-241" gene complement(1862912..1863875) /locus_tag="CMS_1765" /old_locus_tag="CMS1765" /db_xref="GeneID:6157518" CDS complement(join(1862912..1863862,1863864..1863875)) /locus_tag="CMS_1765" /old_locus_tag="CMS1765" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710471.1" /db_xref="GI:170782138" /db_xref="GeneID:6157518" /translation="MSHRNARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1862924..1863466) /locus_tag="CMS_1765" /old_locus_tag="CMS1765" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-38" misc_feature complement(1863737..1863802) /locus_tag="CMS_1765" /old_locus_tag="CMS1765" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 45-66, sequence RPVSHVARELGVSRQCAHRWVA" gene complement(1863973..1864977) /gene="cydB" /locus_tag="CMS_1766" /old_locus_tag="CMS1766" /db_xref="GeneID:6157519" CDS complement(1863973..1864977) /gene="cydB" /locus_tag="CMS_1766" /old_locus_tag="CMS1766" /EC_number="1.10.3.-" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit II" /protein_id="YP_001710472.1" /db_xref="GI:170782139" /db_xref="GeneID:6157519" /translation="MDLTLIWFGVIAFLFVGYFVLDGFDFGVGMSLPFLAKDDTDRRV LINTIGPVWDLNETWLIVAGAALFAAFPEWYATMFSGFYLLLLAILITLILRGVSFEF RHQGASDRWRGWFDAMIVTGSVVPSFLWGVVFANVVRGVPMDANHDYTGSTLDLLNPY ALLGGLTTLSLFLVNGLQFAALKTDGPIRARARLLSMRVGAVTIVIAAAFLVWTTLAH GSALSGLVSALAAVALVGSYLANVRGRERWAFGLLAATIALAVASLFTALHPYVMPAS NDPANGLTLENASSSPYTLTIMTWAAGFALPLILAYQAWTYWVFRKRITRAVIAQAAH" misc_feature complement(1864003..1864977) /gene="cydB" /locus_tag="CMS_1766" /old_locus_tag="CMS1766" /inference="protein motif:HMMPfam:PF02322" /note="HMMPfam hit to PF02322, Cytochrome bd ubiquinol oxidase, subunit II, score 2.1e-143" misc_feature complement(order(1864021..1864089,1864165..1864233, 1864252..1864320,1864330..1864398,1864432..1864500, 1864573..1864641,1864678..1864746,1864906..1864965)) /gene="cydB" /locus_tag="CMS_1766" /old_locus_tag="CMS1766" /note="8 probable transmembrane helices predicted for CMS1766 by TMHMM2.0 at aa 5-24, 78-100, 113-135, 160-182,194-216, 220-242, 249-271 and 297-319" gene complement(1864977..1866389) /gene="cydA" /locus_tag="CMS_1767" /old_locus_tag="CMS1767" /db_xref="GeneID:6158647" CDS complement(1864977..1866389) /gene="cydA" /locus_tag="CMS_1767" /old_locus_tag="CMS1767" /EC_number="1.10.3.-" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit I" /protein_id="YP_001710473.1" /db_xref="GI:170782140" /db_xref="GeneID:6158647" /translation="MNDLLDPLLLSRWQFGLTTVYHFLFVPLTIGMAFVCALYQTAWV RTGKQHYLRLTRFFGRIFLINFAMGTVTGIVQEFQFGMNWSEYSRFVGDVFGAPLALE GLLAFFLEASFIGVWIFGWDKLPKKLHLASIWVVSVASILSAYFILSANAFMQNPVGY RIDEARGRAELTDIWALLTNKVALAAFPHTIFAAFMCAAAVIISVAAWHLSRNQHLET MMPAMRFGMWFMVVSGALTILSGDSLGLAMVQTQPMKMAAAEAHYDTSSGAAASFSLF TWGTPDGSSELFSIRIPYLLSFLSTHTLDGTVQGINDLQAQYVASYGPGDYTPTIWVT YWAFRWMMGFGMAAIAVAVGGLWFTRGGRRITKPWMWRVAIWAAPLPLLAMTVGWIFT EMGRQPWIVFSLLQTSSAVSPNVTGLQVLISLVAFTVVYGSLAVVEFRLILKAAQKGP EAEQEPDPVTGEVVREASVY" misc_feature complement(1865010..1866362) /gene="cydA" /locus_tag="CMS_1767" /old_locus_tag="CMS1767" /inference="protein motif:HMMPfam:PF01654" /note="HMMPfam hit to PF01654, Cytochrome bd ubiquinol oxidase, subunit I, score 2.8e-178" misc_feature complement(order(1865079..1865147,1865214..1865282, 1865316..1865384,1865649..1865717,1865754..1865822, 1865940..1866008,1866027..1866095,1866153..1866221, 1866279..1866347)) /gene="cydA" /locus_tag="CMS_1767" /old_locus_tag="CMS1767" /note="9 probable transmembrane helices predicted for CMS1767 by TMHMM2.0 at aa 15-37, 57-79, 99-121, 128-150,190-212, 225-247, 336-358, 370-392 and 415-437" gene 1866769..1867209 /locus_tag="CMS_1768" /old_locus_tag="CMS1768" /db_xref="GeneID:6158646" CDS 1866769..1867209 /locus_tag="CMS_1768" /old_locus_tag="CMS1768" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710474.1" /db_xref="GI:170782141" /db_xref="GeneID:6158646" /translation="MTSPAPASPASDRTRGSATSAAGAPASAFVALLVADGAHLTGRV AETADRLESGAPAERYDARSASVEDALVVALALVAGGLDVRDAAQHAVDGDPAPVIQA LHSLAGRGGVEPYLLRNGLTVDQFHALRDAVVAGGGRELDESQD" gene complement(1867514..1868098) /locus_tag="CMS_1769" /old_locus_tag="CMS1769" /db_xref="GeneID:6157520" CDS complement(1867514..1868098) /locus_tag="CMS_1769" /old_locus_tag="CMS1769" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710475.1" /db_xref="GI:170782142" /db_xref="GeneID:6157520" /translation="MILPQGATRPLRYPAGMRIRPAEPRDIDDLLEIRNHAILTGTAL WTEEPVDRAEREAWFRETTEAGDPILVAEVDGAFAGYGTYGPWRRMSGYRFSVEDSVY VRDGFQGRGIGRALVEAVVAHARAAGKRAVFADIEAGNTGSIRLHERLGFRQVGLLPG IGWKFGRPLDLAILHLPLVEDDASAEEPPGGRAG" misc_feature complement(1867640..1867891) /locus_tag="CMS_1769" /old_locus_tag="CMS1769" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.2e-21" gene 1868102..1868572 /locus_tag="CMS_1770" /old_locus_tag="CMS1770" /db_xref="GeneID:6157521" CDS 1868102..1868572 /locus_tag="CMS_1770" /old_locus_tag="CMS1770" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710476.1" /db_xref="GI:170782143" /db_xref="GeneID:6157521" /translation="MDCTFSRVDWDDIDATSLRAAQRAELDLRYGGDLEPGTKPTAAD MAAFLVARDAAGAPVGCGGIRMLGDRGDGTPWAELKRMYVVPAARGTGVATALLRTLE ETARELGVVDLVLETGPEQPDAMRFYVREGWTEIPRFGAYADSEGSRCYALTLA" misc_feature 1868249..1868503 /locus_tag="CMS_1770" /old_locus_tag="CMS1770" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 9.7e-19" gene 1868569..1869414 /locus_tag="CMS_1771" /old_locus_tag="CMS1771" /db_xref="GeneID:6157522" CDS 1868569..1869414 /locus_tag="CMS_1771" /old_locus_tag="CMS1771" /codon_start=1 /transl_table=11 /product="putative integral membrane transferase" /protein_id="YP_001710477.1" /db_xref="GI:170782144" /db_xref="GeneID:6157522" /translation="MIRRLRLLALSSHPGPTATVTVLAGGLAVALGYGPGRVAAVALA VLLGQLSIGLSNDWIDAERDRSVARADKPVARGEVAVGHVRAAALATAAACFVSSAAL GPAFLLAHAVLVGAGWAYNAGLKRTAVSVVPFVVAFGILPTVVALGAADPVPAAAWAM ATGAVLGVSIHFTNVLPDLEDDARTGVRGLPHRLGRVPSGLVAFGALALGAVVVAVGP VLADPAHAVTPLAVAGLVVTLGIAAWGAVRVVTRPPGRLLFQLIMAASLLLVAQIALN ATRLT" sig_peptide 1868569..1868688 /locus_tag="CMS_1771" /old_locus_tag="CMS1771" /note="Signal peptide predicted for CMS1771 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.844 between residues 40 and 41" misc_feature order(1868587..1868655,1868863..1868931,1868950..1869018, 1869028..1869096,1869157..1869225,1869253..1869321, 1869340..1869393) /locus_tag="CMS_1771" /old_locus_tag="CMS1771" /note="7 probable transmembrane helices predicted for CMS1771 by TMHMM2.0 at aa 7-29, 99-121, 128-150, 154-176,197-219, 229-251 and 258-275" misc_feature 1868614..1869405 /locus_tag="CMS_1771" /old_locus_tag="CMS1771" /inference="protein motif:HMMPfam:PF01040" /note="HMMPfam hit to PF01040, UbiA prenyltransferase,score 1.6e-06" gene complement(1869407..1870597) /locus_tag="CMS_1772" /old_locus_tag="CMS1772" /db_xref="GeneID:6157523" CDS complement(1869407..1870597) /locus_tag="CMS_1772" /old_locus_tag="CMS1772" /codon_start=1 /transl_table=11 /product="putative oxygenase" /protein_id="YP_001710478.1" /db_xref="GI:170782145" /db_xref="GeneID:6157523" /translation="MTRVDALIVGGGPVGIHLAALLAQAGLDVRVWEARPMPARLSRA IGIHAPSLDAFDRLGVAEEMVAEAVLVRRGIAMGPRGELGRVSFARVSTTHPYVAALP QWRTEAILARRLTGLAPGALHRGVTLTGLDADPVGLPDGVVRATGRDADGATVEVTAS LVIGADGTRGAVRGLLGIGVDERPLPDRFLMGDAPDRTDAGDDAVVTLHPDGVVESFP LPGGMRRFVVGLREGERDGDPATVLARAVGERTGHVVSTAELDPVSGFGVRRRLAHRM VARRAVLIGDAAHEISPIGGQGMNLGWLDADALAPILVDAVRTRRGVPDAVRLARWER DRLASARRAAVQSEINTALGRPVRGLTRLVRDAGLRAVLASPAAAGLASVYAMGRDAG ARVR" misc_feature complement(1869554..1870126) /locus_tag="CMS_1772" /old_locus_tag="CMS1772" /inference="protein motif:HMMPfam:PF01360" /note="HMMPfam hit to PF01360, Flavoprotein monooxygenase,score 8.3e-22" misc_feature complement(1870175..1870582) /locus_tag="CMS_1772" /old_locus_tag="CMS1772" /inference="protein motif:HMMPfam:PF01494" /note="HMMPfam hit to PF01494, Monooxygenase, FAD-binding,score 7.8e-12" gene complement(1870597..1871316) /locus_tag="CMS_1772A" /old_locus_tag="CMS1772A" /db_xref="GeneID:6157524" CDS complement(1870597..1871316) /locus_tag="CMS_1772A" /old_locus_tag="CMS1772A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710479.1" /db_xref="GI:170782146" /db_xref="GeneID:6157524" /translation="MDLSRRDARLAELMDDPDCDPAALDRTYARFQVVNRVVAGWRGV YRSRIRPLLSADRGTTLLDIGSGGGDVPLALARWARRDGLRLRVTGIDPDPRATAFAG ARPRDPDVAFRPASSAELVAEGRRFDLVTSNHVLHHLDDAAFDALLADSAALAPRAIH SDIARGRLAYALYGPASRLVARGSFVHVDGLRSIRRSWTPVELALRVPAGWRVEGAAP FRVLVVRDPSASRADAVERSG" gene complement(1871316..1872503) /locus_tag="CMS_1773" /old_locus_tag="CMS1773" /db_xref="GeneID:6157525" CDS complement(1871316..1872503) /locus_tag="CMS_1773" /old_locus_tag="CMS1773" /EC_number="2.3.1.74" /codon_start=1 /transl_table=11 /product="putative chalcone synthase" /protein_id="YP_001710480.1" /db_xref="GI:170782147" /db_xref="GeneID:6157525" /translation="MPPTVLAQDGVRDLFGSQPELGRLGTRLVSAAFNASGIRTRHTV IRELGTAPGMAGADAPVDDADGGPVFYDRASGRILTPGTGARNDTYIREAPALLLGAA RQAVEEAAGIEASDVTHVVTVSCTGFYAPGPDYAVVRGLWLGASTQRFHLGFMGCYGA FPALRMASQFCAADPDAVVLVVCVELCSLHLHSSDDADTIVASSVFGDGAAAAIVTAR PAPAGSTALDLDAFETVLTPVGEDDMAWTIGDQGFDMILSSYVPKIIDEHITGALEPL WAQVPALAGVAPAEIEDWAIHPGGRSILDRVEDRLVLAPAQLEASRSTLAEVGNMSSA TVLFVLRRILHQTPPADVPGRPDVAEPAPIPASGPGAGRVCAMAFGPGLTVETALMTR RTA" misc_feature complement(1871322..1871822) /locus_tag="CMS_1773" /old_locus_tag="CMS1773" /inference="protein motif:HMMPfam:PF02797" /note="HMMPfam hit to PF02797, Naringenin-chalcone synthase, score 1.1e-20" misc_feature complement(1871847..1872398) /locus_tag="CMS_1773" /old_locus_tag="CMS1773" /inference="protein motif:HMMPfam:PF00195" /note="HMMPfam hit to PF00195, Naringenin-chalcone synthase, score 2.1e-08" gene complement(1872533..1873051) /locus_tag="CMS_1774" /old_locus_tag="CMS1774" /db_xref="GeneID:6157526" CDS complement(1872533..1873051) /locus_tag="CMS_1774" /old_locus_tag="CMS1774" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710481.1" /db_xref="GI:170782148" /db_xref="GeneID:6157526" /translation="MPARGPTEQNGSTRTIDERRSPRMAKKKSPSGEVSVLGAVTTVA REVRKHKTVAESAPEGQGAHIPPAPKRSPEELKRDIQTGRDELARTVRELETALDVAA RASELKADASARARAIRDDVTSHVRTTAHDVSRRTRAFTRKDPAVAASIGAGAVAVVL AVGAAVVSGGRR" misc_feature complement(1872551..1872619) /locus_tag="CMS_1774" /old_locus_tag="CMS1774" /note="1 probable transmembrane helix predicted for CMS1774 by TMHMM2.0 at aa 145-167" gene complement(1873126..1874052) /locus_tag="CMS_1774A" /old_locus_tag="CMS1774A" /db_xref="GeneID:6157527" CDS complement(1873126..1874052) /locus_tag="CMS_1774A" /old_locus_tag="CMS1774A" /codon_start=1 /transl_table=11 /product="putative secreted substrate-binding transport protein" /protein_id="YP_001710482.1" /db_xref="GI:170782149" /db_xref="GeneID:6157527" /translation="MTHSITRRLLVGTVALGTAMALAGCSSGDPLDTSGGSASAAPTD TISVGSAAFGENVILAEVYAQALEANDVKVTRNLQIGEREVYLKALEEGSIDLIPEYT GNLLAAYDDESTATSSDDVYAALGAALPDGFEVLDESPAEDKDSYNVTKEYSAANGVT SLSDLKDKTVRVGGGAVLGEREYGIPGLTGTYGIDASLVTIEDQGGPNTVKALLDGQV DMANIYSTTPSILDNGFVTLEDPENLIKAQNVVPLVKTAKMNPDVTAILDKVSAALTT EDLTKMNRRNQGDEKAEPAAIAADWLKEKALF" gene complement(1874067..1874792) /locus_tag="CMS_1774B" /old_locus_tag="CMS1774B" /db_xref="GeneID:6157528" CDS complement(1874067..1874792) /locus_tag="CMS_1774B" /old_locus_tag="CMS1774B" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710483.1" /db_xref="GI:170782150" /db_xref="GeneID:6157528" /translation="MNLFAEALALLLDASRWAGPTGYGTRLLEHVGYTALSMGVAAII AVPAGLYIGHTGRGRNVAVAFSDGLRALPTLGVLVLLGLLFGIGLTGPILTFSLLGIP PLLAGVYSGVQAVDRSAIDAARAVGMTETQILGRVEIPLALPLMISGFRAATLQVIST VTLGAYLGLGGLGRDIFTGLTTRNFPLLLASAILVTALALVVDAVFAIVQRAVVPRGV VAAAGRTPDSPRTSSRPAVSTTP" gene complement(1874789..1875487) /locus_tag="CMS_1775" /old_locus_tag="CMS1775" /db_xref="GeneID:6157529" CDS complement(1874789..1875487) /locus_tag="CMS_1775" /old_locus_tag="CMS1775" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710484.1" /db_xref="GI:170782151" /db_xref="GeneID:6157529" /translation="MNWVLANIGTVLDLAVAHVALAAPPVLLGLVISLPLGWLANRYR RTRGALLTVGGALYTIPSIALLLAMPAIIGTNILDPRNVVVALTVYAVALMIRITSDA LASVSEDVKQSATAMGYAGWARFWRVELPLAGPVLLAGLRVVSVSTVSMVTVGSLSGI LSLGTMILSGYRRQFYTEIITGIVGIVVIALVFDLILLLAGRLLMPWSTQPSLRARSR SARRAALVTDASAS" misc_feature complement(1874858..1875445) /locus_tag="CMS_1775" /old_locus_tag="CMS1775" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 8.6e-16" misc_feature complement(order(1874873..1874941,1874975..1875043, 1875056..1875115,1875176..1875244,1875272..1875340, 1875377..1875445)) /locus_tag="CMS_1775" /old_locus_tag="CMS1775" /note="6 probable transmembrane helices predicted for CMS1775 by TMHMM2.0 at aa 15-37, 50-72, 82-104, 125-144,149-171 and 183-205" misc_feature complement(1875095..1875181) /locus_tag="CMS_1775" /old_locus_tag="CMS1775" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(1875484..1876389) /locus_tag="CMS_1776" /old_locus_tag="CMS1776" /db_xref="GeneID:6157530" CDS complement(1875484..1876389) /locus_tag="CMS_1776" /old_locus_tag="CMS1776" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710485.1" /db_xref="GI:170782152" /db_xref="GeneID:6157530" /translation="MIEFHHVRKQYPDGTLAIEDFSLVVPSQTTTVLVGSSGCGKTTL MRMINRMVEPTSGRIEIDGTDIASQDAVKLRRSIGYVMQNSGLLPHRKVVDNIATVPR LTGVDKRTAREGALKLMDTVGLDRSMADRYPSQLSGGQQQRVGVARGLAVDPNILLMD EPFGAVDPLVRDDLQQELIRLRTQLDKTVVFVTHDIDEAFLLGDQVVILEKGGRIAQQ GTPQEILSNPANDFVRDFVGADKGKRALHVEDTGTGQVLVDRDGRLVGVLDDEGRSAA RSASAPTEAGAAHAPGAQAQGAGPA" misc_feature complement(1875754..1876308) /locus_tag="CMS_1776" /old_locus_tag="CMS1776" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.8e-60" misc_feature complement(1875940..1875984) /locus_tag="CMS_1776" /old_locus_tag="CMS1776" /note="PS00211 ABC transporters family signature." misc_feature complement(1876264..1876287) /locus_tag="CMS_1776" /old_locus_tag="CMS1776" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 1876573..1877313 /locus_tag="CMS_1777" /old_locus_tag="CMS1777" /db_xref="GeneID:6157531" CDS 1876573..1877313 /locus_tag="CMS_1777" /old_locus_tag="CMS1777" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710486.1" /db_xref="GI:170782153" /db_xref="GeneID:6157531" /translation="MEGMTRILARATTADDLVGLLDVDHAGDAVPGPSWRIVPGQRVA VLVDTLPRRAEGDTEDQVPVRRLESARWGLVPAGSSGPDQGPPVAEIPAEQLASRPEL LQALVSRRAAIPVSGYYEHHETDDGLRTPYLVGAGDGTVLLAALYEWWRDPSRASDDP ARWVLSCAVVTRPSAGTVEALAERMPVVLSPDVVEEWLDPTAEGSPELLRAVATQAED VIEELAMDEVGPGIDQGAPDSAELARPV" misc_feature 1876573..1877226 /locus_tag="CMS_1777" /old_locus_tag="CMS1777" /inference="protein motif:HMMPfam:PF02586" /note="HMMPfam hit to PF02586, Protein of unknown function DUF159, score 4.5e-17" gene 1877422..1878450 /locus_tag="CMS_1778" /old_locus_tag="CMS1778" /db_xref="GeneID:6157532" CDS 1877422..1878450 /locus_tag="CMS_1778" /old_locus_tag="CMS1778" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710487.1" /db_xref="GI:170782154" /db_xref="GeneID:6157532" /translation="MLHRAARIEDRIHEIREGRARKRGLKPTVIPYAGYGSVRWVRVL CRVLLTDTKSKRALAGDKVVRGWRSFTSVPLTDVDVVVEIDGTEHHVRADRGGVVDQV VEASLPSGWHTIRIRSEGSETVDAPVFIVGDDVRTGILSDIDDTVMVTALPRPFLAAW NTFVLDEHARTPTPGMAVLYERLRLQHEGAPVLYLSTGAWNVAPTLTRFLSRNLYPPG PILLTDWGPTVDRWFRSGMEHKRNNLQRLAAEFPHVKWILAGDDGQHDELLYGEFAER HPGNVEVVLIRQLSAGEAVLAGGRAKAEKRALDSSIPWVYAPDGASLLAQLDDLGLAD DSGTRIGT" gene complement(1878521..1879387) /locus_tag="CMS_1779" /old_locus_tag="CMS1779" /db_xref="GeneID:6157533" CDS complement(1878521..1879387) /locus_tag="CMS_1779" /old_locus_tag="CMS1779" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710488.1" /db_xref="GI:170782155" /db_xref="GeneID:6157533" /translation="MTDTTRAAGASGTFTIGGDLPVVRLGYGTMQLTGEGVWGAPEDP QEAVRVIRRAAELGVTFFDTADSYGPFVAEELLKEALHPYADDVVIATKGGLTRPGPG DWQPVGRPEYLRQQAELSLRHLGLERIDLYQLHRIDPAVPLADQIGVLKDLQSEGKIR HIGLSEVQVDDVKAAREIAEIVSVQNLFNLAKRDAEPLLDYAEAEGLAFMPWFPLATG ELAKDGGPLDALAKQHDARASQLALAWLLRRSPVMLPIPGTKSVGHVEDNIAAAGIEL TDDEFQALTDAV" misc_feature complement(1878524..1879321) /locus_tag="CMS_1779" /old_locus_tag="CMS1779" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 2e-43" gene 1879642..1879965 /locus_tag="CMS_1780" /old_locus_tag="CMS1780" /db_xref="GeneID:6157534" CDS 1879642..1879965 /locus_tag="CMS_1780" /old_locus_tag="CMS1780" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710489.1" /db_xref="GI:170782156" /db_xref="GeneID:6157534" /translation="MRIDEDVEVELSGDGSPLRFTWRGVVYGVVSSPERWIARVDWWQ RTGRAPRGASAHLLELRMWRVEAVPLPTGARRVDGSFDLSVDARGRWSLVNASDEELD MRLFA" gene 1880147..1880845 /locus_tag="CMS_1781" /old_locus_tag="CMS1781" /db_xref="GeneID:6157535" CDS 1880147..1880845 /locus_tag="CMS_1781" /old_locus_tag="CMS1781" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710490.1" /db_xref="GI:170782157" /db_xref="GeneID:6157535" /translation="MAALEWLFDAQLRIGDQTILWREIVGNLFGLASALGGMRRKVWA WPVGIVGNVLLFTVFLGAVFGTPNPVNLLGQAGRQVMFIAVSVYGWHRWNQARHGGAP VVPQWASGRERVLLVVALVGGTAILTPVFRALGSYEPVWADAWIFVGSLLATYGMAKG WVEFWLIWVAVDLVGVPLLVSAGYYASAFMYVFYGAFTLTGFFVWMRARGTGAPAVET AFPDPRVVEAPADR" misc_feature 1880147..1880668 /locus_tag="CMS_1781" /old_locus_tag="CMS1781" /inference="protein motif:HMMPfam:PF04973" /note="HMMPfam hit to PF04973, Nicotinamide mononucleotide transporter PnuC, score 4.5e-06" misc_feature order(1880270..1880338,1880483..1880551,1880585..1880653, 1880696..1880764) /locus_tag="CMS_1781" /old_locus_tag="CMS1781" /note="4 probable transmembrane helices predicted for CMS1781 by TMHMM2.0 at aa 42-64, 113-135, 147-169 and 184-206" gene complement(1880895..1882220) /locus_tag="CMS_1782" /old_locus_tag="CMS1782" /db_xref="GeneID:6157536" CDS complement(1880895..1882220) /locus_tag="CMS_1782" /old_locus_tag="CMS1782" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001710491.1" /db_xref="GI:170782158" /db_xref="GeneID:6157536" /translation="MEDPGARARRSPPGDERSPMQHAPQRTRADRARVRGIARHGRLR TPSAGRTVMRGVGMVAAVALVSTVSVVGIAAWDLSRTVADNTVDISGGQAMPPSLGGI DGGANILIVGSDSRAGQGDGYGAAKDVGTATLNDVTMLLHISEDSSRATVISFPRDML VPILACEGPDGTKYAASSRAQLNESLSRGGFECTVRMVEGLTGLDIPYGGVVQFNGVV EMSNAVGGVEVCVANGIYDPKTDLSLDPGIHPLQGKEAVQFLRTRYGVGDGSDISRIG NQQVFLSALVRTIKSSDTLTNPAKLYGIARAVVDNMQLSTSLADLDTLVSIALTFKDI PLDDVTFLQYPGEVLANGRVQPDEAAAAQLVGLLASDADFTLTEGTTTDESGSVPADG ATPAPTTAPPADGTATGSPAPAATPTAEVLDPSITGQTAAQSTCSNGQG" misc_feature complement(1881348..1881821) /locus_tag="CMS_1782" /old_locus_tag="CMS1782" /inference="protein motif:HMMPfam:PF03816" /note="HMMPfam hit to PF03816, Cell envelope-related transcriptional attenuator, score 6.3e-44" misc_feature complement(1881993..1882061) /locus_tag="CMS_1782" /old_locus_tag="CMS1782" /note="1 probable transmembrane helix predicted for CMS1782 by TMHMM2.0 at aa 54-76" gene complement(1882271..1883035) /locus_tag="CMS_1783" /old_locus_tag="CMS1783" /db_xref="GeneID:6157537" CDS complement(1882271..1883035) /locus_tag="CMS_1783" /old_locus_tag="CMS1783" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710492.1" /db_xref="GI:170782159" /db_xref="GeneID:6157537" /translation="MPVTLTEIPLPAAGPGASPGLHGVLAVPDGEGPWPAVVVVHEAF GVTDVMRRQAERLAEAGFLALMPDLFSAGGARRCLVATFRTLAAGEGRAFVDVESARR LLLDRADCTGRVGVIGFCMGGGFALAAASRGFDASSVNYGMLPEGLDGVLDGACPVVA SYGGRDRQLAGSADRLEAALTEHGIAHDVREYPAAGHAFLNDAETGPRALRPVLRAVG MGPEPASAADAWSRIDTFFSEHLLDAHLRGGEGTGA" misc_feature complement(1882313..1882975) /locus_tag="CMS_1783" /old_locus_tag="CMS1783" /inference="protein motif:HMMPfam:PF01738" /note="HMMPfam hit to PF01738, Dienelactone hydrolase,score 9.6e-48" gene complement(1883134..1884501) /gene="zwf" /locus_tag="CMS_1784" /old_locus_tag="CMS1784" /db_xref="GeneID:6157538" CDS complement(1883134..1884501) /gene="zwf" /locus_tag="CMS_1784" /old_locus_tag="CMS1784" /EC_number="1.1.1.49" /note="catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="YP_001710493.1" /db_xref="GI:170782160" /db_xref="GeneID:6157538" /translation="MTSEPSTLVILGASGDLTERLLLPGLGSLVASDRGRRIQLIGTG RSARTPQEWTKTVKTAFDSVDATGRRAASIVSSTKYVQADPTDLDDLKRILEACEGAP ALYFALPPAISIAVCQQLEKLDLPEGTTLALEKPFGSNGRTAAQLNRQLLKLVPEDRI HRTDHFLGLSTVLNLVSLRFANRFFESVWSAKDIEKVEILYDETLALEGRAGYYDKSG ALVDMIQSHLLQVLAVFAMEPPASIDPDDLRSNIASVLRATEVWDNDPVAHSRRARYT GATVDGTRIPAYAKEEGVDPANETETLAEVTFGVANARWAGVPFRLRSGKALKEASKR IIVTFKPVAHLPRGLHGSARPDRLIIDLKPDGISLEVTMDGTGEPFTLTQATFRAEFA EPELTPYGEVLDGILAGDPRLSVRGDVAERCWRIVAPVMRAWKGDRVPMAEYRAGSVG PTAWR" misc_feature complement(1883143..1883979) /gene="zwf" /locus_tag="CMS_1784" /old_locus_tag="CMS1784" /inference="protein motif:HMMPfam:PF02781" /note="HMMPfam hit to PF02781, Glucose-6-phosphate dehydrogenase, score 4.9e-48" misc_feature complement(1883980..1884501) /gene="zwf" /locus_tag="CMS_1784" /old_locus_tag="CMS1784" /inference="protein motif:HMMPfam:PF00479" /note="HMMPfam hit to PF00479, Glucose-6-phosphate dehydrogenase, score 2e-14" gene 1884592..1888039 /locus_tag="CMS_1785" /old_locus_tag="CMS1785" /pseudo /db_xref="GeneID:6159106" misc_feature 1884625..1884822 /locus_tag="CMS_1785" /old_locus_tag="CMS1785" /inference="protein motif:HMMPfam:PF02231" /note="HMMPfam hit to PF02231, Phosphoesterase PHP,N-terminal, score 1.1e-07" /pseudo misc_feature 1884952..1885275 /locus_tag="CMS_1785" /old_locus_tag="CMS1785" /inference="protein motif:HMMPfam:PF02811" /note="HMMPfam hit to PF02811, PHP, C-terminal, score 0.041" /pseudo misc_feature 1885330..1886898 /locus_tag="CMS_1785" /old_locus_tag="CMS1785" /inference="protein motif:HMMPfam:PF07733" /note="HMMPfam hit to PF07733, Bacterial DNA polymerase III alpha subunit, score 4.4e-143" /pseudo misc_feature 1887697..1887933 /locus_tag="CMS_1785" /old_locus_tag="CMS1785" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 1.8e-07" /pseudo gene 1888095..1889138 /locus_tag="CMS_1786" /old_locus_tag="CMS1786" /db_xref="GeneID:6157539" CDS 1888095..1889138 /locus_tag="CMS_1786" /old_locus_tag="CMS1786" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710494.1" /db_xref="GI:170782161" /db_xref="GeneID:6157539" /translation="MRITTTVRTTTRIPFVQVVKTSVAAIIAWFVCIALLPAQLPIFA TIAALLVVQPSINQTFGKAVERSLGVITGVLLALGLGLALGTSSGVVLLAVVVAVLVG WVFRLTPGSSTQIPISAMLVLAIGQLSPVYAVDRIVETVIGAAIGVVVNIAIAPPVLH EASRRAVVGLAGDCAAALDRLAGALSEPVDREELDRMLTRARELRPRHTKAVAEVDKG LESLTLNPLRRRHRALLEADRELLATLTVLVNRVVGMTRAVHDRYDPSLAEEPVVRGI ATELTRAAHDVRLLAEHALPGGISDGADPHEQPALTAPLVVLQPSEEHWILIGSLLED IRRIRSEIIGGAE" sig_peptide 1888095..1888226 /locus_tag="CMS_1786" /old_locus_tag="CMS1786" /note="Signal peptide predicted for CMS1786 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.422 between residues 44 and 45" misc_feature order(1888155..1888223,1888281..1888349,1888362..1888415, 1888428..1888496,1888515..1888574) /locus_tag="CMS_1786" /old_locus_tag="CMS1786" /note="5 probable transmembrane helices predicted for CMS1786 by TMHMM2.0 at aa 21-43, 63-85, 90-107, 112-134 and 141-160" gene 1889135..1890067 /locus_tag="CMS_1787" /old_locus_tag="CMS1787" /db_xref="GeneID:6157540" CDS 1889135..1890067 /locus_tag="CMS_1787" /old_locus_tag="CMS1787" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710495.1" /db_xref="GI:170782162" /db_xref="GeneID:6157540" /translation="MTRPLPGYSPLELDPVPAASGLVRGTTPTRLGVVRHHHVPVRGS DTATVLLHGAAGSWTTWTPLIRTARDAGVPFAELVAIDLPGWGGSALDATDEEATVDA IADAVRAVVDGLGYAQWRLIGHSMGGFIALHLAAREPARAVSVALVSPTTYSVIASVA HPVRAFRLIPGFTMMLGVMRTMRRLGRPGTALIRGVGRVRLMRAVALPLFAHGWRVRR SIVDAIATEARPRAFSLAAEVTRGYDADGLWARIACPVVAVRGDDDVFVSRDDLDLLA RAVPTLRSAVIPDAGHFAHVERPAETLRALGLLA" misc_feature 1889360..1890058 /locus_tag="CMS_1787" /old_locus_tag="CMS1787" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1.1e-22" gene 1890208..1891230 /locus_tag="CMS_1788" /old_locus_tag="CMS1788" /db_xref="GeneID:6157541" CDS 1890208..1891230 /locus_tag="CMS_1788" /old_locus_tag="CMS1788" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710496.1" /db_xref="GI:170782163" /db_xref="GeneID:6157541" /translation="MRVPVPSSPRPLLRRAGRAAGDDAGRTARRSRGAADGYIPYELD PDPHDSGLVAGVTVTGLGMVRHHHAPGRRTRTATVLLHGAAGSWTTWTPALRAARDAG APLEDVVAVDLPGWGGSPIAVPDDELTADSVVESVMRVVDDLGYDGCRVVGHSMGGFL ALHLAVRQPVRVRSVALVSRTLYAVMRSATHPIRRFDVLPGFSTMLGSIHVTRLLGAP MLAFVRVLQRTGLLRQLTRPLFAHGGRVGGSVIAALADEVRPRGFLRATEIAVAYPAA ELWPRITCPVTAVQGGSDVFVAPDDLVRLDRDVPCASHAVIADAGHFAHVERPAETLR ALGLLP" misc_feature 1890523..1891221 /locus_tag="CMS_1788" /old_locus_tag="CMS1788" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 2e-21" gene complement(1891337..1891902) /locus_tag="CMS_1789" /old_locus_tag="CMS1789" /pseudo /db_xref="GeneID:6157542" misc_feature complement(1891351..1891869) /locus_tag="CMS_1789" /old_locus_tag="CMS1789" /inference="protein motif:HMMPfam:PF04264" /note="HMMPfam hit to PF04264, YceI, score 2.7e-70" /pseudo gene 1892057..1893034 /locus_tag="CMS_1790" /old_locus_tag="CMS1790" /db_xref="GeneID:6157543" CDS 1892057..1893034 /locus_tag="CMS_1790" /old_locus_tag="CMS1790" /codon_start=1 /transl_table=11 /product="putative alcohol dehydrogenase" /protein_id="YP_001710497.1" /db_xref="GI:170782164" /db_xref="GeneID:6157543" /translation="MRAITFPSPGSPDVLSLTELPDPVAGPGEVLIRVAAAGVNRADL SQREGAYPPPAGAPTHLGLEVSGTVEAVGQGATRWSVGDRVCALLAGGGYAELVAVDE RHVLPVPDRLDLVQAAGLPEVVATVWSNVVLDARLAPGETLLVHGGSSGIGTMAIQLA TRLGARVAVTAGSPAKLDACRALGAEILIDYREQDFVAALLEATDGRGADVILDAIGG DYIDRDIRALARDGRIMVIGAQSGAPTSIALGQLMARRGRIWGTTLRARDADDKARIV AAVRADVWPAVADGSVRPVVDRVFPLAEAAAAHAHVASSQHVGKVLLAV" misc_feature 1892084..1893031 /locus_tag="CMS_1790" /old_locus_tag="CMS1790" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 3.6e-84" gene complement(1893031..1893993) /locus_tag="CMS_1791" /old_locus_tag="CMS1791" /db_xref="GeneID:6157544" CDS complement(1893031..1893993) /locus_tag="CMS_1791" /old_locus_tag="CMS1791" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710498.1" /db_xref="GI:170782165" /db_xref="GeneID:6157544" /translation="MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature complement(1893055..1893597) /locus_tag="CMS_1791" /old_locus_tag="CMS1791" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.4e-41" misc_feature complement(1893856..1893921) /locus_tag="CMS_1791" /old_locus_tag="CMS1791" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(1894090..1895511) /locus_tag="CMS_1792" /old_locus_tag="CMS1792" /db_xref="GeneID:6157545" CDS complement(1894090..1895511) /locus_tag="CMS_1792" /old_locus_tag="CMS1792" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710499.1" /db_xref="GI:170782166" /db_xref="GeneID:6157545" /translation="MPDSAAATHADGHLDGTADGRGRTVLVVAVLASFVAFLDGTVVN VALPAIGEDLGGGLVVQQWVVDAYLITLGALILLAGSLSDAFGRVRVLRWGLVGFGVT SLVCAIAPTAGILIAARAAQGAAGALLVPSSLALIAQAFRGPAQARAIGSWTAWTGTA MLVGPVLGGVLVDTLDWRLVFGINVLPIAVTLVLLARLPHDAPVADGTRVDVPGAVLG AIGIGGPVFALIEQSRRGIAHPLVVGSLVVGVACLVLFVVRERRTPRPMLPLSLFRER DFLVGNIATVGIYGALSLGGFVIAVFLQQTGGLSATAAGFALVPTTVIMLLLSTRFGA LAGRIGPRLLMGAGPIVAGGGYLLMLRVGEPVDYWGQLLPGILVFGLGLSMTVAPLTA TILEAVPSAQAGIASAVNNAVSRVAGLVAIAAIGLVAGPDLDVAAFHRVVLVTAALLI AGGLVSLVGIRSRHAAAATEAAG" misc_feature complement(order(1894132..1894200,1894228..1894281, 1894318..1894386,1894429..1894497,1894516..1894584, 1894612..1894680,1894738..1894806,1894819..1894878, 1894915..1894983,1894996..1895064,1895083..1895151, 1895164..1895232,1895266..1895325,1895368..1895436)) /locus_tag="CMS_1792" /old_locus_tag="CMS1792" /note="14 probable transmembrane helices predicted for CMS1792 by TMHMM2.0 at aa 26-48, 63-82, 94-116, 121-143,150-172, 177-199, 212-231, 236-258, 278-300, 310-332,339-361, 376-398, 411-428 and 438-460" misc_feature complement(1894222..1895427) /locus_tag="CMS_1792" /old_locus_tag="CMS1792" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(1895582..1896316) /locus_tag="CMS_1793" /old_locus_tag="CMS1793" /db_xref="GeneID:6157546" CDS complement(1895582..1896316) /locus_tag="CMS_1793" /old_locus_tag="CMS1793" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710500.1" /db_xref="GI:170782167" /db_xref="GeneID:6157546" /translation="MTTAGPDPLPPLTLLRKALDWALDYAYVLRWQAAATLSRDDARS FEDGRDDRPTILVLPGVYERWQFMLPIIRRLHARGHGVHVVGALGANVGRVAEMSRRA RAYLEAEDLRDVVIVAHSKGGLIGKHLMAFGDPDRRIRAMVAINTPFGGSSYARLIPV RSIRDFSPRNAALVELGRSREVNARITSVFARFDPHIPGGSSLDGATDERVRASGHFR IMGDEDVLRRVEAAIDRAGTAAAPPA" gene complement(1896384..1897313) /locus_tag="CMS_1794" /old_locus_tag="CMS1794" /db_xref="GeneID:6157547" CDS complement(1896384..1897313) /locus_tag="CMS_1794" /old_locus_tag="CMS1794" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710501.1" /db_xref="GI:170782168" /db_xref="GeneID:6157547" /translation="MRSPLARLTRVRLPGDVHRTESAPPRWLLLSRRYGSRAIPVEHD LERRTVLGFRIAIKVFRTPGGNAGRTLPTAAAGIGSAGPAGARPSFVLVHGIGVSSRY FHPVAAFLAGHGTVYAIDLPGYGESPRVRRDVTLDDHAAVVAEVIRMHGLVDPVVVGH SMGTQIVTRLAVDHPEVADRIVLIAPTLPPRTRGVVRAALALGVDTLREPLLANAVVL GDYFLRCGMRYYLRQLPHLIDDAVEERAPRIRARTLVIVGDRDAVVDRPFAQELAARI PRGTYRVARGPHVVMYTDPLGVARAIVEHARAR" misc_feature complement(1896402..1896974) /locus_tag="CMS_1794" /old_locus_tag="CMS1794" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 3e-15" gene 1897398..1898531 /gene="hisC" /locus_tag="CMS_1795" /old_locus_tag="CMS1795" /db_xref="GeneID:6157548" CDS 1897398..1898531 /gene="hisC" /locus_tag="CMS_1795" /old_locus_tag="CMS1795" /EC_number="2.6.1.9" /note="catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="YP_001710502.1" /db_xref="GI:170782169" /db_xref="GeneID:6157548" /translation="MSPAWSETTLADLPLRDGIRGEEPYGAPQLDVPVLLNVNENPYP LPEEVAVAVSEAVLEAARGLNRYPDREFLELRTELAGYLTADSGLALGPENVWAANGS NEVLQQVLQAFGGTDRVALSFAPHYAMYPEYARNTLTTWVSGRRQEDFTLDLANVTDL VAEHQPSVVFLTSPNNPTGTALTTREIEHVLSVAPGVVVIDEAYAEFRREGVPTAISL LPDHPRLIVSRTMSKAFAFAGGRLGYLAASPAVVDALRIVRLPYHLSRITQVSATAAL RHSGVLLAQVASLREERDGLVEWLRGRGFEVAPSDANFVLFGRFPGVHPADRHAVWQG LLDRGVLIRETGPEGWLRVSVGTPSETAAFRDALDDVLGIPRA" misc_feature 1897629..1898513 /gene="hisC" /locus_tag="CMS_1795" /old_locus_tag="CMS1795" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 2.6e-44" misc_feature 1898085..1898114 /gene="hisC" /locus_tag="CMS_1795" /old_locus_tag="CMS1795" /note="PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site." gene complement(1898569..1899498) /locus_tag="CMS_1796" /old_locus_tag="CMS1796" /db_xref="GeneID:6158750" CDS complement(1898569..1899498) /locus_tag="CMS_1796" /old_locus_tag="CMS1796" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710503.1" /db_xref="GI:170782170" /db_xref="GeneID:6158750" /translation="MSGEPRLPDLAGRTVLVTGANGGIGFWTSAQLADAGARVLLACR SEERGDAAARAIRARTPRADLEVVPLDLANLARVDACAAAVHEDLDVIVANAGLTPAG GRARHHRTTIDGFEELMGTNALGHFALVAGVAPRLRAGGRVVMLGSLAHRFSPLDLGD LAGERRMPALVRYGRSKTACMMIAGELDRRWRAAGYDRIALSAHPGYAVDALMPPQDP ADRPRGIAAARHRVARAGRVLVQGKDAGAWPVVHAAVAPGVTGGDLWGPGGPLELRGA PAPAFVAEHARSHAVAEQLWAAAEDATGIRFRP" misc_feature complement(1898689..1899456) /locus_tag="CMS_1796" /old_locus_tag="CMS1796" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 4.1e-10" gene complement(1899495..1902080) /locus_tag="CMS_1797" /old_locus_tag="CMS1797" /db_xref="GeneID:6157549" CDS complement(1899495..1902080) /locus_tag="CMS_1797" /old_locus_tag="CMS1797" /codon_start=1 /transl_table=11 /product="putative helicase" /protein_id="YP_001710504.1" /db_xref="GI:170782171" /db_xref="GeneID:6157549" /translation="MENSAAGRVGEDGRIMSDTALAPTLTEEAARLAVDGATDDAIYD AFAEWAIGRGIELYPAQDEAALEIASGANLILSTPTGTGKSLVAVAAHFAALARGRRS YYTAPIKALVSEKFFALVELFGAAQVGMVTGDSSVNPDAPIICCTAEILANRSLRGGA ETPVDQVVMDEFHFYADPQRGWAWQVPLLLLPHAQFVLMSATLGDVTELADDLTRRTG RPTARITGIERPVPLFFHYAVTPVQETVEELLDTKQAPVYIVHFAQAAALERAQALSS IKIVTREQRDEIADLIGDFRFSTAFGKTLSRLVRAGIGVHHAGMLPKYRRLVEQLAQR GLLRVICGTDTLGVGINVPIRTVLFTGLTKYDGTRMRQLNAREFHQIAGRAGRAGYDT TGTVVAQAPEHETENIKMLERAGDDVKKRRKLVRKKAPEGFVSWGEPSFRKLIDAEPE RLTSSMQVSHAMMLNVIARGGDVFQNMRSLVEDNHEPRVRQLALARRALAIYRTLRTA GIVEQVDDPDGGPARISLTVDLQADFALNQPLSPFAVAVFEILDRESPTYALDMLSVV EATLDDPRPILSQQQFKARGEAVQAMKADGIEYDERMELLETVTHPKPLEELLDQSFA TYSASQPWIGDFALSPKSVVRDMYERAMSFSELISFYGLMRSEGLVLRYLSDAFRALR QTIPDEAKTEELLDVIEWLGELVRQVDSSLLDEWEELSHPTAAPGDAPVLPPAPKLLT SNTRAFRILVRNEMFRRVQLAAREDLQALGELDAAAGYDADAWGDALDGYFGEYDRIL TDGDARSQALVTITESPTEWTVRQALHDPDGDHDWGIEATVDLDASNEAGEAVVRVTR VGTLS" misc_feature complement(1900914..1901162) /locus_tag="CMS_1797" /old_locus_tag="CMS1797" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 1.9e-10" misc_feature complement(1901451..1901912) /locus_tag="CMS_1797" /old_locus_tag="CMS1797" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 3.3e-13" gene 1902123..1902386 /locus_tag="CMS_1798" /old_locus_tag="CMS1798" /db_xref="GeneID:6157550" CDS 1902123..1902386 /locus_tag="CMS_1798" /old_locus_tag="CMS1798" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710505.1" /db_xref="GI:170782172" /db_xref="GeneID:6157550" /translation="MPSQPLDPRHDRAPLDPSPAPPVEGQPTTADADSAPGAVAAPES VPVDPETERARWRDRRTGVIALVVVTIALWAVIAAAVGFATTM" misc_feature 1902309..1902377 /locus_tag="CMS_1798" /old_locus_tag="CMS1798" /note="1 probable transmembrane helix predicted for CMS1798 by TMHMM2.0 at aa 63-85" gene 1902457..1904043 /locus_tag="CMS_1799" /old_locus_tag="CMS1799" /db_xref="GeneID:6157551" CDS 1902457..1904043 /locus_tag="CMS_1799" /old_locus_tag="CMS1799" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710506.1" /db_xref="GI:170782173" /db_xref="GeneID:6157551" /translation="MPSDALPDDPARPADPVAPSPDADATTDAASMPEGDPATKAAAA SPGSAIDPDDLATALRVLGSLADIDEDHPDFVAVRRATASMFKEVKKARRLEKREAVA SADRAVVAATATGAPDRIDDETRGIPLSITTAKPTAGTLLRSRPCYICKQHYTQVDAF YHQLCPDCALLNHAKREARTDLSGMRALLTGGRAKIGMHIALRLLRDGAHTTITTRFP RDAVRRFAGLPDAHEWVHRLRIVGLDLRDPAQVIGLTDAVAAAGPLDILINNAAQTVR RSPGSYAPLSEAEAAPLPDGDLPELLTFGHTADAHPAALAASVAAHPILSTAAGITAA EVTELAMTAGSSSLARLAAGTAIDAGGLVPDLHDANSWTQVVHEVDPLEMLEVQLANV TAPFLLVSRLRPAMAASASRRKYVVNVSAMEGQFARAYKGPGHPHTNMAKAALNMMTR TSAREMRETDRILMTSVDTGWITDERPHPTKVRLAEEGFHAPLDLVDGAARVYDPIVM GQAGEDISGVFLKDYRVAEW" misc_feature 1903471..1903506 /locus_tag="CMS_1799" /old_locus_tag="CMS1799" /note="PS00455 Putative AMP-binding domain signature." gene complement(1904118..1904390) /gene="ptsH" /locus_tag="CMS_1800" /old_locus_tag="CMS1800" /db_xref="GeneID:6157552" CDS complement(1904118..1904390) /gene="ptsH" /locus_tag="CMS_1800" /old_locus_tag="CMS1800" /codon_start=1 /transl_table=11 /product="phosphocarrier protein Hpr" /protein_id="YP_001710507.1" /db_xref="GI:170782174" /db_xref="GeneID:6157552" /translation="MTERTATIGSRVGLHARPASLFIEAVRRTGVAVKISKPGGTPLD ATSILSLMSLGAANGDQVVLTAEGDGADAALDELAALLESDLDAVE" misc_feature complement(1904136..1904390) /gene="ptsH" /locus_tag="CMS_1800" /old_locus_tag="CMS1800" /inference="protein motif:HMMPfam:PF00381" /note="HMMPfam hit to PF00381, Phosphocarrier HPr protein,score 1.8e-13" misc_feature complement(1904331..1904354) /gene="ptsH" /locus_tag="CMS_1800" /old_locus_tag="CMS1800" /note="PS00369 PTS HPR component histidine phosphorylation site signature." gene complement(1904436..1906484) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /db_xref="GeneID:6158891" CDS complement(1904436..1906484) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /EC_number="2.7.1.69" /codon_start=1 /transl_table=11 /product="PTS system fructose-specific EIIBC component" /protein_id="YP_001710508.1" /db_xref="GI:170782175" /db_xref="GeneID:6158891" /translation="MPSLITNRLVLLDADLGADREHAVRTLAERVVAEGRATDADALF ADAWERESKTDTGMGGGLAIPHCRSAAVTEATLVMARPAPAVDFGAPDGPADLVFFIA APDGADQEHLVLLSRLARSLIKPEFVEALRSATDEDQVVWLVEGALVDEPASSTGAPA AAAPAAAASAPAKAPADAPVLIAVTACPTGIAHTYMAADSLVAAAKRAGVELHVETQG SSSVTPVDPAIIARATAVIFAVDVDVRDRARFAGKPVIQSPVKRGIDQPDQMVAEAVA AAKDPNAPRVPGGASSAGSEQASPQASQSVGARLKRWLLTGVSYMIPFVAGGGLLIAL GFLLGGYRITETASDVVLQNSLADLPAGGLGQYLGAVAFVIGNASMAFLVPALAGYIA YAIADRPGIAPGFVAGSISVIMGAAFLGGLVGGLVAGGIAYAIGRIDVPRWLRGLMPV VIIPLLASIVASGLMVMVLGGPIAALTRGLNGFLSGLTGTSAIVLGIILGVMMCIDLG GPINKVAYSFAVAGLGAGSITDQTPWEIMAAVMAAGMVPPLALALASTVIDRRLFSPA ERENGKAAWLLGAAFISEGAIPFAAVDPLRVIPASIVGGAVTGAMVMGLGVVSQAPHG GVFVLFAMNGTFLGFLASVAVGAVISAFLVVLLKRFTTKRPEAVAETSAADQGVPVAA" misc_feature complement(order(1904517..1904585,1904628..1904696, 1904709..1904768,1904811..1904879,1904970..1905038, 1905081..1905149,1905186..1905254,1905297..1905365, 1905465..1905533)) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /note="9 probable transmembrane helices predicted for CMS1801 by TMHMM2.0 at aa 318-340, 374-396, 411-433,446-468, 483-505, 536-558, 573-592, 597-619 and 634-656" misc_feature complement(1904673..1905542) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /inference="protein motif:HMMPfam:PF02378" /note="HMMPfam hit to PF02378, Phosphotransferase system,EIIC, score 4.8e-28" misc_feature complement(1905642..1905947) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /inference="protein motif:HMMPfam:PF02379" /note="HMMPfam hit to PF02379, Phosphotransferase system PTS, fructose-specific IIB subunit, score 2.7e-31" misc_feature complement(1906044..1906478) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /inference="protein motif:HMMPfam:PF00359" /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, score 1.5e-18" misc_feature complement(1906284..1906334) /gene="fruA" /locus_tag="CMS_1801" /old_locus_tag="CMS1801" /note="PS00372 PTS EIIA domains phosphorylation site signature 2." gene complement(1906507..1907478) /locus_tag="CMS_1802" /old_locus_tag="CMS1802" /db_xref="GeneID:6158694" CDS complement(1906507..1907478) /locus_tag="CMS_1802" /old_locus_tag="CMS1802" /codon_start=1 /transl_table=11 /product="putative 1-phosphofructokinase" /protein_id="YP_001710509.1" /db_xref="GI:170782176" /db_xref="GeneID:6158694" /translation="MILTLTANPSLDRTIDLAGALARGAVQRARGVAEQPGGKGVNVS RALIASGLDTIALLPGRLDDPMLVALAAERIPLDHLDIDGRVRQNVTLTEPDGTTTKV NEPGPELSAAEADALVALVIRHARRASWLVLAGSLPPGLDDDFHARVVQAVRAELGDA APRIAVDSSGAPMAALVASDAVVDLIKPNAEELAELVGIDDPDALEADPRRAHDASRS LVSRGCRAVLATLGARGAVLTTSEGGWLATMPPIVPVSTVGAGDSSLAGYLLADHRGA GPEGRLAQAVAHGSAAASLPGSTMPSPDQTRPDSVTVQPLLPIAADR" misc_feature complement(1906564..1907460) /locus_tag="CMS_1802" /old_locus_tag="CMS1802" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 7.3e-18" misc_feature complement(1906672..1906713) /locus_tag="CMS_1802" /old_locus_tag="CMS1802" /note="PS00584 pfkB family of carbohydrate kinases signature 2." gene complement(1907475..1908206) /locus_tag="CMS_1803" /old_locus_tag="CMS1803" /db_xref="GeneID:6157553" CDS complement(1907475..1908206) /locus_tag="CMS_1803" /old_locus_tag="CMS1803" /codon_start=1 /transl_table=11 /product="DeoR family transcriptional regulator" /protein_id="YP_001710510.1" /db_xref="GI:170782177" /db_xref="GeneID:6157553" /translation="MAVVGLARDFDVTTETVRRDLAQLESRGVLRRVHGGAVLAGRST RAEESLDTRGSRNTAAKARIADAAMAFLPASFEGSIALDAGTTTGLVAERVAAWRPDV PGRTLVVVTHSMAVAQTVTRNPAVEVQLLGGRVRGITSAAVGPATLGQLARLRPDIAF IGANGIHAEFGLSTPDEEEAAVKTALTRGSRRAVALVDASKAGEEALVGFAALGDLDT LVTDAAPDGPLADALAAAEVEVMVA" misc_feature complement(1907541..1908206) /locus_tag="CMS_1803" /old_locus_tag="CMS1803" /inference="protein motif:HMMPfam:PF00455" /note="HMMPfam hit to PF00455, Bacterial regulatory protein, DeoR, score 1.6e-45" gene complement(1908399..1909427) /locus_tag="CMS_1804" /old_locus_tag="CMS1804" /db_xref="GeneID:6157554" CDS complement(1908399..1909427) /locus_tag="CMS_1804" /old_locus_tag="CMS1804" /codon_start=1 /transl_table=11 /product="putative secreted hydrolase" /protein_id="YP_001710511.1" /db_xref="GI:170782178" /db_xref="GeneID:6157554" /translation="MDRRPERPVSRTRSRSRPMAGIRIRGAAAVAVVTALVLLASGCT SADPVTLPTAAAPLRVVSLGDSYSTGTGSAEPLPGDPGVCGRTVASSVRVAAAEVGAD FVDAACDGASTADLVAPRERGGQTVPAQLDSLADGADVVLVRLGGNDLGFPALVGGCL ARDPEGPVAAGPTTCVDALAPSGGTDAVRARIDGEVSTRLGEAFARIRAAAPDARIVA LGYLTVLGDPDALPAEGCLRATATSAVNGQVLLADRDAVWLAGIQRELDAAIARAAGD AGARFVDQETPTAEHGACAGDAGDPYVAGLGGSAGDVPLHPNAAGQAWESEVLAGVLR EEAVALGR" sig_peptide complement(1908399..1908536) /locus_tag="CMS_1804" /old_locus_tag="CMS1804" /note="Signal peptide predicted for CMS1804 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.616 between residues 46 and 47" misc_feature complement(1909299..1909367) /locus_tag="CMS_1804" /old_locus_tag="CMS1804" /note="1 probable transmembrane helix predicted for CMS1804 by TMHMM2.0 at aa 21-43" gene complement(1909470..1909844) /locus_tag="CMS_1805" /old_locus_tag="CMS1805" /db_xref="GeneID:6157555" CDS complement(1909470..1909844) /locus_tag="CMS_1805" /old_locus_tag="CMS1805" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710512.1" /db_xref="GI:170782179" /db_xref="GeneID:6157555" /translation="MEDPGSVNEVIETWSSTMSHATLHRTHTTDPHRTSVVGSAVLGF LAAFVVGAAVIVTLLITSFAQGTEGYPGLDVPGVVDTRIDHGSVVTQIGPGGFFFPLA AGLVVGLIVAVVVYARQRGAED" misc_feature complement(order(1909494..1909562,1909653..1909721)) /locus_tag="CMS_1805" /old_locus_tag="CMS1805" /note="2 probable transmembrane helices predicted for CMS1805 by TMHMM2.0 at aa 42-64 and 95-117" gene 1909898..1910836 /locus_tag="CMS_1806" /old_locus_tag="CMS1806" /db_xref="GeneID:6157556" CDS 1909898..1910836 /locus_tag="CMS_1806" /old_locus_tag="CMS1806" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710513.1" /db_xref="GI:170782180" /db_xref="GeneID:6157556" /translation="MVPWGMLNALPWILVVLLLAALALLCVDRRRRRARHGEALQEQR ARHEREVALSDLQHAADAASRAEAHAAELADRAAAREEAEEAAHEARRQLARTWKTDR VSHDLIVAACAAARIGGALATNVVLTGTEPKTKRRFLVQVDHVLLTPRAALIIENKHW RGLVLDAVRPKDLHEFWGALLARYDVDPPAVLHITSDGDDGAFHVRRADPTPVAQVRR QSLRLAAHVQDALGSAPFFHTVVFYSHADAEVIAPEDGEERGATRRILSPAELAPGLR RVMQVSTSPVSRESMVHMTELFASDGAHVEWVGPLA" misc_feature order(1909907..1909975,1910216..1910284) /locus_tag="CMS_1806" /old_locus_tag="CMS1806" /note="2 probable transmembrane helices predicted for CMS1806 by TMHMM2.0 at aa 4-26 and 107-129" gene complement(1910939..1911011) /locus_tag="CMS_r009" /old_locus_tag="CMSr009" /db_xref="GeneID:6157557" tRNA complement(1910939..1911011) /locus_tag="CMS_r009" /old_locus_tag="CMSr009" /product="tRNA-Ala" /db_xref="GeneID:6157557" gene complement(1911112..1911507) /locus_tag="CMS_1807" /old_locus_tag="CMS1807" /db_xref="GeneID:6159028" CDS complement(1911112..1911507) /locus_tag="CMS_1807" /old_locus_tag="CMS1807" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710514.1" /db_xref="GI:170782181" /db_xref="GeneID:6159028" /translation="MMSEGVGVEIDYCPDCRGVWLDRGELDKILDRAEQETRVAPAAA SPVPPAAPLGGYPEPGRDDRRRDDDRRRDDDRDRDRAHGSRGDVYGDRDVAGYSTTGA YPTAGDYPQGSGHGGKRREKESWLSKLFD" gene complement(1911590..1911967) /locus_tag="CMS_1808" /old_locus_tag="CMS1808" /db_xref="GeneID:6157558" CDS complement(1911590..1911967) /locus_tag="CMS_1808" /old_locus_tag="CMS1808" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710515.1" /db_xref="GI:170782182" /db_xref="GeneID:6157558" /translation="MTASPRALDLLKVAASAADSKQAIDLVALDVSGPLPLTDVFLIA SARNERNAQAVADEIEDKMIEAGAKPLRREGKSEGRWILLDFGDVVAHVFTEEDRMYY SLERLWKDCPVVALEIEPTASAS" misc_feature complement(1911641..1911946) /locus_tag="CMS_1808" /old_locus_tag="CMS1808" /inference="protein motif:HMMPfam:PF02410" /note="HMMPfam hit to PF02410, Iojap-related protein,score 1.6e-40" gene complement(1912007..1913551) /locus_tag="CMS_1809" /old_locus_tag="CMS1809" /db_xref="GeneID:6157559" CDS complement(1912007..1913551) /locus_tag="CMS_1809" /old_locus_tag="CMS1809" /codon_start=1 /transl_table=11 /product="putative membrane anchored protein" /protein_id="YP_001710516.1" /db_xref="GI:170782183" /db_xref="GeneID:6157559" /translation="MTPSHDAPDTGPTSFDDGPAPATLGLSRREMRAAERARARELGI DEAGDAPADESTPVDGGSTTGSPDEPVATSTPSSDGPDDLASTAQDASAPRPDEATTP PAAPGIGPDTSAILLSGGVLTRRQLRAIREAEEAAREQHGSDHEEPQPQPQPTASESD AEQSGGEPSAAVDDAPPTSSDSSVPPFARYGRGSRATPRPRAPYGSAYRRASAADTTE APAPAPTADDDAQVVTSDVSSDEAAASERQATPAETPSAWPFAPIVPSGDAADRDVDA SGEQPTVPPLAAHTPSTDEDPRPAPSLEPTPWVTGSAEPSLEPAFGTRASAAAEDLEG ARVEAPEAGAPSAVPSPADATAPGVPDARTPFTPPAGHWSVQDQVDEDQPHTGNHFIL PTVPHVNDMQQALNSTGEIIITGSIDLPRSLGSMGTHPDRFDTADMDRILEQGDDHDH APGGTDSEPVRASRAVSTHTSTRAVVQPPPRKRFTAPVVAAVAAGGVAVIGAGLVIVA FMTNVF" misc_feature complement(1912022..1912090) /locus_tag="CMS_1809" /old_locus_tag="CMS1809" /note="1 probable transmembrane helix predicted for CMS1809 by TMHMM2.0 at aa 488-510" gene complement(1913548..1914150) /gene="nadD" /locus_tag="CMS_1810" /old_locus_tag="CMS1810" /db_xref="GeneID:6157560" CDS complement(1913548..1914150) /gene="nadD" /locus_tag="CMS_1810" /old_locus_tag="CMS1810" /EC_number="2.7.7.18" /note="transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase" /protein_id="YP_001710517.1" /db_xref="GI:170782184" /db_xref="GeneID:6157560" /translation="MTTAATPRLRIGVMGGTFDPIHNGHLVAASEVQQHLQLDEVIFV PTGQPWQKQTVTDGEHRYLMTVIATAANPRFTVSRVDIDRAGTTYTIDTLRDIRRTHP DAELFFITGADAIQQILGWKDVAELWDLAHFVAVTRPGHDLTESGLPHADVRLLEVPA LAISSTDCRARVGRGFPVWYLVPDGVVQYISKHHLYRSPL" misc_feature complement(1913638..1914114) /gene="nadD" /locus_tag="CMS_1810" /old_locus_tag="CMS1810" /inference="protein motif:HMMPfam:PF01467" /note="HMMPfam hit to PF01467, Cytidylyltransferase, score 4e-46" gene complement(1914168..1914383) /locus_tag="CMS_1811" /old_locus_tag="CMS1811" /db_xref="GeneID:6158836" CDS complement(1914168..1914383) /locus_tag="CMS_1811" /old_locus_tag="CMS1811" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710518.1" /db_xref="GI:170782185" /db_xref="GeneID:6158836" /translation="MHALTTTLLAETEHAMELAAPLWVFPAVAAVVFVALGVVMYSFR DVSNRHSEKWGKPPVAEQGHGTADSTH" misc_feature complement(1914258..1914326) /locus_tag="CMS_1811" /old_locus_tag="CMS1811" /note="1 probable transmembrane helix predicted for CMS1811 by TMHMM2.0 at aa 20-42" gene complement(1914482..1915843) /gene="proA" /locus_tag="CMS_1812" /old_locus_tag="CMS1812" /db_xref="GeneID:6157561" CDS complement(1914482..1915843) /gene="proA" /locus_tag="CMS_1812" /old_locus_tag="CMS1812" /EC_number="1.2.1.41" /note="Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway" /codon_start=1 /transl_table=11 /product="gamma-glutamyl phosphate reductase" /protein_id="YP_001710519.1" /db_xref="GI:170782186" /db_xref="GeneID:6157561" /translation="MSTVAAGGLPRLPVMPSNAPGASAVVPAIPSSPAEALPTEALER ILEAVRTASTSLAASTSGQRDAALDAVSTALVSAADRIVDANADDLAAGRESGLAAGL LDRLTLDARRVASLADAVAGIRSLDDPLGHVVRGRTLPNGLLLSQVRVPFGVVGAIYE ARPNVTVDIAALALKSGNAVVLRGGSAALRTNAVLVDVMRAALEGSGLPADALQTIDA HGRAGATRLMRARGLVDVLVPRGSADLIRTVVEESTVPVIETGAGVVHVYLDASADAR MAVDIAVDAKVSRPSVCNAMETLLVHRDAAPRILPAVLDALRDRGVTVHGDAAVRELW PDAVPATDADWAAEYLSLDVAVRVVDSVEDAVAHIARWSTHHTESIVTSDLAVAERFL AAVDSAVVMVNASTRFTDGSEFGFGAEVGISTQKLHARGPMGLQELTSTKWIVRGSGQ IRG" sig_peptide complement(1914482..1914589) /gene="proA" /locus_tag="CMS_1812" /old_locus_tag="CMS1812" /note="Signal peptide predicted for CMS1812 by SignalP 2.0 HMM (Signal peptide probability 0.929) with cleavage site probability 0.563 between residues 36 and 37" gene complement(1915849..1916628) /gene="proB" /locus_tag="CMS_1813" /old_locus_tag="CMS1813" /db_xref="GeneID:6158882" CDS complement(1915849..1916628) /gene="proB" /locus_tag="CMS_1813" /old_locus_tag="CMS1813" /EC_number="2.7.2.11" /note="catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis" /codon_start=1 /transl_table=11 /product="gamma-glutamyl kinase" /protein_id="YP_001710520.1" /db_xref="GI:170782187" /db_xref="GeneID:6158882" /translation="MGTASRAGIASARRIVVKVGSSSISGENAGQIAPLVDAIAAAHA RGAEVVLVSSGAIATGMPFLRLDDRPADLATQQAAAAVGQSVLIFRYQESLDRYGIVA GQVLLTAGDLAAPDHRENAQRAMERLLGLRLLPVVNENDTVATHEIRFGDNDRLAALV ARLVDADLLLLLSDVDALYSRPPEEPGARRIEHVAFGDELEGVEIGSTGTGVGTGGAV TKVAAARLAAEAGTGVLLTSTAQVAEALAGAHVGTWFAPRS" misc_feature complement(1915915..1916580) /gene="proB" /locus_tag="CMS_1813" /old_locus_tag="CMS1813" /inference="protein motif:HMMPfam:PF00696" /note="HMMPfam hit to PF00696,Aspartate/glutamate/uridylate kinase, score 1.4e-47" gene complement(1916632..1918185) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /db_xref="GeneID:6158883" CDS complement(1916632..1918185) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /note="essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication" /codon_start=1 /transl_table=11 /product="GTPase ObgE" /protein_id="YP_001710521.1" /db_xref="GI:170782188" /db_xref="GeneID:6158883" /translation="MATFVDTVTLHLRAGNGGNGCVSVRREKFKPLAGTDGGNGGNGG DIVLVADPQVTTLLAYHRGPHRSSRNGGPGMGDHRHGTLGETLELPVPVGTVVKDADG NELADMATPGMRFIAAEAGQGGLGNASLATTKRKAPGFALLGTQGYEGDVVLELKVVA DVALVGYPSAGKSSLVAAISAAKPKIADYPFTTLHPNLGVVEVADSRYTVADVPGLIE GASEGKGLGLEFLRHVERCSALLHVLDCATLDPGRDPVSDLDIILTELAAYPVPDGQV PLLERPQLIALNKIDVPEARELAELVRPELEARGYRVFDISTVSHDGLRQLSFALAEL VKDARTKAAEEPEAPRIVLRPRAVDEKPFTIRVDGGSYGDIYRVIGTKPERWVQQTDF RNDEAVGYLADRLAKLGVEDGLFKAGAVAGSSVVIGEGDGVVFDWEPTLTSTAELITS PRGADARVDPISRRTNQARREDYFARMDAKAEARAELVREGEAGLWADEDGTGQDGTD EDATTDAKA" misc_feature complement(1917313..1917708) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 2.8e-38" misc_feature complement(1917511..1917552) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /note="PS00905 GTP1/OBG family signature." misc_feature complement(1917667..1917690) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1917712..1918176) /gene="obgE" /locus_tag="CMS_1814" /old_locus_tag="CMS1814" /inference="protein motif:HMMPfam:PF01018" /note="HMMPfam hit to PF01018, GTP1/OBG subdomain, score 2.1e-60" gene complement(1918305..1918559) /gene="rpmA" /locus_tag="CMS_1815" /old_locus_tag="CMS1815" /db_xref="GeneID:6157562" CDS complement(1918305..1918559) /gene="rpmA" /locus_tag="CMS_1815" /old_locus_tag="CMS1815" /note="involved in the peptidyltransferase reaction during translation" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27" /protein_id="YP_001710522.1" /db_xref="GI:170782189" /db_xref="GeneID:6157562" /translation="MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVGAGEIIVRQRGTH FHPGVNVGRGGDDTLFALSAGSVEFGVKGGRKVVNIVVPA" misc_feature complement(1918317..1918556) /gene="rpmA" /locus_tag="CMS_1815" /old_locus_tag="CMS1815" /inference="protein motif:HMMPfam:PF01016" /note="HMMPfam hit to PF01016, Ribosomal protein L27,score 1.2e-53" misc_feature complement(1918416..1918460) /gene="rpmA" /locus_tag="CMS_1815" /old_locus_tag="CMS1815" /note="PS00831 Ribosomal protein L27 signature." gene complement(1918584..1918892) /gene="rplU" /locus_tag="CMS_1816" /old_locus_tag="CMS1816" /db_xref="GeneID:6158954" CDS complement(1918584..1918892) /gene="rplU" /locus_tag="CMS_1816" /old_locus_tag="CMS1816" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L21" /protein_id="YP_001710523.1" /db_xref="GI:170782190" /db_xref="GeneID:6158954" /translation="MVYAVVRAGGRQEKVEVGTIVTMDRVKNQQSGKVVLPAVLLVDG DTITTDAAKLADVTVSAEILNDLRGPKIVIQKFKNKTGYKKRQGHRQDLTRVQVTEIN" misc_feature complement(1918605..1918889) /gene="rplU" /locus_tag="CMS_1816" /old_locus_tag="CMS1816" /inference="protein motif:HMMPfam:PF00829" /note="HMMPfam hit to PF00829, Ribosomal protein L21,score 5.2e-32" gene 1919184..1919462 /locus_tag="CMS_1817" /old_locus_tag="CMS1817" /db_xref="GeneID:6158951" CDS 1919184..1919462 /locus_tag="CMS_1817" /old_locus_tag="CMS1817" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710524.1" /db_xref="GI:170782191" /db_xref="GeneID:6158951" /translation="MNVLLDRPAWPAHGRLWAHLVSDASLEELHAFARAAGIPERAFD RDHYDVPEERHAELVVLGAVPVSNRDLVRRLQASGLRVTQRERRAPGS" gene complement(1919552..1922599) /locus_tag="CMS_1818" /old_locus_tag="CMS1818" /db_xref="GeneID:6157563" CDS complement(1919552..1922599) /locus_tag="CMS_1818" /old_locus_tag="CMS1818" /codon_start=1 /transl_table=11 /product="putative ribonuclease" /protein_id="YP_001710525.1" /db_xref="GI:170782192" /db_xref="GeneID:6157563" /translation="MVERDENTGRRRPSLFERLTGRRAEPTAATGTGGTPALPATATP EASGTSAASEAKGHTLNENDDTQSMPDEMEAPVVRRSRRASTAASAPAVAQPDDASVD ASASAPASTDDADTEAPAAPAARAPRKRAPRKAAVAADVEQDAPVSGIPDPDVGIPDA AVAEPAVDEPAATEPVVEAPAAPARTVPSLSVFFQAPDIAPLPPRRERDDRRDDRRDD ARDEDDDLDLDRDERPSRSPRRGGRGQDRGQERSTGRDGRGRDTRDDDHDDEDDSPSV RRRARRRSGEEGRDGDDAPGTVVKVRTPREPELITEPQRIKGSTRLEAKKQRRRDGRD AGRRRPVLTESEYLARRESVDRSMIVRSRDGKIQIGVLEDQVLVEHYVARADEASLIG NVYLGRVQNVLPSMEAAFIDIGRGRNAVLYSGEVDWEAANADKGGGSHARRIEVALKP GDRVLVQVTKDPVGHKGARLTSQVSLPGRYLVYVPNGSMNGISRKLPDTERARLKKTL KEVLPENVGVIVRTAAEGATEEQLKLDVERLTSQWAEISRQVEKAQAPALLHSEPDLL LKIIRDVFNEDFRELVIDGGDAQEIIEGYLRGVAPDLIDRVQAYSGEKDSFDHYRVSE QIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEI VRQMRLRDIGGIIVVDFIDMVLETNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMT RKKLGLGLLESFSENCETCAGRGIIIHHDPLMAHKQTPQEPVQGQGRRRGGKGQQEHG TGGGNGNGGGRGNGGGQAQQQQRTPAASTHSITEDARSALAKIATSTIQTVNEAIDRV EDVVRTPDETTEAAAPAEGAPVAEQPRGDRPRRSRGGRGRASSVVADATEQQPPQAPV AEDPSAPAEDPTPADAPVEESARSTLEPREAIRLEPVQILDIPVASARTAPRRVSSAD AEQLLGSVLDALPQPKEPGQGRSRSRRVSTPTLTTPSPTDDAS" misc_feature complement(1921181..1921438) /locus_tag="CMS_1818" /old_locus_tag="CMS1818" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 8e-05" gene 1922905..1923513 /locus_tag="CMS_1819" /old_locus_tag="CMS1819" /db_xref="GeneID:6157564" CDS 1922905..1923513 /locus_tag="CMS_1819" /old_locus_tag="CMS1819" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710526.1" /db_xref="GI:170782193" /db_xref="GeneID:6157564" /translation="MTATRAPAHPRSLAVLLVVTGVVGWIGAFVLVLDRLHLLENPGA SLSCDVNPFISCATVIESPQGSLFGFPNPLIGVAAFVVPIVIGMALFAGARFARWFWT LFALGTFAGWVFVTWLFAQSVFVIGALCPYCLLVWSAMIPLWWGTLSATARAGLLPLP AGIRRAADAVAPYTWAVVVLDYAIIVVAIVSTFPALIPTLLG" misc_feature order(1922941..1923000,1923124..1923183,1923202..1923261, 1923271..1923339,1923427..1923495) /locus_tag="CMS_1819" /old_locus_tag="CMS1819" /note="5 probable transmembrane helices predicted for CMS1819 by TMHMM2.0 at aa 13-32, 74-93, 100-119, 123-145 and 175-197" gene complement(1923576..1923995) /gene="ndk" /locus_tag="CMS_1820" /old_locus_tag="CMS1820" /db_xref="GeneID:6157565" CDS complement(1923576..1923995) /gene="ndk" /locus_tag="CMS_1820" /old_locus_tag="CMS1820" /EC_number="2.7.4.6" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="YP_001710527.1" /db_xref="GI:170782194" /db_xref="GeneID:6157565" /translation="MSAPVQETLVLVKPDGVARGLTGEILRRIEAKGYQIVDLRMVQA ERALLEQHYEEHQGKPFYEPLVEFMESGPIVAVRVAGNRAIEGFRSLAGTTDPTGAAP GTIRGDLGRDWGLAVTQNLVHGSDSPESAARELALWF" misc_feature complement(1923579..1923980) /gene="ndk" /locus_tag="CMS_1820" /old_locus_tag="CMS1820" /inference="protein motif:HMMPfam:PF00334" /note="HMMPfam hit to PF00334, Nucleoside diphosphate kinase, score 3.9e-56" misc_feature complement(1923612..1923638) /gene="ndk" /locus_tag="CMS_1820" /old_locus_tag="CMS1820" /note="PS00469 Nucleoside diphosphate kinases active site." gene complement(1924005..1924508) /locus_tag="CMS_1821" /old_locus_tag="CMS1821" /db_xref="GeneID:6158840" CDS complement(1924005..1924508) /locus_tag="CMS_1821" /old_locus_tag="CMS1821" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710528.1" /db_xref="GI:170782195" /db_xref="GeneID:6158840" /translation="MSADGRPARTRRPRPPRTTVEILGSIVMGFQVIVVFLASLVAFG LAALPAMPALGGGALLVLAMLAVVGTLRTPLGIRAGWVVQVLVVLTGFVLPAMFAVGG FFLLLWIYAMVQGARIDREKAAARGAWEQAMLDEQAATQPDAADRPGDDRPTAHRPTT EPPAPTP" sig_peptide complement(1924005..1924169) /locus_tag="CMS_1821" /old_locus_tag="CMS1821" /note="Signal peptide predicted for CMS1821 by SignalP 2.0 HMM (Signal peptide probability 0.846) with cleavage site probability 0.401 between residues 55 and 56" misc_feature complement(order(1924179..1924247,1924284..1924352, 1924380..1924448)) /locus_tag="CMS_1821" /old_locus_tag="CMS1821" /note="3 probable transmembrane helices predicted for CMS1821 by TMHMM2.0 at aa 21-43, 53-75 and 88-110" gene complement(1924505..1926079) /gene="folC" /locus_tag="CMS_1822" /old_locus_tag="CMS1822" /db_xref="GeneID:6157566" CDS complement(1924505..1926079) /gene="folC" /locus_tag="CMS_1822" /old_locus_tag="CMS1822" /EC_number="6.3.2.17" /codon_start=1 /transl_table=11 /product="folylpolyglutamate synthase" /protein_id="YP_001710529.1" /db_xref="GI:170782196" /db_xref="GeneID:6157566" /translation="MSDQQGGRPFDDDPDDVRRDDDFEPETDEGVDAAARALDPDVDG LSDDQLFADDAAELRREAEQSIVAGREVDDENYFEREGDAVYQALLARVGEQAPQPRL SATRRVVELLGDPQRAYPIVHVTGTNGKTSTSRMTESILRAAGLRTGLFTSPHLVRFN ERIVVDGLPISDEALSRNWADVEPFIDLVDRELVAAGEEPVTFFEALTVLAFASFADA PVDVAVIEVGMGGEWDSTNVGDGQVAVFTPVSLDHTQRLGSTVAEIARTKSGIVKPAA DVVSSAQLPEVVAELTRAAELTESTWSIEGERFRLLDTTLAVGGQVISVQGLAGTYRD VFLPMFGAHQAQNAAVAIAAVESFLGGGDHAIHDDVLAEGLATATSPGRLQVVGTEPT VLVDAAHNPAGAASLAAALPVYFTFDRVTAVIGVLEGKDAEGIVRELAPVVDHFIVTR STSERSVDPDELARVVVGVVGRDRVTVEPDLRTALEDARDSAGETEKGAALVSGSILL VGEAIAHAADEGWKTA" misc_feature complement(1924685..1924942) /gene="folC" /locus_tag="CMS_1822" /old_locus_tag="CMS1822" /inference="protein motif:HMMPfam:PF02875" /note="HMMPfam hit to PF02875, Cytoplasmic peptidoglycan synthetases, C-terminal, score 1.5e-07" misc_feature complement(1924964..1925920) /gene="folC" /locus_tag="CMS_1822" /old_locus_tag="CMS1822" /inference="protein motif:HMMPfam:PF01225" /note="HMMPfam hit to PF01225, Cytoplasmic peptidoglycan synthetase, N-terminal, score 2.6e-28" misc_feature complement(1925645..1925716) /gene="folC" /locus_tag="CMS_1822" /old_locus_tag="CMS1822" /note="PS01011 Folylpolyglutamate synthase signature 1." gene complement(1926076..1929381) /gene="ileS" /locus_tag="CMS_1823" /old_locus_tag="CMS1823" /db_xref="GeneID:6158691" CDS complement(1926076..1929381) /gene="ileS" /locus_tag="CMS_1823" /old_locus_tag="CMS1823" /EC_number="6.1.1.5" /note="IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="YP_001710530.1" /db_xref="GI:170782197" /db_xref="GeneID:6158691" /translation="MTYPRPVPDDPSAPDQVAASPRFPDVEKGILAFWKRDDTFRASV ERREGCDEWVFYDGPPFANGLPHYGHLLTGYAKDAFPRFQTMRGKQVHRRFGWDTHGL PAELEAMRQLGITEKSEIEEMGVEEFNAVARRSVLEYTGEWEDYVTRSARWVDFEDDY KTLDLDFMESVIWAFKQLHTKGLAYEGFRVLPYCWHDQTPLSNHELRMDDDVYRMRQD QSVTVTFPLVGAKAESLGLTAVRALAWTTTPWTLPTNMALAVGPDIVYAVVPAGPAGA PDSEAPDALPRESSVRLAAEVLGSEYLIAQDLVGNYAKDLGYASAEDARAAVSRTVLG RELEGVAYDRLWDFYADTEVFGTENAWQVLVADYVTTTDGTGIVHQAPAYGEEDQQVC AAAGIPVILSLDEGGRFVDSVPEVAGELWSDAGRTLTRMLKAQGRLIRQASYEHSYPH CWRCKNPLIYKAVSSWFVRVTDFRDDMVRLNQDIEWTPENVKDGQFGKWIGNARDWSI SRNRFWGSPIPVWKSDDPAYPRIDVYGSLDELEADFGVRPTDLHRPFIDGLTRPNPDD PTGRSTMRRIEDVLDVWFDSGSMPFAQVHYPFENREWFDAHSPADFIVEYIGQTRGWF YTLHALSTALFGRPAFSSVVSHGIVLGNDGQKMSKSLRNYPDVNEVFDRDGSDAMRWF LLASPVLRGGNLVVTEEGIREGVRQVLLPLWSTWYFFSLYANSAQPGGYEAHRDTTSD DVLDRYVLARTRRLVTEVTEHMTALDSTLAAASLRDFADVLTNWYVRRSRDRFWAGTE AGDTRAFDTLYTVLETVTRVAAPLLPLVSERIWKDLTGGRSVHLEDWPEPDDLPADDR LVEVMDRVRQVASTALSLRKQSGLRVRQPLARLTVVSDDADGLARFEDILRDELNVKA VAVEELTPTSAADAGITRRLTVNARVAGPRLGKGVQQVIQAAREGDWTEVDGEVVAGG TPLVAGEYELVLEVAGDRADQALALLPGGGYLLLDTALTPELEAEGLARDVVRNVQDA RKGAGLDVSDRISLVIRLDAAGAEQAERFRDLIARETLAVALRIDADAPADPDPGITV GGGSPLYIEVERA" misc_feature complement(1927297..1929297) /gene="ileS" /locus_tag="CMS_1823" /old_locus_tag="CMS1823" /inference="protein motif:HMMPfam:PF00133" /note="HMMPfam hit to PF00133, Aminoacyl-tRNA synthetase,class Ia, score 6e-179" misc_feature complement(1929169..1929204) /gene="ileS" /locus_tag="CMS_1823" /old_locus_tag="CMS1823" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene complement(1929598..1930545) /locus_tag="CMS_1824" /old_locus_tag="CMS1824" /db_xref="GeneID:6158764" CDS complement(1929598..1930545) /locus_tag="CMS_1824" /old_locus_tag="CMS1824" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121/Cmi2 chimera transposase" /protein_id="YP_001710531.1" /db_xref="GI:170782198" /db_xref="GeneID:6158764" /translation="MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPGRTSRRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYRQP FTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(1929610..1930149) /locus_tag="CMS_1824" /old_locus_tag="CMS1824" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.3e-40" misc_feature complement(1930408..1930473) /locus_tag="CMS_1824" /old_locus_tag="CMS1824" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene 1930770..1931675 /locus_tag="CMS_1825" /old_locus_tag="CMS1825" /db_xref="GeneID:6157567" CDS 1930770..1931675 /locus_tag="CMS_1825" /old_locus_tag="CMS1825" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710532.1" /db_xref="GI:170782199" /db_xref="GeneID:6157567" /translation="MERRAGRVGRPARVSRRLIAEAALEVGLSTLTLTSLAHRLGVDH STLYRHVANHDDIVLLACDTAIARMEWPEVPDSPAAVLTAPDDTSWRTYLEQAVESVW DMYDRHPGLASAIRHLDTAPDQAVLRFTGSIRDLSRMGFAEADAVLVLDLVLDIAVES YVGWERVLAAGGAAADPPASSAPLADALLPAARGRGLLSLAADGIAADQAADADADPE AASRASRRGGPAHSAGAPDAMHAREERAQRDALGTVDRVTARFAGEVSTGSAATPRDW WRRKLGVILASVGSLRSPGPDASDR" misc_feature 1930860..1930925 /locus_tag="CMS_1825" /old_locus_tag="CMS1825" /note="Predicted helix-turn-helix motif with score 2069.000, SD 6.23 at aa 31-52, sequence LTLTSLAHRLGVDHSTLYRHVA" gene complement(1931672..1932343) /locus_tag="CMS_1826" /old_locus_tag="CMS1826" /db_xref="GeneID:6157568" CDS complement(1931672..1932343) /locus_tag="CMS_1826" /old_locus_tag="CMS1826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710533.1" /db_xref="GI:170782200" /db_xref="GeneID:6157568" /translation="MMGTTRGGSMAPRERTTVLLGDSLTGDGGWGGIVPGPDGDADGA RIVDLGRPGQRTDDVLGLLPEAVAADPSTVVVSCGTHDLGSARRGPEETVRGLETILA HLRRDLPAARIVVLSVPPRQREHAERIRVVNVHTRQYARAVRAEHVDLWPALGFGDGE LAPTLTDDRLHLNDDGAAAVRAVLAPVLAARDDEHDDDHDDDGSADADADAGADADAG GPARS" misc_feature complement(1931792..1932295) /locus_tag="CMS_1826" /old_locus_tag="CMS1826" /inference="protein motif:HMMPfam:PF00657" /note="HMMPfam hit to PF00657, Lipolytic enzyme, G-D-S-L,score 8.2e-05" gene complement(1932384..1932833) /locus_tag="CMS_1827" /old_locus_tag="CMS1827" /db_xref="GeneID:6157569" CDS complement(1932384..1932833) /locus_tag="CMS_1827" /old_locus_tag="CMS1827" /codon_start=1 /transl_table=11 /product="putatibe integral membrane protein" /protein_id="YP_001710534.1" /db_xref="GI:170782201" /db_xref="GeneID:6157569" /translation="MSRRIGAPRIGLILLTLVGIALASAGLATAVTMSVSAPVQARAD LAIISGDGSAAGRTPSAKGTPDPAASEAWKPVPVDAADDRGVTDLTDCAASRVTIDVL GIPLNPGQAGALVATILSLPLLIAVAVLVLSPRQRRRWRRVARRQRG" sig_peptide complement(1932384..1932491) /locus_tag="CMS_1827" /old_locus_tag="CMS1827" /note="Signal peptide predicted for CMS1827 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.243 between residues 36 and 37" misc_feature complement(order(1932435..1932503,1932729..1932797)) /locus_tag="CMS_1827" /old_locus_tag="CMS1827" /note="2 probable transmembrane helices predicted for CMS1827 by TMHMM2.0 at aa 13-35 and 111-133" gene complement(1932830..1934320) /locus_tag="CMS_1828" /old_locus_tag="CMS1828" /db_xref="GeneID:6157570" CDS complement(1932830..1934320) /locus_tag="CMS_1828" /old_locus_tag="CMS1828" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710535.1" /db_xref="GI:170782202" /db_xref="GeneID:6157570" /translation="MTGATGYIGGRLVPRLLDAGFRVRVLVRDPRRLTDVPWRDDVEV VQGDLSDAATLVPAVDGVDVLYYLVHGMGSKGDFASSERASAEHVATAAKAAGVGRIV YLGGLHPDTPELSKHLASRKAVGDVLLASGVPTIALQAGVVIGSGSTSFEMIRHLTEV LPFMPAPGWVRNFIQPIAIRDVLYYLVAAADLPDGLNRTFDIGGPDVLRYGQMMNGYA VEAGLPQRPIASIPVFAPRLAAHWVNVVTPIPRSLAVPIIESLQYDCVMGEHDISSYI PDPEGGLTGYRRSVRLALGRMRDGVVETSWKDSAVVGAPSDLLPSDPDWSGHTVYLDL KERSTDAAPEDLWAVIESIGGENGWYSLPVAWAARGWMDKLAGGVGLRRGRRSATTLQ TGDALDFWRVENIERGSSLRLRAEMKVPGEAWLELSSTPREGGGSDYRQRAIFFPSGL AGRLYWFSILPFHGVIFTSMATRITAKALAATKRREAERALEGAAR" gene complement(1934431..1935192) /locus_tag="CMS_1829" /old_locus_tag="CMS1829" /db_xref="GeneID:6157571" CDS complement(1934431..1935192) /locus_tag="CMS_1829" /old_locus_tag="CMS1829" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710536.1" /db_xref="GI:170782203" /db_xref="GeneID:6157571" /translation="MDPDHTPGRPPREASDPRADDVPPSRRGGAPALEHTDAAEARRA SRELDEGMPASVGLEDEHADIRTRFPALPGAFLAEARESTVFLPYEFVFRRLIDLPPL IVWDAVSDADMLSGWLAEASMDAADGGEFWFEWMTVPDRGFASASGGVITRFEEGRAI DFTFLHEDEVSARFLLRLHEVPGGPRDRQTEIVVTVSGFIPTGVATMLKASWRLHLDL LEDLVHGSPVDWATCEVEHGATWRRYLAELESAEG" gene 1935206..1936312 /locus_tag="CMS_1830" /old_locus_tag="CMS1830" /db_xref="GeneID:6157572" CDS 1935206..1936312 /locus_tag="CMS_1830" /old_locus_tag="CMS1830" /codon_start=1 /transl_table=11 /product="putative sugar kinase" /protein_id="YP_001710537.1" /db_xref="GI:170782204" /db_xref="GeneID:6157572" /translation="MPTAGRVSEFHTGDTVICVEATRTTDGGPRVPRTARPPPVSWTP VDGRIRDRDRTKMPRTLALAIDFGGTKVESALVDDAGRVLEGSRFRGPTGPERSADEL LDAVLGVARQALAALPDDAELVGTGLAAAGPVDVPHGLVSPLNVPAWRDYPLRDRVAE LTPGVPTTLQMDGLAITLAEHWVGAGRGHDHMMGMIVSTGIGGGLVLGGRTAAGSTGN AGHIGHVEVAGFDDPCTCGGQGCVEAIASGPKSVAWARAQGWTGSTGEDLAASYRDGD ETAVAAVRRAGLAIGRAIASASSLVDLDVVAIGGGFSRVTPDLFDMIREPIALRQQFG FVTKTRVVPSGLSADGPIIGAGALVHRREMVPSF" misc_feature 1935395..1935961 /locus_tag="CMS_1830" /old_locus_tag="CMS1830" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 2e-34" misc_feature 1935794..1935877 /locus_tag="CMS_1830" /old_locus_tag="CMS1830" /note="PS01125 ROK family signature." gene complement(1936331..1937596) /locus_tag="CMS_1831" /old_locus_tag="CMS1831" /db_xref="GeneID:6157573" CDS complement(1936331..1937596) /locus_tag="CMS_1831" /old_locus_tag="CMS1831" /codon_start=1 /transl_table=11 /product="putative integral membrane transporter" /protein_id="YP_001710538.1" /db_xref="GI:170782205" /db_xref="GeneID:6157573" /translation="MVTTTPAAPRAGALLALVGIVLVALNLRTAVAVFSPIVDEIGRD VPLDSVSIGVLGALPPVCFALFGLLAPAISRRLGLELTVVVGLVAMVVGHLLRAGSDT VVVFGLGTILSLAGMGLGNVLLPPLVKKYFPGRIGPLTSLTTVMMSISTGVPSLVAAP LADGAGWRVAIGAWAAVAVVALVPWVALLVQHRRDTRRERAAAAALDQVDEVPAAITG RVFRSPVAWALVGIQAASSFNAYAMFAWLPALLQDTAGQPPVASGALLAVFGFMGLPA AIIMPILAARMRNVGILIQVGVLFFVVGYVGLLVAPAAAPLLWVAAAGSGPLLFPLVF VLINLRTRTHGGVVALSGFVQGIGYSVGAIGPLMFGVLHEITDSWTAPLLMLFAMVAV ASASGFYLAKPRMLEDTWDRAPREAVRER" sig_peptide complement(1936331..1936426) /locus_tag="CMS_1831" /old_locus_tag="CMS1831" /note="Signal peptide predicted for CMS1831 by SignalP 2.0 HMM (Signal peptide probability 0.978) with cleavage site probability 0.427 between residues 32 and 33" misc_feature complement(order(1936397..1936465,1936493..1936561, 1936580..1936648,1936658..1936726,1936745..1936813, 1936856..1936924,1937027..1937095,1937138..1937206, 1937225..1937293,1937303..1937371,1937390..1937449, 1937492..1937560)) /locus_tag="CMS_1831" /old_locus_tag="CMS1831" /note="12 probable transmembrane helices predicted for CMS1831 by TMHMM2.0 at aa 13-35, 50-69, 76-98, 102-124,131-153, 168-190, 225-247, 262-284, 291-313, 317-339,346-368 and 378-400" misc_feature complement(1936475..1937539) /locus_tag="CMS_1831" /old_locus_tag="CMS1831" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 1937631..1938332 /locus_tag="CMS_1832" /old_locus_tag="CMS1832" /db_xref="GeneID:6157574" CDS 1937631..1938332 /locus_tag="CMS_1832" /old_locus_tag="CMS1832" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710539.1" /db_xref="GI:170782206" /db_xref="GeneID:6157574" /translation="MSEISRHLPLSQRASEPEAKVTGVWSDEIADVLDRTADLLASLD AAGWEAASMCEGWTVRDVAGHIVWRVGASNAAMVRTAVGSMRRRPHLNPMHVMDDLSA DEAARSPEEILARIRAIAAHKRAGKGRKRLPELLEVVVHAYDIAHALKADLTLDPRST GAVAVARAAIAPAQIRGVLRARTLRASDAGWSVGHGPAIEATASTLIMYLFGRTPRPE GDATALPEDGADGAA" gene complement(1938363..1939167) /locus_tag="CMS_1833" /old_locus_tag="CMS1833" /pseudo /db_xref="GeneID:6157575" misc_feature complement(1938412..1938807) /locus_tag="CMS_1833" /old_locus_tag="CMS1833" /inference="protein motif:HMMPfam:PF07739" /note="HMMPfam hit to PF07739, , score 3.3e-19" /pseudo misc_feature complement(1939024..1939137) /locus_tag="CMS_1833" /old_locus_tag="CMS1833" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 6.3e-08" /pseudo gene complement(1939157..1939669) /locus_tag="CMS_1834" /old_locus_tag="CMS1834" /db_xref="GeneID:6157576" CDS complement(1939157..1939669) /locus_tag="CMS_1834" /old_locus_tag="CMS1834" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710540.1" /db_xref="GI:170782207" /db_xref="GeneID:6157576" /translation="MSPVPAPGPDAVAPEPFRGIYGMPSFVTIPTTDLAASVNFWTRG LDFFELFSVPTRLVHLRRWAFQDVLLIPTTSAPAQVPALSVSFACVLDQIHAIADACR ALDPSAVGEPRDTPWGTRDVEVITPERARVVLTAAKPFDPASEAARNLEAIGITARGP GVVEDGGRAR" gene complement(1939761..1940693) /gene="ribF" /locus_tag="CMS_1835" /old_locus_tag="CMS1835" /db_xref="GeneID:6157577" CDS complement(1939761..1940693) /gene="ribF" /locus_tag="CMS_1835" /old_locus_tag="CMS1835" /EC_number="2.7.1.26" /codon_start=1 /transl_table=11 /product="riboflavin kinase (FAD synthetase)" /protein_id="YP_001710541.1" /db_xref="GI:170782208" /db_xref="GeneID:6157577" /translation="MLVVHDPADVPGGFGPSAVTIGKFDGVHAGHRAVIRRLLGIAEE EGLSSAVVTFDRHPAALLAPAARPQSLVSNRQKIELLAELGVDATLMLPFDERLQRLS PEEFVRTVLVDALRARVVLVGEDFRFGAQGAGDAATLTRLGEVHGFRTVVVGDVMPDG SRKVSSTWIRDLMDRGDVEAAAELLGRAPAVRGVVVHGEKRGRELGFPTANLSPEAEG LIPADGVYAGWLRDGDRTYPSAISVGTNPTFAGVRPRVVEAFVLDQTLDLYDHEVEVV FVARIRGMVAYEGREPLIAQMTDDVVRTRALLGA" misc_feature complement(1939767..1940144) /gene="ribF" /locus_tag="CMS_1835" /old_locus_tag="CMS1835" /inference="protein motif:HMMPfam:PF01687" /note="HMMPfam hit to PF01687, Riboflavin kinase / FAD synthetase, score 2.7e-41" misc_feature complement(1940190..1940651) /gene="ribF" /locus_tag="CMS_1835" /old_locus_tag="CMS1835" /inference="protein motif:HMMPfam:PF06574" /note="HMMPfam hit to PF06574, Riboflavin kinase / FAD synthetase, score 1.2e-69" gene complement(1940696..1941157) /locus_tag="CMS_1836" /old_locus_tag="CMS1836" /db_xref="GeneID:6158934" CDS complement(1940696..1941157) /locus_tag="CMS_1836" /old_locus_tag="CMS1836" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710542.1" /db_xref="GI:170782209" /db_xref="GeneID:6158934" /translation="MTDSRTSRMTGLGRVLVFFYGLLALAATGRSVTQILTKYDEAPV AYTLSALAAVVYIVATVALVAPARTPEAARRWYRIAFATIAFELVGVLVVGTLSLIDA QLFPHDSVWSGYGYGYGVIPLVLPVLGLLWLRRGGRSRVSAVDERPVRGDR" sig_peptide complement(1940696..1940773) /locus_tag="CMS_1836" /old_locus_tag="CMS1836" /note="Signal peptide predicted for CMS1836 by SignalP 2.0 HMM (Signal peptide probability 0.781) with cleavage site probability 0.457 between residues 26 and 27" misc_feature complement(order(1940762..1940830,1940858..1940926, 1940960..1941028,1941071..1941124)) /locus_tag="CMS_1836" /old_locus_tag="CMS1836" /note="4 probable transmembrane helices predicted for CMS1836 by TMHMM2.0 at aa 12-29, 44-66, 78-100 and 110-132" gene complement(1941196..1941564) /locus_tag="CMS_1837" /old_locus_tag="CMS1837" /db_xref="GeneID:6157578" CDS complement(1941196..1941564) /locus_tag="CMS_1837" /old_locus_tag="CMS1837" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710543.1" /db_xref="GI:170782210" /db_xref="GeneID:6157578" /translation="MIGWFTVAQIAVAVVAGVLCLVLGAVGRKPSDLSMGPTALVEVL LVGQLVVAIVAPAVDNPPSGSLIEYYAYLLSGLLIPPLAMFWALVERTRWSTVILGAS CLAIAIMVYRMDVIWNVQSA" sig_peptide complement(1941196..1941279) /locus_tag="CMS_1837" /old_locus_tag="CMS1837" /note="Signal peptide predicted for CMS1837 by SignalP 2.0 HMM (Signal peptide probability 0.944) with cleavage site probability 0.902 between residues 28 and 29" misc_feature complement(order(1941217..1941285,1941298..1941357, 1941400..1941468,1941487..1941555)) /locus_tag="CMS_1837" /old_locus_tag="CMS1837" /note="4 probable transmembrane helices predicted for CMS1837 by TMHMM2.0 at aa 4-26, 33-55, 70-89 and 94-116" gene complement(1941561..1942520) /gene="truB" /locus_tag="CMS_1838" /old_locus_tag="CMS1838" /db_xref="GeneID:6157579" CDS complement(1941561..1942520) /gene="truB" /locus_tag="CMS_1838" /old_locus_tag="CMS1838" /EC_number="5.4.99.-" /note="catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase B" /protein_id="YP_001710544.1" /db_xref="GI:170782211" /db_xref="GeneID:6157579" /translation="METPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVG HAGTLDPMATGLMILGVNSSTRLLTYLVGLDKEYLATIRLGRATTTDDREGEVVSRAE PGRIRDLAVADVERAIADLRGTISQVPSAVSAIKVDGKRAYARVRAGEEVELAAREVT VSAFDVLRFDAVEAEEGEEDGAQLDLSVRITCSSGTYVRALARDLGRALGVGGHLTAL RRTRVGPFHVDDAVAIDDMVVADRLIPPADAAARLFDVLHLTDQEAVDLGHGKKLTTP DEAPTEDPLAAVAPDGRLVGLVGFRGRTGTSIVNFPADEAGAS" misc_feature complement(1941927..1942418) /gene="truB" /locus_tag="CMS_1838" /old_locus_tag="CMS1838" /inference="protein motif:HMMPfam:PF01509" /note="HMMPfam hit to PF01509, Pseudouridylate synthase TruB, N-terminal, score 8e-50" gene 1942607..1943602 /locus_tag="CMS_1839" /old_locus_tag="CMS1839" /db_xref="GeneID:6159078" CDS 1942607..1943602 /locus_tag="CMS_1839" /old_locus_tag="CMS1839" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710545.1" /db_xref="GI:170782212" /db_xref="GeneID:6159078" /translation="MRIGVLGAGAVGGTIAALLERAGHEVDVTARGPHLRVIQDRGLH LVGGYGDHVARVAAAERLGRPPELAIVATKIADARDAMTENAGWLRGIPVLVVQNGLA AITMGVECLPRSQVVGGLALAAASLTEPGLVTVTSAAGMQIGSADGPAGAGIALVRDV LDPVVPVTVADDFLGAQWTKLVINGINAVPAITGLSVQAVIAEPVLRRIVARAMQETV RTGLARGVTFGRLGGLTHRRLRLFASAPLPLAERLPVSLARNMGQVPNPGSTLQSIRR NRPTEVDHLNGAVSALAPGAGVDAPVNAALAQLVHGLEASGRHVSPAELARLIPR" sig_peptide 1942607..1942672 /locus_tag="CMS_1839" /old_locus_tag="CMS1839" /note="Signal peptide predicted for CMS1839 by SignalP 2.0 HMM (Signal peptide probability 0.725) with cleavage site probability 0.301 between residues 22 and 23" misc_feature 1942739..1943551 /locus_tag="CMS_1839" /old_locus_tag="CMS1839" /inference="protein motif:HMMPfam:PF02558" /note="HMMPfam hit to PF02558, Ketopantoate reductase ApbA/PanE, score 5.7e-08" gene complement(1943661..1944227) /locus_tag="CMS_1840" /old_locus_tag="CMS1840" /db_xref="GeneID:6157580" CDS complement(1943661..1944227) /locus_tag="CMS_1840" /old_locus_tag="CMS1840" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710546.1" /db_xref="GI:170782213" /db_xref="GeneID:6157580" /translation="MSLYRASRAEVLSSLADEFLHNYGRGRAFLAVDGGPLADPVAFA RDLADVLRADGHGAYVAAAADSAPDGGAPDAAALRDRLVRPFRRAGTPFALRPDGDAV TDAPDDAVLIVAGDALQTAELRGLWNAVVYLLLPDEPLATSGGDAGSAAQEAHARYIR AVNPRRAATMIVDVTHPDLPRRVFADSC" gene 1944293..1945144 /gene="mutY" /locus_tag="CMS_1841" /old_locus_tag="CMS1841" /db_xref="GeneID:6157581" CDS 1944293..1945144 /gene="mutY" /locus_tag="CMS_1841" /old_locus_tag="CMS1841" /EC_number="3.2.2.-" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase" /protein_id="YP_001710547.1" /db_xref="GI:170782214" /db_xref="GeneID:6157581" /translation="MNAWFRENARDLPWRREGFGSWGILVSEFMLQQTPVVRVIPRLE EWLARWPVPAALASTPASEAVRAWGRLGYPRRALNLHACAVAIVERHGGEVPEDVDAL LDLPGIGPYTARAVAALAFGHRHPVVDVNVRRVLARAVAGQGDPGPARTTVDLAAMEA QLPDDVAEARVFNAGAMELGAVVCTARAPRCDDCPIRDLCAWRAAGYPAYDGSARVTQ KRYEGSDRQVRGLLLAELRSSHSPVSAADLATAWPEPVQRGRALGGLIADGLAVRQPD GTYALPS" misc_feature 1944368..1944775 /gene="mutY" /locus_tag="CMS_1841" /old_locus_tag="CMS1841" /inference="protein motif:HMMPfam:PF00730" /note="HMMPfam hit to PF00730, HhH-GPD, score 1.2e-13" misc_feature 1944560..1944649 /gene="mutY" /locus_tag="CMS_1841" /old_locus_tag="CMS1841" /inference="protein motif:HMMPfam:PF00633" /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 9e-07" gene complement(1945190..1945702) /gene="rbfA" /locus_tag="CMS_1842" /old_locus_tag="CMS1842" /db_xref="GeneID:6158835" CDS complement(1945190..1945702) /gene="rbfA" /locus_tag="CMS_1842" /old_locus_tag="CMS1842" /note="associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="YP_001710548.1" /db_xref="GI:170782215" /db_xref="GeneID:6158835" /translation="MVDHARARKMADRIKEIVARKLDRGIKDPRLGFVTVTDVRVTGD LQHASIFYTVYGTDEERADTAAALKSATGMLRSEVGKNITARLTPSLEFILDGVPENA AAIDALLEEARRRDADVQAQAKAGVYAGDEDPYVKPRVIGEDEDDDDEEGDEDGDDVD RSAPGYEPAH" misc_feature complement(1945376..1945687) /gene="rbfA" /locus_tag="CMS_1842" /old_locus_tag="CMS1842" /inference="protein motif:HMMPfam:PF02033" /note="HMMPfam hit to PF02033, Ribosome-binding factor A,score 9.3e-44" gene complement(1946034..1948868) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /db_xref="GeneID:6158920" CDS complement(1946034..1948868) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /note="Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="YP_001710549.1" /db_xref="GI:170782216" /db_xref="GeneID:6158920" /translation="MAKPRVHEIAAEIGVDSKTALAKLKEMGEFVKGPSSSIEPPVAR KLKAALEAAGVTGQAAAPAAAASSAPRPGARSSAPKPGGRPTPGPQPTAAPEVEAPEA SDVPVPAKPLTVAERQAQAEASRKAAAEEKAQAEKSAASATPEAPAVETPSAPRPDAG STPAPSNGIPRPGIPRPAAPRPGNNPFASNQGMGTKPRPGNNPFASNQGMGQRPAAGA AGPRPAAPRPGSPRPGAPRPGGVGQGARPAGFGQRPAGAGRPGGAPGGAGRPGAPAAG GFQRPAGGFAGRPGGGGRGRGPGGGTAGAFGRGGGKSKSRKSKRTKRAEFELREAPSL GGVSVPRGDGNTVVRLRRGASISDFADKIDASPGNLVTVLFHLGEMATATESLDEATF EVLGTELGYKIQVVSPEDEDRELLEGFDIDLDQELEDEDDDVLEIRPPVVTVMGHVDH GKTRLLDAIRNANVIEGEAGGITQHIGAYQVWAPHEGYERAITFIDTPGHEAFTAMRT RGAQVTDIAILVVAADDGIMPQTVEALNHAQAANVPIVVAVNKVDKEGANPAKVRQQL TEYGLVAEEYGGDVMFVDVSALTGKGVEDLLEAVLLTADAGLDLRSNPNKDARGVAIE ARLDKGRGAVATVLIQSGTLRVGDAIVAGTAYGRVRAMMDENGDAVHEAYPSRPVQVQ GLSSVPGAGDTFLVTEEDRTARQIAEKREAVERNAQLAKARKRISLEDFTRALEEGKV ESLNLIIKGDVSGAVEALEESLMKIEVDDSVQLRIIHRGVGAVTESDVNLATIDNAII IGFNVRPDPKARARAAREGVDIRFYSVIYSALEEIESSLTGMLKPEFEEVQSGVAEIR EVFRSSKFGNIAGVIVRSGTITRNAKARVIRDGVVVGDSLAIESLRRFKDDVSEVRTD FEAGIGLGKFNDIQIGDEIETIEMKEKPRG" misc_feature complement(1946784..1946975) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 1.5e-12" misc_feature complement(1947045..1947560) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 1.9e-49" misc_feature complement(1947510..1947533) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(1947663..1947818) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /inference="protein motif:HMMPfam:PF04760" /note="HMMPfam hit to PF04760, Translation initiation factor IF-2, N-terminal, score 1.2e-08" misc_feature complement(1948710..1948868) /gene="infB" /locus_tag="CMS_1843" /old_locus_tag="CMS1843" /inference="protein motif:HMMPfam:PF04760" /note="HMMPfam hit to PF04760, Translation initiation factor IF-2, N-terminal, score 7.3e-07" gene complement(1949309..1950316) /gene="nusA" /locus_tag="CMS_1844" /old_locus_tag="CMS1844" /db_xref="GeneID:6158771" CDS complement(1949309..1950316) /gene="nusA" /locus_tag="CMS_1844" /old_locus_tag="CMS1844" /note="modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /protein_id="YP_001710550.1" /db_xref="GI:170782217" /db_xref="GeneID:6158771" /translation="MDIDLSVLRLMEREREIPFEELVSIIEQAILTAYLKHTDQADAK PVADGVPPARVHLDRKSGHVSVHVPELDEDGLVIGESEDSPSDFGRIAAFAARQVINQ RLRDIGDDRILGEFKGREGDIVAGVIQQGPNPRMIHVDLGTIEAILPPEEQVPGEKYV HGSRLRVYVTSVSRGAKGPQITVSRTHPSLVRKLFALEVPEIASGLVEIVSLAREAGH RTKIAVRATEPGINAKGACIGELGQRVRAVTAELNDEKIDIVDYSESLPVFVGNALSP ARVTSSFVIDQATKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSILEGD D" gene complement(1950402..1952174) /gene="proS" /locus_tag="CMS_1845" /old_locus_tag="CMS1845" /db_xref="GeneID:6158843" CDS complement(1950402..1952174) /gene="proS" /locus_tag="CMS_1845" /old_locus_tag="CMS1845" /EC_number="6.1.1.15" /note="catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="YP_001710551.1" /db_xref="GI:170782218" /db_xref="GeneID:6158843" /translation="MSTRLSKLFVRTLREDPVDAEVASHRLLVRAGYIRRQAPGIFAW LPLGLRVKNKVEAIVREEMERIGAQEVHFPALLPAEPYQATGRYDEYGPGMFRLEDRK RAPMVLAPTHEEFFALLVKDLYSSYKDLPLSIYQIQDKYRDEARPRAGILRGREFTMK DAYSFDHTDAGLAVSYQAQRDAYERIFQRLGLEYVIVAADAGAMGGSKSEEFLHPTPI GEDTFVRSPGGYAANVEAFTTLVPESIPIEGQPAARVFDSPDTPTIQTLVDLANAREP REDGRAWTAADTLKNIVLALTHLDGTRELVVVGIPGDRDIDLKRAEVAFFPAEVEAAN DGDLAKNPGLVKGYIGPWSPEGPVLGSTSSTKVRYVVDPRVVDGSSWITGANVAGKHV LSLVAGRDFTPDGVVEAADVRDGDPAPDGSGPISTARGTEIGHVFELGRKYAEALGLK VLDENGKLVTVTMGSYGIGITRNLALVAEATQDGRGLLWPASISPFDVHVVMTGKDPA VGTAAEELVDALDAAGLDVLFDDRPKVSPGVKFGDAELIGVPTVVIVGRGAVDGMAEL WDRRTNERTPVALADVAGALTAAR" misc_feature complement(1950408..1950686) /gene="proS" /locus_tag="CMS_1845" /old_locus_tag="CMS1845" /inference="protein motif:HMMPfam:PF03129" /note="HMMPfam hit to PF03129, Anticodon-binding, score 4.7e-13" misc_feature complement(1951593..1952057) /gene="proS" /locus_tag="CMS_1845" /old_locus_tag="CMS1845" /inference="protein motif:HMMPfam:PF00587" /note="HMMPfam hit to PF00587, tRNA synthetases, class-II (G, H, P and S), score 2.9e-50" misc_feature complement(1951692..1951754) /gene="proS" /locus_tag="CMS_1845" /old_locus_tag="CMS1845" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." gene complement(1952206..1953219) /locus_tag="CMS_1846" /old_locus_tag="CMS1846" /db_xref="GeneID:6158885" CDS complement(1952206..1953219) /locus_tag="CMS_1846" /old_locus_tag="CMS1846" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710552.1" /db_xref="GI:170782219" /db_xref="GeneID:6158885" /translation="MIVLVTGASGMLGRAVAERLAAAGHAVRTFQRQPSGLASSGTDP VPGSVVDLRGSVTDPAAVLRAVAGVDAVVHLAAKVSLAGDPADFRAVNVEGTRGLLQA ARAAGVTRFVHVSSPSVAHTGLSITGDGAGPADPVRARGDYARTKAEGELIALASDDP AMRVLAVRPHLVWGPGDTQLVARIVDRASRGRLPLLGHGAALIDTVYRDNAADAIVAA LDAADTAHGRAYVVTNGEPRPVAELLAGMCRAAGVPAPRIRVPAALARAAGGAVERVW AVRPGSDEPPMTRFLAEQLSTAHWFDQRETRRALGWTPAVSLDEGFARLRLAYAAERP AAR" misc_feature complement(1952218..1953219) /locus_tag="CMS_1846" /old_locus_tag="CMS1846" /inference="protein motif:HMMPfam:PF01073" /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid dehydrogenase/isomerase, score 2.9e-30" misc_feature complement(1952386..1952415) /locus_tag="CMS_1846" /old_locus_tag="CMS1846" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." gene complement(1953216..1955858) /locus_tag="CMS_1847" /old_locus_tag="CMS1847" /db_xref="GeneID:6157582" CDS complement(1953216..1955858) /locus_tag="CMS_1847" /old_locus_tag="CMS1847" /codon_start=1 /transl_table=11 /product="putative AMP-dependent synthetase/ligase" /protein_id="YP_001710553.1" /db_xref="GI:170782220" /db_xref="GeneID:6157582" /translation="MAGPDGQPLPGLHPAWSRVVRAGGHGWHLLDTGERLAATGAPVA GTILCVHGNPTWSYLWRRIAAESLARAERDPSRPAWRVVAVDQLDMGFSERTGVARTL PTRLADLQALTDELGLSGSGATGPVVTLGHDWGGVVSLGWALRNRDVLAGVMALNTAV HQEEGVPIPWPLRLALATGIHDAATRGTPGFLATTLALAHPPLDPTVRRAFAAPYRGA SRRAGIRGFVADIPVGPAHPSHATLTSIAEGLRDLDLPALFVWGPRDPIFSDVYLSDL LERLPHADVHRVEGAGHLVTEDHDYASAALDWLADRVAPGSAPAAAAPAVPAVADAAP VRSLGALLEELRDSDDPVLVEMAPRGGGSPRTVSWRLLSRRVREIAAGLHARGLRAGD RVSLLVPPGADLTALLYACLRIGAIVVVADAGLGAKGLGRAVAGSRPDMVVGIPAGLA LARALGWPGERISVTTLAPPVARALGVAASLPEIARDGRAQVLPPEPAADDDAAILFT SGSTGPAKGVVYTHRQLAALRDMLGGRFDVGVGTGLVAGFAPFALLGPALGATSVTPD MDVTRPHDLTASALAAAARAADATVVFASPAALANVVATEDALTSDDRAALGRVRSLL SAGAPLSEALLTRAAALVPAAEVHTPYGMTEGLLLTDVTLEGIRQAALRGDAGVCVGA PVDPVAIRISPLDADGAATGALTAEPGVTGEIVAAAPHVHDRYDRLHVTDRAARRDSD DGIRRHRTGDVGHLDATGALWVEGRLPHVITTADGVLTPVGPEQRAESAPGVGRAAAV GVGPAGVQQLVLVVETVPTARRVGLADPDLATAVRAAVGHPVAAVIVVPVLPTDVRHN SKVDRARLGRWAAGILSGGRVSAP" misc_feature complement(1953468..1954757) /locus_tag="CMS_1847" /old_locus_tag="CMS1847" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 1.2e-35" misc_feature complement(1954311..1954346) /locus_tag="CMS_1847" /old_locus_tag="CMS1847" /note="PS00455 Putative AMP-binding domain signature." misc_feature complement(1954932..1955621) /locus_tag="CMS_1847" /old_locus_tag="CMS1847" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1.2e-09" gene complement(1955905..1956936) /gene="fabH" /locus_tag="CMS_1848" /old_locus_tag="CMS1848" /db_xref="GeneID:6157583" CDS complement(1955905..1956936) /gene="fabH" /locus_tag="CMS_1848" /old_locus_tag="CMS1848" /note="FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase III" /protein_id="YP_001710554.1" /db_xref="GI:170782221" /db_xref="GeneID:6157583" /translation="MLLNGNATFRHRNTSLLGLASVLAPHTVTSVEIDDRLKPVLSRL RLPTGLLQRVAGVLERRNWDASMSFDAAATEAGRKALAQAGIEPSQIGLLINTSVTRA HLEPSVAVSIHNGLGLPSSALNFDIANACLGFVNAMTLAGHLIDSGQIDYAMIVDGED AGEIRHNTVARLLRPETTRADFLSEFPSLTLGAGAAAAVLGRTSDHPEGHRILGGVTR AATQHHELCIGDVDGMFTDTKELLRGGMELVVDAWKEAAQDDWEWSDMDRYILHQVSD VHTSAIVKAAKLDKSRVPLTYPRYGNVGPASIPITLADQADSLSRGDRVLCMGVGSGL NTAMTEILW" sig_peptide complement(1955905..1955997) /gene="fabH" /locus_tag="CMS_1848" /old_locus_tag="CMS1848" /note="Signal peptide predicted for CMS1848 by SignalP 2.0 HMM (Signal peptide probability 0.864) with cleavage site probability 0.578 between residues 31 and 32" gene complement(1957043..1958188) /gene="ispG" /locus_tag="CMS_1849" /old_locus_tag="CMS1849" /db_xref="GeneID:6158681" CDS complement(1957043..1958188) /gene="ispG" /locus_tag="CMS_1849" /old_locus_tag="CMS1849" /EC_number="1.17.7.1" /note="catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /protein_id="YP_001710555.1" /db_xref="GI:170782222" /db_xref="GeneID:6158681" /translation="MPAVNLGMPKVPEVLAPRRKTRQISVGKVKVGGNAQVSVQSMTT TQTTNINATLQQIAELTATGCDIVRVAVPHQDDADVLHILAKKSQIPIIADIHFQPRY VFTAIDAGVGAVRVNPGNIRKFDDQVGAIAKAAKAAGTSIRIGVNAGSLHPSLLQKYG KATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVIMVKAYRLLAERGDWPLHLGVT EAGPAFQGTIKSATAFGILLSEGIGDTIRVSLSAPPAEEVKVGLQILQSLNLRERKLE IVSCPSCGRAQVDVYSLAEQVTEGLKHVNVPLRVAVMGCVVNGPGEAREAELGVASGN GRGQIFVKGEVIKTVPESEIVQTLIEEANRLAAEMPAGSIGSPEILV" misc_feature complement(1957079..1958137) /gene="ispG" /locus_tag="CMS_1849" /old_locus_tag="CMS1849" /inference="protein motif:HMMPfam:PF04551" /note="HMMPfam hit to PF04551, IspG protein, score 4.1e-229" gene complement(1958284..1959732) /locus_tag="CMS_1850" /old_locus_tag="CMS1850" /db_xref="GeneID:6158775" CDS complement(1958284..1959732) /locus_tag="CMS_1850" /old_locus_tag="CMS1850" /codon_start=1 /transl_table=11 /product="putative metalloprotease" /protein_id="YP_001710556.1" /db_xref="GI:170782223" /db_xref="GeneID:6158775" /translation="MREVASPTMDGVFLYILGVLIIVVGVAVSIGLHEVGHLVPAKLF GVRVTQYMIGFGPTIFSRRKGETEYGVKAIPLGGYISMIGMFPPQSSRAGTSSTGIAQ LVGPDSRRGAADAGSPAAPDADDRAGRGFFDLLVQDARQASAESVGDEEDRAFYKLSV PKRMVIMLGGPAMNFLLAILLFAVVLCGFGVTTPTTTVGQVNACIVPAGSTASADAAT CPAGAPEAPGAAAGLQPGDTIVSIDGSPVTAWDQVTSTVQASAGKELDVVVERDGAQQ TLAITPVLSEQAVPGSRGAPEVDEQGNPVTREVGLIGFSPTQAVQQQPLSAAFTTTGE NMAAVGNLILNLPQRLVDVGRAAFGGGERDPNGPMSVVGVGRVAGEIASLDETPVASR ASAMIGLVASLNVALGMINLLPLLPLDGGHVLGAIVEGVRRFFARLFGRRDPGPVDVA KLMPLTFVVVIVFGAMSALLIFADLVNPVRLT" misc_feature complement(order(1958305..1958373,1958479..1958547, 1959175..1959243,1959628..1959696)) /locus_tag="CMS_1850" /old_locus_tag="CMS1850" /note="4 probable transmembrane helices predicted for CMS1850 by TMHMM2.0 at aa 13-35, 164-186, 396-418 and 454-476" misc_feature complement(1958311..1959672) /locus_tag="CMS_1850" /old_locus_tag="CMS1850" /inference="protein motif:HMMPfam:PF02163" /note="HMMPfam hit to PF02163, Peptidase M50, score 4.3e-43" misc_feature complement(1959616..1959645) /locus_tag="CMS_1850" /old_locus_tag="CMS1850" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene 1959828..1961093 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /db_xref="GeneID:6157584" CDS 1959828..1961093 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /codon_start=1 /transl_table=11 /product="serine/threonine-protein kinase" /protein_id="YP_001710557.1" /db_xref="GI:170782224" /db_xref="GeneID:6157584" /translation="MTRGAPMPGERPDPLAGTLLAGRYRISGLLGRGGMATVYRAADE ILGREVAVKVFATDSADPGEVERQEGEVRMLAGLSHPGLVTLFDVGDDVVGDRVLAFI VMEIVDGTTLADRMKEGPLPGPEVARIGGILADALGYIHRRGVVHRDVKPANVLLAQA EDDEPAVAKLTDFGIARLVDGTRLTSTGSIIGTVSYLSPEQALGEEVGAPTDVYALGL VLLECLTGRRTFPGTAAESTMARVVRDPEIPARLGASWVDLLSRMTRRDPETRPTARE VAAELRTGRAPASAVGEPTATSTRVMPAAAAAAGYGAAAAAPAADPDARTERFAAAPT TPAPRGEDPTARTSPSGARPPADRAPAKRRGSRALSIAVVSVLIAAAAVVGVVTVNAM QTHDTSYPSVPGPLGASLEELQKSVEDAP" misc_feature 1959897..1960670 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 1.8e-51" misc_feature 1959915..1959986 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /note="PS00107 Protein kinases ATP-binding region signature." misc_feature 1960260..1960298 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /note="PS00108 Serine/Threonine protein kinases active-site signature." misc_feature 1960929..1960997 /locus_tag="CMS_1851" /old_locus_tag="CMS1851" /note="1 probable transmembrane helix predicted for CMS1851 by TMHMM2.0 at aa 368-390" gene 1961138..1961767 /locus_tag="CMS_1852" /old_locus_tag="CMS1852" /db_xref="GeneID:6157585" CDS 1961138..1961767 /locus_tag="CMS_1852" /old_locus_tag="CMS1852" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710558.1" /db_xref="GI:170782225" /db_xref="GeneID:6157585" /translation="MTPDRRSLRGRAVVGLAAATTAVLLLAGCAGSSTPEDRALDDLQ QRTQSVTRSSADGDYAKALAQLEELRAAVEADLADGSIDQARRDEIIARIDAVRAQLE AARDAAKATPTPTPSPSTSPSPSPTPSRTPTPSPTPSPTRTATPPAPATPSPAPGDDG GGSGGNGGGNGNGGGGGNGNGIGNGNGNGNGNGNGNGGAGNPGNGNGDG" sig_peptide 1961138..1961233 /locus_tag="CMS_1852" /old_locus_tag="CMS1852" /note="Signal peptide predicted for CMS1852 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.808 between residues 48 and 49" misc_feature 1961171..1961239 /locus_tag="CMS_1852" /old_locus_tag="CMS1852" /note="1 probable transmembrane helix predicted for CMS1852 by TMHMM2.0 at aa 28-50" gene complement(1961965..1963047) /gene="dxr" /locus_tag="CMS_1853" /old_locus_tag="CMS1853" /db_xref="GeneID:6157586" CDS complement(1961965..1963047) /gene="dxr" /locus_tag="CMS_1853" /old_locus_tag="CMS1853" /EC_number="1.1.1.267" /note="catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="YP_001710559.1" /db_xref="GI:170782226" /db_xref="GeneID:6157586" /translation="MRRVIVLGSTGSIGVQALEVVARHPELFEVVGLGAGTQREALAE QARAAGVEHTALGADEAEQLIRSVDADVVLNGITGSVGLGPTLAALEEGRTLALANKE SLIVGGELVRGLAAPGQLVPVDSEHSAIAQALRGGTAEEVRRLVVTASGGPFRGRSRA ELEHVTPREALAHPTWDMGLVITTNSSTLVNKGLEVIEAHLLFDVPYERIDVVVHPQS LVHSMVEFIDGSTLAQASPPDMRLPIALGLNWPHRMHDVGVPIDWTRAATWTFEPLDD EAFPAVLLAKQVGTAGSTYPAVYNAANEQAVQAFHAGRAGFLDIVDTIRRVVDAHEPA SGPLTRESLAEAERWTRAEADRVLGV" sig_peptide complement(1961965..1962030) /gene="dxr" /locus_tag="CMS_1853" /old_locus_tag="CMS1853" /note="Signal peptide predicted for CMS1853 by SignalP 2.0 HMM (Signal peptide probability 0.692) with cleavage site probability 0.574 between residues 22 and 23" misc_feature complement(1961986..1963038) /gene="dxr" /locus_tag="CMS_1853" /old_locus_tag="CMS1853" /inference="protein motif:HMMPfam:PF02670" /note="HMMPfam hit to PF02670, 1-deoxy-D-xylulose 5-phosphate reductoisomerase, score 1.2e-160" misc_feature complement(1962721..1963047) /gene="dxr" /locus_tag="CMS_1853" /old_locus_tag="CMS1853" /note="PS00430 TonB-dependent receptor proteins signature 1." gene complement(1963056..1964078) /locus_tag="CMS_1854" /old_locus_tag="CMS1854" /db_xref="GeneID:6158673" CDS complement(1963056..1964078) /locus_tag="CMS_1854" /old_locus_tag="CMS1854" /codon_start=1 /transl_table=11 /product="putative secreted peptidyl-prolyl cis-trans isomerase" /protein_id="YP_001710560.1" /db_xref="GI:170782227" /db_xref="GeneID:6158673" /translation="MKATHVKRRIPLTLAAAAVLALSACSGSGTPNADPSASPTAGAR TAGASCIDTPSGDASKSVKVSGDFGKAPEVTVDAPLTVDTTERTVVTEGDGAEIAAGA TANIALAAYNGKTGEAISQLAYNADSPLPATMNDGALVPGVVRAVECTTVGSRIVAVV PAADGFAAEQATTLGLGADDPIVIVVDVLSQAATRADGVDQPAPEGFPAVTLADNGAP TITIPDAAPPTETKIANLKVGDGAEVTDGASVTVQYTGINWNTKKVFDSSWDRGQSAT FVTSQVIPGFTKALVGQKVGSQVIAIIPPADGYGEKGSGEDIGGSDTIVFVVDILGTQ PAAAGQ" sig_peptide complement(1963056..1963184) /locus_tag="CMS_1854" /old_locus_tag="CMS1854" /note="Signal peptide predicted for CMS1854 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.817 between residues 43 and 44" misc_feature complement(1963086..1963364) /locus_tag="CMS_1854" /old_locus_tag="CMS1854" /inference="protein motif:HMMPfam:PF00254" /note="HMMPfam hit to PF00254, Peptidylprolyl isomerase,FKBP-type, score 5.7e-30" misc_feature complement(1964004..1964036) /locus_tag="CMS_1854" /old_locus_tag="CMS1854" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 1964344..1965306 /locus_tag="CMS_1855" /old_locus_tag="CMS1855" /db_xref="GeneID:6157587" CDS 1964344..1965306 /locus_tag="CMS_1855" /old_locus_tag="CMS1855" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710561.1" /db_xref="GI:170782228" /db_xref="GeneID:6157587" /translation="MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 1964416..1964481 /locus_tag="CMS_1855" /old_locus_tag="CMS1855" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 1964740..1965282 /locus_tag="CMS_1855" /old_locus_tag="CMS1855" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.3e-41" gene complement(1965303..1965953) /locus_tag="CMS_1857" /old_locus_tag="CMS1857" /pseudo /db_xref="GeneID:6157588" misc_feature complement(1965813..1965878) /locus_tag="CMS_1857" /old_locus_tag="CMS1857" /note="Predicted helix-turn-helix motif with score 1631.000, SD 4.74 at aa 26-47, sequence WSLDVLAARCFLSPSTLSRIET" /pseudo gene 1965995..1966849 /locus_tag="CMS_1858" /old_locus_tag="CMS1858" /db_xref="GeneID:6157589" CDS 1965995..1966849 /locus_tag="CMS_1858" /old_locus_tag="CMS1858" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="YP_001710562.1" /db_xref="GI:170782229" /db_xref="GeneID:6157589" /translation="MPHHHPHGTADPSLARMLDLDARILHRHQRELTAWIRRLARDTP GRVVVDLGAGTGTGTVALARSFGRAEVHAVDASAAMLDRVAERAVVDGLADRIRTVQA DLDAGWPALPPADLVWASLMLHEVADPARLLARVHDGLAPGGILAVVEMDGPPRFPPD RLDPALGRPGLADRLDDAVTHGGTGGPSHPDWTPWLRDAGLVDVVTRTFSIDPDPADP IAAAATLPYARAWLARVRDRSADRLDADDRAVLDALLDDDGPHALARIPGLGLRRTRT AYVGRRLR" gene complement(1966875..1967603) /locus_tag="CMS_1859" /old_locus_tag="CMS1859" /db_xref="GeneID:6157590" CDS complement(1966875..1967603) /locus_tag="CMS_1859" /old_locus_tag="CMS1859" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710563.1" /db_xref="GI:170782230" /db_xref="GeneID:6157590" /translation="MPAAAVAAGAIAPDVPLFLPGGLSYAQTHGFPSLLVTALPVAAV MLAVWLVLLRPAAGALLPASVGSRLPSAWTLRPRPTWRGTLLALAALLLGVLTHVAWD AFTHEGRLGSAILPVLAEPWGALPGFRWIQYASSVGGLVVLGVAAVRWFRRATPGPVP RPGRAPAERTLRRALAAALLAVVVLSVLVPVAMDGVPRDLDALRGIVFVAITRGGAAM AAAVLLAALAVPVIRRGARSSSAG" misc_feature complement(order(1966920..1966988,1967016..1967084, 1967151..1967219,1967289..1967357,1967445..1967513)) /locus_tag="CMS_1859" /old_locus_tag="CMS1859" /note="5 probable transmembrane helices predicted for CMS1859 by TMHMM2.0 at aa 31-53, 83-105, 129-151, 174-196 and 206-228" gene 1967798..1969555 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /db_xref="GeneID:6157591" CDS 1967798..1969555 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /codon_start=1 /transl_table=11 /product="cold-shock DEAD-box RNA helicase" /protein_id="YP_001710564.1" /db_xref="GI:170782231" /db_xref="GeneID:6157591" /translation="MSTDETASPSETDAPRTTFSDLGLSDQVLKALKDVGYETPSAIQ AATIPSLLSGRDVLGVAQTGTGKTAAFALPILSNLDVAQKTPQALVLAPTRELALQVC EAFERYASGMRGVHVLPVYGGQGYGVQLSALRRGVHVVVGTPGRIMDHLDKGTLDLSQ LKFLVLDEADEMLKMGFAEDVETILADTPKSKQIALFSATMPAQIRRISGKYLQDPEE ITVKNKTTTSANTTQRYLMVSYPQKVDALTRILETENFEGMIVFVRTKNETETLAEKL RARGYAAAAISGDVAQAQRERTVEQLKNGKLDILVATDVAARGLDVDRISHVVNYDIP IDTESYVHRIGRTGRAGRSGAAISFVTPRERRLLTAIEKATRQPLTEMRMPSAEDVNV TRLSRFDDAITAALADRERLDAFRDIVGHYVNHHDVVESDVAAALAIVAQGDTPLLLS ADDLRPPRVERERRDDRPGRDGDDRGERRARPARGSGNMATYRIDVGRRHRVEPRQIV GALANEGGFSREDFGHIDIRPDFSLVELPAATSDDQLRKLANTLINGRPIDIRPDRGG PRAAERGAAPERRGRKPRD" misc_feature 1967915..1968421 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 2.9e-70" misc_feature 1967978..1968001 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1968290..1968316 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /note="PS00039 DEAD-box subfamily ATP-dependent helicases signature." misc_feature 1968620..1968850 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 7.7e-34" misc_feature 1969229..1969489 /gene="deaD" /locus_tag="CMS_1860" /old_locus_tag="CMS1860" /inference="protein motif:HMMPfam:PF03880" /note="HMMPfam hit to PF03880, DbpA, RNA-binding, score 7.6e-33" misc_feature 1969583..1972228 /note="submitted with no further information" gene 1969726..1971018 /locus_tag="CMS_1861" /old_locus_tag="CMS1861" /db_xref="GeneID:6158658" CDS 1969726..1971018 /locus_tag="CMS_1861" /old_locus_tag="CMS1861" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001710565.1" /db_xref="GI:170782232" /db_xref="GeneID:6158658" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATITGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 1969774..1969797 /locus_tag="CMS_1861" /old_locus_tag="CMS1861" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 1969852..1969917 /locus_tag="CMS_1861" /old_locus_tag="CMS1861" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature 1970836..1970886 /locus_tag="CMS_1861" /old_locus_tag="CMS1861" /note="PS01043 Transposases, IS30 family, signature." gene complement(1971117..1971311) /locus_tag="CMS_1863" /old_locus_tag="CMS1863" /db_xref="GeneID:6157592" CDS complement(1971117..1971311) /locus_tag="CMS_1863" /old_locus_tag="CMS1863" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710566.1" /db_xref="GI:170782233" /db_xref="GeneID:6157592" /translation="MRARNRIVFVITLIVTSGLLTAGVILFATSGVDDLRGRGLCFAA TGIGMSYVVVRLVQRRRTDR" sig_peptide complement(1971117..1971200) /locus_tag="CMS_1863" /old_locus_tag="CMS1863" /note="Signal peptide predicted for CMS1863 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.926 between residues 28 and 29" misc_feature complement(order(1971141..1971197,1971225..1971293)) /locus_tag="CMS_1863" /old_locus_tag="CMS1863" /note="2 probable transmembrane helices predicted for CMS1863 by TMHMM2.0 at aa 7-29 and 39-57" gene complement(1971383..1972006) /locus_tag="CMS_1864" /old_locus_tag="CMS1864" /db_xref="GeneID:6157593" CDS complement(1971383..1972006) /locus_tag="CMS_1864" /old_locus_tag="CMS1864" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710567.1" /db_xref="GI:170782234" /db_xref="GeneID:6157593" /translation="MAASLAVVAGTFVASPAMADSHPGPERRYGSPLTTAAIAAGDAS IAKIRDLGDALTTIHGSVHFDAALALERGAAPVTVREVAVGIVAGGGAVSGITVDDSK VLDVTRIVLDSRCAGVTNYSTQWFGRQLKLNSCDTSRLIAALAVGAGIATLAAIVTAE TGVGAIAGGVIAALLSIGAGAIAFCAADGNGVIVDQSWTGAPWCAGQ" sig_peptide complement(1971383..1971439) /locus_tag="CMS_1864" /old_locus_tag="CMS1864" /note="Signal peptide predicted for CMS1864 by SignalP 2.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.565 between residues 19 and 20" misc_feature complement(order(1971452..1971520,1971530..1971589)) /locus_tag="CMS_1864" /old_locus_tag="CMS1864" /note="2 probable transmembrane helices predicted for CMS1864 by TMHMM2.0 at aa 140-159 and 163-185" gene 1972231..1972797 /locus_tag="CMS_1865" /old_locus_tag="CMS1865" /db_xref="GeneID:6157594" CDS 1972231..1972797 /locus_tag="CMS_1865" /old_locus_tag="CMS1865" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710568.1" /db_xref="GI:170782235" /db_xref="GeneID:6157594" /translation="MDPVTLRTARLTLRPPALDDVDAIQAACQDPAIQRYVPVPVPYA REDGVAYVTGFSPDGWTSGDRLTWAVLEGGGLVGTVGLHAIADGAAEIGYWLAPGARG RGLMREAAAVVVDHGFDTGSGLGLVRIGWRAYAGNTGSAAVAQSLGFRFEGVARLGAM GRDGREDDWLAGLLATDDRTPPPWPVLG" misc_feature 1972432..1972680 /locus_tag="CMS_1865" /old_locus_tag="CMS1865" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 2.9e-09" gene 1972779..1973657 /locus_tag="CMS_1866" /old_locus_tag="CMS1866" /db_xref="GeneID:6157595" CDS 1972779..1973657 /locus_tag="CMS_1866" /old_locus_tag="CMS1866" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710569.1" /db_xref="GI:170782236" /db_xref="GeneID:6157595" /translation="MAGARVTDDGLLGRDVTITTSDGRRLRAMVAGEGDDLVVLEAGL GGSGLTWGLVHGILARTHRVVAYDRAGLGDSDPDPAPRDLDRLADDLEAVVAAFPHRR LVLVGHSWGGPIVRVAAARRIARGIPTAGVVLVDPSDERARAYASPAARVGFGVQAAL LVPLARLGILRRLHRIALAGLPEPLRTAAVGAAGSVRAARATAAEQRHLLPGLAGIAG ILGSAAPLPGIPVRVISGTTSSALTRGQRRDLVRAHRVSAAAVEQGEWIPAARSEHMV PVTDPDVVAAVVTALL" misc_feature 1972962..1973648 /locus_tag="CMS_1866" /old_locus_tag="CMS1866" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 3.4e-06" misc_feature 1973085..1973114 /locus_tag="CMS_1866" /old_locus_tag="CMS1866" /note="PS00120 Lipases, serine active site." gene complement(1973674..1974990) /locus_tag="CMS_1867" /old_locus_tag="CMS1867" /db_xref="GeneID:6157596" CDS complement(1973674..1974990) /locus_tag="CMS_1867" /old_locus_tag="CMS1867" /codon_start=1 /transl_table=11 /product="putative esterase" /protein_id="YP_001710570.1" /db_xref="GI:170782237" /db_xref="GeneID:6157596" /translation="MSAFSPPCGPVVGWADGDVVRATGIPYATAARFAAPVPHPDWTE PRAATTWAPACPQPPMEELDAVLGSFSGLAVDEDCLRVSVTMPRDVRPDDALPVMVWI HGGSYVSGAGDVPIMDPPALVAEQRVVVVTITYRLGLLGYLGDGGDRPANLGLLDQLE ALRWVARNIHAFGGDPDRVTAFGQSAGGDAVAHLMAVPEAAGLFRRAIIQSAPLGISR GRRRMNAAMARASRGLTADMPVEDVIARQAGVERVAAPYGLLGAMPFGTQYGHAPLPP EAGIDAAWDAAAPGVDVLIGNTAEEARLFLPGIPWLARLTRLPIVGPLVRRAAVAAVT GIIYGIPARRFARRHALAGGTAHRYVIRWSAPGSPFGAAHTVDLPLLFGDEDAWRGAG LLAGADWEGIQRDARRVRQVWGDFARGRFPTRQLIPGVLELRRVRG" misc_feature complement(1973680..1974990) /locus_tag="CMS_1867" /old_locus_tag="CMS1867" /inference="protein motif:HMMPfam:PF00135" /note="HMMPfam hit to PF00135, Carboxylesterase, type B,score 8e-53" gene 1975068..1975694 /locus_tag="CMS_1868" /old_locus_tag="CMS1868" /db_xref="GeneID:6157597" CDS 1975068..1975694 /locus_tag="CMS_1868" /old_locus_tag="CMS1868" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710571.1" /db_xref="GI:170782238" /db_xref="GeneID:6157597" /translation="MPRLIDHARREDELAEAVWRVIHRDGASGVSVRTVAAEAGLSTG SLRHSFPSRIDLMTHATALVAARIDGRIRSRRTDPDARRRAVRILAEHLPLDDSRRAE AEVTAALLADAASHPRLREVRAAAHAAARETCLEQLAQLRAAGLLRPDADPEIEADHL QALLGGLALQLLVEEPDPARSARALGVLERHVDALVARRVDRPARIDA" misc_feature 1975107..1975247 /locus_tag="CMS_1868" /old_locus_tag="CMS1868" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 0.00019" gene complement(1975691..1976128) /locus_tag="CMS_1869" /old_locus_tag="CMS1869" /db_xref="GeneID:6157598" CDS complement(1975691..1976128) /locus_tag="CMS_1869" /old_locus_tag="CMS1869" /codon_start=1 /transl_table=11 /product="putative protein phosphatase" /protein_id="YP_001710572.1" /db_xref="GI:170782239" /db_xref="GeneID:6157598" /translation="MAERIPHVVFVCARNGGKSQLAAALMRHTAGDAVAVTSAGTDPG PSLNALAVESLAELGIDVGGERPKPLTDDMVRAADLVVVLGAEAHVDGDQDVAVETWI TDEPSERGIDGMERMRLVRDDIGARVEELRGRLRGAGDAPAAD" misc_feature complement(1975727..1976113) /locus_tag="CMS_1869" /old_locus_tag="CMS1869" /inference="protein motif:HMMPfam:PF01451" /note="HMMPfam hit to PF01451, Low molecular weight phosphotyrosine protein phosphatase, score 2.4e-21" gene 1976238..1976591 /locus_tag="CMS_1870" /old_locus_tag="CMS1870" /db_xref="GeneID:6157599" CDS 1976238..1976591 /locus_tag="CMS_1870" /old_locus_tag="CMS1870" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_001710573.1" /db_xref="GI:170782240" /db_xref="GeneID:6157599" /translation="MPTLAPRLDVMTRLGRALADPTRSRILLELLDGPAYPALLAERL GLTRQNVSNHLACLRGCGIVRTVPEGRSTRYEIEDPRIARGIGALVEVVLAVDDDREC ADPALCDPGCCEAGA" misc_feature 1976280..1976513 /locus_tag="CMS_1870" /old_locus_tag="CMS1870" /inference="protein motif:HMMPfam:PF01022" /note="HMMPfam hit to PF01022, Bacterial regulatory protein, ArsR, score 2.3e-14" misc_feature 1976340..1976405 /locus_tag="CMS_1870" /old_locus_tag="CMS1870" /note="Predicted helix-turn-helix motif with score 1243.000, SD 3.42 at aa 35-56, sequence AYPALLAERLGLTRQNVSNHLA" gene 1976588..1977298 /locus_tag="CMS_1871" /old_locus_tag="CMS1871" /db_xref="GeneID:6157600" CDS 1976588..1977298 /locus_tag="CMS_1871" /old_locus_tag="CMS1871" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710574.1" /db_xref="GI:170782241" /db_xref="GeneID:6157600" /translation="MSGLASAAPAPAPRLTVARRDLLRRRIRWIVAGTIAWNAVEAVV ALAAGAVASSTALVAFGLDSIVEVLAASAVAWQFSAPDPEARERAALRLIAVSFLGLA AYVSVDAVLALAGGNEARPSPTGIVLAALSLAVMPVLSLLERRTGTELGSASAVADSR QTLVCAWLSAALLIGLLLDAGLGWWWADPVAGLAIAAFAVREGVEAWRGDACTVPVGA LTGERVHDEHDANDDACC" misc_feature order(1976672..1976740,1976753..1976821,1976858..1976926, 1976954..1977013,1977074..1977142) /locus_tag="CMS_1871" /old_locus_tag="CMS1871" /note="5 probable transmembrane helices predicted for CMS1871 by TMHMM2.0 at aa 29-51, 56-78, 91-113, 123-142 and 163-185" gene complement(1977344..1980634) /locus_tag="CMS_1872" /old_locus_tag="CMS1872" /pseudo /db_xref="GeneID:6157601" gene 1980961..1981431 /locus_tag="CMS_1874" /old_locus_tag="CMS1874" /db_xref="GeneID:6157602" CDS 1980961..1981431 /locus_tag="CMS_1874" /old_locus_tag="CMS1874" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710575.1" /db_xref="GI:170782242" /db_xref="GeneID:6157602" /translation="MTNAPHPDAAPPAEPGARPAGSPASHAVTGSAPTVGFAALVRGT RDRSDRPSRLGRLFAVIAVIEAITWTGLLVGMFLKYVTETTELGVYVFGRLHGAAFVL YVIVTAVAAIPPLATLPLEVGLRRRGYLRQPADAADGGARTTAVSTSDSASARG" misc_feature order(1981126..1981194,1981252..1981320) /locus_tag="CMS_1874" /old_locus_tag="CMS1874" /note="2 probable transmembrane helices predicted for CMS1874 by TMHMM2.0 at aa 56-78 and 98-120" gene complement(1981442..1982104) /locus_tag="CMS_1875" /old_locus_tag="CMS1875" /db_xref="GeneID:6157603" CDS complement(1981442..1982104) /locus_tag="CMS_1875" /old_locus_tag="CMS1875" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710576.1" /db_xref="GI:170782243" /db_xref="GeneID:6157603" /translation="MTASASEPLPTPIAPSPDEPTTAGIPHSVIEDVLGILTGTFVAS FGLYLLRDAGAVTGGTAGLALLLSYTGVLPFGVLFFVVNAPFFALAVWKKGWRFTIRT VISVALVSLFSTLHPAMVTGLELQPVYGVLAGNLLVGIGLLVVFRHGSSLGGFNIVAL IVQERFGFPAGYAQMILDVIVILLGLTVVPLEGVVWSALGAVLLNLVLALNHRPGRYT GI" misc_feature complement(order(1981475..1981528,1981541..1981609, 1981667..1981726,1981739..1981807,1981844..1981912, 1981955..1982008)) /locus_tag="CMS_1875" /old_locus_tag="CMS1875" /note="6 probable transmembrane helices predicted for CMS1875 by TMHMM2.0 at aa 33-50, 65-87, 100-122, 127-146,166-188 and 193-210" misc_feature complement(1981481..1981726) /locus_tag="CMS_1875" /old_locus_tag="CMS1875" /inference="protein motif:HMMPfam:PF02588" /note="HMMPfam hit to PF02588, Protein of unknown function DUF161, score 5e-14" misc_feature complement(1981766..1982011) /locus_tag="CMS_1875" /old_locus_tag="CMS1875" /inference="protein motif:HMMPfam:PF02588" /note="HMMPfam hit to PF02588, Protein of unknown function DUF161, score 2.9e-18" gene complement(1982231..1982755) /locus_tag="CMS_1876" /old_locus_tag="CMS1876" /db_xref="GeneID:6157604" CDS complement(1982231..1982755) /locus_tag="CMS_1876" /old_locus_tag="CMS1876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710577.1" /db_xref="GI:170782244" /db_xref="GeneID:6157604" /translation="MIRLRRRRPPVEPESPYPARSFLRNPAVPAYDDWLPSGIAGCIR LSGYPHPWVMARRNGNDFFLRDDAYRLKLPEDVLRYGDGEYDWTVGTAEGAFAPAPEG SIIDVVTTVLEVEWDASPEAWQEARAWFVRDSERRWDSMMTGERRSIERLVGRRRRRT SQGYFDVDPFDGPI" gene complement(1982752..1983261) /locus_tag="CMS_1877" /old_locus_tag="CMS1877" /db_xref="GeneID:6157605" CDS complement(1982752..1983261) /locus_tag="CMS_1877" /old_locus_tag="CMS1877" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710578.1" /db_xref="GI:170782245" /db_xref="GeneID:6157605" /translation="MIVLRPRTGAQGLGGARMWVADDGVFHVEYLWGARDLLSDEASR ALHLVPGATYRALMRNVMDTFSDISDRLHEMKAWADQTAFVEEPIPVELLAPISSATT FTELRHELIHLPHDIDPQWRLDAAGACWDIVSTVGRERRGIGSRLRRLGGRVRSRGLG PLAGRRQPS" gene complement(1983258..1983749) /locus_tag="CMS_1878" /old_locus_tag="CMS1878" /db_xref="GeneID:6157606" CDS complement(1983258..1983749) /locus_tag="CMS_1878" /old_locus_tag="CMS1878" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710579.1" /db_xref="GI:170782246" /db_xref="GeneID:6157606" /translation="MAVAERHRGTILSPSSGTVIALRRQEVHALVGALRDPLGADRDD AQDEIRMEIIRALGDRLTSGAGEVGEPAGDARADEMFPAYVVPMLPGRRAASMLSGII NRLPHGDRAEVLDPSEVCVYIFLRGSDLSLRDLLMSADARICNEELRSGLIEDFLEYL NAS" gene complement(1984188..1987322) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /db_xref="GeneID:6157607" CDS complement(1984188..1987322) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /codon_start=1 /transl_table=11 /product="TD repeat-containing membrane-anchored protein" /protein_id="YP_001710580.1" /db_xref="GI:170782247" /db_xref="GeneID:6157607" /translation="MRITDPGDEVTDLAYDGGRLTAVRDALADDWLAADARRTADANV ATTIAYDASGRATTVTLPAPDGVTAAKRPTKTYVYGSGTTSIDVPALGLPAGTHASTV TYDDAWRQTSITGPSGLTASSEWNQKDLPLASVDAQGRKSTTLYDAQDRPTDSYGPAP ASCFGSDRVPTAACAATTAHSSTGYDSGLHGLDAVWYDNGRLAGAPRAYGLGVGNADG SVDQDWGNGSPPAAGDGFPSDGFSLRLTGLVTAPQDGDYTFATKADDGTQLFIDDIPL IDAWGANPGNEIRANHAVHLAAGQTARIRLQYNEGQVSASLKLEWQIGSGAMVVVPGS ALTPDYGLQTSVTAADQAPTGVAGISASQISSATSVTQYDEPWLGIATASVVDPKGLA LTHSGTHEARGTGYLRGLTRTLPAQANVATTSAYYGATETIASAWGASGKVCGVDAST PQYGGTKTTTGAKPASGDAIVTSFVYDVMGRAIGSKRSGDADWSCTSYDARGRATSST TAAFGSVAARTEKTDYAVGGDPLTGAVSDGSVTGSTSGGTVTTVANLLGQAVKYTDVW GTVTTMSYDAAGRVTSTVATPPSGTAHTTSYEYDIDSRVDVMRVDGKVIADPTYAKGE LTGISYPSGANGAGNDSSLSEITRNGAGAVTGIGWSFPGKQTAVTDRVIRSQAGDVLQ DTTSDGTTSNVSTYSYDAAGRLVTAVIPHHRLTYGFDALAGSSACTQAGAVAAAGRNG NRTASSDVLDGGTPTTVASCYDGADRLLGTTVTNAPADASPVNRSLSAAQLVYDAHGN TVQLADETLSYDGGDRHTATKLADGASVSYMRDATDRIVQRTEVTAAGVTTVTRYGFT GSGDAPDFVLDVSSTATEWDLPLPGGVTAEFRNGSAVWSYPGIHGDILVTADQAGTRA PGLAVYDPFGQVEDPKTGALGTVAANQSGLDTQQGNADYGWLGQHQKLSEHLGGIATI EMGARQYVAALGRFLQVDPVLGGTDDDYAYPNDPVNSFDLTGQFAFLIPLAVLLVVAL GLAVLATAIVLGAW" misc_feature complement(1984197..1984265) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /note="1 probable transmembrane helix predicted for CMS1879 by TMHMM2.0 at aa 1020-1042" misc_feature complement(1984779..1984898) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 2.6" misc_feature complement(1984902..1985042) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 3.9" misc_feature complement(1985181..1985291) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 0.075" misc_feature complement(1985478..1985603) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 1.3" misc_feature complement(1985778..1985897) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 1.2" misc_feature complement(1986318..1986761) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF07691" /note="HMMPfam hit to PF07691, PA14 domain, score 5e-13" misc_feature complement(1986837..1986950) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 4.7" misc_feature complement(1986963..1987175) /locus_tag="CMS_1879" /old_locus_tag="CMS1879" /inference="protein motif:HMMPfam:PF05593" /note="HMMPfam hit to PF05593, YD repeat, score 1.8" gene complement(1987341..1990652) /locus_tag="CMS_1880" /old_locus_tag="CMS1880" /db_xref="GeneID:6157608" CDS complement(1987341..1990652) /locus_tag="CMS_1880" /old_locus_tag="CMS1880" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710581.1" /db_xref="GI:170782248" /db_xref="GeneID:6157608" /translation="MRPARRLTSTAVIVALALVAEIFVALPAEAATTPTRPVASVPAL TSDDVDVATPTIPSGSVDAPAPAYAQAPADPSAPAADESAVSPSSLSASAVARPRRAA SASQLQDSAQLVSQSQFQDTYANDDGTESAVLSQTPLNVQDTKGDWVPVNTDITVRSS GAGVVPDHPLAPRFADSASDAGVLTLHHDGHVLKYTLDGAADSPLERPSADEVQYRDV FPRTDLHYAVTAGQVKEELILAAPPVPAAPSYTWHVSAAGLHAAQDADGSILFTDKAG SVVFGIPAPRMYDSSGIPDVQEPADAPVATTLTADGRGWTIRMAPDPAWLASPERAYP VHVDPSSVASWSNDQHEYKSDGTRLTDGTVRIGNARDHGDKYWRTVEHFDYEQLFGKQ VLSARIDGSYYNGGTKALFGGSISAATSFSYNGVGDRLSQFAMSDNGSAQDDRLTDEI AKYVRDGSRGAYLIIGGDERPGVYTYKSIAVALVVTYKDMPTAGPAIAPSPADGARGP VMPTLAISGTDPEGTGLQYFYRISAGDDPEVGPVWESGWGAQQVKVPFGALKPGTRYH WKGYVKDGYDGVHGTSTLGISSTWSFTTNTPAMTAQAGSAPADGSVITTTTPTLTAPT IADPDGDPVRYRFQIASGADGTTGAVATSGWQAGTTWTVPANSLQDGGRYTWSVRASD GYDEPPVTWTDKIRVDRRVGDAGPAPTDTAGPVSVNLANGNVGLRFASPTVQTVGGSM GLGFSYNSMQAGSGGLLGRYYDGAAPLGDGDACHADAGTLATTRTDPSISFDWGDGSP APGVDVDDFSAKWTGFLHVPTTGTYTFGMTRDDGGCVRVDGSTVYSGWRDDHVAQDTT GSTPTALTQGKPVPLEVDYFEHAGEAGVSLWVTDPTGAQYVVPADWFTRTVDTLPAGW SSTTALEGDAGDWSRAQVTDSAVILTDASGTAHTYTRTAGDGSGTGYTAPTGEHDRVS LDQSRQVVVTGDDGTITTFDPSGRVQGVTGPGDALKRATPLSARRPGTGLVDRISDPL SALGTSPETYGREVRFAYAGDTAPSLGLDAKDTDSTGSACPVAAGFAAPPADMLCRIV YPGHVAGAADTTRLS" misc_feature complement(1987947..1988399) /locus_tag="CMS_1880" /old_locus_tag="CMS1880" /inference="protein motif:HMMPfam:PF07691" /note="HMMPfam hit to PF07691, PA14 domain, score 3.8e-21" gene complement(1990819..1991700) /locus_tag="CMS_1881" /old_locus_tag="CMS1881" /db_xref="GeneID:6157609" CDS complement(1990819..1991700) /locus_tag="CMS_1881" /old_locus_tag="CMS1881" /codon_start=1 /transl_table=11 /product="putative iron-chelating protein" /protein_id="YP_001710582.1" /db_xref="GI:170782249" /db_xref="GeneID:6157609" /translation="MTDSSAPAVPDRPVRAARTQHVLEVVRAERLTPHLVRVHLGGEG MRALLERAAPERLAATDAYVKLMLPPRGSGLTPPYDLPALRETRPAEALPAVRTYTLR HADPAAGTCAIDFVVHGDEGLAGPWAASAQPGDLLAASGPGGMYRPSEDAAIARVLLG DDSAVPAIAAALAAMPADATGVALLEVDGPDDELPLAHPSGVAVRWIHRSRTPDAVPG APLVAAARALERPDGEVEVFAHGERGAMKELRAVLQDGWGIDRRALSLSAYWALGRAE DRFQAEKREPVGVIFGE" misc_feature complement(1990843..1991658) /locus_tag="CMS_1881" /old_locus_tag="CMS1881" /inference="protein motif:HMMPfam:PF04954" /note="HMMPfam hit to PF04954, Siderophore-interacting protein, score 1.2e-46" gene 1991795..1992493 /gene="lipB" /locus_tag="CMS_1882" /old_locus_tag="CMS1882" /db_xref="GeneID:6157610" CDS 1991795..1992493 /gene="lipB" /locus_tag="CMS_1882" /old_locus_tag="CMS1882" /EC_number="2.3.1.-" /note="lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein" /codon_start=1 /transl_table=11 /product="lipoate-protein ligase B" /protein_id="YP_001710583.1" /db_xref="GI:170782250" /db_xref="GeneID:6157610" /translation="MVDIVVTGLSANSVPYIEALERQRALHADVVAGRAQDTVILLEH PSVYTAGRRTEPDDRPRDGTPVIDVDRGGRITWHGPGQLVGYPIVRLPEPLDVVAHVR RLEDALIALLAELGIASCRVDGRSGVWIRGTAPDGTPRDEKVAAIGVRVAERVTMHGF ALNCSNALDAYDRIVPCGIRDAGVTSLSRVLGRTVTPADVVPLLRPHLVRALSNGSAM PATPALPSAAGARA" misc_feature 1991942..1992304 /gene="lipB" /locus_tag="CMS_1882" /old_locus_tag="CMS1882" /inference="protein motif:HMMPfam:PF03099" /note="HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase, score 1.3e-22" misc_feature 1992005..1992052 /gene="lipB" /locus_tag="CMS_1882" /old_locus_tag="CMS1882" /note="PS01313 Lipoate-protein ligase B signature." misc_feature 1992158..1992244 /gene="lipB" /locus_tag="CMS_1882" /old_locus_tag="CMS1882" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 1992490..1993479 /gene="lipA" /locus_tag="CMS_1883" /old_locus_tag="CMS1883" /db_xref="GeneID:6158796" CDS 1992490..1993479 /gene="lipA" /locus_tag="CMS_1883" /old_locus_tag="CMS1883" /EC_number="2.8.1.-" /note="catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group" /codon_start=1 /transl_table=11 /product="lipoyl synthase" /protein_id="YP_001710584.1" /db_xref="GI:170782251" /db_xref="GeneID:6158796" /translation="MSAAPEGRRMLRLEVRNAETPIERKPEWIKTKARMGPEYQALQQ LVKTEDLHTVCQEAACPNIYECWEDREATFLIGGSQCTRRCDFCQIDTGKPADYDTDE PRRVADSVRRMGLRYATVTGVARDDLPDEGAWLHAETVRRIHADNPGTGVEILATDFS GNPDLLAEVFSSRPEVFAHNVETVPRIFKRIRPAFRYERSLDVITQGRDADLITKSNL ILGMGETREEVSEALADLHDAGCDIITVTQYLRPSPRHLPVARWVRPEEFVEIKAEAE AIGFLGVLAGPLVRSSYRAGRLYAQSMSAKGRELPASLAHLADPANGFAQAVG" misc_feature 1992712..1993197 /gene="lipA" /locus_tag="CMS_1883" /old_locus_tag="CMS1883" /inference="protein motif:HMMPfam:PF04055" /note="HMMPfam hit to PF04055, Radical SAM, score 3e-17" gene 1993554..1994189 /locus_tag="CMS_1884" /old_locus_tag="CMS1884" /db_xref="GeneID:6158795" CDS 1993554..1994189 /locus_tag="CMS_1884" /old_locus_tag="CMS1884" /codon_start=1 /transl_table=11 /product="PadR family transcriptional regulator" /protein_id="YP_001710585.1" /db_xref="GI:170782252" /db_xref="GeneID:6158795" /translation="MRGLSSGGPRTSHSKELVMAATSPSAGSAFGDAADGVWQAMESL RARFEKRDGTTAGHDAGHGAGPHDVRHAVLALLAEEPMHGYRIIHEIQERTAGAWTPN AGSVYPTLQLLTDEGLIAAETTDGRKVYALTESGRATIARDGITAPWADASHGHDAHD RHDRSALPKAGLSLAQAAAQVQRTGTPAQVAEAVTELDAARRRLYAILARE" misc_feature 1993743..1993982 /locus_tag="CMS_1884" /old_locus_tag="CMS1884" /inference="protein motif:HMMPfam:PF03551" /note="HMMPfam hit to PF03551, Transcriptional regulator PadR-like, score 4.4e-26" gene 1994186..1996106 /locus_tag="CMS_1885" /old_locus_tag="CMS1885" /pseudo /db_xref="GeneID:6157611" misc_feature 1994555..1994935 /locus_tag="CMS_1885" /old_locus_tag="CMS1885" /inference="protein motif:HMMPfam:PF03109" /note="HMMPfam hit to PF03109, ABC-1, score 9.5e-31" /pseudo gene complement(1996109..1996402) /locus_tag="CMS_1886" /old_locus_tag="CMS1886" /pseudo /db_xref="GeneID:6157612" gene complement(1996625..1996698) /locus_tag="CMS_r045" /old_locus_tag="CMSr045" /db_xref="GeneID:6157613" tRNA complement(1996625..1996698) /locus_tag="CMS_r045" /old_locus_tag="CMSr045" /product="tRNA-Met" /db_xref="GeneID:6157613" gene complement(1996841..1999756) /locus_tag="CMS_1887" /old_locus_tag="CMS1887" /db_xref="GeneID:6159054" CDS complement(1996841..1999756) /locus_tag="CMS_1887" /old_locus_tag="CMS1887" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710586.1" /db_xref="GI:170782253" /db_xref="GeneID:6159054" /translation="MTSTSARPARRSRAPLAITAAIIAALVIAFFIFAGFYADVLWYD QLGYLGVLLTQWGAGIALFFIGFLAMAIPVFVSIQVAYRSRPVYAKLNSQLDRYQQVI EPLRRLAMFAIPAVFGLFAGVSASSGWQRTLLWLNRTPSGTTDPQFGLDTSFYLFELP FYHAVVGFASAVVIISMLGVLATSYLYGAVRFTGREVRISKSSRIQIAITAGVYFLLQ GVSIWLDQYSSVVNTANGGLFTGAAFSDVNAVIPGRTILAGIAVVVAVMFIITAAIGR WRLPIIGTAGLIVASILIGTAYPAIVQRFQVEPNERSLESPFYERNIEATRAAYGLAD IEEIPYDATTDTTPGALREDAATTANIRILDPAVVGDAFSQLQQFRQYYQFGDNLDVD RYQIDGRVQDTVVAVRELSPTNTGTSWVNQHLVYTHGYSLVAAYGTQRTSDGQPVFLE SGIPASGDLGDFEPRVYFGEDSPDYSIVGGPESGDKVELDYPSGVDGADETYTTFQGD GGPKVDNVFKRLIYALKFQSEQIFLANQINDQSQILYDRDPAERVGKVAPYLTVDKDP YPSVVDGRVVWIVDGYTTSDQYPYSQQTQPLVPTDRINYIRNSVKATVDAYDGKVTLY AWDTDDPILKTWQKVFPSTLKPIADISGELMSHLRFPADMFKVQRAVLGKYHVTDPGS IYSNQDLWTTPNDPTATTEAGTPASLQPPYYLTMQMPGQDSPRFSLYSTFIPPATQDT SRSVLTGYLGVDSDAGSTAGEKAADYGKLRLLTLPNDDTIPAPTQIQNNFNSDTNVAN QLNLLERGGRTSVVRGNLLTLPVGGGLLYVQPVYVRSTGDTSYPLLRKVLVAFGDKIA FEDTLDAALDSIFEGDSGATAGDEDVVPTTPADGAAGDGSTDGATDGGTGSTPTPAPT ASPAAPAQDVQAALDAANTALQERQAAYASGDLVAAAQADQRFTEAVQRAYELSQQQ" sig_peptide complement(1996841..1996954) /locus_tag="CMS_1887" /old_locus_tag="CMS1887" /note="Signal peptide predicted for CMS1887 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.622 between residues 38 and 39" misc_feature complement(1997348..1999729) /locus_tag="CMS_1887" /old_locus_tag="CMS1887" /inference="protein motif:HMMPfam:PF03699" /note="HMMPfam hit to PF03699, Protein of unknown function UPF0182, score 1.5e-283" misc_feature complement(order(1998854..1998922,1998941..1999009, 1999085..1999138,1999199..1999267,1999367..1999435, 1999517..1999585,1999628..1999696)) /locus_tag="CMS_1887" /old_locus_tag="CMS1887" /note="7 probable transmembrane helices predicted for CMS1887 by TMHMM2.0 at aa 21-43, 58-80, 108-130, 164-186,207-224, 250-272 and 279-301" gene complement(1999884..2000975) /locus_tag="CMS_1888" /old_locus_tag="CMS1888" /db_xref="GeneID:6157614" CDS complement(1999884..2000975) /locus_tag="CMS_1888" /old_locus_tag="CMS1888" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710587.1" /db_xref="GI:170782254" /db_xref="GeneID:6157614" /translation="MSLFAQHAPRAPRPARRRRVGRVLAGTGAVLALALGLMPSPYVI EQPGPVFDTLGTSDHEGTERPLISIPDRTTYPTDGRLDMLTVSVVGNPAQRPDWFSVV SAWLDPTRSVVPMEAVFPAEQTAEERDAQNQVQMTDSQQDAVAAALTELGIQVPRTLQ VQSILDGSPAAGPLRTGDAIRTVDGQDVVDLADLQARVAAAGTSTPLSFGITRDGQES TVEVTPAERDGRPVIGIVTSTSYEFPFEVDIQLDDVGGPSAGMMFALGIMDKLEEGSL TGGKAIAGTGTIDAAGDVGPIGGIRQKLYGAERAGAEYFLAPADNCDEVRGHVPDGLR VFSVSTLDDSLAALAAISTDGDLDALPTC" sig_peptide complement(1999884..2000018) /locus_tag="CMS_1888" /old_locus_tag="CMS1888" /note="Signal peptide predicted for CMS1888 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.778 between residues 45 and 46" misc_feature complement(2000340..2000558) /locus_tag="CMS_1888" /old_locus_tag="CMS1888" /inference="protein motif:HMMPfam:PF00595" /note="HMMPfam hit to PF00595, PDZ/DHR/GLGF, score 1.7e-05" misc_feature complement(2000850..2000918) /locus_tag="CMS_1888" /old_locus_tag="CMS1888" /note="1 probable transmembrane helix predicted for CMS1888 by TMHMM2.0 at aa 20-42" gene 2001189..2002604 /locus_tag="CMS_1889" /old_locus_tag="CMS1889" /db_xref="GeneID:6157615" CDS 2001189..2002604 /locus_tag="CMS_1889" /old_locus_tag="CMS1889" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710588.1" /db_xref="GI:170782255" /db_xref="GeneID:6157615" /translation="MADEPTPNPEDEFRRMLERFLGADGQIDPDKLAGAAGLPQDPEM VRQLLAQLQGALANTGDGVDWKVAREGARQLAAKDQTQVTAAASAPLDQAFQVAALWL DEVTYVSQLTVAPRLITRAQWTELTMPVWTQLAEPVALSIADSLTEVLQQNAPEEMQG MVAGAGRMMRNLGGTLFAVQLGQVVGRLSTEVVSGGDVGIPLLDDQQAALLPQNVQAF GSGLDVSDDQVQIYLAVRELAHARLFRHARWLRLQLISSITEFAKGVHIDTERLESLA EGFDPSNPEELRQAMVDGSLIPPKTEAQLAALARLETMLALIEGWVDVVTAAATVRLP RASAIAETVRRRRATGGPAESAFATLVGLELRPRRLREAAAMWQAVSDGVGAEQRDAL WSHPDVLPTSEDIDAPHALVARLTQDEPEPDEVDQALEDLLSGSDAGRPLEDGQGRAT EPGEMPGDGPDDAPGTDPRPV" gene 2002698..2003657 /locus_tag="CMS_1890" /old_locus_tag="CMS1890" /db_xref="GeneID:6157616" CDS 2002698..2003657 /locus_tag="CMS_1890" /old_locus_tag="CMS1890" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710589.1" /db_xref="GI:170782256" /db_xref="GeneID:6157616" /translation="MDALPASRARRAISAPMAIRLDPRLPLVWRTPDSLQLGVDRPPV VLSAVSRLDERLLDALVHGISRGGLDMIAATEGAGPAHVTQLLDLVRPALLPPRDGGS PSGLDATTTRRARTGPVAVVGGGATADRIADALARAGHDVAPRRMADDADPRTALAVI VAHFAIAPAVYGRWSREDVPHLPVVLGDRHAVVGPLVEPGRTVCCYCLDLGRRDADPA WPAIATQLLGRDSGSEAGLVPTELAALAARPADRLLTTGENALATHQAVLDVRSGRIT RRASRPHPRCGCRALPGTATAPVDPIGAVRSGSRTAGARTARG" gene complement(2003521..2005443) /locus_tag="CMS_1891" /old_locus_tag="CMS1891" /db_xref="GeneID:6157617" CDS complement(2003521..2005443) /locus_tag="CMS_1891" /old_locus_tag="CMS1891" /codon_start=1 /transl_table=11 /product="putative DNA helicase" /protein_id="YP_001710590.1" /db_xref="GI:170782257" /db_xref="GeneID:6157617" /translation="MTDQLVPGTPGRDPYGSAAPGALPAPVSLGPATATADEVEVEAP SAESLLEALDDQQRLAAQALLGPVVVLAGAGTGKTRAITHRIAYGIQAGVYPPNRVMA LTFTSRAAAELRGRLRELGAGPVAARTFHAAALKQLNFFWPQVVGGTMPRLIESKGRM LGHAAESLRLRLDTAALRDMAAEVEWRKVSMISVEEYGLAARTSRTLPPQLDADQAVA LLQAYEDIKDQRRQLDFEDVLLATAGMIEAEPWVAQQVREQYRFFVVDEYQDVSPLQQ TILDLWMGDRRDLCVVGDASQTIYSFAGAKSAYLLDFASRFPEATVVRLERNYRSTSG ITEAANRLMRGRPGALTLVSADADPDGDGTGASSARATKGRGSAAVPGRGEGFRAPQV SAFPSDGAEARAIAGAIAQQISSGIAPEDIAVLYRMNGQSAVLEQALGDAGVSYQVRG SQRFFDRPEIKQALLALRGASVSISGEPLFKSVSDVLRGLGWSQQPPEQQGAVRDRWE SLDAIMGLAERMPAGSTFRAFTDELLERQAGQHEPTVSAVTLATLHSAKGLEWEHVYL MGLSEGLVPISYAQTLEAVDEERRLLYVGITRARSGLRLSWSRSGPHRSGQREPSRFL AELDTRIAGGGAKRGA" misc_feature complement(2003770..2005287) /locus_tag="CMS_1891" /old_locus_tag="CMS1891" /inference="protein motif:HMMPfam:PF00580" /note="HMMPfam hit to PF00580, UvrD/REP helicase, score 1.2e-76" misc_feature complement(2005207..2005230) /locus_tag="CMS_1891" /old_locus_tag="CMS1891" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2005454..2006476) /locus_tag="CMS_1892" /old_locus_tag="CMS1892" /db_xref="GeneID:6157618" CDS complement(2005454..2006476) /locus_tag="CMS_1892" /old_locus_tag="CMS1892" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710591.1" /db_xref="GI:170782258" /db_xref="GeneID:6157618" /translation="MGGPSAPPSLPFGPSAPEVDWSPVLDSFLSRLPLSREGVDRDGL HRDSPALFDELWADPATRVLALHGHRALGSVADGRAALDLLPVDRVTAATVRIYLGRS TIAHEGEPVGTPVVAAVLTDAAAAELAPAEERWLELRTTATQLDDRDAALFTGALATA NWHASHPFSPKTGEPTVVEQGGWVRRAPSDGSQVFPRTDAAVIMGVVDADDRLLLGAN AMWGGDRYSLLAGFVEPGESFEAAVKREVLEESGVTVEDPHYLGSQPWPFPASVMVGF LARVSATSGPATPDGVEIIDLRWFSREELRASLGEIALPGPSSIARAIIEEWYGGPLE DGEREW" misc_feature complement(2005502..2005885) /locus_tag="CMS_1892" /old_locus_tag="CMS1892" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 1.7e-22" misc_feature complement(2005727..2005786) /locus_tag="CMS_1892" /old_locus_tag="CMS1892" /note="PS00893 mutT domain signature." gene 2006548..2007624 /locus_tag="CMS_1893" /old_locus_tag="CMS1893" /db_xref="GeneID:6157619" CDS 2006548..2007624 /locus_tag="CMS_1893" /old_locus_tag="CMS1893" /codon_start=1 /transl_table=11 /product="putative macrolide phosphotransferase" /protein_id="YP_001710592.1" /db_xref="GI:170782259" /db_xref="GeneID:6157619" /translation="MARSHLTLAALATSAVSGLDVVRSTPFTAGGAGDFDSALLTTKD GRELLVRVPTTQAAESEQSADLVALRALSTGIRSRLPFQVPEFLGQAAIKPTRGFVYG HVPGRVISLDEIPAGDGLARSIGAAVSAVHSLPTGFVADAGLPVLSAAEIHSQTAALI DRAAATALVPSLLLSRWEEALDDQSLWQFQPAVVNGAVQASSFLVDGDDVTGMIGWSE LRVADPAHDLHWVLGARAEHVAESVFRAYNQAHHVTVDRQLKQRALLYAELEIARWLL HGTDTRNQGIIDDAVNMLSALVDTVRADEGQRIAHETLPVMDVDQVEEMLDSRPQPTV SPDGARDASGVRAPDQSATRSSSE" sig_peptide 2006548..2006640 /locus_tag="CMS_1893" /old_locus_tag="CMS1893" /note="Signal peptide predicted for CMS1893 by SignalP 2.0 HMM (Signal peptide probability 0.981) with cleavage site probability 0.413 between residues 31 and 32" gene complement(2007537..2010797) /locus_tag="CMS_1894" /old_locus_tag="CMS1894" /db_xref="GeneID:6157620" CDS complement(2007537..2010797) /locus_tag="CMS_1894" /old_locus_tag="CMS1894" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase" /protein_id="YP_001710593.1" /db_xref="GI:170782260" /db_xref="GeneID:6157620" /translation="MSGVGTTGGAHGNMISAQRIAETLGLPSPTEQQRRVIESPLEPG LVVAGAGSGKTETMASRVVWLLANGHVGVEEILGLTFTRKAAGELGVRIRARIEQLQQ AGLAAVPADAFATPTVQTYNAFANGIFRDSATLIGREAESVVLTEASAWQLARRLVVD STDPRLLELGRGVDPITQAVISLSRAMSENVADPAEVVRLAGSFTGLAELPFGSARIR KAPAADAVASVGALPPLVDLAVRFQEEKTRRGLVEYSDQVAFALAICERVPQVVAEHR KRFRVVLLDEYQDTSVVQTRLLSTLFGGTPVMAVGDPHQSIYGWRGASAANLARFGAD FAPAGASAADVPVYALSTSWRNPASVLGAANRIVEPLTAASRIPVARLEPRPDAGDGH LDVAYEETIADEAASVAAWFADLLRQTGSDGRPRSAAMLCRSLKTIEPFTTALADRGV PFRVLGLGGLLDQPAVVDLVCVLRVLHDPTAGSELVRLLTGARWRIGTKDVHALSRVA SWLMSRDHAQKPLAEEVRDGLRASVVPDEVGSVVDALDFVVGARDGHTALAGFSDEGL ARLRAAGRQLQVLRSRVGLDLVDLVTVVQQELLLDIEVAANETDPLGRASLEAFTEQV AGYLQGDSAGTLGPFLAWLAEAERRDNLAPRTEEPEPGTVQILTIHGSKGLEWDVVAV PRMVEGELPGTLREKKGWVAFGALPFEFRGDSAELPSLAWRGVETQKEFAEAMEAFGE ELEERNAAEQRRLAYVAITRTRSDLLLSGSFWSTQQKPRGPGAFLREIQQVGLIAPDA LPEAPELEENPLEPGSARVAWPLPPLGPREARVRAAAGAVAGADPDAETVWTRDIDLL LAERDARARDAELVDLPTRIPASRFKDFVSDPAGVAARLRRPMPERPYRQTRLGTLFH GWVEARYGPAGTSDVIDASGVELDADPTEPPVEQEDLDRLRAIFEASEWASRKPEEVE VEIHMELAGQVVICKIDAVFLIDGRYRVVDWKTGRTPKDAADLELKQLQLALYRLAFA KWRGIDPDLIDAEFYFVADDRSLKPERLYSEEDLVALWSGARTPDASRAPSGETVG" misc_feature complement(2009085..2010713) /locus_tag="CMS_1894" /old_locus_tag="CMS1894" /inference="protein motif:HMMPfam:PF00580" /note="HMMPfam hit to PF00580, UvrD/REP helicase, score 8.8e-58" misc_feature complement(2010633..2010656) /locus_tag="CMS_1894" /old_locus_tag="CMS1894" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2010794..2014063) /locus_tag="CMS_1895" /old_locus_tag="CMS1895" /db_xref="GeneID:6157621" CDS complement(2010794..2014063) /locus_tag="CMS_1895" /old_locus_tag="CMS1895" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase" /protein_id="YP_001710594.1" /db_xref="GI:170782261" /db_xref="GeneID:6157621" /translation="MTIRGFRQPPASAADGQVPAVELDPSQRAVVELPVGVSAAVIGA PGSGRTTTLRELVAERILAQGLDPAEVLVLAPSRAAATRLRDELALRVGVPTLGPLAR TATSVAFEVLARRAAETGTEPPRLLTGAEQDQIIADLLAGHEELGTGPAWPDPLGVEV RRLRAFRTELRELLMRATEEGVRPDALAELGRAHDVPEWIAAAEFAREYEDVVDSFRG DHLDSAELLAEAVLLVSRGEALTGIRLVVADDLHEATVATLSLLRALAARGADVIAFG DPDVAAATFRGAEASALGRLSTVLGLPGLRTLVLDRVHRQPPALRALTSAVTARIGAA GAGRQRQAGSAPGLVDDADPIQVIEAPTRALELARLARRLREEHLLGGVPWARMVVLV RSGSLVPQVARSLATAEVPTRTAVAGRALRDDLAALALIRAVDVVLGRVPLTPDIAAE LATGPLGGLDGVQLRRLRLAMRQEELAGDGHRSSDELLVEALAAPGRLETLDLAPARR LARLARTLQGARELAAADGTIEELLWHLWEGSGLATPWFEQALQTGIVADQANRDLDG VVALFTAARRFVERNPGRPASDFVEELLGAEVPEDTLSPQPLADTVLVATPSAVVGAG YEVVAVAALQECVWPNLRLRGSLLHPPRLSAVARGLDGADVDERAEVLGDELRMLALA VSRASRVVVLSATANDEEAPSPFLRLVPPAPGQAEAEAGAEAGRVAKDAPAALRIRPD HPLSLRGLVGALRRELAVVHRDAVLLDDGRVVSGDRTARRPADATRERGLAAASALAR LAAEGVTGADPAEWYGLREPSTTEPVVDLTDPEARVPVSPSRLEAFERSPLNWFIDQA SGGSTSTAMGIGTIVHAVMEEASLDPDADLRPPALEARLDARWGELPFESPWVGERER RQAGELIAGVSGYLRDFAADGGRMLAAEGGFELEVGVARLRGKIDRIELTKEGAVVIV DLKTGRHYPTRAEIPAHAQLGSYQLAFTEGSLEQVPAEAPSGGAKLLYVSGGTRGLPY RELPQEPLTREELDGFRARIAEAAEGMAGATFDGTPDLGERDPGSARRYRIHLVRAVS A" misc_feature complement(2012438..2013997) /locus_tag="CMS_1895" /old_locus_tag="CMS1895" /inference="protein motif:HMMPfam:PF00580" /note="HMMPfam hit to PF00580, UvrD/REP helicase, score 1.7e-10" gene 2014257..2014481 /locus_tag="CMS_1896" /old_locus_tag="CMS1896" /db_xref="GeneID:6157622" CDS 2014257..2014481 /locus_tag="CMS_1896" /old_locus_tag="CMS1896" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710595.1" /db_xref="GI:170782262" /db_xref="GeneID:6157622" /translation="MEIRIGLVNTARELSFSTKQTPEEVQRTVTDAVRDSSPFISFTD DKGATHLAVTAHLAYVELGSADAPRIGFVR" gene 2014493..2014780 /locus_tag="CMS_1897" /old_locus_tag="CMS1897" /db_xref="GeneID:6157623" CDS 2014493..2014780 /locus_tag="CMS_1897" /old_locus_tag="CMS1897" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710596.1" /db_xref="GI:170782263" /db_xref="GeneID:6157623" /translation="MELLFVALFGALIGLVARYALPHRATHGALLVPAVGTIAAMVAW VALTWAGLRWDQGVIWIATLAISALVAAGVDIVVGRRRSSADARDLAAIGG" misc_feature order(2014502..2014555,2014574..2014633,2014661..2014729) /locus_tag="CMS_1897" /old_locus_tag="CMS1897" /note="3 probable transmembrane helices predicted for CMS1897 by TMHMM2.0 at aa 4-21, 28-47 and 57-79" gene complement(2014857..2015585) /locus_tag="CMS_1898" /old_locus_tag="CMS1898" /db_xref="GeneID:6157624" CDS complement(2014857..2015585) /locus_tag="CMS_1898" /old_locus_tag="CMS1898" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710597.1" /db_xref="GI:170782264" /db_xref="GeneID:6157624" /translation="MLKMFGRRSTTIEAPRVRSRGESKRRSQATTVSVDDFSPDTLRF LGAVAYLQLTVFETLSRAVTEAPDLAGKEAVSTAAGIALGKHQALAAEIKRQDGDPSV VMEPHRAAFDRFTATVAGADWYECLLSAYITTGLLDDFFVRLASGLPSDQRQRVVVLL SSGVGQQGIVDAVRAGIRRDPRLASRLAMWGRRLVGDTLLVAGTAMRASLADPDDARV HLEPVFAGIITAHTRRMDALGLTA" gene 2015726..2017288 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /db_xref="GeneID:6157625" CDS 2015726..2017288 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /codon_start=1 /transl_table=11 /product="putative ATP-dependent RNA helicase" /protein_id="YP_001710598.1" /db_xref="GI:170782265" /db_xref="GeneID:6157625" /translation="MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQ AKTGTGKTFGFGLPLIQRLGLTPEPGVQALVVVPTRELAVQVTEDLQIATKHRATTVV SIYGGKAYEGQIEQLKAGAQIVVGTPGRLLDLVGQRLLSLKYVREMVLDEADKMLDLG FLSDIEKLFAQTPAVRHTMLFSATMPGPIVALARRFMTKPIHIRATDPDEGLMQANIR HLVYRAHNMDKDEVIGRILQAEGRGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDL NQEQRERAMAAFKAGKKDILIATDVAARGIDVLDVTHVINHTIPEDDKAYLHRVGRTG RAGKTGIAVTFVDWDDLHKWALINRALEFGQPEPTETYSSSPHLFTDLDIPAGSKGRL RATPTVNPDGTPRERPGSRGGDSGRDGGRGGSRDGGRGGDRGGDRSGGRSSSSSSTST SSGGGDRDRSRSRSTSTASATAPADATATIGSEQPNTAGGHDAPHADGQTRPRSRNRR RRSGGDRPTATS" misc_feature 2015795..2016304 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 6.5e-57" misc_feature 2015858..2015881 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2016170..2016196 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /note="PS00039 DEAD-box subfamily ATP-dependent helicases signature." misc_feature 2016506..2016736 /locus_tag="CMS_1899" /old_locus_tag="CMS1899" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 8.9e-34" gene 2017386..2018348 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /db_xref="GeneID:6157626" CDS 2017386..2018348 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710599.1" /db_xref="GI:170782266" /db_xref="GeneID:6157626" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 2017458..2017523 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 2017523..2017644 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 2017644..2017709 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 2017794..2018336 /locus_tag="CMS_1900" /old_locus_tag="CMS1900" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(2018456..2019331) /locus_tag="CMS_1901" /old_locus_tag="CMS1901" /db_xref="GeneID:6157627" CDS complement(2018456..2019331) /locus_tag="CMS_1901" /old_locus_tag="CMS1901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710600.1" /db_xref="GI:170782267" /db_xref="GeneID:6157627" /translation="MPEEQQGPIDLHTHSSVSDGTETPVELAAQAAAQGLSAVALTDH DSTAGWADASDAALAHGITLVPGMEMSTQLEYASVHVLAYLFDPEDADLAAMTARVRS ERMTRAEAMVGRISRDYDLTWADVLAQTTPGSTIGRPHIADALVARGHVPTRTAAFEC ILHWQGGYYRPHYAPDPILGVELITAAGGLAVLAHPGARGPERVLSDSRMTALVAAGL FGLEVRHRDNPPASRVRLTELAERFGLEVTGSSDYHGAGKPNRLAENTTEPAVLARIV ERATGWAPVVPVPAV" misc_feature complement(2019116..2019307) /locus_tag="CMS_1901" /old_locus_tag="CMS1901" /inference="protein motif:HMMPfam:PF02231" /note="HMMPfam hit to PF02231, Phosphoesterase PHP,N-terminal, score 1e-21" gene 2019413..2020451 /locus_tag="CMS_1902" /old_locus_tag="CMS1902" /pseudo /db_xref="GeneID:6157628" gene 2020454..2022151 /locus_tag="CMS_1903" /old_locus_tag="CMS1903" /db_xref="GeneID:6157629" CDS 2020454..2022151 /locus_tag="CMS_1903" /old_locus_tag="CMS1903" /codon_start=1 /transl_table=11 /product="putative Xaa-Pro aminopeptidase" /protein_id="YP_001710601.1" /db_xref="GI:170782268" /db_xref="GeneID:6157629" /translation="MLGRPRSADPARPTRVRAARRWDDRRMAENTDTASEIAPAEIAA DPAAPLATTETAAPVVSAPGSGDAPVPRATSNRSTTPASTAFSDFVSTNWAEREEVDP PAREQAPFAADRRRRLSALHVGTRLVIPAGRLKQRSNDTDYPFRAHSAFAHLTGWGAD SEPGAVLVLEPVAEGSAADGSAHDATLYFRERAGRDSDEFYANAEIGEFWIGPRPSLR QVAADLGIATAPLADVDAAIAAAGPVRVIREADPALAARVDEARAGASSGSDGDASDP ADGDALLARDTSELRLIKDEYEIRQMREAVDTTGRGFSDVIADMPAVLAHARGERVVE GVFNARARADGNAVGYDTIAASGPHACILHWTRNDGRVVPGDLILIDAGVELDSLYTA DITRTLPVSGTFTDVQREVYEAVREAADAALAIVRPGIRFREVHAAAMEVIARKAADW GMLPVTAEEALEADNQHHRRYMVHGTSHHLGLDVHDCAQARRDMYIDGIVEAGMVFTI EPGLYFQPDDLTVPERFRGIGVRIEDDILVTRDGAENLSAGIPRTADEVEAWMAGRA" misc_feature 2020769..2021218 /locus_tag="CMS_1903" /old_locus_tag="CMS1903" /inference="protein motif:HMMPfam:PF05195" /note="HMMPfam hit to PF05195, Peptidase M24B, X-Pro dipeptidase/aminopeptidase N-terminal, score 1.6e-17" misc_feature 2021351..2022097 /locus_tag="CMS_1903" /old_locus_tag="CMS1903" /inference="protein motif:HMMPfam:PF00557" /note="HMMPfam hit to PF00557, Peptidase M24, score 8.7e-64" misc_feature 2021873..2021911 /locus_tag="CMS_1903" /old_locus_tag="CMS1903" /note="PS00491 Aminopeptidase P and proline dipeptidase signature." gene complement(2022209..2022874) /locus_tag="CMS_1904" /old_locus_tag="CMS1904" /db_xref="GeneID:6157630" CDS complement(2022209..2022874) /locus_tag="CMS_1904" /old_locus_tag="CMS1904" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710602.1" /db_xref="GI:170782269" /db_xref="GeneID:6157630" /translation="MTNPLLGRPSRANMPKLPKGEPVATYETYDEAQKAVVTLAEADF PVTQVSIVGNELTSVERVTGKLTSARAAVAGAASGAWLGLFLGLVTFLFSPVPNISFV VGAVIIGVGFGAIYGIVSYSITRRRRDFTSVMQVTATSYSVVVDPDSLHRARNVLGIG GVGTSVYGEPVVTPPAAPPVSRPVGPYGERVPEAGGSDAPEPTAPPTSTDRPVGEQGA TGA" misc_feature complement(order(2022515..2022583,2022596..2022664)) /locus_tag="CMS_1904" /old_locus_tag="CMS1904" /note="2 probable transmembrane helices predicted for CMS1904 by TMHMM2.0 at aa 58-80 and 85-107" gene 2022979..2024280 /locus_tag="CMS_1905" /old_locus_tag="CMS1905" /db_xref="GeneID:6157631" CDS 2022979..2024280 /locus_tag="CMS_1905" /old_locus_tag="CMS1905" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710603.1" /db_xref="GI:170782270" /db_xref="GeneID:6157631" /translation="MFDPAGDRVGRVRDVLVVYRKDDPPRVVGLIVEIPGKRRVFLSI GRVTSIGSGQIITTGLINLRRFEQRGGEVRVIAEILGRRVSMRDGSGTAVIEDVAIEE SGQAEWEVSQLFCRRPRTSPSPFAKGATIFATWEEVAELQDDGVAQSASQFLAAYSDL LPADLANTLLDLPQARRLEVAEELPDARLADVLEEMPESQQVEIMATLDDDRAADVLD QMQPDDAADLIAQLSEERGEALLELMQPEEADDVRMLLSYAPDTAGGLMTTDPVIVSG DATVAEGLALIRRHELAPTLGAAVCVTLPPYEPPTGRFLGMVHFQRMLRYPPHERLGT LLDQGLEPVRADTSAAEVSRIMASYNLVSVPVVDENHRLVGVVTIDDVLDHLLPDDWR SADAERETRKRATARFHGTATAAIPTAGPARGRRIPRGTAE" misc_feature 2023381..2023767 /locus_tag="CMS_1905" /old_locus_tag="CMS1905" /inference="protein motif:HMMPfam:PF03448" /note="HMMPfam hit to PF03448, MgtE intracellular region,score 4e-23" misc_feature 2023771..2023962 /locus_tag="CMS_1905" /old_locus_tag="CMS1905" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 0.035" misc_feature 2023978..2024139 /locus_tag="CMS_1905" /old_locus_tag="CMS1905" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 5.8e-11" gene 2024264..2024815 /locus_tag="CMS_1906" /old_locus_tag="CMS1906" /db_xref="GeneID:6157632" CDS 2024264..2024815 /locus_tag="CMS_1906" /old_locus_tag="CMS1906" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710604.1" /db_xref="GI:170782271" /db_xref="GeneID:6157632" /translation="MARQSNRDVRLDAPKGLRTTVLPMRNRASRDRFGRFTESIARGM GTPWFLVGLTLFCVAWIGYNTYGPESARFDSAALGFTALTLILSLQASYAAPLILLAQ NRQDDRDRVQIEQDRQRAERNVADVEYLAREVVSLRLQMKDVASKDFIRAELRQLLEE LDRRDDPEADDAEGAGSRRTHGR" misc_feature 2024339..2024722 /locus_tag="CMS_1906" /old_locus_tag="CMS1906" /inference="protein motif:HMMPfam:PF06210" /note="HMMPfam hit to PF06210, Protein of unknown function DUF1003, score 7.2e-30" misc_feature order(2024384..2024452,2024495..2024563) /locus_tag="CMS_1906" /old_locus_tag="CMS1906" /note="2 probable transmembrane helices predicted for CMS1906 by TMHMM2.0 at aa 41-63 and 78-100" gene 2024805..2025980 /locus_tag="CMS_1907" /old_locus_tag="CMS1907" /db_xref="GeneID:6157633" CDS 2024805..2025980 /locus_tag="CMS_1907" /old_locus_tag="CMS1907" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001710605.1" /db_xref="GI:170782272" /db_xref="GeneID:6157633" /translation="MAAEVPGAEALTTEAIRRALARVVDPEIRHPIIELDMVSNVRVE DGGVAHVDIALTIVGCPAATSIERDVRETVEAVPGVARLELTVGVMSPERRRALTERL RGPAAQRGVPFGPDSLTRVYAVTSGKGGVGKSTLTANLAVALAAKGLAVGLVDADVHG FSIPGILGLVDADGRTAQPTRVGDMILPPVAHGVKVISIGMFLDPDATGGTAVSWRGP MLHRTIQQFLTDVFFGDLDVLLLDLPPGTGDVAITVGQLLPHAEVLVVTTPQPAAADV AERSGLVARQTGQRVAGVVENMAGFAQADGSVLELFGAGGGEEVARRLSAGQEASVPL LASVPLSMALRQGGDTGAPLVLAAPTDPAAVQILRVADHLATRGRGLAGRRLGLSVS" misc_feature 2024838..2025065 /locus_tag="CMS_1907" /old_locus_tag="CMS1907" /inference="protein motif:HMMPfam:PF01883" /note="HMMPfam hit to PF01883, Protein of unknown function DUF59, score 6e-23" misc_feature 2025183..2025206 /locus_tag="CMS_1907" /old_locus_tag="CMS1907" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2026099..2026308 /locus_tag="CMS_1908" /old_locus_tag="CMS1908" /db_xref="GeneID:6157634" CDS 2026099..2026308 /locus_tag="CMS_1908" /old_locus_tag="CMS1908" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710606.1" /db_xref="GI:170782273" /db_xref="GeneID:6157634" /translation="MRVGIARYPSRAVTTTVPAMAETERAAMAMRKTVMVVLLREGGW RRIPPHLHGTIAERSGQAHSPCLVV" gene 2026369..2027235 /locus_tag="CMS_1909" /old_locus_tag="CMS1909" /db_xref="GeneID:6157635" CDS 2026369..2027235 /locus_tag="CMS_1909" /old_locus_tag="CMS1909" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_001710607.1" /db_xref="GI:170782274" /db_xref="GeneID:6157635" /translation="MGAVARAAGRTPSAVSQQLKVLEREAGVPLTERSGRGIVLTDAG RALARTATDIAVAVARAEALWEDFRHQPSGEVTLATFPTAAQMLLPGLLDRVAGIPDL TLRASDRDPASRAFADLTADFDVVIAHSLAGAGTWRGLGLVIVPLMVEPLDVAMPADH RLAARASVSPADLSGEPWIGVPQGLPFDRILLDIEQAVGAPARVVQRFSDTRITESLV ASGHGIALLPRYTAGSYEGVVVKRLSGVASKRHLHVLLRPDRAERPSVRAVVDALREE AKAVDARFSGNG" misc_feature 2026369..2026503 /locus_tag="CMS_1909" /old_locus_tag="CMS1909" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 2.9e-09" misc_feature 2026573..2027202 /locus_tag="CMS_1909" /old_locus_tag="CMS1909" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 5.6e-36" gene complement(2027274..2027648) /gene="tatB" /locus_tag="CMS_1910" /old_locus_tag="CMS1910" /db_xref="GeneID:6157636" CDS complement(2027274..2027648) /gene="tatB" /locus_tag="CMS_1910" /old_locus_tag="CMS1910" /codon_start=1 /transl_table=11 /product="sec-independent protein translocase" /protein_id="YP_001710608.1" /db_xref="GI:170782275" /db_xref="GeneID:6157636" /translation="MFGLTFEKLMLIGIIAVFLLGPERLPIYTQKLADLVKAARRMAT GARERMRDELGPEFDEVDWKKLDPRQYDPRRIIKEALFEDEPVVTKPRVPVETTIARR QRLEREAAAASAQPAPFDAEAT" gene 2027800..2028432 /locus_tag="CMS_1911" /old_locus_tag="CMS1911" /db_xref="GeneID:6159008" CDS 2027800..2028432 /locus_tag="CMS_1911" /old_locus_tag="CMS1911" /codon_start=1 /transl_table=11 /product="putative O-methyltransferase" /protein_id="YP_001710609.1" /db_xref="GI:170782276" /db_xref="GeneID:6159008" /translation="MSDQETGWKFAEDVVVEDEHIALARQHSRELGIEAVSPAVGAQL SLLAAATRATSVIEIGTGAGVSGLCIFRGAPRAVLTSIDVEFDHQQAAREILADAEVP ANRVRLITGRALDVLPRMSDASYDLVLVDADPGQVIEYVEHGLRLARTGGLVLVPHAL WRGRVQNPAARDAQTAAFRTLVQETAGSGAVVASLSPAGDGLLQIAKTGR" misc_feature 2027833..2028423 /locus_tag="CMS_1911" /old_locus_tag="CMS1911" /inference="protein motif:HMMPfam:PF01596" /note="HMMPfam hit to PF01596, O-methyltransferase, family 3, score 2.8e-10" gene complement(2028542..2029504) /locus_tag="CMS_1912" /old_locus_tag="CMS1912" /db_xref="GeneID:6157637" CDS complement(2028542..2029504) /locus_tag="CMS_1912" /old_locus_tag="CMS1912" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710610.1" /db_xref="GI:170782277" /db_xref="GeneID:6157637" /translation="MTHANAPFAPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPGRTSRRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature complement(2028566..2029108) /locus_tag="CMS_1912" /old_locus_tag="CMS1912" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" misc_feature complement(2029367..2029432) /locus_tag="CMS_1912" /old_locus_tag="CMS1912" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" gene complement(2029601..2029774) /locus_tag="CMS_1913" /old_locus_tag="CMS1913" /db_xref="GeneID:6157638" CDS complement(2029601..2029774) /locus_tag="CMS_1913" /old_locus_tag="CMS1913" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710611.1" /db_xref="GI:170782278" /db_xref="GeneID:6157638" /translation="MAAMKPRTGDGPMEAVKEGRLIIVRVPLEGGGRLVVSVNDAEAK ELHDALAAVTSAG" gene complement(2029922..2031154) /locus_tag="CMS_1914" /old_locus_tag="CMS1914" /db_xref="GeneID:6157639" CDS complement(2029922..2031154) /locus_tag="CMS_1914" /old_locus_tag="CMS1914" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710612.1" /db_xref="GI:170782279" /db_xref="GeneID:6157639" /translation="MADGALTRPVGRPAPLDLPDARPAGRLPWWAAVLGVYALSRVLT TVLMLISARSQIRTPWASASPSYLQYATFWDAGWYRDIATFGYPTVLPVDAAGHVQSN PWAFLPVYPAIVRAIQDATGAPFDVAAVAVSVIAGGGAVLVLHRLLSRFLSPSSTLTA VVIVCVAPVSPLFQIAYAESLQTLLLVTALLLLVERRYVLLAPVVVVMAFTRPLGLAF ALALVLHGAHRIATARRDPFPPAERARLVLATTAAVASGAAWPVIAWIRTGSFTAYTD TELSWRAAYVGYRHLVPFEAWFDAGDVWIGGIAGTVAVLLAVAAFVLVLLRPSVRALG PDLRIWIASYGLYLFAVFFPQSSVFRLLLPMIPLAGALAVPRARAYRVAVVVAMVVGQ WIWIDVFWRATAGDWTPP" misc_feature complement(order(2029943..2030011,2030030..2030083, 2030093..2030146,2030180..2030248,2030357..2030425, 2030486..2030554,2030621..2030689,2030708..2030776, 2030999..2031067)) /locus_tag="CMS_1914" /old_locus_tag="CMS1914" /note="9 probable transmembrane helices predicted for CMS1914 by TMHMM2.0 at aa 30-52, 127-149, 156-178,201-223, 244-266, 303-325, 337-354, 358-375 and 382-404" gene complement(2031136..2032242) /gene="dapE" /locus_tag="CMS_1915" /old_locus_tag="CMS1915" /db_xref="GeneID:6157640" CDS complement(2031136..2032242) /gene="dapE" /locus_tag="CMS_1915" /old_locus_tag="CMS1915" /EC_number="3.5.1.18" /note="catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /protein_id="YP_001710613.1" /db_xref="GI:170782280" /db_xref="GeneID:6157640" /translation="MIRMPTETPPVPELDLTAGSVEVTRAICDIESVSGDEATLADAI ERALAGCAHLELERDGDAVVARTRLGRDRRVVIAGHIDTVPLNRNLPTRTEHDDGVEF LWGRGTVDMKAGVAVQLVLAAELADPAYDITWIWYDHEEVSDSLNGLGRLARTRPELL EGDFAILGEPTRAEIEGGCNGNLRVEVRAFGKRSHSARSWVGENAIHRIAPVLDVLAA YEAREVEVDGLVYREGLNAVGVSGGIAGNVIPDEAMVHVNYRFAPSRSGAEAVEHVRG LFPGFEVTVVDLAEGARPGLDAEIAQPFLAAVGGEARPKYGWTDVARFSALGIPAVNY GPGDPLLAHHDDERVDVTQIVSCERGLRAWLTAR" misc_feature complement(2031142..2032017) /gene="dapE" /locus_tag="CMS_1915" /old_locus_tag="CMS1915" /inference="protein motif:HMMPfam:PF01546" /note="HMMPfam hit to PF01546, Peptidase M20, score 9.6e-15" misc_feature complement(2031385..2031714) /gene="dapE" /locus_tag="CMS_1915" /old_locus_tag="CMS1915" /inference="protein motif:HMMPfam:PF07687" /note="HMMPfam hit to PF07687, Peptidase dimerisation domain, score 1e-10" gene 2032416..2033312 /locus_tag="CMS_1916" /old_locus_tag="CMS1916" /db_xref="GeneID:6158654" CDS 2032416..2033312 /locus_tag="CMS_1916" /old_locus_tag="CMS1916" /codon_start=1 /transl_table=11 /product="putative transferase" /protein_id="YP_001710614.1" /db_xref="GI:170782281" /db_xref="GeneID:6158654" /translation="MLDTWFPAPELRSLPAGRDRWIAPAWIEELAVADPRRGVTIDIV TVEIDLQTPPTSTPDAYLRLHLLSHLLVAPNTIALDGIFGHLPIVVWTNAGPVHPDDF DRLRPALQRAGIAAHGIDKFPRLLDYVTPDRVRIADASRVRLGAHLAPGTTVMHEGFV NFNAGTLGSSMVEGRITQGVVVGDGSDIGGGASIMGTLSGGGTQRVVIGERALLGANS GVGISIGDDSVVEAGLYVTAGTKVRLAGEAPGPDGTVPQVKAVELSGRPGILFRRNSL TGAVEAVPRRVGGSILNEALHA" misc_feature 2032950..2033003 /locus_tag="CMS_1916" /old_locus_tag="CMS1916" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 0.36" misc_feature 2033028..2033081 /locus_tag="CMS_1916" /old_locus_tag="CMS1916" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 24" gene complement(2033349..2034122) /locus_tag="CMS_1917" /old_locus_tag="CMS1917" /db_xref="GeneID:6157641" CDS complement(2033349..2034122) /locus_tag="CMS_1917" /old_locus_tag="CMS1917" /codon_start=1 /transl_table=11 /product="putative protein phosphatase" /protein_id="YP_001710615.1" /db_xref="GI:170782282" /db_xref="GeneID:6157641" /translation="MLGWASMTDRGLRRDHNEDSVLAAVPYFAVADGMGGHAAGDVAS DAVIRRLAEEQELADSGFADPEGVEPALDLAVGDIREETGDLELHAGTTVTGACLTLV SDRPYWAVFNVGDSRVYQLRGDVLEQVTVDHSVVQEMVDAGRITRAQADRHPDGNIIT RAVGVGDAAEADYWLLPVTARLRLLVCSDGLTKELADAEIRGHLLRADDAATAVRDLV VHALENGGRDNVTAIVVDVLRIDPPADAPAVPRRRGLRR" misc_feature complement(2033433..2034116) /locus_tag="CMS_1917" /old_locus_tag="CMS1917" /inference="protein motif:HMMPfam:PF00481" /note="HMMPfam hit to PF00481, Protein phosphatase 2C-like, score 2.6e-05" gene complement(2034182..2035243) /locus_tag="CMS_1918" /old_locus_tag="CMS1918" /db_xref="GeneID:6157642" CDS complement(2034182..2035243) /locus_tag="CMS_1918" /old_locus_tag="CMS1918" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710616.1" /db_xref="GI:170782283" /db_xref="GeneID:6157642" /translation="MLLPAGAPAGIVDDLWRIVADPAATAEAIVAALPLRGADEVASF AVIVHEAAGPEGARLQVVLRGDAVVDADVDGAADPRRVDARRAQPFYLATLDRVRAYR AYRAGRADVEADASADRTGGLPLIAGAVAADAVHWRLGDPRPSDARSGEPARPADRRD APPSGRCAAVPTVDPGLVATVLDGPADPVGRTGAPDARDAAARAGSAGVPTVAMPTAP ATHEDADADAPRVVPAFRVLHDGVPHGDADVPDRIPLDVPAVVGRRPRPPRVIRGAAP RLVAVPSPLGEISGTHLGIRQDSGVVVVTDLDSTNGTVVLAPGAERLALRPGESLVVV PGTRIDIGDGVVLEILSAR" misc_feature complement(2034941..2034970) /locus_tag="CMS_1918" /old_locus_tag="CMS1918" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." gene 2035553..2036032 /locus_tag="CMS_1919" /old_locus_tag="CMS1919" /db_xref="GeneID:6157643" CDS 2035553..2036032 /locus_tag="CMS_1919" /old_locus_tag="CMS1919" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_001710617.1" /db_xref="GI:170782284" /db_xref="GeneID:6157643" /translation="MSTPQRPSARGLPIDAISRSIVDQLREDGRRSYAEIGKAVGLSE AAVRQRVQKLTDAGVIRIVALTDPQQLGLTRQAMIGVTVSGDVRVVADALAAIPAVDY VVMTAGTFDLLAEVVCEDDDELVELLNARIRGLEGVVSTETFVYPKVHTQDGHGRSR" misc_feature 2035643..2035708 /locus_tag="CMS_1919" /old_locus_tag="CMS1919" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 31-52, sequence RSYAEIGKAVGLSEAAVRQRVQ" misc_feature 2035646..2035726 /locus_tag="CMS_1919" /old_locus_tag="CMS1919" /note="PS00519 Bacterial regulatory proteins, asnC family signature." misc_feature 2035664..2035960 /locus_tag="CMS_1919" /old_locus_tag="CMS1919" /inference="protein motif:HMMPfam:PF01037" /note="HMMPfam hit to PF01037, Bacterial regulatory proteins, AsnC/Lrp, score 3.5e-14" gene 2036139..2036759 /locus_tag="CMS_1920" /old_locus_tag="CMS1920" /db_xref="GeneID:6157644" CDS 2036139..2036759 /locus_tag="CMS_1920" /old_locus_tag="CMS1920" /codon_start=1 /transl_table=11 /product="putative methylated-DNA--protein-cysteine methyltransferase" /protein_id="YP_001710618.1" /db_xref="GI:170782285" /db_xref="GeneID:6157644" /translation="MTPSSAPAVAPARRPASPPRDGRPAPAAPDADPGCALAPAAGTL PHGAALLRVPSPVGRLELVAEGDRVVALSIATVGVLPLDHLDDRPTPVLAETARQLDE YFAGRRTSFEVPVRLTGTPFQVAVWEALARVPHGGVTTYGALAQAAGRPSGARAVGGA VGANRLCILVPCHRVLGSDGRVTGFSAGDGVATKVGLLALEGSVLS" misc_feature 2036283..2036489 /locus_tag="CMS_1920" /old_locus_tag="CMS1920" /inference="protein motif:HMMPfam:PF02870" /note="HMMPfam hit to PF02870, Methylguanine DNA methyltransferase, ribonuclease-like, score 0.00023" misc_feature 2036493..2036756 /locus_tag="CMS_1920" /old_locus_tag="CMS1920" /inference="protein motif:HMMPfam:PF01035" /note="HMMPfam hit to PF01035,Methylated-DNA-[protein]-cysteine S-methyltransferase,score 9.4e-32" misc_feature 2036646..2036666 /locus_tag="CMS_1920" /old_locus_tag="CMS1920" /note="PS00374 Methylated-DNA--protein-cysteine methyltransferase active site." gene 2036774..2037349 /gene="tag" /locus_tag="CMS_1921" /old_locus_tag="CMS1921" /db_xref="GeneID:6157645" CDS 2036774..2037349 /gene="tag" /locus_tag="CMS_1921" /old_locus_tag="CMS1921" /EC_number="3.2.2.20" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosylase I" /protein_id="YP_001710619.1" /db_xref="GI:170782286" /db_xref="GeneID:6157645" /translation="MLGDDGVARCAWSAGDTEYRRYHDEEWGRPLHGDRPLFEKLCLE GFQAGLSWISILRKRPHFREVFHGFDVDAVAAMDDGDVERLMGDAGIIRNRAKILAAA GNARAVRALVDEHGDGALDRMIWAHAPDPLTRSRPATADEIPAVTPESTALSRELKAH GLRFVGPTTVYALMQSSGLVDDHVVGCHRAA" misc_feature 2036807..2037343 /gene="tag" /locus_tag="CMS_1921" /old_locus_tag="CMS1921" /inference="protein motif:HMMPfam:PF03352" /note="HMMPfam hit to PF03352, Methyladenine glycosylase,score 2e-89" gene complement(2037361..2038116) /locus_tag="CMS_1922" /old_locus_tag="CMS1922" /db_xref="GeneID:6159005" CDS complement(2037361..2038116) /locus_tag="CMS_1922" /old_locus_tag="CMS1922" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710620.1" /db_xref="GI:170782287" /db_xref="GeneID:6159005" /translation="MLVLLPPSETKRDGGTEGSHLDLDLLAFPELTEERRTVVRAVAD LARDPEAAARALKLGPRQAAEVERNRVLETSPTMPALRRYTGVLYDPIGADSLDPAQL AFAGRHVAVHSALLGPVRATDPIPAYRLSHDSRVPGLRMKAHWVASVRRVLEGIPGLV LDLRSEGYAALGPRPGHEDSAVVRVVARGADGTVRALNHFNKKAKGELVRDLILAGRD LGSVAELLDWAAGTGIELSRGDTGELVLVAAPH" misc_feature complement(2037367..2038116) /locus_tag="CMS_1922" /old_locus_tag="CMS1922" /inference="protein motif:HMMPfam:PF03883" /note="HMMPfam hit to PF03883, Protein of unknown function DUF328, score 3.9e-07" gene complement(2038228..2038497) /gene="atpC" /locus_tag="CMS_1923" /old_locus_tag="CMS1923" /db_xref="GeneID:6157646" CDS complement(2038228..2038497) /gene="atpC" /locus_tag="CMS_1923" /old_locus_tag="CMS1923" /EC_number="3.6.3.14" /note="produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit epsilon" /protein_id="YP_001710621.1" /db_xref="GI:170782288" /db_xref="GeneID:6157646" /translation="MARADLTVTVVSADQQVWSGQASMVVARTSEGEIGILAGHEPLL AILATGNVRITQDGGAVITADADEGFLSVENDNVTVVARKAALVA" misc_feature complement(2038237..2038485) /gene="atpC" /locus_tag="CMS_1923" /old_locus_tag="CMS1923" /inference="protein motif:HMMPfam:PF02823" /note="HMMPfam hit to PF02823, H+-transporting two-sector ATPase, delta/epsilon subunit, score 3.2e-18" gene complement(2038499..2039959) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /db_xref="GeneID:6158618" CDS complement(2038499..2039959) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /EC_number="3.6.3.14" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit beta" /protein_id="YP_001710622.1" /db_xref="GI:170782289" /db_xref="GeneID:6158618" /translation="MTDTATRPVASDSVAGVGRIVRVTGPVVDIEFPHDSIPPVYNAL KTTITIGEDSTEITLEIALHLGDDVVRAIALKPTDGLVRGQEVRDTGAAISVPVGDIT KGKVFNVTGDILNNEGGEPIEITERWPIHRKPPMFDQLESKTQLFETGIKVIDLLTPY VQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIMEMEEAG VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEV STLLGRMPSAVGYQPNLADEMGVLQERITSTRGHSITSLQAIYVPADDYTDPAPATTF AHLDATTELSREIASRGLYPAVDPLTSTSRILDPRYLGQAHYDTATRVKAILQKNKEL QEIIAILGVDELSEEDKVTVSRARRIQQFLSQNTYMAKKFTGVEGSTVPLKNTIESFS KIADGDYDHVAEQAFFNVGDLDDVERRWSEIQKENG" misc_feature complement(2038511..2038834) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /inference="protein motif:HMMPfam:PF00306" /note="HMMPfam hit to PF00306, H+-transporting two-sector ATPase, alpha/beta subunit, C-terminal, score 1.1e-36" misc_feature complement(2038871..2039515) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /inference="protein motif:HMMPfam:PF00006" /note="HMMPfam hit to PF00006, H+-transporting two-sector ATPase, alpha/beta subunit, central region, score 1.4e-91" misc_feature complement(2038871..2038900) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /note="PS00152 ATP synthase alpha and beta subunits signature." misc_feature complement(2039429..2039452) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2039687..2039902) /gene="atpD" /locus_tag="CMS_1924" /old_locus_tag="CMS1924" /inference="protein motif:HMMPfam:PF02874" /note="HMMPfam hit to PF02874, H+-transporting two-sector ATPase, alpha/beta subunit, N-terminal, score 6.1e-24" gene complement(2039995..2040894) /gene="atpG" /locus_tag="CMS_1925" /old_locus_tag="CMS1925" /db_xref="GeneID:6158619" CDS complement(2039995..2040894) /gene="atpG" /locus_tag="CMS_1925" /old_locus_tag="CMS1925" /EC_number="3.6.3.14" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit gamma" /protein_id="YP_001710623.1" /db_xref="GI:170782290" /db_xref="GeneID:6158619" /translation="MGAQLRVYTQKIKSAQTTKKITRAMELISASRIQKAQQRMAASA PYSRAVTRAVSAVATFSNVDHILTTEPEKVERAAIVIFASDRGLAGAFSSSVLKESEQ LAELLRSQGKEIVYYLVGRKAVGYFKFRKRDSERIWTGSTEKPEFETAKSIGDALVEK FVTPASEGGVDEIHIVFNRFVSIATQKPEVVRLLPLEVVEGVEAPVEGAVLPLYEFEP EVGDVLDALLPVYIESRIFNAMLQSAASEHAARQKAMKSASDNADKLVTTYTRLRNNA RQTEITQQISEIVGGADALASSK" misc_feature complement(2040010..2040888) /gene="atpG" /locus_tag="CMS_1925" /old_locus_tag="CMS1925" /inference="protein motif:HMMPfam:PF00231" /note="HMMPfam hit to PF00231, H+-transporting two-sector ATPase, gamma subunit, score 3.4e-93" gene complement(2040944..2042602) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /db_xref="GeneID:6158622" CDS complement(2040944..2042602) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /EC_number="3.6.3.14" /note="produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit alpha" /protein_id="YP_001710624.1" /db_xref="GI:170782291" /db_xref="GeneID:6158622" /translation="MNAKGKKMAELSISPDEIRDALKDFVQSYEPGKASTTEVGYVLD AGDGIAHVQGLPGVMANELITFADGTLGLAQNLEESEIGVIVLGEFAGIEEGMEVRRT GEVLSVPVGDGYLGRVVDPLGNPIDGQGEIANEGRRALELQAPGVMQRKSVHEPMQTG IKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDTNKQVRCIYVAIG QKGSTIASVRGALEEAGAMEYTTIVASPASDPAGFKYLAPYTGSAIGQHWMYGGKHVL IIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSMTG LPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGDAQVK SIKKVSGTLKLELAQYRSLEAFAIFASDLDAASRRQLARGARLTELLKQPQYSPFPIE EQVVSIWAGTKGKLDEVPVEDILRFERELLDHLHRNTEVLSQLKEKNVLTDDIIDAMD KAVDRFKLEFQTGEGKPLASVGSEKFEPAKAEDVNQEQIVKGKR" misc_feature complement(2041115..2041420) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /inference="protein motif:HMMPfam:PF00306" /note="HMMPfam hit to PF00306, H+-transporting two-sector ATPase, alpha/beta subunit, C-terminal, score 1.2e-33" misc_feature complement(2041454..2042128) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /inference="protein motif:HMMPfam:PF00006" /note="HMMPfam hit to PF00006, H+-transporting two-sector ATPase, alpha/beta subunit, central region, score 2.6e-106" misc_feature complement(2041454..2041483) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /note="PS00152 ATP synthase alpha and beta subunits signature." misc_feature complement(2042042..2042065) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2042294..2042500) /gene="atpA" /locus_tag="CMS_1926" /old_locus_tag="CMS1926" /inference="protein motif:HMMPfam:PF02874" /note="HMMPfam hit to PF02874, H+-transporting two-sector ATPase, alpha/beta subunit, N-terminal, score 5e-18" gene complement(2042637..2043428) /gene="atpH" /locus_tag="CMS_1927" /old_locus_tag="CMS1927" /db_xref="GeneID:6158616" CDS complement(2042637..2043428) /gene="atpH" /locus_tag="CMS_1927" /old_locus_tag="CMS1927" /EC_number="3.6.3.14" /note="produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit delta" /protein_id="YP_001710625.1" /db_xref="GI:170782292" /db_xref="GeneID:6158616" /translation="MGSASRASLDSARRVLAELGGVDLSTAGQLLGAGRAIGGSTHLL SALADTGIAPEVKHSIVDRVFGATVQEPTLRVLRAVVDGRWSSHDELLAGIEELGIRA VAISAPEGTPVESELFTFGRAVSTDDGLELAFGDKLGDPEAKSTLVHRLLDGRASEQT VVIVEQLVQQPRGRRIGELVRHAATLVADQAGLTIATVSVASPLSPEQSERLAQALSR RYSRRIELNQVVDRDLVGGLRVQIGDDVIDGSVATRINDLRLQFA" misc_feature complement(2042643..2043146) /gene="atpH" /locus_tag="CMS_1927" /old_locus_tag="CMS1927" /inference="protein motif:HMMPfam:PF00213" /note="HMMPfam hit to PF00213, H+-transporting two-sector ATPase, delta (OSCP) subunit, score 1.8e-06" misc_feature complement(2042700..2042759) /gene="atpH" /locus_tag="CMS_1927" /old_locus_tag="CMS1927" /note="PS00389 ATP synthase delta (OSCP) subunit signature." gene complement(2043428..2043973) /gene="atpF" /locus_tag="CMS_1928" /old_locus_tag="CMS1928" /db_xref="GeneID:6158623" CDS complement(2043428..2043973) /gene="atpF" /locus_tag="CMS_1928" /old_locus_tag="CMS1928" /EC_number="3.6.3.14" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel." /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit B" /protein_id="YP_001710626.1" /db_xref="GI:170782293" /db_xref="GeneID:6158623" /translation="MAAGEEAPSILLPAVYDIVWSAVVFVVLLVVIWKYALPRVYAML DGRTEAIAGGIEKAERAQAEADAAKAELTAQLVEARAEAGRIREQARVDASVIAAEIK EQATADAARITASGTQQIEAERQQAVVSLRSEVGSLAIDLASGVIGQSLADDQRSTAL VDRFLADLEASETAGRTGSAS" misc_feature complement(2043530..2043925) /gene="atpF" /locus_tag="CMS_1928" /old_locus_tag="CMS1928" /inference="protein motif:HMMPfam:PF00430" /note="HMMPfam hit to PF00430, H+-transporting two-sector ATPase, B/B' subunit, score 1.2e-26" misc_feature complement(2043878..2043946) /gene="atpF" /locus_tag="CMS_1928" /old_locus_tag="CMS1928" /note="1 probable transmembrane helix predicted for CMS1928 by TMHMM2.0 at aa 10-32" gene complement(2044006..2044239) /gene="atpE" /locus_tag="CMS_1929" /old_locus_tag="CMS1929" /db_xref="GeneID:6158621" CDS complement(2044006..2044239) /gene="atpE" /locus_tag="CMS_1929" /old_locus_tag="CMS1929" /EC_number="3.6.3.14" /codon_start=1 /transl_table=11 /product="ATP synthase C chain" /protein_id="YP_001710627.1" /db_xref="GI:170782294" /db_xref="GeneID:6158621" /translation="MDPIITAEITGNIATVGYGLAAIGPGIGVGIVAGKTVEAMARQP EMAGSLRTTMFLGIAFSEALALIGLATYFIFTN" misc_feature complement(2044012..2044212) /gene="atpE" /locus_tag="CMS_1929" /old_locus_tag="CMS1929" /inference="protein motif:HMMPfam:PF00137" /note="HMMPfam hit to PF00137, H+-transporting two-sector ATPase, C subunit, score 3.7e-17" misc_feature complement(order(2044015..2044083,2044144..2044212)) /gene="atpE" /locus_tag="CMS_1929" /old_locus_tag="CMS1929" /note="2 probable transmembrane helices predicted for CMS1929 by TMHMM2.0 at aa 10-32 and 53-75" misc_feature complement(2044054..2044119) /gene="atpE" /locus_tag="CMS_1929" /old_locus_tag="CMS1929" /note="PS00605 ATP synthase c subunit signature." gene complement(2044286..2044966) /gene="atpB" /locus_tag="CMS_1930" /old_locus_tag="CMS1930" /db_xref="GeneID:6158620" CDS complement(2044286..2044966) /gene="atpB" /locus_tag="CMS_1930" /old_locus_tag="CMS1930" /EC_number="3.6.3.14" /note="Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0" /codon_start=1 /transl_table=11 /product="F0F1 ATP synthase subunit A" /protein_id="YP_001710628.1" /db_xref="GI:170782295" /db_xref="GeneID:6158620" /translation="MLIRLLVMAVLVVLFVVGTRKLALVPGRGQNLVEMGVDFVRVNI AEDILGKKDGRRFLPIIMTIFFLVLGMDLTGVVPFLNIAGTSVIGLPLLLALVAYVTF IYAGIKDRGVMFFKNTLFPAGAPKPVYLLLTPIEFLSTFIIRPVALTLRLLMNMLVGH LLLVLCFSATWFFLFEAQGALKILGAGTLVLGFAFTLFELLVAVLQAYIFALLTAVYI QMAVAEEH" sig_peptide complement(2044286..2044351) /gene="atpB" /locus_tag="CMS_1930" /old_locus_tag="CMS1930" /note="Signal peptide predicted for CMS1930 by SignalP 2.0 HMM (Signal peptide probability 0.873) with cleavage site probability 0.295 between residues 22 and 23" misc_feature complement(2044307..2044807) /gene="atpB" /locus_tag="CMS_1930" /old_locus_tag="CMS1930" /inference="protein motif:HMMPfam:PF00119" /note="HMMPfam hit to PF00119, H+-transporting two-sector ATPase, A subunit, score 2.5e-25" misc_feature complement(order(2044331..2044399,2044442..2044510, 2044529..2044588,2044646..2044714,2044727..2044795, 2044910..2044963)) /gene="atpB" /locus_tag="CMS_1930" /old_locus_tag="CMS1930" /note="6 probable transmembrane helices predicted for CMS1930 by TMHMM2.0 at aa 2-19, 58-80, 85-107, 127-146,153-175 and 190-212" gene complement(2045302..2046264) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /db_xref="GeneID:6158617" CDS complement(2045302..2046264) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710629.1" /db_xref="GI:170782296" /db_xref="GeneID:6158617" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2045314..2045856) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 6.8e-38" misc_feature complement(2045941..2046006) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2046006..2046127) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2046127..2046192) /locus_tag="CMS_1931" /old_locus_tag="CMS1931" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 2046393..2047496 /locus_tag="CMS_1932" /old_locus_tag="CMS1932" /db_xref="GeneID:6157647" CDS 2046393..2047496 /locus_tag="CMS_1932" /old_locus_tag="CMS1932" /codon_start=1 /transl_table=11 /product="putative aldolase" /protein_id="YP_001710630.1" /db_xref="GI:170782297" /db_xref="GeneID:6157647" /translation="MDTVTDAASPVSPLRLHDTAARGFASDNYSGIHPEVLAAIAAAN DGHQVAYGGDAYTARLQEVVGEHFGRGAEAFPVFNGTGANVTGLLSMLPRWGAVICAT TAHINTDEGGAPERVAGIKLLQVPTEDGKLTPELIDREAWGWGDEHRAQPLAVSITQT TELGTVYTPAEVRAIADHAHERGMRLHMDGARLSNAAATLDAPFRAFTSDAGVDVVSF GGTKNGLLYGEAIVVLDPEASEGLTYLRKLNMQLASKMRFVSAQLLALLGSEVDGVPL YLRSARHANGMAARLRAALEGVDGVEFTQETQANGLFAILPEGVADRLRGEFRFYDWD PARREVRWMCSFDTTEDDIDRFATAIRREVGAG" misc_feature 2046459..2047343 /locus_tag="CMS_1932" /old_locus_tag="CMS1932" /inference="protein motif:HMMPfam:PF01212" /note="HMMPfam hit to PF01212, Tryptophanase, score 1.2e-60" misc_feature 2047636..2050579 /note="submitted with no further information" gene 2047826..2048815 /locus_tag="CMS_1933" /old_locus_tag="CMS1933" /db_xref="GeneID:6157648" CDS 2047826..2048815 /locus_tag="CMS_1933" /old_locus_tag="CMS1933" /codon_start=1 /transl_table=11 /product="putative phage resistance protein" /protein_id="YP_001710631.1" /db_xref="GI:170782298" /db_xref="GeneID:6157648" /translation="MEYAKPWLSIEDQIEGLSRRGLEVGDRREAGAILRNVGYYRLTG YLYPFRQSERYVDDDGRKRTRILSSYEPGVRMDDAAQLIDFDRELRMLVLEGVERIEI ALRMQLGYSLGQRSAFAHEDASAFLSAFTDPQMGEDGEPAPSRHEAWLERVRQRQNNS DEAFVAHFRHKYDDRMPIWALTEILELGHTSRLYGGLRNDIATEIAGAFGVPTKQLMQ SWIATINYVRNVAAHHSRLYNRKLVSALKRPKGNTVPLLAHLTQEEAPKQFGTYSALA VMAYVLETVHPGRDWAVRVAALLRNFPTTARLNVGSMGVAAGWIEQDLWKERA" misc_feature 2047838..2048536 /locus_tag="CMS_1933" /old_locus_tag="CMS1933" /inference="protein motif:HMMPfam:PF07751" /note="HMMPfam hit to PF07751, Abi-like protein, score 2.5e-51" gene complement(2050685..2053417) /gene="ppc" /locus_tag="CMS_1939" /old_locus_tag="CMS1939" /db_xref="GeneID:6157649" CDS complement(2050685..2053417) /gene="ppc" /locus_tag="CMS_1939" /old_locus_tag="CMS1939" /EC_number="4.1.1.31" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxylase" /protein_id="YP_001710632.1" /db_xref="GI:170782299" /db_xref="GeneID:6157649" /translation="MTTPPKKPLPLEHDSTRDGTRDAVEPALRSDVSHLGGLLGQVLR ESGGEDLLRDVERLRELVIDAYESARDASIDDAERLVATFTPERAEQVARAFTCYFHL ANLAEEHHRVRVLREREAAAGFVPDSIPDAVGTLTEELGREEAMRRLGEMRFHPVLTA HPTEARRRAVATGIRRIGDLLTERDGAMAGTLTGADIDRRLLEEIDGLWRTSPLRTTR PTPLDEVRTAMGVFDQTLFEVVPRVYRLLDDWLLGEEAGVRDAVAPAFFRLGNWIAAD RDGNPYVTAAVTEEAAGIASEHILLGLERVALRVGRSLTLGDADTPPSPELRELAAAQ DALAPHLTARIGTRAPAELHRRVLLVIAGRLAATRERHDDPIAYPSAAELLADLRVLQ GSLRSAGAHRIAGGELQGLIWQAETFGFHLAEMEVRQHSQVHREALREVLAVAAADAS GDAVPELAPMTVEVLYVFRALARLQERHGVAPFCRFIVSFTQSADDIRTVHELAALAL GSAEDAPVLDVIPLFETFADLNASTEILDGMIRLPQVAARLEQTGRKLEVMLGYSDSS KDVGPVSATFALFDAQARIAAWARENDIELTLFHGRGGALGRGGGPADRAVRAQPPGS VDGRFKLTEQGEVIFAHYGDKRIAARHIEQMAAATLLASAPSNEERNAAAAQGSAEMV RTMDEASRARFFELVKAPGFAPWFTQVTPMEEIGLLALGSRPARRGLSVESLEDLRAI PWVFAWTQARINLTGWFGLGSALAAVGDEAVLRKAYDEWPLFTSMIDNVEMSLAKTDG RLAERYLALGDRPDLAALVTEEMELTREWVRKATGRGDILEGRPVLRRAVRLRSPYVD ALSLLQLRALRALRTTASAATGQAAPGQADPTDPDHRLLLLTVNGIAAGLQNTG" misc_feature complement(2050688..2053372) /gene="ppc" /locus_tag="CMS_1939" /old_locus_tag="CMS1939" /inference="protein motif:HMMPfam:PF00311" /note="HMMPfam hit to PF00311, Phosphoenolpyruvate carboxylase, score 1.1e-57" misc_feature complement(2052914..2052949) /gene="ppc" /locus_tag="CMS_1939" /old_locus_tag="CMS1939" /note="PS00781 Phosphoenolpyruvate carboxylase active site 1." gene complement(2053522..2054748) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /db_xref="GeneID:6158873" CDS complement(2053522..2054748) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710633.1" /db_xref="GI:170782300" /db_xref="GeneID:6158873" /translation="MPDARGPVRAPRAPRAKLPRDVLVLGIIAFFVMVGFGVVVPVLP VYAESFGVGSFEVGAVISAFALMRFVMSPFVARLIDWSGERTVLAVGIGIVAVSSGLA GLAQDYVQLLLLRGAGGIGSAMFSVAAMTLLLGSTEPTRRARAIGFYQGGFLIGGMAG PALGAVLAQISLTAPFFFYAATLAVASVIGLLLLRPRTREVQATGADEVVIPFGRVLR DPRYRAALLANLGNGWASMGVRSALIPLLVVAVIGADPSATGIAFACAAVVQALALAP AARFVDTRGRRPAIVGAYGVAGLLMIAIPFAPDMVVLTVLLCVYGAAASFMGTAPAAA VGDAAGARSGRPVAVFSMVSDLGAIVGPLVAGFLADAFSYPVAFATGAVLLLAASAYA LLRMPRDERVAAPAAS" sig_peptide complement(2053522..2053662) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /note="Signal peptide predicted for CMS1940 by SignalP 2.0 HMM (Signal peptide probability 0.977) with cleavage site probability 0.874 between residues 47 and 48" misc_feature complement(2053540..2054685) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 0.00019" misc_feature complement(order(2053567..2053635,2053645..2053713, 2053750..2053818,2053828..2053887,2053906..2053974, 2053987..2054055,2054167..2054235,2054245..2054313, 2054347..2054415,2054425..2054493,2054512..2054580, 2054617..2054685)) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /note="12 probable transmembrane helices predicted for CMS1940 by TMHMM2.0 at aa 22-44, 57-79, 86-108, 112-134,146-168, 172-194, 232-254, 259-281, 288-307, 311-333,346-368 and 372-394" misc_feature complement(2053639..2054676) /locus_tag="CMS_1940" /old_locus_tag="CMS1940" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 2054786..2055964 /note="submitted with no further information" gene complement(2054954..2055421) /locus_tag="CMS_1941" /old_locus_tag="CMS1941" /db_xref="GeneID:6157650" CDS complement(2054954..2055421) /locus_tag="CMS_1941" /old_locus_tag="CMS1941" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710634.1" /db_xref="GI:170782301" /db_xref="GeneID:6157650" /translation="MGGQADQHPFNKLSVFSNADKHEMLLPSAMAYEWYLEDEGGEIE YLTPVLQTTLERAGQLRVTATVSGVQNAEIDGALRFYVDDPNRFWEATLKNVTGDPRF TYSKAPQVSVGFKHAGLQITHPVLLSIHKMARELATEVGESWGYVITHAESEE" gene 2055520..2055858 /locus_tag="CMS_1942" /old_locus_tag="CMS1942" /db_xref="GeneID:6157651" CDS 2055520..2055858 /locus_tag="CMS_1942" /old_locus_tag="CMS1942" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710635.1" /db_xref="GI:170782302" /db_xref="GeneID:6157651" /translation="MQWELMTTCDDFAFAFQHHYKQIIEGRPNIAQRVTEHKAHLPGR NIATNSGAKYLGFGIVDIEHFEGCLFAKSNFLSPKLVYGLRGMANSQKYWGERVPRRR RLQSLAAVAP" gene complement(2055938..2056747) /locus_tag="CMS_1943" /old_locus_tag="CMS1943" /db_xref="GeneID:6157652" CDS complement(2055938..2056747) /locus_tag="CMS_1943" /old_locus_tag="CMS1943" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710636.1" /db_xref="GI:170782303" /db_xref="GeneID:6157652" /translation="MGTITITGGSGRIATSIRHLLLAAGHELRLLDVVAPPTPLAPGE TSAIVDTTDVDACTEAFRGSDLVVHLAAHAAERPWEAIQRVNNDGAHAVHEAVVRAGV PRILAASSIHAVGFLPATEAARDDVPAPRPDTFYGLSKVLLEGLGSMYADRHGHVVVS VRIMTAEPEPSQARSVSTWLSPGDAARLVEAVLRWDEPGHRIVWGVSRNTRRWVSLAA GEAIGYLPEDDAEVFAHRFPELGEDTSPPAGVLLGSIFTEVELGSDMGRGR" gene 2057108..2057776 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /db_xref="GeneID:6157653" CDS 2057108..2057776 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001710637.1" /db_xref="GI:170782304" /db_xref="GeneID:6157653" /translation="MSTPRWAGRHGGASMERSDAVTVVVAADDPARARLLRDALALAD DIAVVGYALGPDGLDDLLRLAAPEVVLMDRALFSALRASGVDGVAPSDPSPRPACVVV CDSFTREDGIDLVRDGAHGALDARAPVAALAGAVHVAAAGGSAVATSGISTVACETIG ITPREGDVLQGVLLGWSNAEIAEEIALSSETVKSHVASLMRKLACRNRVALAVRAYQM GARP" misc_feature 2057168..2057539 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 0.0018" misc_feature 2057579..2057752 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 1.5e-14" misc_feature 2057630..2057713 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature 2057633..2057698 /locus_tag="CMS_1944" /old_locus_tag="CMS1944" /note="Predicted helix-turn-helix motif with score 1092.000, SD 2.91 at aa 176-197, sequence WSNAEIAEEIALSSETVKSHVA" gene 2057890..2058396 /locus_tag="CMS_1945" /old_locus_tag="CMS1945" /db_xref="GeneID:6157654" CDS 2057890..2058396 /locus_tag="CMS_1945" /old_locus_tag="CMS1945" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710638.1" /db_xref="GI:170782305" /db_xref="GeneID:6157654" /translation="MEADDMNTNRRTRTTRLTAAAVAGALVFTGLGASAATAAPTSGT STGSTVTPGTPVLLTQAQWADVAARASAQGDTAAAAAAQRMAVPDKGQVSTQAWGMIA KNAIKAALRYGKPYLPAKIRPYADKLYDLIDEVEGMAEVGIFTALTSAGLPPDVARYA AQWIVTFL" sig_peptide 2057890..2058003 /locus_tag="CMS_1945" /old_locus_tag="CMS1945" /note="Signal peptide predicted for CMS1945 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.880 between residues 38 and 39" misc_feature 2057938..2058006 /locus_tag="CMS_1945" /old_locus_tag="CMS1945" /note="1 probable transmembrane helix predicted for CMS1945 by TMHMM2.0 at aa 17-39" gene 2058532..2058909 /locus_tag="CMS_1946" /old_locus_tag="CMS1946" /db_xref="GeneID:6157655" CDS 2058532..2058909 /locus_tag="CMS_1946" /old_locus_tag="CMS1946" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710639.1" /db_xref="GI:170782306" /db_xref="GeneID:6157655" /translation="MVAGLFAGALLPQAGGLRDEVGTAHLLHLLWIYPLLFLAGTVVD AVGKHVRGSRPAGVIGSGVELVVLWAILSLMLGVYFARAEGAVLAAGIAMLVYWPFVK GMERKTARRDAEQDSPPDGVATG" misc_feature order(2058601..2058669,2058703..2058771,2058781..2058834) /locus_tag="CMS_1946" /old_locus_tag="CMS1946" /note="3 probable transmembrane helices predicted for CMS1946 by TMHMM2.0 at aa 24-46, 58-80 and 84-101" gene complement(2058952..2059914) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /db_xref="GeneID:6157656" CDS complement(2058952..2059914) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710640.1" /db_xref="GI:170782307" /db_xref="GeneID:6157656" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSWQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2058964..2059506) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-38" misc_feature complement(2059591..2059656) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2059656..2059777) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /note="Predicted helix-turn-helix motif with score 1628.000, SD 4.73 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2059777..2059842) /locus_tag="CMS_1947" /old_locus_tag="CMS1947" /note="Predicted helix-turn-helix motif with score 1628.000, SD 4.73 at aa 25-46, sequence RPVAHVARELGVSWQCAHRWVN" gene complement(2060012..2061820) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /db_xref="GeneID:6157657" CDS complement(2060012..2061820) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /codon_start=1 /transl_table=11 /product="putative DNA helicase" /protein_id="YP_001710641.1" /db_xref="GI:170782308" /db_xref="GeneID:6157657" /translation="MSTLPTPPPHVGSAAAEHLSPAFPERAAWGTVSKLRAWQEEALT AYFEKEPRDFLANATPGAGKTTFALRLASELLHRKTVDRIAVVAPTEHLKKQWADAAA RAGVRLDPMYSNSSGALGRHYHGAAVTYAQVAANPYLHKTMTESSRTLVILDEVHHGG DALSWGDAIREAFERATRRLSLTGTPFRSDTAPIPFVSYLRDHRGVRLSQTDYDYGYS RALADGVVRPVIFLAYAGSMRWRNKMGDEMEAQLAEGNTKDITSQAWRTALAPDGEWI PQVLAAADRRLSEVRQSIPDAGGLVIATDHTTARAYAAILQRISGQPVTLVLSDDVEA SANIDRFSASTSRWMVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQAVGRFVRARRR GETASIFLPSVPNLLVLANELERQRDHALDRDSSKEGDLYNPEDAMMGEANRSEKGSD SLLSEFSFEAMGSEATFDKVLFDGAEFGQMADVGSLEEEEFIGLPGILEPEQVRELLA QRQHRQSRHASERERKQAESGAPKDPDDIPLYRTLKEQRQLLNSLVGMRAKLHGEPHG LVHAELRRVCGGPAVGQCSVTQLQQRIDQLRKWMRS" misc_feature complement(2060651..2060875) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 0.014" misc_feature complement(2061239..2061718) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 4.4e-07" misc_feature complement(2061257..2061724) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /inference="protein motif:HMMPfam:PF04851" /note="HMMPfam hit to PF04851, Type III restriction enzyme, res subunit, score 6.7e-11" misc_feature complement(2061626..2061649) /locus_tag="CMS_1948" /old_locus_tag="CMS1948" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2062020..2063201) /locus_tag="CMS_1949" /old_locus_tag="CMS1949" /db_xref="GeneID:6157658" CDS complement(2062020..2063201) /locus_tag="CMS_1949" /old_locus_tag="CMS1949" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /protein_id="YP_001710642.1" /db_xref="GI:170782309" /db_xref="GeneID:6157658" /translation="MTPDAPADPLAHLDDALLDRIRARAAGYDARNAFFAEDLDELRD AGHLRLLVPRALGGSGASLADAVRAQHLLAQAAPATALGVGMHLVWTAAARILADRGD DSLRGVLEDAGRGELLAFAISEPGNDQALADALTRAEPDADGGYRFTGTKVSSSMAPA WTRLGLFGRDGTDPERPLLVHAFVPRDAAGLEIVPDWDTLGMRATQSHTVILRDVRAR PADVVRRREHGRRDDPFVLAVLQAFELLIAAVYAGIGQRALDLAVESALRRTSRAAGG ATLAADPGIRHLVAEAALAQDALLPQLTALAADVDRGVDHGDRWASLLVGAKVRATRT AAEVVQRAVAVAGGGSFQTGDELGRLYRDVLAGGFHPSSDRQTAETIATTLLGPVPRT S" misc_feature complement(2062044..2062508) /locus_tag="CMS_1949" /old_locus_tag="CMS1949" /inference="protein motif:HMMPfam:PF00441" /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase,C-terminal, score 1.2e-06" gene complement(2063254..2064105) /locus_tag="CMS_1950" /old_locus_tag="CMS1950" /db_xref="GeneID:6157659" CDS complement(2063254..2064105) /locus_tag="CMS_1950" /old_locus_tag="CMS1950" /codon_start=1 /transl_table=11 /product="putative dioxygenase" /protein_id="YP_001710643.1" /db_xref="GI:170782310" /db_xref="GeneID:6157659" /translation="MPDLLSAATTMGPVTLLVGDLDRMTAYYRDAVGLEQLDEGAEST TLGRGGVPAVVLEPARGHDLPSPGNAGLFHTAVLFDEPAALARSVASVARRAPGTYTG SADHLVSRAFYFTDPEGNGVELYTDRPRDEWTWQDGHVVMDSLRLDPNAFLRDELAPV DDAASDAAGIGHVHLQVGDTETASAFYVDTLGFELVAGWHGSAIFVSAGGYHHHMAMN TWNSRGAGRRPATLGLGTVRIEVPTRDEVEAVDARLRSAGVATRDDGRALAFEDPWGN ALVLSAS" misc_feature complement(2063266..2063601) /locus_tag="CMS_1950" /old_locus_tag="CMS1950" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 4.9e-14" misc_feature complement(2063527..2063592) /locus_tag="CMS_1950" /old_locus_tag="CMS1950" /note="PS00934 Glyoxalase I signature 1." misc_feature complement(2063734..2064078) /locus_tag="CMS_1950" /old_locus_tag="CMS1950" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 3.8e-06" gene 2064230..2065021 /locus_tag="CMS_1951" /old_locus_tag="CMS1951" /db_xref="GeneID:6157660" CDS 2064230..2065021 /locus_tag="CMS_1951" /old_locus_tag="CMS1951" /codon_start=1 /transl_table=11 /product="putative lipolytic enzyme" /protein_id="YP_001710644.1" /db_xref="GI:170782311" /db_xref="GeneID:6157660" /translation="MTEPHPWRRYVALGDSFTEGIGDPEPGSPGGHRGWADRVAEVLA EQVEGFAYANLAIRGRLLGQIADEQVEPALALHPDLVSLSAGGNDILRPGADPDRLAE RLDGMVARLSSEGATVVLFTGTDVRFSPVFGRLRGKVAIYNEDIRAVAARHDCIVADQ WALTEIQDPRMWDVDRLHLAPLGHHTVARMVLQALAVENDLEPLKPEPLPQRIWSQAR AGDIDWARSYFVPWVLRRLRHQSSGDGRTAKRPDASPWTRVDAGS" misc_feature 2064257..2064802 /locus_tag="CMS_1951" /old_locus_tag="CMS1951" /inference="protein motif:HMMPfam:PF00657" /note="HMMPfam hit to PF00657, Lipolytic enzyme, G-D-S-L,score 4.1e-27" gene complement(2065038..2066252) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /db_xref="GeneID:6157661" CDS complement(2065038..2066252) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /codon_start=1 /transl_table=11 /product="putative carboxypeptidase" /protein_id="YP_001710645.1" /db_xref="GI:170782312" /db_xref="GeneID:6157661" /translation="MSRVRRVTLAGVAAALIVSAGVYVPVTLTADPPAAVAQVDAPSP VVNVPTPESWPADGVSAVGAIGFDGVLATNEAAPVSRPMASITKTVTALVVLEAKPLA PGEDGPQVTFTAEDEALRGEILKQDGIVEPAVPGTSLSQRDLLEGALLASANNYAAAL GVWAYGSNDAFVAAANAWLADQGLTGTHVADAMGLSPETVSTTADLVRIGEMVLADPV LSGIVDQRSADVAGVGTVENRNMLADVPGFRGIKTGTLEQAGKCLLWAVDTKVGDRDV TLVGVTLGARDHAELARQVTALLPTVTANLHVVQVATAGEPFADYTTAWGATAQAVAG EDESLLVWGDTPVTTTVEASGSGEAPAGTAVGTATVTAGQQTVRVPLALDRAIPGPDG WWRLGNPGELLG" sig_peptide complement(2065038..2065220) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /note="Signal peptide predicted for CMS1952 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.237 between residues 61 and 62" misc_feature complement(2065392..2066105) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /inference="protein motif:HMMPfam:PF00768" /note="HMMPfam hit to PF00768, Peptidase S11,D-alanyl-D-alanine carboxypeptidase 1, score 2e-10" misc_feature complement(2065638..2065703) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /note="Predicted helix-turn-helix motif with score 1289.000, SD 3.58 at aa 184-205, sequence LTGTHVADAMGLSPETVSTTAD" misc_feature complement(2066166..2066234) /locus_tag="CMS_1952" /old_locus_tag="CMS1952" /note="1 probable transmembrane helix predicted for CMS1952 by TMHMM2.0 at aa 7-29" gene complement(2066249..2067103) /locus_tag="CMS_1953" /old_locus_tag="CMS1953" /db_xref="GeneID:6157662" CDS complement(2066249..2067103) /locus_tag="CMS_1953" /old_locus_tag="CMS1953" /codon_start=1 /transl_table=11 /product="putative tRNA/rRNA methyltransferase" /protein_id="YP_001710646.1" /db_xref="GI:170782313" /db_xref="GeneID:6157662" /translation="MRLRTRDGADGGRTGVHIHRIEDLSSPGLEDYSRLTDVALRRVS EPAGGLYIAESTKVMGRALAAGHVPRSVLVQEQWLDDVAPLLEGFPDVPVFVGAAAVL ERLTGYNLHRGALAAMHRPPLPAVADVLRDARRVVVLEDIVDHTNVGAIFRAVAGIGA DAVLITPRCADPLYRRSVRVSMGTVLQVPWTRLPEWSEAAPLLHEAGFHLAALALEDD AVTLDAFAADAPERIALVLGTEGDGLSRHALRHADSTVVIPMLHGVDSLNVAAASAVA LYALRVPA" misc_feature complement(2066270..2066704) /locus_tag="CMS_1953" /old_locus_tag="CMS1953" /inference="protein motif:HMMPfam:PF00588" /note="HMMPfam hit to PF00588, tRNA/rRNA methyltransferase (SpoU), score 5.1e-34" gene 2067215..2068069 /locus_tag="CMS_1954" /old_locus_tag="CMS1954" /db_xref="GeneID:6157663" CDS 2067215..2068069 /locus_tag="CMS_1954" /old_locus_tag="CMS1954" /codon_start=1 /transl_table=11 /product="putative NAD-dependent deacetylase" /protein_id="YP_001710647.1" /db_xref="GI:170782314" /db_xref="GeneID:6157663" /translation="MSTALRDDPRPPAGSTIVEAVELMRGRRTAVLTGAGLSTDSGIP DYRGEGAPKRNPMTFQQFRSEGDDFRRRYWAGGHLGWKAFSSARPNDGHAALADLEAA GVVGGLVTQNVDGLHERAGSRRVVDLHGSLDRVLCLDCGQAYARSAIADRISAENPWL DQPDAVELNPDGDAQVHDVDRFRIPVCSVCGGMLKPDVVFFGELVPTERFREASAIVS DADVLLIAGSSLAVNSGIRLLEIARRSRMPIVILNRGTTKGDTRATVRLEGGTSEILR TIATELAS" misc_feature 2067314..2067916 /locus_tag="CMS_1954" /old_locus_tag="CMS1954" /inference="protein motif:HMMPfam:PF02146" /note="HMMPfam hit to PF02146, Silent information regulator protein Sir2, score 1.4e-46" gene 2068066..2068692 /locus_tag="CMS_1955" /old_locus_tag="CMS1955" /db_xref="GeneID:6157664" CDS 2068066..2068692 /locus_tag="CMS_1955" /old_locus_tag="CMS1955" /codon_start=1 /transl_table=11 /product="putative phosphoglycerate mutase" /protein_id="YP_001710648.1" /db_xref="GI:170782315" /db_xref="GeneID:6157664" /translation="MTRIVLVRHGRTAWNVERRVQGSSDIPLDDTGRAQAATAGALLA EGGAGWDAVHASPLSRAFETASIIAEHLALGGAPTTGPLPEPALAERRYGLAEGLTHT EIEARFPDGDVPGRETVESVTERAGAALLRLAERHPGGSIIAVSHGGVIAALARSLDA SLVGRPGPMIENGSTHTFGVVDGELSLLRFGGIADLGSIADLDPARRA" misc_feature 2068069..2068632 /locus_tag="CMS_1955" /old_locus_tag="CMS1955" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 9.6e-14" gene complement(2068756..2069850) /locus_tag="CMS_1956" /old_locus_tag="CMS1956" /db_xref="GeneID:6157665" CDS complement(2068756..2069850) /locus_tag="CMS_1956" /old_locus_tag="CMS1956" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710649.1" /db_xref="GI:170782316" /db_xref="GeneID:6157665" /translation="MRLVFDCRYTRIGRHDGISRYGAELVARLGSRFDVTMLISDHRQ LALLPDLPWQLVSSPTGPREPWVARRVSRMRPDVVYSPMQTMGSRGRTYPLVLTLHDL IYYRHRRPPRDLPAPVRAIWRAFHLAWWPQRLLLDRADAIVTVSETTRGLIRAHRLTT RPVVVVPNAAELAAAPDGRPDGPRDAPAERTLVYMGSYMPYKNVETLVRAADDLPDHE LHLMSRIGPAERERLEAIADGARLVFRDGASDAEYASTLRRAMALLTASRDEGFGIPV IEAMSVGLPVVVSDIPIFREIGGDAAVYVDPDDAEGFAAAVRALEDPQEWRRRSAACI ARAVEYDWDRSAEALGDLLEQVARTGRRGA" misc_feature complement(2068831..2069325) /locus_tag="CMS_1956" /old_locus_tag="CMS1956" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 3.9e-14" gene complement(2069847..2070743) /locus_tag="CMS_1957" /old_locus_tag="CMS1957" /db_xref="GeneID:6157666" CDS complement(2069847..2070743) /locus_tag="CMS_1957" /old_locus_tag="CMS1957" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710650.1" /db_xref="GI:170782317" /db_xref="GeneID:6157666" /translation="MTVPSPYAAQLDRIPVVRRTLDLLGSRTAWWEYGPADAAQTLVV VHGFRGDHHGLEPVVAQLPGVRILSPDLPGFGDSTPLVDARHDIPGYSAWLRAFVDAT GTGDATVLGHSFGSIVVAASLADGLPSPRAILVNPIAAPALEGPRGILTRLAVLYYRA AAVLPERAGFGLLRNRAIVRVMSEAMAKTHDRSLRRWINDQHDRFFSAFSDRRVVLEA FRASVSSDASTYAPRVAVPVLLVAAERDDITPVAAQHRLQRLFADARLEVIPRVGHLI HYETPREAAAAIRRFLDEGSAS" misc_feature complement(2069874..2070551) /locus_tag="CMS_1957" /old_locus_tag="CMS1957" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1e-13" gene 2070876..2072609 /gene="treS" /locus_tag="CMS_1958" /old_locus_tag="CMS1958" /db_xref="GeneID:6157667" CDS 2070876..2072609 /gene="treS" /locus_tag="CMS_1958" /old_locus_tag="CMS1958" /EC_number="5.4.99.16" /codon_start=1 /transl_table=11 /product="trehalose synthase" /protein_id="YP_001710651.1" /db_xref="GI:170782318" /db_xref="GeneID:6157667" /translation="MRRTVSFTAPITLPGLTLDKQWYKRSVFYEVMIRSFVDSNGDGT GDIQGLISKLDYLQWLGIDGLWLPPFFQSPLRDGGYDISDYMAVLPEFGTLDDFKELV TKSHERNMRIVIDLVMNHTSDQHEWFQQSRSDPEGPYGDFYVWSDTDEKYEDIRVIFV DTEESNWTFDPVRRQFFFHRFFSHQPDLNFDNPKVHEAIYGVIRHWLDMGVDGLRLDA IPYLYETEEGNGEGEPATHEFLKRLRAMVDEEYPGRILIAEANQWPREVSAFLGTEEE PECHMAFDFPIMPRIFYSLRSQTADELKRIMGETFDIPEGAAWGVFLRNHDELTLEMV SEEYRQAMYGWYAYDPRMRVNIGIRRRLAPLLDNSRAELELVHALLFSLPGSPFLYYG DEIGMGDNIWLPDRDASRTPMQWTPDRNAGFSTADPGKLYLPVVQSLVYNYAQINVES QLAQSRSLLRWVRNVIHVRKAHPVFGQGTITVLPTDHESVLAFVRSYEGSGTHFGDRA EDVLCVFSFAHNPVSVTIDASDFAGSQLYDLFGGGVFPTVGNDGRLTLTLATQSFYWL HMGAPTIGGRP" misc_feature 2070963..2072165 /gene="treS" /locus_tag="CMS_1958" /old_locus_tag="CMS1958" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 2.5e-71" gene 2072620..2073321 /locus_tag="CMS_1959" /old_locus_tag="CMS1959" /db_xref="GeneID:6159022" CDS 2072620..2073321 /locus_tag="CMS_1959" /old_locus_tag="CMS1959" /note="3'-5' exonuclease of DNA polymerase III" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="YP_001710652.1" /db_xref="GI:170782319" /db_xref="GeneID:6159022" /translation="MSSRWHDTLASFDLETTGVDVETARIVTACIVVLDAQGEVVERH DWLADPGVEIPAGAAAIHGVTTERARAEGRDAGAVVLEIVTTIREMFARGLALVVYNA PYDLTLLNREAVRHGVEPLRDTGPVIDPLVIDKAVDTYRRGKRTLSVAAEHYGVRLDD AHDAGADAIAAGRVAQAIAGRYADQLDIPVLDLHDRQVDWSRVQAESFQDYMRRTRDP AFTTSGAWPERHVGA" misc_feature 2072644..2073144 /locus_tag="CMS_1959" /old_locus_tag="CMS1959" /inference="protein motif:HMMPfam:PF00929" /note="HMMPfam hit to PF00929, Exonuclease, score 2e-13" gene complement(2073429..2073686) /gene="rpmE2" /locus_tag="CMS_1960" /old_locus_tag="CMS1960" /db_xref="GeneID:6157668" CDS complement(2073429..2073686) /gene="rpmE2" /locus_tag="CMS_1960" /old_locus_tag="CMS1960" /note="RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31 type B" /protein_id="YP_001710653.1" /db_xref="GI:170782320" /db_xref="GeneID:6157668" /translation="MKTDIHPKYAPVVFRDLASGATFLTRSTVSSSKTIVWEDGNEYA VIDVEISSESHPFYTGKQRIMDSAGRVEKFNSRYAGFGTKK" misc_feature complement(2073441..2073686) /gene="rpmE2" /locus_tag="CMS_1960" /old_locus_tag="CMS1960" /inference="protein motif:HMMPfam:PF01197" /note="HMMPfam hit to PF01197, Ribosomal protein L31,score 2.6e-19" misc_feature complement(2073468..2073524) /gene="rpmE2" /locus_tag="CMS_1960" /old_locus_tag="CMS1960" /note="PS01143 Ribosomal protein L31 signature." gene complement(2073816..2074637) /locus_tag="CMS_1961" /old_locus_tag="CMS1961" /db_xref="GeneID:6158957" CDS complement(2073816..2074637) /locus_tag="CMS_1961" /old_locus_tag="CMS1961" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710654.1" /db_xref="GI:170782321" /db_xref="GeneID:6158957" /translation="MPGVRAGRLVRMSHVLSLSGVSFVRNGTTILDQVDWTVDGDERW VVLGPNGAGKTSLLQIASAMQHPSSGTATVLDHELGRVDVFELRSRIGFASTAMARRI PADETVLDVVLTAAYSVTGRWNEDYEDIDVRRAQRVLAEWRLGHLEQRRFGTLSDGEQ KRVQIARSIMTDPELLLLDEPAASLDLGAREELLQLLGGYASAPEAPGIVMVTHHVEE IPRGFTHGLLLRDGAVVASGPLGDVVTAENLGRTFGLDLEVMQVDGRFTARASRR" misc_feature complement(2073942..2074517) /locus_tag="CMS_1961" /old_locus_tag="CMS1961" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.8e-38" misc_feature complement(2074473..2074496) /locus_tag="CMS_1961" /old_locus_tag="CMS1961" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2074692..2075876) /locus_tag="CMS_1962" /old_locus_tag="CMS1962" /db_xref="GeneID:6157669" CDS complement(2074692..2075876) /locus_tag="CMS_1962" /old_locus_tag="CMS1962" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710655.1" /db_xref="GI:170782322" /db_xref="GeneID:6157669" /translation="MRADVITKEYPPEVYGGAGVHVTELVKAMRQRTEVVVRAFGAPR EEPGVFSYPVPAELAGANATLQTMAVDLAIASDVAGADVVHSHTWYANHAGHVASMLH GIPHVVTAHSLEPLRPWKAEQLGGGYRVSSWIERTAYEAADAVIAVSDGMKRDILRSY PALDEARVHTVYNGIDLESWKPVHDDELVRSLGIDPSRPSVVFVGRITRQKGLPYLLR AAALLPADVQMVLCAGAPDTPQIMEEVTALVRGLQEGRSGVVWIDRLLPRRELSAVLT AATVFVCPSVYEPLGIVNLEAMACGAPVVGTATGGIPEVVDDGVTGRLVPIDQATDGT GTPTDPERFVRDLAATLTEVVQDPGTAMRMGEAGLVRAEREFGWDRIARQTEAIYASI LR" misc_feature complement(2074764..2075324) /locus_tag="CMS_1962" /old_locus_tag="CMS1962" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 9.8e-26" gene 2075923..2077164 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /db_xref="GeneID:6157670" CDS 2075923..2077164 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /EC_number="2.7.7.27" /note="catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="YP_001710656.1" /db_xref="GI:170782323" /db_xref="GeneID:6157670" /translation="MASKKIFGIVLAGGEGKRLMPLTADRAKPAVPFGGQYRLIDFAL SNLINSGLTQIVVLTQYKSHSLDRHVSQTWRLNQMLNSYIASVPAQQRLGKRWFSGSA DAILQSLNLINDEKPDIVVVVGADHVYRMDFSQMIDAHIASGHGATVAAIRQPIELAD QFGVIDVDPANPYQIRAFLEKPKDPQGLDDSPGEVLASMGNYVFDTDQLIDAVRRDGE NAESAHDMGGDIVPWFVEQGNAGVYDLNRNEVPGANDRDRYYWRDVGTIESFFDAHQD LISALPVFNLYNKDWPIFSQQLNSPPAKFVRDAQGNTGTMIDSITSLGGVISGAHVER SVLGPWVIAESGARIVDSIVFDKVHIGAGAVISRAILDKDVEVEPGATVGVDHDRDRA RGYTVTDGGITVVGKGVRVTP" misc_feature 2075941..2076762 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /inference="protein motif:HMMPfam:PF00483" /note="HMMPfam hit to PF00483, Nucleotidyl transferase,score 2.1e-82" misc_feature 2075956..2076015 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /note="PS00808 ADP-glucose pyrophosphorylase signature 1." misc_feature 2076211..2076237 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /note="PS00809 ADP-glucose pyrophosphorylase signature 2." misc_feature 2076511..2076543 /gene="glgC" /locus_tag="CMS_1963" /old_locus_tag="CMS1963" /note="PS00810 ADP-glucose pyrophosphorylase signature 3." gene 2077161..2077859 /gene="serB" /locus_tag="CMS_1964" /old_locus_tag="CMS1964" /db_xref="GeneID:6158718" CDS 2077161..2077859 /gene="serB" /locus_tag="CMS_1964" /old_locus_tag="CMS1964" /EC_number="3.1.3.3" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase" /protein_id="YP_001710657.1" /db_xref="GI:170782324" /db_xref="GeneID:6158718" /translation="MSAPSTLTTTTTPAPLVARALPRMLVVLDVDSTLIEDEAIELLA AEAGSLEEVAAVTERAMRGELDFAESLRSRVATLAGLPVSVHAQVGARIRVTPGAARM IQGLHEAGHVVAVVSGGFHELLDPLAERLGLDLWRANRLETTEGRLTGRVSGPVIDAD AKRAAVEEWSRDLGIPLARVVAVGDGANDLEMMHVAGLAVAFDAKPAVRRRADVCIDR RDLAQVLALLGLPR" misc_feature 2077227..2077778 /gene="serB" /locus_tag="CMS_1964" /old_locus_tag="CMS1964" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 5.1e-24" misc_feature 2077473..2077565 /gene="serB" /locus_tag="CMS_1964" /old_locus_tag="CMS1964" /note="PS00044 Bacterial regulatory proteins, lysR family signature." gene complement(2077904..2078860) /locus_tag="CMS_1965" /old_locus_tag="CMS1965" /db_xref="GeneID:6158987" CDS complement(2077904..2078860) /locus_tag="CMS_1965" /old_locus_tag="CMS1965" /codon_start=1 /transl_table=11 /product="putative phosphotransferase" /protein_id="YP_001710658.1" /db_xref="GI:170782325" /db_xref="GeneID:6158987" /translation="MTELLAAWDLGPAALTELGATHNHAYRVDVDGGSRYLLRLHVAR RKQHEIDLELDWLDVLASRGWPSVPGPQRTRDGSWTATVEVAVPDDDEVGLRRAVVGA SGGRVERRLASLLTWHDGEMLSSLPASADAGPFAETLAALHAAGADPAAVALAGQRRR YDADYATTRLERLVEGYPGIMADGSTADALGGAIEQLRATLAEAGPPIMVHGDYHPGN LIQGPDGVSVIDFDRCGLGPAGLDVAAAIMYLAPRQRAQFHRAYTAAGGSTGVPDERF GAFIFLAYLDNVTHLASLPSERGRMPANIAQLTAIARAVVAG" misc_feature complement(2078021..2078821) /locus_tag="CMS_1965" /old_locus_tag="CMS1965" /inference="protein motif:HMMPfam:PF01636" /note="HMMPfam hit to PF01636, Aminoglycoside phosphotransferase, score 5.1e-22" gene complement(2078884..2079594) /gene="fabG" /locus_tag="CMS_1966" /old_locus_tag="CMS1966" /db_xref="GeneID:6157671" CDS complement(2078884..2079594) /gene="fabG" /locus_tag="CMS_1966" /old_locus_tag="CMS1966" /EC_number="1.1.1.100" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] reductase" /protein_id="YP_001710659.1" /db_xref="GI:170782326" /db_xref="GeneID:6157671" /translation="MSTARTVVVTGGNRGIGYAIAEEMLRRGHRVAVTARSGQGPEGS LTVRADVTDAASVDAAFTEVEAAYGPVEVVVANAGITRDTLMMRMSDDDFTEVVDTNL GGAFRVVKRASKGMLKARFGRIVLISSVVGLYGSGGQVNYAASKSGLVGLARSVTREL GGRGITANVIAPGFIETDMTAELPEATAAEYKKSIPAGRYGTAAEVAGVVAWVSSDEA AYISGAVIPVDGGLGMGH" misc_feature complement(2078899..2079576) /gene="fabG" /locus_tag="CMS_1966" /old_locus_tag="CMS1966" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.7e-73" misc_feature complement(2079115..2079162) /gene="fabG" /locus_tag="CMS_1966" /old_locus_tag="CMS1966" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene 2079715..2080170 /locus_tag="CMS_1967" /old_locus_tag="CMS1967" /db_xref="GeneID:6158679" CDS 2079715..2080170 /locus_tag="CMS_1967" /old_locus_tag="CMS1967" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710660.1" /db_xref="GI:170782327" /db_xref="GeneID:6158679" /translation="MPAPQQSVTSLPRSPQEDRHARMVKYTIAMSIRMVCILSCLFLQ GWWLAVAAIGAIVLPYFAVILANVGGNQGTAVERPGGVVVVSARHSGFPPPAEPFVPS EPFRASEPFTTPEPFTTYETGRAPEPTPDPDPRPTTAGGPTAPDTPTGA" misc_feature 2079850..2079918 /locus_tag="CMS_1967" /old_locus_tag="CMS1967" /note="1 probable transmembrane helix predicted for CMS1967 by TMHMM2.0 at aa 46-68" gene 2080167..2080424 /locus_tag="CMS_1968" /old_locus_tag="CMS1968" /db_xref="GeneID:6157672" CDS 2080167..2080424 /locus_tag="CMS_1968" /old_locus_tag="CMS1968" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710661.1" /db_xref="GI:170782328" /db_xref="GeneID:6157672" /translation="MSGLASWGLGSAGPSSDVVECSRAGCRADAAWRVEWRNPRIHTA DRVKTWTACDEHVAFLRDFLAGRDFPVRVAALDAPVAGAIA" gene 2080421..2081266 /locus_tag="CMS_1969" /old_locus_tag="CMS1969" /db_xref="GeneID:6157673" CDS 2080421..2081266 /locus_tag="CMS_1969" /old_locus_tag="CMS1969" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001710662.1" /db_xref="GI:170782329" /db_xref="GeneID:6157673" /translation="MSRWRFVLNRRWAGYLAVAVVFAIACVLLSHWQFARRDEALAEI AKVEDNWDRAPQPVDQVLADTSAYVDTQKWTPVTMTGTYLVDQQLLARNRPFNGQPGF EVLTPLRLDDGRVFVVDRGWVPIGNSQDSPDSVPAPPVGEVTVTARLKAGEPELPGRS APEGQIATVNLPDIAARVGSPTFTGAYGLLISEDPAPADAAPFATPRPEEDEGPHLSY AFQWLVFAIIAFVGLGVAIRNEYRIINADDPEEQDRERARQAKRARKQPSDADVEDRI LDEAR" sig_peptide 2080421..2080546 /locus_tag="CMS_1969" /old_locus_tag="CMS1969" /note="Signal peptide predicted for CMS1969 by SignalP 2.0 HMM (Signal peptide probability 0.936) with cleavage site probability 0.400 between residues 42 and 43" misc_feature order(2080454..2080522,2081072..2081131) /locus_tag="CMS_1969" /old_locus_tag="CMS1969" /note="2 probable transmembrane helices predicted for CMS1969 by TMHMM2.0 at aa 12-34 and 218-237" gene complement(2081318..2082916) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /db_xref="GeneID:6157674" CDS complement(2081318..2082916) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP binding protein" /protein_id="YP_001710663.1" /db_xref="GI:170782330" /db_xref="GeneID:6157674" /translation="MLAVHDLELRVGARVLMEDVSFRVSPGDKIGLVGRNGAGKTTLT KILAGEGQPTGGRIDRSGEIGYLPQDPRSGNPEDLARTRILDARGLGTLSLDMQRAML DMASTDDKVSAKAMKDYGRLEERFVALGGYAAEAEAASIASNLSLPDRILDQPLSTLS GGQRRRIELARILFSGADTMLLDEPTNHLDADSVTWLREFLKGYQGGLIVISHDVELV GDTVNRVFYLDANRMVIDIYNMGWKHYLRQRAADEERRKKERANVEKKAGVLQLQAAK FGAKASKAAAAHQMVRRAEKMLSGLEEVRAVDRVAKLRFPEPVACGRTPLMASDLSKN YGSLEIFTAVDLAIDRGSKVVILGLNGAGKTTLLRILAGVDEPDTGRLEPGHGLRIGY YAQEHETIDVKRSVLENMVSSSPDISEMEARRVLGSFLFTGDDSAKPAGVLSGGEKTR LALAMIVVSGANVLLLDEPTNNLDPASREEILGALNTYSGAVVLVSHDSGAVEALNPE RVLIMPEGTEDHWSPDYMDLIELA" misc_feature complement(2081369..2081866) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.9e-42" misc_feature complement(2081546..2081590) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /note="PS00211 ABC transporters family signature." misc_feature complement(2081822..2081845) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2082224..2082838) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.8e-43" misc_feature complement(2082398..2082442) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /note="PS00211 ABC transporters family signature." misc_feature complement(2082794..2082817) /locus_tag="CMS_1970" /old_locus_tag="CMS1970" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2083138..2083473) /locus_tag="CMS_1971" /old_locus_tag="CMS1971" /db_xref="GeneID:6157675" CDS complement(2083138..2083473) /locus_tag="CMS_1971" /old_locus_tag="CMS1971" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710664.1" /db_xref="GI:170782331" /db_xref="GeneID:6157675" /translation="MSTQSTLTPQKFDEVEEALKDVMDPELGINVVDLGLIYDLAWDD ENDALIIHMTLTSAGCPLTDVLEEQTAEALDGVVAAFRINWVWMPPWGPDRITDDGRD MMRALGFSM" misc_feature complement(2083219..2083443) /locus_tag="CMS_1971" /old_locus_tag="CMS1971" /inference="protein motif:HMMPfam:PF01883" /note="HMMPfam hit to PF01883, Protein of unknown function DUF59, score 3.5e-22" gene complement(2083470..2084240) /locus_tag="CMS_1972" /old_locus_tag="CMS1972" /db_xref="GeneID:6157676" CDS complement(2083470..2084240) /locus_tag="CMS_1972" /old_locus_tag="CMS1972" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001710665.1" /db_xref="GI:170782332" /db_xref="GeneID:6157676" /translation="MSTLTITDLHVSVDTEQGRKQILKGVDLTINEGEIHAIMGPNGS GKSTLAYTIAGHPKYHVDSGSITLDGVEVLDMTVDERARAGLFLAMQYPVEIPGVTTT NFLRTAKTAIDGEAPAIRGWIKDVRTSMAALKMDPAFAERNVNEGFSGGEKKRNEVLQ LELLKPKFAVLDETDSGLDVDALKIVSEGVNRAKANTGLGLLLITHYTRILRYIQPDF VHVFVAGRVAEQGGRELADRLEDEGYDRFLTPSTTVDA" misc_feature complement(2083566..2084144) /locus_tag="CMS_1972" /old_locus_tag="CMS1972" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.4e-25" misc_feature complement(2084100..2084123) /locus_tag="CMS_1972" /old_locus_tag="CMS1972" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2084254..2084574) /locus_tag="CMS_1973" /old_locus_tag="CMS1973" /db_xref="GeneID:6157677" CDS complement(2084254..2084574) /locus_tag="CMS_1973" /old_locus_tag="CMS1973" /codon_start=1 /transl_table=11 /product="putative dioxygenase ferredoxin subunit" /protein_id="YP_001710666.1" /db_xref="GI:170782333" /db_xref="GeneID:6157677" /translation="MTAVRICAVDDLDVNEALRIEIEGLAIALVKDSSGTVHAIGDTC THGDISLAEGFVEGDTLECWAHGSKFSLETGKPRTLPAYEPVPVYPVTIVDGDIHIDT TPKS" misc_feature complement(2084287..2084571) /locus_tag="CMS_1973" /old_locus_tag="CMS1973" /inference="protein motif:HMMPfam:PF00355" /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] region,score 1.9e-22" gene complement(2084571..2085782) /locus_tag="CMS_1974" /old_locus_tag="CMS1974" /db_xref="GeneID:6157678" CDS complement(2084571..2085782) /locus_tag="CMS_1974" /old_locus_tag="CMS1974" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710667.1" /db_xref="GI:170782334" /db_xref="GeneID:6157678" /translation="MTTPLATTEAPVPADQHGNRAHTDGGWAAVPIQTRSERFTSTDV EAFEAVTGREAVWKLTPVRRLDDLISGDLDGSRYPVTHSGADGTSVSWIPRDDARIGT AGAPEDRAQANAWSSFGEVLAIAVTGEERVTVTVGRSELGLAPRAAHTLITAAPFSRG VVILDNVGSASLVENVEIVVGDQAELTVVTVQQWDDEARHLAAHQAVVGRDAKLKHVV VTLGGSIVRVNPSAHLSNEGADGELLGVYFADAGQHLEQQVYVDHDAPNTRSRVTYKG ALQGKGARTVWIGDVLIRRSAPGTDSYEQNRNLVLTDGTRADSVPNLEIETGDIAGAG HASATGRFDDEQLFYLQARGITEEEARRLVVRGFLSEIVQQIGVPDLEERLQAAIEAE LSASTSTETIR" misc_feature complement(2084679..2085377) /locus_tag="CMS_1974" /old_locus_tag="CMS1974" /inference="protein motif:HMMPfam:PF01458" /note="HMMPfam hit to PF01458, SufBD, score 7.6e-28" gene complement(2085783..2087201) /locus_tag="CMS_1975" /old_locus_tag="CMS1975" /db_xref="GeneID:6157679" CDS complement(2085783..2087201) /locus_tag="CMS_1975" /old_locus_tag="CMS1975" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710668.1" /db_xref="GI:170782335" /db_xref="GeneID:6157679" /translation="MSDVLIDRPELESLGQYEFGWSDSDVAGASAKRGISPQVVADIS RRKSEPEWMLANRMKGYELFGKKPMPTWGADLSGIDFDNIKYFVRSTEKQAQTWEDLP DDIKNTYERLGIPEAERQRLVSGVAAQYESEVVFHSIQKELEDQGVIFMDTDTALREH PDLFKEYFGTVIPAGDNKFAALNTAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQ FERTLIIADEGSYVHYIEGCTAPIYKSDSLHSAVVEIIVKKDARVRYTTIQNWSNNVY NLVTKRATAAEGATMEWIDGNIGSKVTMKYPSIYLMGERAKGETLSVAFAGPGQHQDA GAKMVHMAPYTQSSIVSKSIARGGGRAGYRGEIRVDAAAHHSANTVRCDALLVDTISR SDTYPAIDIRVDDVQLGHEATVSRVSEEQLFYLMSRGMPEDEAMAMIVRGFIEPIARE LPMEYALELNKLIEMGMEGSVG" misc_feature complement(2085873..2086571) /locus_tag="CMS_1975" /old_locus_tag="CMS1975" /inference="protein motif:HMMPfam:PF01458" /note="HMMPfam hit to PF01458, SufBD, score 9.3e-128" gene 2087508..2088476 /locus_tag="CMS_1976" /old_locus_tag="CMS1976" /db_xref="GeneID:6157680" CDS 2087508..2088476 /locus_tag="CMS_1976" /old_locus_tag="CMS1976" /codon_start=1 /transl_table=11 /product="putative cytochrome oxidase assembly protein" /protein_id="YP_001710669.1" /db_xref="GI:170782336" /db_xref="GeneID:6157680" /translation="MLDQTLMVGRRLRERLPDGITRVTRMLVWTTLVVQTLVVGTGGL VRLTGSGLGCPTWPRCTADSFVSTPEMGVHGVIEFGNRLLTFVLVIVAIATFLAVLRL RNRGRGLFSIALAIGLGIPAQGVIGGITVLTGLNPYVVGLHFVVSVVLVVLSTVLVWR TYHPLDEAERSVPSSFLSLARATAVVVGITILVGIVVTGSGPHAGDQGAARNGLDPEL LQHVHSWPAYTTFGLTIALVVIAARNRWTAVSRWTRALLAVELVQIAVGLIQARTGLP EFLVGLHMVLACLLASAMTATLLSTTRRADTLRLTPAEARRSAHVG" misc_feature 2087556..2088419 /locus_tag="CMS_1976" /old_locus_tag="CMS1976" /inference="protein motif:HMMPfam:PF02628" /note="HMMPfam hit to PF02628, Cytochrome oxidase assembly, score 1.7e-11" misc_feature order(2087586..2087654,2087742..2087810,2087829..2087897, 2087925..2087993,2088054..2088122,2088180..2088233, 2088270..2088329,2088339..2088407) /locus_tag="CMS_1976" /old_locus_tag="CMS1976" /note="8 probable transmembrane helices predicted for CMS1976 by TMHMM2.0 at aa 27-49, 79-101, 108-130, 140-162,183-205, 225-242, 255-274 and 278-300" gene complement(2088762..2089682) /locus_tag="CMS_1977" /old_locus_tag="CMS1977" /db_xref="GeneID:6157681" CDS complement(2088762..2089682) /locus_tag="CMS_1977" /old_locus_tag="CMS1977" /note="converts protoheme IX and farnesyl diphosphate to heme O" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="YP_001710670.1" /db_xref="GI:170782337" /db_xref="GeneID:6157681" /translation="MNVAVQSRVDRETIGVARKTKAYVALTKPRVIELLLVTTAPVMI LAQGGWPNPWLILGVLVGGTLSAGSANAFNCYIDRDIDRVMKRTQRRPLVTGELTDRE ALVFAWIIGVASIIWLGVISNWLAAALSLAAILFYVFVYTLWLKRRTPQNIVWGGAAG CMPVLIGWAAVTGDISWAPVILFMIVFLWTPPHYWPLSMKYRDDYASVNVPMLAVVRG RAAVGLQTILYSWATLACSLLLIPVAGMGLVYTLAALAGGGWFVYETHRLYDLAVRHE PIKPMRVFHASISYLSLLFLAVGIDPLLPF" misc_feature complement(order(2088768..2088836,2088897..2088965, 2088978..2089031,2089092..2089160,2089170..2089229, 2089248..2089307,2089320..2089373,2089452..2089520, 2089533..2089592)) /locus_tag="CMS_1977" /old_locus_tag="CMS1977" /note="9 probable transmembrane helices predicted for CMS1977 by TMHMM2.0 at aa 31-50, 55-77, 104-121, 126-145,152-171, 175-197, 218-235, 240-262 and 283-305" misc_feature complement(2088777..2089589) /locus_tag="CMS_1977" /old_locus_tag="CMS1977" /inference="protein motif:HMMPfam:PF01040" /note="HMMPfam hit to PF01040, UbiA prenyltransferase,score 1.5e-78" misc_feature complement(2089395..2089463) /locus_tag="CMS_1977" /old_locus_tag="CMS1977" /note="PS00943 UbiA prenyltransferase family signature." gene 2089866..2091947 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /db_xref="GeneID:6157682" CDS 2089866..2091947 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /EC_number="2.2.1.1" /note="catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase" /codon_start=1 /transl_table=11 /product="transketolase" /protein_id="YP_001710671.1" /db_xref="GI:170782338" /db_xref="GeneID:6157682" /translation="MQWDPIDSKAVDTARILAADAVEKVGNGHPGTAMSLAPAAYLLF QKVMRRDPSDSTWIGRDRFILSVGHSSLTQYTQFFLGGYGLEIEDLQALRTWDSKTPG HPEYGHTDGVEITTGPLGQGLASSVGFAYAARYERGLFDPETPAGESPFDHFVYVIAG DGDMQEGITSEASSLAGHQELGNLIAIYDSNQISIEDDTDIAFTEDVAARYEAYGWHV QHVDWKKTGEYVEDVQELFDAVEAAKAETRKPSLIILKTIIGWPSPKKQNSGKIHGSA LGAEELAAVKQIVGFDPEKSFEVPDGVLEHTRQAVERGQQQHREWDEKLAAWAEANPE RKTLLDRVLAGDAPEGLDEALPVFPAGKDVSTRAASGKVINAIAEVMPELWGGSADLA ESNNTTIESAPSFVPAERSTGMWKGEPYGRVLHFGIREHAMGAILNGIVLHGNTRPFG GTFLIFSDYMRPAVRLAALMKAPSIFVWTHDSVALGGDGPTHQPVEQLASLRAIPGLD VIRPADANETAQAWKTILTRRMGPAGLALSRQNLPVLERGTGDATATEYASAAGVAKG AYILADTEGTPDVILIATGSEVQFAVEAREALAADGIKARVVSAPSLEWFEEQDAAYK EHVLPEAVAARVSVEAGISLSWKQYVGHHGRSISIEHFGASAEYEVLYREFGITTEAV VTAAKESIASL" misc_feature 2089881..2090909 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /inference="protein motif:HMMPfam:PF00456" /note="HMMPfam hit to PF00456, Transketolase, N terminal,score 3.2e-175" misc_feature 2089908..2089970 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /note="PS00801 Transketolase signature 1." misc_feature 2090955..2091497 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /inference="protein motif:HMMPfam:PF02779" /note="HMMPfam hit to PF02779, Transketolase, central region, score 5e-64" misc_feature 2091321..2091371 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /note="PS00802 Transketolase signature 2." misc_feature 2091564..2091911 /gene="tkt" /locus_tag="CMS_1978" /old_locus_tag="CMS1978" /inference="protein motif:HMMPfam:PF02780" /note="HMMPfam hit to PF02780, Transketolase, C terminal,score 1.6e-11" gene 2092098..2093213 /gene="tal" /locus_tag="CMS_1979" /old_locus_tag="CMS1979" /db_xref="GeneID:6159019" CDS 2092098..2093213 /gene="tal" /locus_tag="CMS_1979" /old_locus_tag="CMS1979" /EC_number="2.2.1.2" /note="catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate" /codon_start=1 /transl_table=11 /product="transaldolase" /protein_id="YP_001710672.1" /db_xref="GI:170782339" /db_xref="GeneID:6159019" /translation="MTDTTSPTAQLSAAGVSIWLDDLSRERIDAKGIEKVIAERDVVG ITTNPTIFASALAKGEAYDAQVRELAADGADVDRAVFEITTRDVGEAARIFRPVYDRT VGFDGRVSIEVSPDFANDTQATIDEAHKLWDKISEPNVMIKIPATREGLEAITEVIGA GISVNVTLIFSLERYREVINAYLTGLEKAKAAGIDLSTIHSVASFFVSRVDTEIDKRL DAIGTEEATALKSKAGVANAQLAYQAFEQSFASERAQGLLGAGANKQRPLWASTGVKS PDLPDTLYVTQLVAADVVNTMPEKTLDATFDHGVIEGDTITGSYDAANEVLNAVDGLG ISYKEVTELLEKEGVEKFKVSWSELIETVTTALDGAK" misc_feature 2092146..2093186 /gene="tal" /locus_tag="CMS_1979" /old_locus_tag="CMS1979" /inference="protein motif:HMMPfam:PF00923" /note="HMMPfam hit to PF00923, Transaldolase, score 2.6e-92" misc_feature 2092227..2092253 /gene="tal" /locus_tag="CMS_1979" /old_locus_tag="CMS1979" /note="PS01054 Transaldolase signature 1." misc_feature 2092515..2092568 /gene="tal" /locus_tag="CMS_1979" /old_locus_tag="CMS1979" /note="PS00958 Transaldolase active site." gene 2093210..2094805 /gene="pgi" /locus_tag="CMS_1980" /old_locus_tag="CMS1980" /db_xref="GeneID:6159006" CDS 2093210..2094805 /gene="pgi" /locus_tag="CMS_1980" /old_locus_tag="CMS1980" /EC_number="5.3.1.9" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /protein_id="YP_001710673.1" /db_xref="GI:170782340" /db_xref="GeneID:6159006" /translation="MSVRIALSGAAATAVETHVPALVEAHVASGITGLDGTLWGPDAE SEATKRLGWTQAVSVSRPLVAEITALREELRGQGVDHIVLGGMGGSSLAPEVITRTAG VELTVLDSTDPGQVLAALGDRLATTAVVISSKSGSTLETDSQKRVYEKSFREAGIDPT TRIVIVTDPGSPLDESARADGYRVFNADPDVGGRYSALTAFGLVPSGLAGADIGGLLD EAEAASAQLAVDDVSNPGLVLGAAIAGTSPLKDKLGIVSDGTHIVGFGDWVEQLIAES TGKLGTGLLPVVLPTDAPELALGLADLQIARLVADVDAHDAAEGEIVISGTLGAQILT WEYAVAVAGRLLEINPFDQPDVEAAKVAARGLLDDRPAPEAPVVTTDGIEVRGTSEVT EGATDVSSAIDALLAQVGPTGYVAVQAFVDRLALPELERLLDAVARKVGRPVTFGWGP RFLHSTGQFHKGGTPVGVFLQITADAAEDLEIPDRPFTFGQLIQAQAAGDATVLAEHG RPVLRLNLTDPTTDARALLSTLE" misc_feature 2093231..2094361 /gene="pgi" /locus_tag="CMS_1980" /old_locus_tag="CMS1980" /inference="protein motif:HMMPfam:PF00342" /note="HMMPfam hit to PF00342, Phosphoglucose isomerase (PGI), score 3.4e-07" gene 2094844..2096385 /gene="zwf" /locus_tag="CMS_1981" /old_locus_tag="CMS1981" /db_xref="GeneID:6158860" CDS 2094844..2096385 /gene="zwf" /locus_tag="CMS_1981" /old_locus_tag="CMS1981" /EC_number="1.1.1.49" /note="catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="YP_001710674.1" /db_xref="GI:170782341" /db_xref="GeneID:6158860" /translation="MSPVDITPEFNPLRIPSDRRLNRIAGPSSLIIFGVTGDLSRKKL MPAVYDLANRGLLPPGFALIGFARRDWEDQDFEQVVYEAVKQYSRTKFDEDVWRQLAQ GIRFVQGTFDDDEAFQTLKDITEELDRERGTMGNHAFYLSIPPKSFPLVTEQLRRSGL ADQKEGHWRRVVIEKPFGSDLTTARELNAVVESVFPPDSVFRIDHYLGKETVQNILAL RFANQLYEPLWNANYVDHVQITMAEDIGVGGRAGYYDGIGAARDVIQNHLLQLLALTA MEEPVAFDASSLRDEKEKVLSAVRLPKDLSTATARGQYAGGWQGGEEVVGFLDEDGMD PESLTETYAAMRLDINTRRWSGVPFYLRAGKRLGRRVTEIAVVFKRAPQNLFAEDQTS ALGQNALVIRVQPDEGVTIRFGSKVPGAGMQVRDVTMDFGYGHAFTEASPEAYERLIL DVLLGDPPLFPRHQEVELSWKILDPIEEFWRTQGQPEQYRPGTWGPASADELLARDGR TWRRP" misc_feature 2094910..2095485 /gene="zwf" /locus_tag="CMS_1981" /old_locus_tag="CMS1981" /inference="protein motif:HMMPfam:PF00479" /note="HMMPfam hit to PF00479, Glucose-6-phosphate dehydrogenase, score 5.1e-66" misc_feature 2095453..2095473 /gene="zwf" /locus_tag="CMS_1981" /old_locus_tag="CMS1981" /note="PS00069 Glucose-6-phosphate dehydrogenase active site." misc_feature 2095489..2096382 /gene="zwf" /locus_tag="CMS_1981" /old_locus_tag="CMS1981" /inference="protein motif:HMMPfam:PF02781" /note="HMMPfam hit to PF02781, Glucose-6-phosphate dehydrogenase, score 8.7e-144" gene 2096382..2097380 /locus_tag="CMS_1982" /old_locus_tag="CMS1982" /db_xref="GeneID:6159107" CDS 2096382..2097380 /locus_tag="CMS_1982" /old_locus_tag="CMS1982" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710675.1" /db_xref="GI:170782342" /db_xref="GeneID:6159107" /translation="MRVDLPNTTTAKISKALVKIREEGGAVALGRVLTLVISTSLGSE EEAIEAANDASREHPMRVIVISTQRGAESETTTEKARVDAEIRVGGDAGASEVVVLRV YGAAAEDEESLVTGLLLPDAPVVAWWPHDAPAVVSQSPLGRIAQRRITDSSTSSNPRV ALQHLAATYAPGDTDFAWTRLTLWRALLAAVLDQPPYEPVTQVEVSGAADSPSTVLLA AWLGLQLQVPVLHEVTTRATGSSGIHGVRLHRASGVIDLDRPIANVATLKQPNQPTHD VSLPRRSLRDCLAEELRRLDPDALYGDVIRHGLERAAAGQGYISASTTARKDSGDR" gene 2097377..2098147 /gene="pgl" /locus_tag="CMS_1983" /old_locus_tag="CMS1983" /db_xref="GeneID:6157683" CDS 2097377..2098147 /gene="pgl" /locus_tag="CMS_1983" /old_locus_tag="CMS1983" /EC_number="3.1.1.31" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="YP_001710676.1" /db_xref="GI:170782343" /db_xref="GeneID:6157683" /translation="MTNDRRVLVHPDKKAMTGSVAARFLTKLVDILDEEETANVVLTG GTVGPSILAAVNESAARDSVDWTRVHFWFGDERWLPQGDPERNDTTVRTALLDHIDLP AENVHAMGASDAGLSLDEAVAAYTAELAAHANGDTSIPRFDITFLGVGPDGHVASLFP DSEGIRTMDAAVIPVRNSPKPPAERISLTLPVLNSSLRIWMVLAGPDKAFALGLALAG ADRTEVPVAGIKGRKRTVFFIDREAAADVPENLRLSSY" misc_feature 2097434..2098126 /gene="pgl" /locus_tag="CMS_1983" /old_locus_tag="CMS1983" /inference="protein motif:HMMPfam:PF01182" /note="HMMPfam hit to PF01182,Glucosamine/galactosamine-6-phosphate isomerase, score 0.00047" misc_feature 2097494..2097520 /gene="pgl" /locus_tag="CMS_1983" /old_locus_tag="CMS1983" /note="PS00144 Asparaginase / glutaminase active site signature 1." gene complement(2098327..2098695) /locus_tag="CMS_1984" /old_locus_tag="CMS1984" /db_xref="GeneID:6158862" CDS complement(2098327..2098695) /locus_tag="CMS_1984" /old_locus_tag="CMS1984" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710677.1" /db_xref="GI:170782344" /db_xref="GeneID:6158862" /translation="MASGGSAIRGSRVGAGPMGEQDRGFHAERISISYWDALGNETVR HFAANLPEEEIPVTIDSPQSGLPAGRDKANPPSVAKLEPYKTHLAYVKEHRSEEEASQ LLEEALEQLRARRGTVKATK" gene complement(2098707..2098958) /gene="secG" /locus_tag="CMS_1985" /old_locus_tag="CMS1985" /db_xref="GeneID:6157684" CDS complement(2098707..2098958) /gene="secG" /locus_tag="CMS_1985" /old_locus_tag="CMS1985" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecG" /protein_id="YP_001710678.1" /db_xref="GI:170782345" /db_xref="GeneID:6157684" /translation="MEILQVVLQVVLGITSLLLTMLILLHKGRGGGLSDMFGGGTTSS LGSSGVAERNLNRITVILGLIWVTCIVVLGLITKFDTGL" misc_feature complement(2098725..2098946) /gene="secG" /locus_tag="CMS_1985" /old_locus_tag="CMS1985" /inference="protein motif:HMMPfam:PF03840" /note="HMMPfam hit to PF03840, Preprotein translocase SecG subunit, score 3.5e-21" misc_feature complement(order(2098728..2098787,2098881..2098949)) /gene="secG" /locus_tag="CMS_1985" /old_locus_tag="CMS1985" /note="2 probable transmembrane helices predicted for CMS1985 by TMHMM2.0 at aa 4-26 and 58-77" gene complement(2099100..2099903) /gene="tpiA" /locus_tag="CMS_1986" /old_locus_tag="CMS1986" /db_xref="GeneID:6158985" CDS complement(2099100..2099903) /gene="tpiA" /locus_tag="CMS_1986" /old_locus_tag="CMS1986" /EC_number="5.3.1.1" /note="Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="YP_001710679.1" /db_xref="GI:170782346" /db_xref="GeneID:6158985" /translation="MAVTHRPQGRTPLIAGNWKMNLDHLQAIAFAQKLAWSLKDAKHD YAEAEVAVFPPATDIRSVQTLVSADKLELAYGAQDVSEHESGAYTGEISAAFLAQLAC RYVIVGHSERRTLHGETDEQVAAKSAAAVKHGIVPVICVGETAADLEEHGASAVPVAQ LRVALQGLEKGADVVVAYEPVWAIGSGQAATPEQAQQVAAPLRAVVAELLGDEAAKAT RILYGGSVKSGNIAGFLREPDVDGALVGGASLDVQEFSAIARFRSHVGV" misc_feature complement(2099115..2099846) /gene="tpiA" /locus_tag="CMS_1986" /old_locus_tag="CMS1986" /inference="protein motif:HMMPfam:PF00121" /note="HMMPfam hit to PF00121, Triosephosphate isomerase,score 4e-96" gene complement(2099894..2101108) /gene="pgk" /locus_tag="CMS_1987" /old_locus_tag="CMS1987" /db_xref="GeneID:6159020" CDS complement(2099894..2101108) /gene="pgk" /locus_tag="CMS_1987" /old_locus_tag="CMS1987" /EC_number="2.7.2.3" /note="Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="YP_001710680.1" /db_xref="GI:170782347" /db_xref="GeneID:6159020" /translation="MALRTIDSLGDLRGRRVIVRCDLNVPLKGGVIGDDGRIRASLGT LTGLREAGARVIVISHLGRPDGTPDEKYSLRPVAARLGELLRADVAFADDTVGDSARA AVEALGDGDVVVLENLRFHAEETSKDETVRRGFAESIAELGDAFVSDGFGVVHRKQAS VFELAQALPSAAGSLIASELEVLDRLTENPERPYTVVLGGSKVSDKLGVIGHLLPRVD SLLIGGGMLFTFLKAQGHEVGASLLEEDQVETVKGYLAEAEERGVKIVLPTDVVVADG FSADAAHEVTRADAIEGTPAGAKGLGLDIGPETADAFATIIRGSTTVFWNGPMGVFEL EPFAAGTKTVADALTRVEGLSVVGGGDSAAAVRALGFDDDRFGHISTGGGASLEFLEG KRLPGLEVLGWQ" misc_feature complement(2099897..2101108) /gene="pgk" /locus_tag="CMS_1987" /old_locus_tag="CMS1987" /inference="protein motif:HMMPfam:PF00162" /note="HMMPfam hit to PF00162, Phosphoglycerate kinase,score 3.1e-198" misc_feature complement(2101031..2101063) /gene="pgk" /locus_tag="CMS_1987" /old_locus_tag="CMS1987" /note="PS00111 Phosphoglycerate kinase signature." gene complement(2101115..2102122) /gene="gap" /locus_tag="CMS_1988" /old_locus_tag="CMS1988" /db_xref="GeneID:6158861" CDS complement(2101115..2102122) /gene="gap" /locus_tag="CMS_1988" /old_locus_tag="CMS1988" /EC_number="1.2.1.12" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="YP_001710681.1" /db_xref="GI:170782348" /db_xref="GeneID:6158861" /translation="MTVKIGINGFGRIGRNYFRAALAKGSDIEIVAVNDLTDNKALAH LLKYDSITGRLDATVELDGDNIVVNGKAIRVLEERDPANLPWGELGVEIVIESTGRFT KAEDARKHITAGAKKVLVSAPATGDNVTTLVLGVNEGTYDPATHDVISNASCTTNCLA PLAKVFLDEFGIERGLMTTVHAYTADQNLQDGPHSDLRRARAAAVNIIPTSTGAAKAL GLVIPELVGRLDGYALRVPVPTGSITDLTIETSANVTVEQVNAAYKAAAEGPLKGILK YTEDPIVSSDIVNDPHSSIFDAGLTKVIGNQVKVASWYDNEWGYSNRLVDLTEYVADR L" misc_feature complement(2101181..2101660) /gene="gap" /locus_tag="CMS_1988" /old_locus_tag="CMS1988" /inference="protein motif:HMMPfam:PF02800" /note="HMMPfam hit to PF02800, Glyceraldehyde 3-phosphate dehydrogenase, score 4.1e-110" misc_feature complement(2101646..2101669) /gene="gap" /locus_tag="CMS_1988" /old_locus_tag="CMS1988" /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site." misc_feature complement(2101661..2102116) /gene="gap" /locus_tag="CMS_1988" /old_locus_tag="CMS1988" /inference="protein motif:HMMPfam:PF00044" /note="HMMPfam hit to PF00044, Glyceraldehyde 3-phosphate dehydrogenase, score 2e-94" gene complement(2102250..2102876) /gene="sodB" /locus_tag="CMS_1989" /old_locus_tag="CMS1989" /db_xref="GeneID:6158708" CDS complement(2102250..2102876) /gene="sodB" /locus_tag="CMS_1989" /old_locus_tag="CMS1989" /EC_number="1.15.1.1" /codon_start=1 /transl_table=11 /product="superoxide dismutase Fe-Zn" /protein_id="YP_001710682.1" /db_xref="GI:170782349" /db_xref="GeneID:6158708" /translation="MADYTLIDLPYDYSALEPSISGRIMELHHDKHHKTYVDGANTAL VKLQEARDAGDLTFVNKLQKDLAFNLAGHVNHTVFWNNLSPDGGDKPTGELAAAIDEF FGSYDKFQAHFTASALGIQGSGWSILAWDSLGQKLIIEQLYDHQGNLAAATVPILLLD MWEHAFYLDYVNVKADYVKAFWNIVNWADVQARFDAARTKTQGLFLLS" misc_feature complement(2102295..2102615) /gene="sodB" /locus_tag="CMS_1989" /old_locus_tag="CMS1989" /inference="protein motif:HMMPfam:PF02777" /note="HMMPfam hit to PF02777, Manganese and iron superoxide dismutase, score 1.4e-57" misc_feature complement(2102376..2102399) /gene="sodB" /locus_tag="CMS_1989" /old_locus_tag="CMS1989" /note="PS00088 Manganese and iron superoxide dismutases signature." misc_feature complement(2102625..2102804) /gene="sodB" /locus_tag="CMS_1989" /old_locus_tag="CMS1989" /inference="protein motif:HMMPfam:PF00081" /note="HMMPfam hit to PF00081, Manganese and iron superoxide dismutase, score 1.1e-18" gene complement(2103045..2104025) /locus_tag="CMS_1990" /old_locus_tag="CMS1990" /db_xref="GeneID:6158994" CDS complement(2103045..2104025) /locus_tag="CMS_1990" /old_locus_tag="CMS1990" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710683.1" /db_xref="GI:170782350" /db_xref="GeneID:6158994" /translation="MPLTSDVKEELSRVEVSKTTVRAAELATILRFSGGLHLISNRIA VESELDTPLLARRVRKDLAELYGVRSDISVIPASGMRRATHYLVRVMEGGETLARQTG LLDARRRPIRGLPNRLTTGSREEIAAVWRGAFLAAGTLTDPGRSAALEVTCPGNEAAM ALVGAAGRLDVSAKAREVRGVHRVVIRDGDAIGQMLRAMGAQGTVVNWEEMRQRREVR ATANRLVNFDDANLRRSAQAAVAACARVERAMEILGPDIPEHLKYAGDLRLRFRDSSL DELGHHADPPMTKDAVAGRIRRLLAMADKKAVDEGLPGTDANLPADLDDV" misc_feature complement(2103114..2104019) /locus_tag="CMS_1990" /old_locus_tag="CMS1990" /inference="protein motif:HMMPfam:PF02650" /note="HMMPfam hit to PF02650, Protein of unknown function DUF199, score 8.6e-106" gene complement(2104055..2104942) /locus_tag="CMS_1991" /old_locus_tag="CMS1991" /db_xref="GeneID:6157685" CDS complement(2104055..2104942) /locus_tag="CMS_1991" /old_locus_tag="CMS1991" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710684.1" /db_xref="GI:170782351" /db_xref="GeneID:6157685" /translation="MHARMSVEIPQQDVMIVTGMSGAGRSTVGNALEDLGWYVVDNLP PQMLKPLVELAGRAGTSLPKIAAVVDVRGGDFFSELRDILHTFGTGPRLRVLFLEATD AALVRRFEQVRRPHPLQGNGTLLDGIAAERARMIEIREASDLVIDTSELNIHQLATTI TEQFSGADDAGVRVTVMSFGFKYGTPADADMVADMRFLPNPFWTPELRPLTGRDKAVS DYVLGQEGAEEFVHAYARALAPVLAGYQRENKRHATIAIGCTGGKHRSVAVSEELSSL LRALPGVAVSTKHRDLGRE" misc_feature complement(2104058..2104906) /locus_tag="CMS_1991" /old_locus_tag="CMS1991" /inference="protein motif:HMMPfam:PF03668" /note="HMMPfam hit to PF03668, Uncharacterised P-loop ATPase protein UPF0042, score 3e-124" gene complement(2105007..2106935) /gene="uvrC" /locus_tag="CMS_1992" /old_locus_tag="CMS1992" /db_xref="GeneID:6157686" CDS complement(2105007..2106935) /gene="uvrC" /locus_tag="CMS_1992" /old_locus_tag="CMS1992" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="YP_001710685.1" /db_xref="GI:170782352" /db_xref="GeneID:6157686" /translation="MARTDTVGYRPAAGEIPTSPGVYRFRDAADRVLYVGKANNLRAR LANYFAPLESLHERTRRMVTSAAGVEWTVVGSEFEALQLEFTWIKEFDPPFNVKFRDD KSYPYLAVTMGEDYPRVMVTRNRKIRGAKYFGPYTKVWAIRETVDHLLKVFPMRSCSE STFKRARQTNRPCLLGDIGRCAAPCVGRFSQEEHRDIVDDFASFMAGNDSKYVGQLTQ RMKDAAAEMDYEAAARHRDDIGALEAALSKTAVVFDDRVDADVFGIAADELAAAVQQF MVRGGRIRGTRTWVVDKELDIGIGELVETVLHNAYEDEAHPPREVLVPELPADAAELE LWLSQRRAAGEDDGSVRRGRPSSWQVDLRVAQRGDKAALAHTAATNAQNALMLYKTRR SSDFTTRSKALADIQEALGMPDAPLRMECYDVSHLSGTNIVASMVVFEDGLPRKDQYR RFNIADSTDDTESIHQVITRRLAYLGKEAEVPADAAPPELGEAPPVNKFSYSPNLLIV DGGQPQVAAAQRALEESGVTGIQLAGIAKRLEEIWLPDSDYPIILPRNSDALFLIQRI RDEAHRFAITHQRARRKRDITSVLNEIPGLGPSRVQRLLQQFGSVAKLKQAEVEEIAA VRTIGPTLAQAVYERLRS" misc_feature complement(2106201..2106308) /gene="uvrC" /locus_tag="CMS_1992" /old_locus_tag="CMS1992" /inference="protein motif:HMMPfam:PF02151" /note="HMMPfam hit to PF02151, UvrB/UvrC protein, score 2.2e-08" misc_feature complement(2106630..2106881) /gene="uvrC" /locus_tag="CMS_1992" /old_locus_tag="CMS1992" /inference="protein motif:HMMPfam:PF01541" /note="HMMPfam hit to PF01541, Excinuclease ABC, C subunit, N-terminal, score 4.5e-25" gene complement(2106935..2109856) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /db_xref="GeneID:6159092" CDS complement(2106935..2109856) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="YP_001710686.1" /db_xref="GI:170782353" /db_xref="GeneID:6159092" /translation="MSISPVESSSLLSVRGARVHNLRDVDLDIPRDSLVVFTGLSGSG KSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNP RSTVGTITEIFDYMRLLWARIGVAHCPVCGERISRQTVQQIADQLMELETGTRYQIVS PIVSQKKGEFVDLFAELASGGYSRAIVDGELIQLSSPPKLKKQYKHDISVVVDRLVAS DDILGRLTDSLETALRLTDGIVMIDFVDVDGPGGLQTYSEKLSCPNNHPIQLTEIEPR TFSFNAPFGACPECSGLGTRMSVDQELLIGDESLSIADGVILPWTTQGKGLFQYYEKL LAGLARDLKFSLTTPWRKLSEEVREAVLRGNDFEVQVKWKNRYGREMTYSSGFEGVMP YIERQFAQAETDNQRARWGEYLREIPCPVCDGKRLKPEVLAVLVHGANIADVAEMSLS DAQEFMAQLELTDREAHIAAQVLREIRVRLEFLIEVGLNYLNLARAAASLSGGEAQRI RLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIETLVKLRDLGNTLIVVEHDEDTIRT ADWIVDIGPGAGVNGGKVVHSGSYEGLIENRESLTGDYLAGRRAIATPAKRRKIDKKR QIQVVGARANNLQNVTATFPLGTLTAVTGVSGSGKSSLVNDILYRVLANELNGARKVP GKHSRVTGLENLDKVVHVDQNPIGRTPRSNPATYTGVFDRIRNLFAETTEAKARGYLP GRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGGARYNRDTLSVHYKGKSIA EVLDMSISEAAEFFEPIQAIHRFMKTLVDVGLGYVRLGQSATTLSGGEAQRVKLSTEL QRRSNGRSIYVLDEPTTGLHFEDVRKLLLVLNGLVDKGNTVIVIEHNLDVIKSADWLI DMGPEGGAGGGTVLATGTPEHLATVPESYTGGFLKEVLDAEAEAAAIESQRAREERAA G" misc_feature complement(2107106..2107921) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.9e-33" misc_feature complement(2107289..2107333) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /note="PS00211 ABC transporters family signature." misc_feature complement(2107877..2107900) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2108129..2108587) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.5e-07" misc_feature complement(2108315..2108359) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /note="PS00211 ABC transporters family signature." misc_feature complement(2109719..2109742) /gene="uvrA" /locus_tag="CMS_1993" /old_locus_tag="CMS1993" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2109938..2112004) /gene="uvrB" /locus_tag="CMS_1994" /old_locus_tag="CMS1994" /db_xref="GeneID:6159089" CDS complement(2109938..2112004) /gene="uvrB" /locus_tag="CMS_1994" /old_locus_tag="CMS1994" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="YP_001710687.1" /db_xref="GI:170782354" /db_xref="GeneID:6159089" /translation="MQPTRSVRPFKVVSDYSPSGDQPTAIAELAGRVNAGEPDVVLLG ATGTGKSATAAWLIEKVQRPTLILAHNKTLAAQLATEFRELMPDNAVEYFVSYYDYYQ PEAYVPQTDTFIEKDSSVNAEVERLRHSTTNSLLSRRDVVVVSTVSCIYGLGQPEQYM NAMVALQVGMQINRDTLIRKFVSMQYQRNDVDFSRGNFRVRGDTIEIIPMYEELAIRI EMFGDEIEALYQLHPLTGDVVRKMDAVSVFPGSHYVAETEVMQRAIGTIQQELEERLA VLEREGKLLEAQRLRMRTNFDIEMMQQIGFCSGIENYSRHIDGRDAGEAPHCLLDYFP DDFLVVIDESHVTVPQIGAMFEGDSSRKRTLVEHGFRLPSALDNRPLKWNEFTERVPQ TVYMSATPGKYELGMGDGVVEQIIRPTGLIDPAIVVKPTKGQIDDLLEQIRIRVEKDE RILVTTLTKKMAEELTDYFAEAGVRVRYLHSDVDTLRRVELLSELRAGVYDVLVGINL LREGLDLPEVSLVAILDADKEGFLRSSTSLIQTIGRAARNVSGEVHMYADVLTDSMKR AIEETDRRREKQVAYNTEHGIDPTPLRKRIADITEILAREGEDTKKMLEGRGGGKRSP TPNLRREGKAAAGANELETIISDLNDQMLQAAGELKFELAARLRDELGDLKRELRQME KAGHLS" misc_feature complement(2109974..2110081) /gene="uvrB" /locus_tag="CMS_1994" /old_locus_tag="CMS1994" /inference="protein motif:HMMPfam:PF02151" /note="HMMPfam hit to PF02151, UvrB/UvrC protein, score 3e-10" misc_feature complement(2110358..2110603) /gene="uvrB" /locus_tag="CMS_1994" /old_locus_tag="CMS1994" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 3.4e-18" misc_feature complement(2111852..2111875) /gene="uvrB" /locus_tag="CMS_1994" /old_locus_tag="CMS1994" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2112014..2112628) /gene="coaE" /locus_tag="CMS_1995" /old_locus_tag="CMS1995" /db_xref="GeneID:6159091" CDS complement(2112014..2112628) /gene="coaE" /locus_tag="CMS_1995" /old_locus_tag="CMS1995" /EC_number="2.7.1.24" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="YP_001710688.1" /db_xref="GI:170782355" /db_xref="GeneID:6159091" /translation="MQVIGLTGGIAAGKTVVADRLAELGAARIDADRLAREVVEPGTP ALAEIARRFGPGVIAPDGSLDRPALGAIVFQDPDARRDLEAITHPAVRALSAQRMAAA AEADADAVVVYDIPLLVESGRVDEFDRIVMVHAPREERIRRLVELRGMSPEEAERRIA SQASDEERLAVADEVVDSGISLASTLEQTDRLWANLSGDVGGRS" misc_feature complement(2112077..2112625) /gene="coaE" /locus_tag="CMS_1995" /old_locus_tag="CMS1995" /inference="protein motif:HMMPfam:PF01121" /note="HMMPfam hit to PF01121, Dephospho-CoA kinase, score 2.7e-73" misc_feature complement(2112356..2112445) /gene="coaE" /locus_tag="CMS_1995" /old_locus_tag="CMS1995" /note="PS01294 Uncharacterized protein family UPF0038 signature." misc_feature complement(2112584..2112607) /gene="coaE" /locus_tag="CMS_1995" /old_locus_tag="CMS1995" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2112784..2114238) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /db_xref="GeneID:6158641" CDS complement(2112784..2114238) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /note="in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /protein_id="YP_001710689.1" /db_xref="GI:170782356" /db_xref="GeneID:6158641" /translation="MTIATTDKAPKQVAINDIGSAEDFLAAVEKTLKFFNDGDLIEGT VVKIDRDEVLIDVGYKTEGVIPSRELSIKHDVDPTEVVKVGDTVEALVLQKEDKEGRL ILSKKRAQYERAWGDVEKIKESDGVVTGTVIEVVKGGLIVDIGLRGFLPASLIELRRV RDLTPYLGQEIEAKILELDKNRNNVVLSRRALLEQTQSESRSTFLNNLQKGQVRKGVV SSIVNFGAFVDLGGVDGLVHVSELSWKHIEHASEVVEVGQEVTVEILEVDLDRERVSL SLKATQEDPWQVFARTHAIGQVAPGKVTKLVPFGAFVRVAEGIEGLVHISELSGKHVE LAEQVVSVGDEVFVKVIDIDLERRRISLSLKQANDGVDPEGTEFDPALYGMLTEYDDQ GNYKYPEGFDPETNEWKEGFESQRETWEQQYAAAQARWEAHKKQVAAAAEAEAADTGI TSAGPGFTSDSTGAGTLADDESLAALREKLSSSK" misc_feature complement(2113144..2113365) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 1.7e-26" misc_feature complement(2113402..2113620) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 2e-32" misc_feature complement(2113669..2113878) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 1.9e-18" misc_feature complement(2113918..2114139) /gene="rpsA" /locus_tag="CMS_1996" /old_locus_tag="CMS1996" /inference="protein motif:HMMPfam:PF00575" /note="HMMPfam hit to PF00575, RNA binding S1, score 2.5e-18" gene complement(2114437..2116116) /locus_tag="CMS_1997" /old_locus_tag="CMS1997" /db_xref="GeneID:6158964" CDS complement(2114437..2116116) /locus_tag="CMS_1997" /old_locus_tag="CMS1997" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710690.1" /db_xref="GI:170782357" /db_xref="GeneID:6158964" /translation="MTTTPRAPRPQTDIDRIAEGWIDASLDLHPEERVYLGRPGREGE YGDTSPAGHAAHAEAARAVVRQLAQATPADAVDEVTRMDLTRELELDVEMHDAGVHLS DLNVIASPAQGIREVFDISPTSTEGDWEHIATRLGNVAGAVDGYIETLREGIRRGQVP AKRQVREVLGQVERQAAPDGFFRSFADEARPDAGELPASLRHDLGARAEEARSAYERL AAFLGSELEPAGRVADAVGREQYALRSRSFLGAEVDLDETYEWGVGELARMVEEQESI AREILPGASVLEAIAHLDGDASRKLHGTDALRAWMQETSDRAVEELGRTHFDIPEEIR ALECMIAPTQEGGIYYSGPADDFSRPGRMWWSVPEGVTEFDTWRELTTVYHEGVPGHH LQIAQATYNKAELNTWRRFAGTSGHAEGWALYAERLMQELGYLDDPADRLGMLDGQRM RAARVVLDIGVHLGKARPDGDGVWDAGYAFDFMGRNVNMDPSFVRFEVNRYLGWPGQA PSYKVGQRIWEDLRDETRRREGDAFDIREFHRRALDVGGVGLDTLRAAVLR" misc_feature complement(2114440..2116032) /locus_tag="CMS_1997" /old_locus_tag="CMS1997" /inference="protein motif:HMMPfam:PF05960" /note="HMMPfam hit to PF05960, Bacterial protein of unknown function DUF885, score 2e-109" gene complement(2116113..2116571) /gene="fruB" /locus_tag="CMS_1998" /old_locus_tag="CMS1998" /db_xref="GeneID:6157687" CDS complement(2116113..2116571) /gene="fruB" /locus_tag="CMS_1998" /old_locus_tag="CMS1998" /EC_number="2.7.1.-" /codon_start=1 /transl_table=11 /product="multiphosphoryl transfer protein" /protein_id="YP_001710691.1" /db_xref="GI:170782358" /db_xref="GeneID:6157687" /translation="MTKARLSDLLADGSIRLDAHADDRESAIRQAGEALVAAGAVEPG YVEAMVERERSVSTFVGEGVAVPHGTLAAGRDLVRADAISLLRLPDGVDWDGHDVRIV IGIAATGGGHIALLSRLAEILLDPVRAEQLRGATEPATVRSLLGAATVEG" misc_feature complement(2116128..2116448) /gene="fruB" /locus_tag="CMS_1998" /old_locus_tag="CMS1998" /inference="protein motif:HMMPfam:PF00359" /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, score 3.2e-17" misc_feature complement(2116224..2116256) /gene="fruB" /locus_tag="CMS_1998" /old_locus_tag="CMS1998" /note="PS00626 Regulator of chromosome condensation (RCC1) signature 2." misc_feature complement(2116365..2116415) /gene="fruB" /locus_tag="CMS_1998" /old_locus_tag="CMS1998" /note="PS00372 PTS EIIA domains phosphorylation site signature 2." gene complement(2116621..2119305) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /db_xref="GeneID:6158695" CDS complement(2116621..2119305) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /EC_number="2.7.7.7" /note="has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair" /codon_start=1 /transl_table=11 /product="DNA polymerase I" /protein_id="YP_001710692.1" /db_xref="GI:170782359" /db_xref="GeneID:6158695" /translation="MPNTEKPTLLVIDGHSLAFRAFYALPAESFQNREGQHTNAVHGF IAMLINLLQKEKPTHVGVAFDISRFSFRTREYPGYKGTRGETPVEFTGQVPLLERALK TMNIPTLTKEDHEADDILATLATQGREQGFRVLVVSGDRDAIQLVNDDVTLLYPSTQG VSQLTRYDAEKVFEKYGVQPGMYPDIAALVGETSDNLIGVDKVGPKTAVKWLNQYGSL DAVLEHRDEITGKVGDNLRAQYENVIRNRRLNRLLTDVELPLGPADLERKPIDEPALR EVFAVLEFKQLLDRVLKLEGSGASASSEGTPVGAVEQEPSTAPAAPRPQQLLDEELAK WIETQSAASPHGLGLTVETQDGKPVGFGLASATEAVTLPWQEGRADYAPFERWLASDA PKVMSDAKVQVKAMRRAGLRVQGLAFDVLVAGWLLRPGFTDKSLAALVSRYLMEDLPE PDANQLVPETEALTAPVEAWYTLRVEHALREVLDERTLGVMVDIEMPTLLVLVEMELR GVATDRAGLAELSAQLQERITGLAERAFAEIGKEINLGSPKQLQEVLFDQLGMPKTRA NKTGFSTDAGALADLQASNPHPFLDLLLEHRDASKLRQIIQTLERGIGDDERIHTTYV QTGTTTGRISSNDPNLQNIPVRTEEGRRIRSAIRVGEGYETLLTADYSQIEMRIMAHL SGDAGLIEAFEVGEDLHRFVGSSIFGVEPADVSPAMRTKVKAMSYGLAYGLSAFGLSK QLRIPSSEAKQLMTDYFARFGAVRDYLRQVVEEARAAGYTETIFGRRRPFPDLNSPNR VLRDNAERAALNAPIQGSAADIMKIAMIRIEADMRERDMASRMLLQVHDELILEVAPG EWDALQAIVTDRMAHAADLRVPLEVQVGRGDSWAAAAH" misc_feature complement(2116630..2117772) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /inference="protein motif:HMMPfam:PF00476" /note="HMMPfam hit to PF00476, DNA-directed DNA polymerase, score 9e-158" misc_feature complement(2117092..2117151) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /note="PS00447 DNA polymerase family A signature." misc_feature complement(2118475..2118774) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /inference="protein motif:HMMPfam:PF01367" /note="HMMPfam hit to PF01367, 5'-3' exonuclease, score 2.7e-29" misc_feature complement(2118778..2119287) /gene="polA" /locus_tag="CMS_1999" /old_locus_tag="CMS1999" /inference="protein motif:HMMPfam:PF02739" /note="HMMPfam hit to PF02739, 5'-3' exonuclease, score 3.8e-73" gene 2119360..2119794 /locus_tag="CMS_2000" /old_locus_tag="CMS2000" /db_xref="GeneID:6158872" CDS 2119360..2119794 /locus_tag="CMS_2000" /old_locus_tag="CMS2000" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710693.1" /db_xref="GI:170782360" /db_xref="GeneID:6158872" /translation="MTQPAPEDDTAARLVRQPQDVGALAQKMGIVFHELSPERSVATM PAEGNTQPYGVVHGGAYVVLAESLGSMSANVHAGPDRVAFGIELNASHTRSASTGTIT GTCTAIHLGGTLTTHEIVMTDDEGRRLSTVRITNIIRERSRR" misc_feature 2119516..2119749 /locus_tag="CMS_2000" /old_locus_tag="CMS2000" /inference="protein motif:HMMPfam:PF03061" /note="HMMPfam hit to PF03061, Thioesterase superfamily,score 1.5e-12" gene 2119931..2120893 /locus_tag="CMS_2001" /old_locus_tag="CMS2001" /db_xref="GeneID:6157688" CDS 2119931..2120893 /locus_tag="CMS_2001" /old_locus_tag="CMS2001" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710694.1" /db_xref="GI:170782361" /db_xref="GeneID:6157688" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRVPRSTVE RVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 2120003..2120068 /locus_tag="CMS_2001" /old_locus_tag="CMS2001" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2120327..2120869 /locus_tag="CMS_2001" /old_locus_tag="CMS2001" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" gene complement(2120904..2121866) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /db_xref="GeneID:6157689" CDS complement(2120904..2121866) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710695.1" /db_xref="GI:170782362" /db_xref="GeneID:6157689" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2120916..2121458) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(2121543..2121608) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2121608..2121729) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2121729..2121794) /locus_tag="CMS_2002" /old_locus_tag="CMS2002" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2121964..2122572) /locus_tag="CMS_2003" /old_locus_tag="CMS2003" /db_xref="GeneID:6157690" CDS complement(2121964..2122572) /locus_tag="CMS_2003" /old_locus_tag="CMS2003" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001710696.1" /db_xref="GI:170782363" /db_xref="GeneID:6157690" /translation="MSDQEATPAAPRRVVVAEDESLIRLDIVETLRDNGFEVVGEAGD GETAVALATELRPDLVIMDVKMPQLDGISAAERLNRNHIAPVVLLTAFSQKELVERAG EAGALAYVVKPFTPNDLLPAIEIALARYAQIITLEAEVSDLVERFETRKLVDRAKGLL NEKMGLTEPEAFRWIQKASMDRRLTMHDVAQAIIEQLSAKKA" misc_feature complement(2121991..2122158) /locus_tag="CMS_2003" /old_locus_tag="CMS2003" /inference="protein motif:HMMPfam:PF03861" /note="HMMPfam hit to PF03861, ANTAR, score 2.8e-22" misc_feature complement(2122180..2122539) /locus_tag="CMS_2003" /old_locus_tag="CMS2003" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 9.9e-32" gene 2122657..2122739 /locus_tag="CMS_r029" /old_locus_tag="CMSr029" /db_xref="GeneID:6157691" tRNA 2122657..2122739 /locus_tag="CMS_r029" /old_locus_tag="CMSr029" /product="tRNA-Leu" /db_xref="GeneID:6157691" gene complement(2122837..2124294) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /db_xref="GeneID:6159046" CDS complement(2122837..2124294) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /EC_number="2.7.1.40" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /protein_id="YP_001710697.1" /db_xref="GI:170782364" /db_xref="GeneID:6159046" /translation="MTRRAKIVATLGPATSSYESIRAIIDAGVDVARMNLSHGTYDVH EGIYSTIRKAADDAGRAVAVLVDLQGPKIRLGKFSDGPHDLAFGDTFVITVEDILGTK DICSTTYKGLPGDVKPGDPLLIDDGKVTLRVVSTDGTRVTTTVEVAGTVSNNKGINLP GVAVNVPALSGKDEADLRWGLRLGADLIALSFVRDASDIVRVHEIMDEEGRRVPVVAK VEKPQAVDALEEIVDAFDAIMVARGDLGVELPLEAVPIVQKRAVELARRKAKPVIVAT QMLESMITSPRPTRAEASDCANAVLDGADALMLSGETSVGEFPVVTVKTMARIIESTE EHGLERIPKLGTRPFTQGGAITLAAAEVAEFVDAKALCVFTESGDSVRRMTRLRNGIP ILAFTPNEGIRRRLALSWGVQTYLVEPVTHTDQMFHQVDDVLLAEGLAEGLAEVGQKV VVIAGSPPGIAGSTNELRVHVVGDAVNEAAPAYEK" misc_feature complement(2122882..2123235) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /inference="protein motif:HMMPfam:PF02887" /note="HMMPfam hit to PF02887, Pyruvate kinase, score 4.3e-13" misc_feature complement(2123074..2123103) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /note="PS00215 Mitochondrial energy transfer proteins signature." misc_feature complement(2123266..2124291) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /inference="protein motif:HMMPfam:PF00224" /note="HMMPfam hit to PF00224, Pyruvate kinase, score 1.1e-140" misc_feature complement(2123620..2123658) /gene="pyk" /locus_tag="CMS_2004" /old_locus_tag="CMS2004" /note="PS00110 Pyruvate kinase active site signature." gene complement(2124382..2125839) /gene="gltD" /locus_tag="CMS_2005" /old_locus_tag="CMS2005" /db_xref="GeneID:6158906" CDS complement(2124382..2125839) /gene="gltD" /locus_tag="CMS_2005" /old_locus_tag="CMS2005" /note="glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate" /codon_start=1 /transl_table=11 /product="glutamate synthase subunit beta" /protein_id="YP_001710698.1" /db_xref="GI:170782365" /db_xref="GeneID:6158906" /translation="MADPKGFLKVTERELPKRRPVSVRLMDWKEVYEQQERGELVRQA GRCMDCGIPFCHQGCPLGNLIPEWNDLTWRGEGRQAIERLHATNNFPEFTGRLCPAPC ESSCVLGINQPPVTIKQVEVSIIDDAFQKGWVEPHPPERLTGKTVAVVGSGPAGLAAA QQLTRAGHTVAVFERDDRIGGLLRYGIPDFKMEKRHLEARLAQMTAEGTRFRAGVDIG KDITWSDLRLRYDAVVVCTGALVPRDLDIPGRDVDGVHFAMDYLRQSNHATAGDQVPE QIHAEGKHVVVLGGGDTGADCIGTAHRQKAASVTNLAIGQQPPTERRPDQPWPTYPTL FEVSSAHEEGGERHYLATTVEFLKDDDGHVRAVRVAETEFRDGRRVPKSGTEREIPAD LVLLALGFTGPEKAALETQLEVPFDERGNVARGEDYQTDQAGVFVAGDAGRGQSLIVW AIAEGRSAASAVDRYLEGDTELPFPVRPTDRALSI" misc_feature complement(2124490..2125404) /gene="gltD" /locus_tag="CMS_2005" /old_locus_tag="CMS2005" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.8e-24" misc_feature complement(2125462..2125527) /gene="gltD" /locus_tag="CMS_2005" /old_locus_tag="CMS2005" /note="PS00445 FGGY family of carbohydrate kinases signature 2." gene complement(2125832..2130403) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /db_xref="GeneID:6157692" CDS complement(2125832..2130403) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /codon_start=1 /transl_table=11 /product="putative glutamate synthase alpha subunit" /protein_id="YP_001710699.1" /db_xref="GI:170782366" /db_xref="GeneID:6157692" /translation="MAFSSTSPPGGSFPATQGLYDPAFEKDACGLAMVATLRGTPGHD IIVNALDALRNLEHRGAIGSDAGTGDGAGIMTQIPDEFLRGVVGFDLPPMGEYAVGMA FLPTDDAEREELEAGIERIAGDERLHVLGWREVPVDPSHLGNLARKAMPAFRQLFLTS DSAQPSDRPSGLALDRLAFRLRKRAERELGAYFISLSSRTLVYKGMVTTLQLEPFYPD LSDERFASKLAIVHSRYSTNTFPSWPLAQPLRMMAHNGEINTVAGNRNWMRARQSQLE SELLGDLAPLMPIVTPGASDSASFDEVLELLSLSGRSLPHAMMMMVPEAWEKQTDIDP VRRDFYEYHSMVMEPWDGPAALTFTDGTLVGATLDRNGLRPGRYLVTHDGLVVLGSEI GVLEIDPARIMRKGRLRPGKMFLVDTEAGRIIEDDEIKSQLAASAPWGEWLENRIHLA DLPEREHVVHTPASVVRRQRTFGYTEEEVRMLVMPMAKVGAEPLGAMGSDTPIAVLSQ RPRLLFDYFTQQFAQVTNPPLDSIREEVVTSLRLGLGPQRNLLDAGPEHTKQVVLDFP VIDNDELAKVIHIDHRPGSRTTTIVSGLYRVDDGPLAMQKRIDAMCDEVDRAIAHGAQ FVVLSDRDSNRDLAPIPSLLMIAAVHHHLIRKQTRMKVGIVVEAGDVREVHHIALLIG YGASAINPYLAMESCEDLVRSGMLTGVTPEKATRNLIKGLGKGVLKIMSKMGISTVSS YAGAQCFEAVGLSQGLVDQYFSGTTTRLGGVGIDVIAAENAARHRSAYPQDGAVLSHE RLQTGGEYQWRRDGSPHLFNPDTIFRLQHATRTRRYDIFREYTSMVDAQSKDLMTLRG MFRLKTGTRPPVPLDEVEPISDIVKRFSTGAMSYGSISEEAHETLAIAMNRLGAKSNT GEGGENVERLLDPERRSSIKQVASGRFGVTSMYLTHADDIQIKLAQGAKPGEGGQLPP GKVYPWVARTRHATAGVGLISPPPHHDIYSIEDLKQLIFDLKRANPSARIHTKLVSQS GIGAVAAGVAKALSDVILVSGHDGGTGASPVNSLKHAGTPWELGLAETQQTLRLNGMR DRVVVQVDGQMKSGRDVIVGALLGAEEFGFATAPLVVSGCIMMRVCHLDTCPVGVATQ NPELRKRFPGKADHVVNFFEFIAQEVREHLAALGYRALDEIVGRNDLLGVEDAVDHWK ASGLDLTPILAGPTFADDEPMKHSRSQDHELDDHFDNELIRLSRDVLDHGGRVEIDLP VRNTARAVGTMLGHLVTKGHGEDGLPTGSIDVTLRGSAGQSFGAFMPSGITLRLVGDS NDYLGKGLSGGDIVVRPDERAGFPAEENVIAGNVIGYGATQGTMFIRGMVGERFLVRN SGATAVVEAVGDHALEYMTGGLALVLGGTGRNIGAGMSGGTAYVIDLDRDRINTDALA SGELELHPLGSADAEIVLDLLRRHLAETGSTVAERLLAEPETSMERFTKILPRDYAAV LATRQTAVDEGLDPDGDVAWNRILEVTGG" misc_feature complement(2126069..2126629) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /inference="protein motif:HMMPfam:PF01493" /note="HMMPfam hit to PF01493, Glutamate synthase, alpha subunit, C-terminal, score 2.6e-77" misc_feature complement(2126858..2127961) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /inference="protein motif:HMMPfam:PF01645" /note="HMMPfam hit to PF01645, Ferredoxin-dependent glutamate synthase, score 1.4e-211" misc_feature complement(2128142..2129011) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /inference="protein motif:HMMPfam:PF04898" /note="HMMPfam hit to PF04898, Glutamate synthase,central, score 6.6e-167" misc_feature complement(2129045..2130319) /locus_tag="CMS_2006" /old_locus_tag="CMS2006" /inference="protein motif:HMMPfam:PF04897" /note="HMMPfam hit to PF04897, Glutamate synthase,amidotransferase region, score 6.8e-272" gene complement(2130505..2131539) /gene="lgt" /locus_tag="CMS_2007" /old_locus_tag="CMS2007" /db_xref="GeneID:6157693" CDS complement(2130505..2131539) /gene="lgt" /locus_tag="CMS_2007" /old_locus_tag="CMS2007" /EC_number="2.4.99.-" /note="transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /protein_id="YP_001710700.1" /db_xref="GI:170782367" /db_xref="GeneID:6157693" /translation="MFVPMSIPSPDPSDTRFDVTAWLQGFGIDLPLTFVIHAYAVCIL VGILVAAFLTNRRLVARGVESGTVIDFTLCALVLGIIGARAFHVLTHPGDYFYEGANL WRVLYVWEGGIAIFGALIGGAVGVWLGSKWTGVRFWTFADALAPGLLLAQAAGRMGNY FNQELFGTPTTLPWGLEVDPTNAAFPAGLPAGTLFHPTFLYEIVWNVAGALVIMALGR AVRLQWGRGLAVYLMWYGLGRMVFESIRIDPSEIFFGIRTNVWAAFLAVALGLVLFIV QTRRHVGSEPSPYLPGRTPDDVSARAKAGRDGEVASVYTDSDFADVDDDRASTGSDSH ALPATSGRGA" misc_feature complement(2130700..2131491) /gene="lgt" /locus_tag="CMS_2007" /old_locus_tag="CMS2007" /inference="protein motif:HMMPfam:PF01790" /note="HMMPfam hit to PF01790, Prolipoprotein diacylglyceryl transferase, score 5.7e-67" misc_feature complement(order(2130715..2130783,2130811..2130870, 2130889..2130957,2131072..2131140,2131159..2131227, 2131270..2131338,2131375..2131443)) /gene="lgt" /locus_tag="CMS_2007" /old_locus_tag="CMS2007" /note="7 probable transmembrane helices predicted for CMS2007 by TMHMM2.0 at aa 33-55, 68-90, 105-127, 134-156,195-217, 224-243 and 253-275" gene complement(2131599..2132417) /gene="trpA" /locus_tag="CMS_2008" /old_locus_tag="CMS2008" /db_xref="GeneID:6158790" CDS complement(2131599..2132417) /gene="trpA" /locus_tag="CMS_2008" /old_locus_tag="CMS2008" /EC_number="4.2.1.20" /note="catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /protein_id="YP_001710701.1" /db_xref="GI:170782368" /db_xref="GeneID:6158790" /translation="MTAAAHAAAPAGSPVERTIALRREQGSGALVGYLPVGFPDVATS IEAAVALVENGVDVIELGLPYSDPVMDGPVIQRATQTALAQGFRLRDGFDALHAITQR VDAPVLLMTYWNPVVQYGVERFADDIVAAGGAGLITPDLIPDEGADWLAASERTGLDR VFLAAPSSSGARLHQAVERSRGFVYAVSTMGITGARQDVDQAARGLVSRLRDAGSTSA CVGIGISTGDQVREVLDYADGAIVGSALVAALADGGVPGVARAAADLARGTALQ" misc_feature complement(2131608..2132357) /gene="trpA" /locus_tag="CMS_2008" /old_locus_tag="CMS2008" /inference="protein motif:HMMPfam:PF00290" /note="HMMPfam hit to PF00290, Tryptophan synthase, alpha chain, score 5.2e-77" gene complement(2132414..2133628) /gene="trpB" /locus_tag="CMS_2009" /old_locus_tag="CMS2009" /db_xref="GeneID:6159071" CDS complement(2132414..2133628) /gene="trpB" /locus_tag="CMS_2009" /old_locus_tag="CMS2009" /EC_number="4.2.1.20" /note="catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /protein_id="YP_001710702.1" /db_xref="GI:170782369" /db_xref="GeneID:6159071" /translation="MTDLRSVTGPYFGEFGGRYVPESLVAALDELSAAWEELKVDPAF VEELKELHRTYTGRPSLITEVPRFAEHAGGARIILKREDLNHTGSHKINNVLGQALLT KKIGKKRIIAETGAGQHGVATATAAALFGLDCVIYMGEVDTERQALNVARMRLLGAEV IPVRSGSRTLKDAINDAMRDWVTNVETTNYVFGTVAGPHPFPAMVRDLQKVIGEEARE QVLALTGRLPDAVAACVGGGSNAIGIFHAFLDDADVALYGFEAGGDGADTPRTAATIT KGRPGMLHGARSYLLQDEDGQTIDSHSISAGLDYPGVGPEHSWLSDLGRASYRPVTDD QAMSALRLLSRTEGIIPAIESAHALAGALELGKELGPDAIILINLSGRGDKDMETAGK YFDLIDAGAEQS" misc_feature complement(2132483..2133472) /gene="trpB" /locus_tag="CMS_2009" /old_locus_tag="CMS2009" /inference="protein motif:HMMPfam:PF00291" /note="HMMPfam hit to PF00291,Pyridoxal-5'-phosphate-dependent enzyme, beta subunit,score 2.7e-119" misc_feature complement(2133350..2133379) /gene="trpB" /locus_tag="CMS_2009" /old_locus_tag="CMS2009" /note="PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site." gene complement(2133625..2134401) /gene="trpC" /locus_tag="CMS_2010" /old_locus_tag="CMS2010" /db_xref="GeneID:6159072" CDS complement(2133625..2134401) /gene="trpC" /locus_tag="CMS_2010" /old_locus_tag="CMS2010" /EC_number="4.1.1.48" /note="involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water" /codon_start=1 /transl_table=11 /product="indole-3-glycerol-phosphate synthase" /protein_id="YP_001710703.1" /db_xref="GI:170782370" /db_xref="GeneID:6159072" /translation="MLGDLLSGALEDAAARRETRPLAQVEADALARPAALDALSALAP ADRVKIIAEVKRSSPSRGALAEIPDPALLASRYETGGASAISVLTEGRKFRGSLQDLE QVRDTVSIPVLRKDFIGEPYQVLEARASGADLVLLIVAALDQKTLVELHALVNELGMT ALVETHSADEVSRALDLGAQVVGVNARNLTTFELDRDLFGRLADSIPAGVVRIAESAV KTADDVAHYRRSGADVVLVGEALVTGDPVRTLGEFLDIRA" misc_feature complement(2133643..2134401) /gene="trpC" /locus_tag="CMS_2010" /old_locus_tag="CMS2010" /inference="protein motif:HMMPfam:PF00218" /note="HMMPfam hit to PF00218, Indole-3-glycerol phosphate synthase, score 1.8e-80" misc_feature complement(2134210..2134254) /gene="trpC" /locus_tag="CMS_2010" /old_locus_tag="CMS2010" /note="PS00614 Indole-3-glycerol phosphate synthase signature." gene complement(2134402..2134644) /locus_tag="CMS_2011" /old_locus_tag="CMS2011" /db_xref="GeneID:6159073" CDS complement(2134402..2134644) /locus_tag="CMS_2011" /old_locus_tag="CMS2011" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710704.1" /db_xref="GI:170782371" /db_xref="GeneID:6159073" /translation="MSTESAEPGHGNSPAAWTAVVIMLVAFTVGTIAFWFAIEPVVWA SAVLAILGWITGGVMKKMGFGVGGHRTVSTHSKAHS" misc_feature complement(order(2134468..2134521,2134534..2134602)) /locus_tag="CMS_2011" /old_locus_tag="CMS2011" /note="2 probable transmembrane helices predicted for CMS2011 by TMHMM2.0 at aa 15-37 and 42-59" gene complement(2134685..2135386) /locus_tag="CMS_2012" /old_locus_tag="CMS2012" /db_xref="GeneID:6157694" CDS complement(2134685..2135386) /locus_tag="CMS_2012" /old_locus_tag="CMS2012" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710705.1" /db_xref="GI:170782372" /db_xref="GeneID:6157694" /translation="MRVTRRTKSLALLLVLATSAATFLGWSQDWSTLRIGGQAPALVP VAGSVAAPALSALALSSLALAGALAIASRVLRVVLGILQALIGATVALTAFAAIAGPV QAGEAAVTTVTGVAGSSAVAELVDGWTTTPWGPVTLVAGIASALTGLLVAVTGPRWPT RRSRYDAPDPSPARRIVPRQDPVAAWDSLSGGADPTRREAGDDDDAPAGGPTEGSPDG PAAAPHADGRRDADR" sig_peptide complement(2134685..2134837) /locus_tag="CMS_2012" /old_locus_tag="CMS2012" /note="Signal peptide predicted for CMS2012 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.255 between residues 51 and 52" misc_feature complement(order(2134922..2134990,2135090..2135158, 2135177..2135245,2135303..2135362)) /locus_tag="CMS_2012" /old_locus_tag="CMS2012" /note="4 probable transmembrane helices predicted for CMS2012 by TMHMM2.0 at aa 9-28, 48-70, 77-99 and 133-155" gene complement(2135386..2136942) /gene="trpE" /locus_tag="CMS_2013" /old_locus_tag="CMS2013" /db_xref="GeneID:6157695" CDS complement(2135386..2136942) /gene="trpE" /locus_tag="CMS_2013" /old_locus_tag="CMS2013" /EC_number="4.1.3.27" /note="with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /protein_id="YP_001710706.1" /db_xref="GI:170782373" /db_xref="GeneID:6157695" /translation="MSESPRPAASVPAPGTTTREAFGALAVDHRVIPVLREVFADGET PVGVHRKLTAGRPGSFLLESAGQGGIWTRFSFVGVSSFGVLTQHGDEARWLDYGIDAR RALGDDAPDGPLAALAALYARWETPRIPGLPPLTGGLVGFIGWEAVRQIERLPDRPPA EVPVPGQALSFVSELAVLDHRRGTVTLVATALNDGVDAEDAMWADAQTRLDRMQADLA RPSETFLAEVDLQAQPSPVLRTEPADFHEAIARSKHHIHEGDVFQVVVSQRFDQPTMA DPIDVYRILRVLNPSPYMYLLTLEDADGKPYSIVGSSPEALVTVTDDHVYMHPIAGSR PRGATVEEDVAHEESLLADPKERAEHLMLVDLARNDMLKACAPGSVEVTEFMRVERFS HIMHLVSSVEGTLRPGVSSIDVFRATFPAGTLSGAPKPRALQIIDELEPAQRGVYGGV VGYFDFAGDADLAIAIRTATIVDGIAHVQAGGGMVADSDPDAEYLESQNKAAAPLRAV AVAEAMRRVR" misc_feature complement(2135419..2136222) /gene="trpE" /locus_tag="CMS_2013" /old_locus_tag="CMS2013" /inference="protein motif:HMMPfam:PF00425" /note="HMMPfam hit to PF00425, Anthranilate synthase component I and chorismate binding protein, score 1.6e-137" misc_feature complement(2136382..2136843) /gene="trpE" /locus_tag="CMS_2013" /old_locus_tag="CMS2013" /inference="protein motif:HMMPfam:PF04715" /note="HMMPfam hit to PF04715, Anthranilate synthase component I, N-terminal, score 4.5e-31" gene complement(2136939..2137355) /gene="hisI" /locus_tag="CMS_2014" /old_locus_tag="CMS2014" /db_xref="GeneID:6159076" CDS complement(2136939..2137355) /gene="hisI" /locus_tag="CMS_2014" /old_locus_tag="CMS2014" /EC_number="3.5.4.19" /note="PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase" /protein_id="YP_001710707.1" /db_xref="GI:170782374" /db_xref="GeneID:6159076" /translation="MSAAPLDPRGHGDPDVDGILARASFADDGLLPAVIQQHDTREVL MLGYMDREALRRTLTTGRVTFWSRSRSEYWRKGDTSGHGQYVRDAALDCDGDTVLVQV DQVGVACHTGTRTCFDADHLHPVTGARPAADEGPTP" misc_feature complement(2136999..2137223) /gene="hisI" /locus_tag="CMS_2014" /old_locus_tag="CMS2014" /inference="protein motif:HMMPfam:PF01502" /note="HMMPfam hit to PF01502, Phosphoribosyl-AMP cyclohydrolase, score 3.5e-42" gene complement(2137352..2138161) /gene="hisF" /locus_tag="CMS_2015" /old_locus_tag="CMS2015" /db_xref="GeneID:6158756" CDS complement(2137352..2138161) /gene="hisF" /locus_tag="CMS_2015" /old_locus_tag="CMS2015" /EC_number="4.1.3.-" /note="catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisF" /protein_id="YP_001710708.1" /db_xref="GI:170782375" /db_xref="GeneID:6158756" /translation="MAAVPADRPASGAPSSGDLAVRVIPCLDVAAGRVVKGVNFLDLQ DAGDPVELARLYYEQGADELTFLDVTATVEDRSTMYDVVSATAEQVFIPLTVGGGVRS ADDVARLLASGADKIGVNSAAIARPDLVSEIADRFGAQVCVLSLDVTRGDTESGFVVT THGGRTRTTIDAVAWAREAVERGAGELLVNSIDADGTRDGFDLELVAAMRAASRVPVI ASGGAGELDHFAPAIEAGADAVLAASVFHSRRFTIGDVKGALADAGQVVRR" misc_feature complement(2137406..2138098) /gene="hisF" /locus_tag="CMS_2015" /old_locus_tag="CMS2015" /inference="protein motif:HMMPfam:PF00977" /note="HMMPfam hit to PF00977, Histidine biosynthesis protein, score 1.7e-115" gene complement(2138164..2139003) /gene="hisG" /locus_tag="CMS_2016" /old_locus_tag="CMS2016" /db_xref="GeneID:6158753" CDS complement(2138164..2139003) /gene="hisG" /locus_tag="CMS_2016" /old_locus_tag="CMS2016" /EC_number="2.4.2.17" /note="long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="YP_001710709.1" /db_xref="GI:170782376" /db_xref="GeneID:6158753" /translation="MLRVAVPNKGSLAETAAQMLAEAGYAGRRDPKELYVLDARNDVE FFYLRPRDIATYVGSGALDVGITGRDLLIDSASDASETAELGFAGSTFRFAGPVGRFA DLEDLAGVRIATSYPVLVGGFLREHGVEAQLIRLDGAVESAIQLGVADAIADVVETGT TLRKAGLEIFGPVILRSTAVLISGAEEKPGAATLLRRLEGVLVARRYVLMDYDVPLDL LDAATAITPGIESPTISPLQDPAWVAVRSMVPRDDTNQIMDRLHEVGARAILVSPIHA ARI" misc_feature complement(2138398..2138862) /gene="hisG" /locus_tag="CMS_2016" /old_locus_tag="CMS2016" /inference="protein motif:HMMPfam:PF01634" /note="HMMPfam hit to PF01634, ATP phosphoribosyltransferase, score 1.2e-52" misc_feature complement(2138518..2138583) /gene="hisG" /locus_tag="CMS_2016" /old_locus_tag="CMS2016" /note="PS01316 ATP phosphoribosyltransferase signature." gene complement(2139050..2139313) /gene="hisE" /locus_tag="CMS_2017" /old_locus_tag="CMS2017" /db_xref="GeneID:6158754" CDS complement(2139050..2139313) /gene="hisE" /locus_tag="CMS_2017" /old_locus_tag="CMS2017" /EC_number="3.6.1.31" /note="catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosyl-ATP pyrophosphatase" /protein_id="YP_001710710.1" /db_xref="GI:170782377" /db_xref="GeneID:6158754" /translation="MKTFDDLFGELTRIAAERPEGSGTVRELDGGVHAIGKKVVEEAA EVWMAAEHESDDRAAEEISQLLYHVQVMMIARGLTLEDVGRHL" misc_feature complement(2139053..2139292) /gene="hisE" /locus_tag="CMS_2017" /old_locus_tag="CMS2017" /inference="protein motif:HMMPfam:PF01503" /note="HMMPfam hit to PF01503, Phosphoribosyl-ATP pyrophosphohydrolase, score 1.7e-07" gene complement(2139422..2139802) /locus_tag="CMS_2018" /old_locus_tag="CMS2018" /pseudo /db_xref="GeneID:6158752" misc_feature complement(2139434..2139598) /locus_tag="CMS_2018" /old_locus_tag="CMS2018" /inference="protein motif:HMMPfam:PF00254" /note="HMMPfam hit to PF00254, Peptidylprolyl isomerase,FKBP-type, score 0.0014" /pseudo misc_feature complement(2139494..2139580) /locus_tag="CMS_2018" /old_locus_tag="CMS2018" /note="PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2." /pseudo gene complement(2139825..2140493) /gene="rpe" /locus_tag="CMS_2020" /old_locus_tag="CMS2020" /db_xref="GeneID:6157696" CDS complement(2139825..2140493) /gene="rpe" /locus_tag="CMS_2020" /old_locus_tag="CMS2020" /EC_number="5.1.3.1" /note="catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate" /codon_start=1 /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="YP_001710711.1" /db_xref="GI:170782378" /db_xref="GeneID:6157696" /translation="MPVRIEPSILSADFANLEREIQRLATADLVHVDIMDNHFVPNLT FGLPMVQRLQQVTPVPLDIHLMIDDVDRWAPGYAEAGAASVTFHAEATREPVALARRL REIGARAGIALKPGTPVDDYLELLHEFDQVLVMTVEPGFGGQSFMPETMPKLRALRSR LRESGHDVWLQVDGGIDVETIGRAAEAGADTFVSGSGVFRGGDPEAAIAELRRAAEAH THAH" misc_feature complement(2139888..2140484) /gene="rpe" /locus_tag="CMS_2020" /old_locus_tag="CMS2020" /inference="protein motif:HMMPfam:PF00834" /note="HMMPfam hit to PF00834, Ribulose-phosphate 3-epimerase, score 1.9e-105" misc_feature complement(2140032..2140100) /gene="rpe" /locus_tag="CMS_2020" /old_locus_tag="CMS2020" /note="PS01086 Ribulose-phosphate 3-epimerase family signature 2." misc_feature complement(2140362..2140406) /gene="rpe" /locus_tag="CMS_2020" /old_locus_tag="CMS2020" /note="PS01085 Ribulose-phosphate 3-epimerase family signature 1." gene complement(2140504..2141970) /locus_tag="CMS_2021" /old_locus_tag="CMS2021" /db_xref="GeneID:6158943" CDS complement(2140504..2141970) /locus_tag="CMS_2021" /old_locus_tag="CMS2021" /codon_start=1 /transl_table=11 /product="putative Sun-family protein" /protein_id="YP_001710712.1" /db_xref="GI:170782379" /db_xref="GeneID:6158943" /translation="MSESTGSPGRRPAGADRRRPADRADVGGPSSVSPARRVAYEVVS AVRESDAYANLLLPVRIRRAALSAQDAALATELTYGTLRMSGYYDRVIELAAGRPVTA IDAPILDVLRLSVHQLLSMRVATHAAVNEGVDMARAVGSRSATGFVNGVLRTITRSEP DEWRQRVLDSAASDDERLALEHSHPLWVLRALRQALAREGRDDELEDLLRADNAAPAV SLVALPGLATVEETGEQPAAFSPLGAYLEGGDPMDAPGVADGRVRVQDEGSQLAALAL SRARAVTPGERWLDLCAGPGGKAALLAAEAGRSGALLTANELVPARAGLVRDALRAVP GDTEVWELDGTTVGEEHPGAFDRILLDAPCSGLGALRRRPEARWRKTPRDVAGLGALQ AGLIDSAIGALAPGGILAYVTCSPHLAETRAIVQAALQRHPDVSARDTRAVLQEVADG DLELPAADADASTHGSSVQLWPHRHGTDAMFIALLTRR" misc_feature complement(2140513..2141349) /locus_tag="CMS_2021" /old_locus_tag="CMS2021" /inference="protein motif:HMMPfam:PF01189" /note="HMMPfam hit to PF01189, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, score 3.3e-42" misc_feature complement(2140873..2140908) /locus_tag="CMS_2021" /old_locus_tag="CMS2021" /note="PS01153 NOL1/NOP2/sun family signature." misc_feature complement(2141494..2141874) /locus_tag="CMS_2021" /old_locus_tag="CMS2021" /inference="protein motif:HMMPfam:PF01029" /note="HMMPfam hit to PF01029, Antitermination protein NusB, score 1.5e-27" gene complement(2142038..2142955) /gene="fmt" /locus_tag="CMS_2022" /old_locus_tag="CMS2022" /db_xref="GeneID:6157697" CDS complement(2142038..2142955) /gene="fmt" /locus_tag="CMS_2022" /old_locus_tag="CMS2022" /EC_number="2.1.2.9" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /protein_id="YP_001710713.1" /db_xref="GI:170782380" /db_xref="GeneID:6157697" /translation="MRLVFAGTPLAAVPSLQRLAASGHEVALVVTRADAPLGRKRVLT PSPVAAEAERLGIPTLRVNRLDDDATARIAAVGAELGVIVAYGGLVREPLLSTPARGW INLHFSLLPRWRGAAPVQRSIMAGERVTGASVFQLERGMDTGPVFSMEERPTGDHETA GHVLDALAVQGADLLARTVDAIGAGTAVARPQEGEPTLAPKTTIDDGRVDWARSADEV LARIRGVTPEPGAHTSVDDVRLKIHRAAALRDAAPLEPGRIAALDGRVAIGTASHPVE LIQVQPAGKSPMPAADWWRGVTTKDVIAR" misc_feature complement(2142062..2142349) /gene="fmt" /locus_tag="CMS_2022" /old_locus_tag="CMS2022" /inference="protein motif:HMMPfam:PF02911" /note="HMMPfam hit to PF02911, Formyl transferase,C-terminal, score 4.8e-26" misc_feature complement(2142419..2142955) /gene="fmt" /locus_tag="CMS_2022" /old_locus_tag="CMS2022" /inference="protein motif:HMMPfam:PF00551" /note="HMMPfam hit to PF00551, Formyl transferase,N-terminal, score 5.3e-31" gene complement(2143071..2145107) /gene="priA" /locus_tag="CMS_2023" /old_locus_tag="CMS2023" /db_xref="GeneID:6158690" CDS complement(2143071..2145107) /gene="priA" /locus_tag="CMS_2023" /old_locus_tag="CMS2023" /note="binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity" /codon_start=1 /transl_table=11 /product="primosome assembly protein PriA" /protein_id="YP_001710714.1" /db_xref="GI:170782381" /db_xref="GeneID:6158690" /translation="MMVDSPLPQLDRLFDYAVPEPLRATCVPGVRVRVPLRSAGRVAD GYVIEVGDGRGYDGALSEVEQVVSPLPVLRPEIWTLAREVADRQAGTASDVIRLAVPP RQVRVEKAHLAAMAATPAEADADADAVAVAVAAPVAAAAAPLDPAPPAALPPAALPPI DGYAPDGLAAAVDGSGRVAVDAIPEVVELPGGVWAGRWAVTLAQAAARVLASGRSSVL VVPDYRDQDQLEAALAAHAPAGSVTRTDARQSGPDRYRSFLAGLGDEPRIVVGNRSAV YAPAPRLGLVAMWDEGDPLHAEPLSPYAHARDVALLRSRQQGTALVLLAHSRSTEVER LVAIGYLSSVAPEKNRTPRVIPTTSQTGDEGFARQARIPSGAWRAAKDAVEHGPVLIQ VARPGYAPLVACRACRQAARCTVCTGPLGMSTATSTPTCGWCGHLAGDWRCVNCGSDE LRLVTIGAGRTAEELGRAFPCVQVVLADGERHVQEVDAESRLVVATRGAEPVAAGGYR AILLLDGERMLARESLRVGEDVLRQWSNAAALAAPRAPVMLVGVGGQVARALATWQQP RYAREELLERRALRFPPAVRAASVEGLPDAVGQAVERLDGIEGVDVLGPVPTEQGRVR AIVRLDYASGPDAARELRAAVVRNASSRRKPVAGRTGFRPTVPLRVRFDDTGLF" gene complement(2145222..2146433) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /db_xref="GeneID:6158881" CDS complement(2145222..2146433) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /EC_number="2.5.1.6" /note="catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /protein_id="YP_001710715.1" /db_xref="GI:170782382" /db_xref="GeneID:6158881" /translation="MTDLRLFTSESVTEGHPDKICDQISDSILDALLTQDPSSRAAVE TLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSP DIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAER LAAVRHSGELSYLRPDGKTQVTIGYEGLVPRTVDTVVLSTQHGPQVSQEDLRREVEEH VIRPVLAAAAEIGIELDSRDATLLINPTGKFEIGGPKGDAGLTGRKIIVDTYGGFSRH GGGAFSGKDPSKVDRSAAYAMRWVAKNAVAAGLADRLEVQVAYAIGKAAPVGLYVEAF GTAHVPEDRIVRAIRETFDLRPAAIVERLDLLRPIYAETAAYGHFGRELPDFTWEALD RVADLQSAAGL" misc_feature complement(2145264..2145683) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /inference="protein motif:HMMPfam:PF02773" /note="HMMPfam hit to PF02773, S-adenosylmethionine synthetase, score 2.6e-79" misc_feature complement(2145579..2145605) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /note="PS00377 S-adenosylmethionine synthetase signature 2." misc_feature complement(2145687..2146061) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /inference="protein motif:HMMPfam:PF02772" /note="HMMPfam hit to PF02772, S-adenosylmethionine synthetase, score 7.4e-54" misc_feature complement(2146020..2146052) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /note="PS00376 S-adenosylmethionine synthetase signature 1." misc_feature complement(2146125..2146427) /gene="metK" /locus_tag="CMS_2024" /old_locus_tag="CMS2024" /inference="protein motif:HMMPfam:PF00438" /note="HMMPfam hit to PF00438, S-adenosylmethionine synthetase, score 1e-50" gene complement(2146473..2147690) /gene="coaBC" /locus_tag="CMS_2025" /old_locus_tag="CMS2025" /db_xref="GeneID:6158811" CDS complement(2146473..2147690) /gene="coaBC" /locus_tag="CMS_2025" /old_locus_tag="CMS2025" /EC_number="6.3.2.5" /note="catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine" /codon_start=1 /transl_table=11 /product="bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase" /protein_id="YP_001710716.1" /db_xref="GI:170782383" /db_xref="GeneID:6158811" /translation="MMVVVGITGGIAAYKAVGVVRGLVLLGHDVHVVPTEAALRFVGK PTLEAVSRNPVTSDLYDGVSEVRHVALGQKADLIVVAPATAHTLARMALGLSDDLLGT TILASRAPLVIAPAMHTEMWQHPATQANAALLRSRGATLVGPTSGRLTGTDSGPGRMA EVEDVIAAALAAVRPGGRDLEGRRIVVSAGGTREPLDPVRFLGNRSSGRQGVALAVAA RDRGADVVLVAAHLEVPAPAGIRVVPVSTALELSDAMVREAADADVVIMAAAVADYRP VSVSAGKIKKEEAGDALSVELVRNPDILQRLAADAAVPRADGTRRIVVGFAAETEQDP DELLRIGRQKLARKGCDLLVLNRVGWSEGFATEGNTITVLDRSGDTLAEAAGSKEQVA HRILDVVGAPASQ" misc_feature complement(2146563..2147153) /gene="coaBC" /locus_tag="CMS_2025" /old_locus_tag="CMS2025" /inference="protein motif:HMMPfam:PF04127" /note="HMMPfam hit to PF04127, DNA/pantothenate metabolism flavoprotein, C-terminal, score 5e-33" misc_feature complement(2147343..2147684) /gene="coaBC" /locus_tag="CMS_2025" /old_locus_tag="CMS2025" /inference="protein motif:HMMPfam:PF02441" /note="HMMPfam hit to PF02441, Flavoprotein, score 1.4e-37" gene complement(2147769..2148038) /gene="rpoZ" /locus_tag="CMS_2026" /old_locus_tag="CMS2026" /db_xref="GeneID:6158639" CDS complement(2147769..2148038) /gene="rpoZ" /locus_tag="CMS_2026" /old_locus_tag="CMS2026" /EC_number="2.7.7.6" /note="Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit omega" /protein_id="YP_001710717.1" /db_xref="GI:170782384" /db_xref="GeneID:6158639" /translation="MVDKTQGIIDPPIDELLSKVDSKYALVIFASKRARQINDYYADL HEGSLFDNVGPLVDSTIDDKPLSVAMHEINEDKLVATPIVEPAAS" misc_feature complement(2147787..2147984) /gene="rpoZ" /locus_tag="CMS_2026" /old_locus_tag="CMS2026" /inference="protein motif:HMMPfam:PF01192" /note="HMMPfam hit to PF01192, RNA polymerase Rpb6, score 6e-13" gene complement(2148087..2148917) /gene="gmk" /locus_tag="CMS_2027" /old_locus_tag="CMS2027" /db_xref="GeneID:6158963" CDS complement(2148087..2148917) /gene="gmk" /locus_tag="CMS_2027" /old_locus_tag="CMS2027" /EC_number="2.7.4.8" /note="N-terminal extension relative to homologues" /codon_start=1 /transl_table=11 /product="guanylate kinase" /protein_id="YP_001710718.1" /db_xref="GI:170782385" /db_xref="GeneID:6158963" /translation="MKHDIVTGERTPLGVLDASADPGHRAEATLRVTEFLTSIPNIGP TKLERILGDLGISTAKRLGGLGVHQRVRLTRFLEEWQAAKQIVEPSRLVVLAGPTAVG KGTVSTFIRENEPDVLLSVSATTRAPRPGEVEGVNYYFVSDAEFDRMVEHEELLEWAT VHNAHRYGTPRAPIDAALAEGRSVLLEIDIQGARQVKAAMPEARLVFLLPPTWEELVR RLVGRGTEGPEEQQRRLDTAKVELAAQDEFDHLVVNRDVAEAAREVVDLMRSRKAVGP" misc_feature complement(2148228..2148545) /gene="gmk" /locus_tag="CMS_2027" /old_locus_tag="CMS2027" /inference="protein motif:HMMPfam:PF00625" /note="HMMPfam hit to PF00625, Guanylate kinase, score 1.2e-33" misc_feature complement(2148495..2148548) /gene="gmk" /locus_tag="CMS_2027" /old_locus_tag="CMS2027" /note="PS00856 Guanylate kinase signature." gene complement(2148992..2149885) /gene="pyrF" /locus_tag="CMS_2028" /old_locus_tag="CMS2028" /db_xref="GeneID:6158731" CDS complement(2148992..2149885) /gene="pyrF" /locus_tag="CMS_2028" /old_locus_tag="CMS2028" /EC_number="4.1.1.23" /codon_start=1 /transl_table=11 /product="orotidine 5'-phosphate decarboxylase" /protein_id="YP_001710719.1" /db_xref="GI:170782386" /db_xref="GeneID:6158731" /translation="MTTADGGAVPDAPSFGARLARTFRVHGHLCVGIDPHRSLLDAWG LDDDARGLEEFGLRVVEATAGRAGIVKPQVAFFERHGSAGYAALERVLAAARDAGLLV IADAKRGDIGSTVDAYGAAWLAPDSALRADAVTLTAYTGVGSLDGVRAAADGWGAGVF VLAATSNPEARDLQRAVLPGDGSAAARTVARGIQDAAVAANGPLDDPSADPGSFGLVV GATVDAADAGLDLARLTRTPILAPGFGHQGALLGDVRSLFGPAAGVVIAAASRSILTA GPRRVAEAVTDHAGRLEEVLP" misc_feature complement(2149031..2149807) /gene="pyrF" /locus_tag="CMS_2028" /old_locus_tag="CMS2028" /inference="protein motif:HMMPfam:PF00215" /note="HMMPfam hit to PF00215, Orotidine 5'-phosphate decarboxylase, score 1.4e-34" misc_feature complement(2149541..2149582) /gene="pyrF" /locus_tag="CMS_2028" /old_locus_tag="CMS2028" /note="PS00156 Orotidine 5'-phosphate decarboxylase active site." gene complement(2149882..2153172) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /db_xref="GeneID:6158911" CDS complement(2149882..2153172) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /EC_number="6.3.5.5" /codon_start=1 /transl_table=11 /product="carbamoylphosphate synthetase large chain" /protein_id="YP_001710720.1" /db_xref="GI:170782387" /db_xref="GeneID:6158911" /translation="MPKRDDINSVLVIGSGPIVIGQAAEFDYSGTQACRVLREEGVRV ILVNSNPATIMTDPGFADATYIEPITSEVLEKIIIKERPDAVLPTLGGQTALNAAIRL DELGILAKHGVELIGAKVEAIQKGEDRQLFKDLVIESGADVARSHVAKTLEQAVEFAE DLGYPLVIRPSFTMGGLGSGFAHTRQELERMVADGLQSSPTTEVLLEESILGWKEYEL ELMRDTADNTVVVCSIENVDPVGVHTGDSITVAPALTLTDREYQHMRDIGIDIIRRVG VDTGGCNIQFAVDPTNGRLIVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYRLDE IPNDITKVTPASFEPTLDYVVVKVPRFAFEKFPAADAELTTTMKSVGEAMAIGRNYST ALQKALRSLEKRGSSFHWGAESRSVEELLETSRIPTDGRIVTVQQALRAGATPEQVFD ATKIDPWFIDQIVLINEVADAVRDADELDAPTLREAKDHGFSDAQIAEIRGIGEQEVR DARHAAGIRPVFKTVDTCAGEFPALTPYHYSSYDSETEIVPSDRRKVIILGSGPNRIG QGIEFDYSCVHASFALADAGFETIMINCNPETVSTDYDTSDRLYFEPLTLEDVLEIVH VEQQAGELVGVVVQLGGQTALGLAKGLEAAGVPILGTSPSAIDLAEERGLFSGILDAA GLVAPRNGTAVAIDEAVVVAEEIGYPVLVRPSYVLGGRGMEIVFDTATLHDYFLRMAD QGIIGEGKPLLIDRFLDDAIEIDIDAIYDGTELYVGGVMEHIEEAGIHSGDSSCTLPP VTLGRGQIQQVVDATRAIAEGVGVRGLLNVQFAIGAGVLYVLEANPRASRTVPFVSKA LGIPLAKAASLVMVGTSIAELKASGLLPERDGSDVPMDSPVAVKEAVLPFKRFRTKDG LIVDSVLGPEMRSTGEVMGIDRDFPRAFAKSQEAAFGGLPLSGTVFVSVADRDKRSIV LPVLRLQQLGFEVLATAGTAEILSRNGIQARVVRKYSEEPAAGDSPSIVDLINRDEVD VVINTPSGRTARADGYEIRAAAVAADKPLFTTIAQLTAAVASFDAIRAGFDVTSLQDY AIAREARR" misc_feature complement(2149990..2150265) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF02142" /note="HMMPfam hit to PF02142, Methylglyoxal synthase-like, score 3e-23" misc_feature complement(2150509..2151162) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF02786" /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain, ATP-binding, score 1.1e-13" misc_feature complement(2150635..2150658) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /note="PS00867 Carbamoyl-phosphate synthase subdomain signature 2." misc_feature complement(2151010..2151054) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /note="PS00866 Carbamoyl-phosphate synthase subdomain signature 1." misc_feature complement(2151166..2151522) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF00289" /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 1e-18" misc_feature complement(2151550..2151924) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF02787" /note="HMMPfam hit to PF02787, Carbamoyl-phosphate synthetase large chain, oligomerisation, score 1.7e-47" misc_feature complement(2152084..2152791) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF02786" /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain, ATP-binding, score 7.4e-112" misc_feature complement(2152261..2152284) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /note="PS00867 Carbamoyl-phosphate synthase subdomain signature 2." misc_feature complement(2152639..2152683) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /note="PS00866 Carbamoyl-phosphate synthase subdomain signature 1." misc_feature complement(2152795..2153157) /gene="carB" /locus_tag="CMS_2029" /old_locus_tag="CMS2029" /inference="protein motif:HMMPfam:PF00289" /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 2.8e-55" gene complement(2153172..2154350) /gene="carA" /locus_tag="CMS_2030" /old_locus_tag="CMS2030" /db_xref="GeneID:6158629" CDS complement(2153172..2154350) /gene="carA" /locus_tag="CMS_2030" /old_locus_tag="CMS2030" /EC_number="6.3.5.5" /note="catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthase small subunit" /protein_id="YP_001710721.1" /db_xref="GI:170782388" /db_xref="GeneID:6158629" /translation="MTDMARHEPAVLVLEDGRRYVGRAYGARGVSLGEAVFATGMTGY QETITDPSYAGQIVLQTAPHIGNTGMNDDDMESRRIWVAGYVVRDPSRVVSNFRGTRT LEDDLVAQGVVGISGIDTRAVTRRIRDEGAMRAGVFSGEAASLSDEEQLAQVRQAPDM AGRNLSAEVSTRETYTIPAVGERIGSVAVLDLGIKTATVKHLAARGLDVHVVPQSITT AELEELAPTAVFYSNGPGDPEASQYHVELLQDVLRKGIPFFGICFGNQLLGRALGFDT YKLPFGHRGINQPVLDRRTGRVEITSQNHGFAVSAPLDGPVDSPAGFGRAEVSHVSLN DQVVEGLNCLDIPAFSVQYHPEAAAGPHDSSYLFDRFVQLIHDASGTAPAAATPQETV" misc_feature complement(2153229..2153789) /gene="carA" /locus_tag="CMS_2030" /old_locus_tag="CMS2030" /inference="protein motif:HMMPfam:PF00117" /note="HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 7.8e-46" misc_feature complement(2153547..2153582) /gene="carA" /locus_tag="CMS_2030" /old_locus_tag="CMS2030" /note="PS00442 Glutamine amidotransferases class-I active site." misc_feature complement(2153877..2154326) /gene="carA" /locus_tag="CMS_2030" /old_locus_tag="CMS2030" /inference="protein motif:HMMPfam:PF00988" /note="HMMPfam hit to PF00988, Carbamoyl-phosphate synthase, small chain, score 2.3e-71" gene complement(2154347..2154874) /locus_tag="CMS_2031" /old_locus_tag="CMS2031" /db_xref="GeneID:6158628" CDS complement(2154347..2154874) /locus_tag="CMS_2031" /old_locus_tag="CMS2031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710722.1" /db_xref="GI:170782389" /db_xref="GeneID:6158628" /translation="MSGRLGPAVTVIALLVLLLALMVLGWRARRRRQRALPEPPSPPA GLGAPVLEVDVLYVATTTAGEPLDRLTVRPLGFRGRAAARVHDAGLVLAIDGEREVLV PADRITGSGLATYAIDRVVEEGGLVAVTWVLDETAGTSVDTYLRVIDPREKTALVDAL HQIPRLAHDDDNEGK" sig_peptide complement(2154347..2154421) /locus_tag="CMS_2031" /old_locus_tag="CMS2031" /note="Signal peptide predicted for CMS2031 by SignalP 2.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.296 between residues 25 and 26" misc_feature complement(2154797..2154865) /locus_tag="CMS_2031" /old_locus_tag="CMS2031" /note="1 probable transmembrane helix predicted for CMS2031 by TMHMM2.0 at aa 4-26" gene complement(2154871..2156262) /gene="pyrC" /locus_tag="CMS_2032" /old_locus_tag="CMS2032" /db_xref="GeneID:6157698" CDS complement(2154871..2156262) /gene="pyrC" /locus_tag="CMS_2032" /old_locus_tag="CMS2032" /EC_number="3.5.2.3" /note="catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="YP_001710723.1" /db_xref="GI:170782390" /db_xref="GeneID:6157698" /translation="MTQNDTHLIRGATLPSGERADILVADGLIREIGPDLDAPAGAHV VGADGLVALPGLVDLHVHLREPGYEQSETVLTGSRAAALGGFTAVFAMANTMPVQDTA GVVEQVKALGDAAGYATVRPIGAVSVGLAGESMAEIGAMASSRAAVRVFSDDGKCVSD PLLMRRALEYVKAFDGVIAQHAQDPRLTEGATMNEGALSGELGITGWPAVAEESIIAR DVLLAEHVGSRLHVCHVSTAGSVDVIRWAKARGVDVTAEVTPHHLLLTEDLVAGYDAR YKVNPPLRRREDVEALRTALADGTIDVVATDHAPHPTEAKDCEWDAAAFGMVGLESAL SVVQLAMVDTGLLDWAGVARVMSHAPARIGRLAEHGHALAGGSPADITLYDPSASRVF GRDDLGGLSGNSPYLEMTLPGRVVATFHRGYPTVLDGALVDRETVARAAVLRDRADAD ARDAAVATRGSGA" misc_feature complement(2155108..2156112) /gene="pyrC" /locus_tag="CMS_2032" /old_locus_tag="CMS2032" /inference="protein motif:HMMPfam:PF01979" /note="HMMPfam hit to PF01979, Amidohydrolase, score 4.5e-14" misc_feature complement(2155315..2155350) /gene="pyrC" /locus_tag="CMS_2032" /old_locus_tag="CMS2032" /note="PS00483 Dihydroorotase signature 2." misc_feature complement(2156065..2156091) /gene="pyrC" /locus_tag="CMS_2032" /old_locus_tag="CMS2032" /note="PS00482 Dihydroorotase signature 1." gene complement(2156259..2157215) /gene="pyrB" /locus_tag="CMS_2033" /old_locus_tag="CMS2033" /db_xref="GeneID:6158908" CDS complement(2156259..2157215) /gene="pyrB" /locus_tag="CMS_2033" /old_locus_tag="CMS2033" /EC_number="2.1.3.2" /note="catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis" /codon_start=1 /transl_table=11 /product="aspartate carbamoyltransferase catalytic subunit" /protein_id="YP_001710724.1" /db_xref="GI:170782391" /db_xref="GeneID:6158908" /translation="MRHLLSTRDLSRDEAVRILDVAEDMADVGTREIKKTPALRGRTV VNLFFEDSTRTRISFEAAAKRLSADVINFSAKGSSVSKGESLKDTAQTLQAMGADGVV VRHPSSGAPHTLAGSGWIDAGIVNAGDGTHEHPTQALLDAFTIRRRLHGSAARGKGLD GTRVVIVGDVLHSRVARSNAWLLTTLGAEVTLVAPPTLVPVGVGSWPVTVRYDLDAAL RDGAPDAVMMLRIQAERMRAAFFPNPREYARIWGLDDARLALLGPDTIVMHPGPMNRG LEISAAAADSERSTVREQVANGVSVRMAVLYLLLSGDGKADR" misc_feature complement(2156286..2156741) /gene="pyrB" /locus_tag="CMS_2033" /old_locus_tag="CMS2033" /inference="protein motif:HMMPfam:PF00185" /note="HMMPfam hit to PF00185, Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region, score 7.8e-12" misc_feature complement(2156769..2157212) /gene="pyrB" /locus_tag="CMS_2033" /old_locus_tag="CMS2033" /inference="protein motif:HMMPfam:PF02729" /note="HMMPfam hit to PF02729, Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain, score 8.8e-51" misc_feature complement(2157051..2157074) /gene="pyrB" /locus_tag="CMS_2033" /old_locus_tag="CMS2033" /note="PS00097 Aspartate and ornithine carbamoyltransferases signature." gene complement(2157212..2157796) /gene="pyrR" /locus_tag="CMS_2034" /old_locus_tag="CMS2034" /db_xref="GeneID:6158907" CDS complement(2157212..2157796) /gene="pyrR" /locus_tag="CMS_2034" /old_locus_tag="CMS2034" /EC_number="2.4.2.9" /note="regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity" /codon_start=1 /transl_table=11 /product="bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase" /protein_id="YP_001710725.1" /db_xref="GI:170782392" /db_xref="GeneID:6158907" /translation="MPQRTVLQPSDITRALTRIAHEILESNRGPHGLLLLGIPTRGTV LAERIGRIIARLEPEAPADLVGSLDVTMYRDDLQRNPTRAPSPTRLPAGGVDGRTVVL VDDVLFSGRTVRAALDAIGDLGRPTAVRLAALVDRGHRELPIRADFVGKNLPSSLSER IFVRLDETDGEDSVSIAGPDDEPATGSAAEGTTR" misc_feature complement(2157344..2157766) /gene="pyrR" /locus_tag="CMS_2034" /old_locus_tag="CMS2034" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 2.1e-10" gene complement(2157908..2159932) /gene="acsA" /locus_tag="CMS_2035" /old_locus_tag="CMS2035" /db_xref="GeneID:6158914" CDS complement(2157908..2159932) /gene="acsA" /locus_tag="CMS_2035" /old_locus_tag="CMS2035" /EC_number="6.2.1.1" /codon_start=1 /transl_table=11 /product="acetyl-coenzyme A synthetase" /protein_id="YP_001710726.1" /db_xref="GI:170782393" /db_xref="GeneID:6158914" /translation="MTSQRTEQAETAPAAEQDLFPPPAALAASANVTAEAYVRAEADP VAFWEEAARRLDWETPWHTAHTWIPPVAADGTPQVPAATWFAGGRLNVAANCVDRHVA AGRGEKVALHFEGEPGDRRTVTYRDLQEEVSRAANALTALGVGPGDRVVIYLPVLVET IVATLAVARIGAVHSLVFGGFSAEALRFRVEDTGAKLLITSDGQNRRGSAVATKPQAD EAVAGVASIEHVLVVRRTGQDVPWTAGRDVWWHDAVGSASPEHEPRAFDAEHPLFIIY TSGTTGRPKGLVHTSGGYLAHASWAHWAHFDARPDDVHWCTADLAWVTAHTYEIYGPL SNGLTQVIYEGTPDTPHRGRHLEVIERYGVTTYYTAPTLIRSLMGWYPDGVAGHDLSS IRLLGSVGEAINPAAWRWFHREIGGGSAPVVDTWWQSETGAAVIAPLPGVSTLKPGAA GRALPGFRVDVVDDDGEPTAPGEAGLLVIQRPWPGMARTVWGDPARYRSAYWERFADR GWFLAGDGARRDADGDIALQGRIDEVVNVSGHRLSTIEIESALVAHPRVGEAGVTGVA DDLTGQRVVAFVVPRGDDRPADDDAAGWAALAAELGPVLTAHVARAIGPVAKPRRIVA VPDVPKTRSGKIMRRLLADLVEGRTLGDATSLQDAAVLGRIRAVLDASAR" misc_feature complement(2158247..2159563) /gene="acsA" /locus_tag="CMS_2035" /old_locus_tag="CMS2035" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 1.2e-122" misc_feature complement(2159078..2159113) /gene="acsA" /locus_tag="CMS_2035" /old_locus_tag="CMS2035" /note="PS00455 Putative AMP-binding domain signature." gene complement(2160006..2160881) /locus_tag="CMS_2036" /old_locus_tag="CMS2036" /db_xref="GeneID:6158591" CDS complement(2160006..2160881) /locus_tag="CMS_2036" /old_locus_tag="CMS2036" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710727.1" /db_xref="GI:170782394" /db_xref="GeneID:6158591" /translation="MTAIRPGREDVRGSGTGVPDDDGTDVAGGASVARPASGRATGRS LLRVAMGLVVPAIVVGLWVVVTATGVVPPHLLPAPLDMVRAGVQLAEQGILGQYVAIS LQRVLLGFALGATVGLVLGAVVGLSRVGRLLLAPTAGAFRTVPSLAWVPLLLLWMGIN EDSKVTLVAIGALFPVYTTVAGALRHVDPHLVEAGRAFGLTRIPLLVTVQLPAVLPAV VSGLRLALAQSWLFLVAAELLAASMGLGYLLTESSANGRVDRVLLAIVLLAVLGAVTD AVVGLVERVLVRRWG" misc_feature complement(2160018..2160599) /locus_tag="CMS_2036" /old_locus_tag="CMS2036" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.6e-22" misc_feature complement(order(2160033..2160101,2160135..2160203, 2160216..2160284,2160321..2160389,2160402..2160470, 2160504..2160572,2160669..2160737)) /locus_tag="CMS_2036" /old_locus_tag="CMS2036" /note="7 probable transmembrane helices predicted for CMS2036 by TMHMM2.0 at aa 49-71, 104-126, 138-160,165-187, 200-222, 227-249 and 261-283" misc_feature complement(2160246..2160332) /locus_tag="CMS_2036" /old_locus_tag="CMS2036" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(2160878..2161930) /locus_tag="CMS_2037" /old_locus_tag="CMS2037" /db_xref="GeneID:6157699" CDS complement(2160878..2161930) /locus_tag="CMS_2037" /old_locus_tag="CMS2037" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001710728.1" /db_xref="GI:170782395" /db_xref="GeneID:6157699" /translation="MTRLLPRRSIPALALASAAAMLLAGCSAGEGSSVAPAAGASADP AGWSADALTLDWATYNPLSLIVKDQGLVEKRLGSDVKVDWVQSAGSNKANELLRAGAV DVGSTAGSAALLARANGSPIRTIDVYSQPEWTAIVVPKGSPITSVDQLRGADIAATKG TDPYFFLLQTLEQAGIPASDVTIQNLQHADGRAALENGSVDAWAGLDPLMAASEAEAG STLLYRNVDFATYGFLNATQSFLDASPDLAQAVVDSYEEARAWAVAHPDETAAILAQA AAIDPAVASTVIDRTNLGVDPVPGAAQRSVLERVGPILVASGDVPDQGKVDEALDELF EPRFAEAADPASGSAG" sig_peptide complement(2160938..2161003) /locus_tag="CMS_2037" /old_locus_tag="CMS2037" /note="Signal peptide predicted for CMS2037 by SignalP 2.0 HMM (Signal peptide probability 0.913) with cleavage site probability 0.820 between residues 22 and 23" gene complement(2162013..2162729) /locus_tag="CMS_2038" /old_locus_tag="CMS2038" /db_xref="GeneID:6157700" CDS complement(2162013..2162729) /locus_tag="CMS_2038" /old_locus_tag="CMS2038" /codon_start=1 /transl_table=11 /product="putative ATP-binding ABC transport protein" /protein_id="YP_001710729.1" /db_xref="GI:170782396" /db_xref="GeneID:6157700" /translation="MLRDVDLDLAAGDVVAVLGPSGCGKSTLLRQVSGLDRPDTGSIR IDGTPVRDVDQRSAVAFQEPRLLPWRTIRANVRLGLPRDVPRAEGDARVEDLLELTGL AEAADLRPRQVSGGMAQRASLARALARRPRVLVLDEPFGALDALTRLRMQDLLLDVHA AIPTTVLLVTHDVDEALHLADRVVLLGPDPAPGAAPGATVRRLLEVPGARPRDRGDAT LAALRAELLEGLGVPGHRAR" misc_feature complement(2162169..2162696) /locus_tag="CMS_2038" /old_locus_tag="CMS2038" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.2e-57" misc_feature complement(2162349..2162393) /locus_tag="CMS_2038" /old_locus_tag="CMS2038" /note="PS00211 ABC transporters family signature." misc_feature complement(2162652..2162675) /locus_tag="CMS_2038" /old_locus_tag="CMS2038" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2162978..2164606) /locus_tag="CMS_2039" /old_locus_tag="CMS2039" /db_xref="GeneID:6157701" CDS complement(2162978..2164606) /locus_tag="CMS_2039" /old_locus_tag="CMS2039" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001710730.1" /db_xref="GI:170782397" /db_xref="GeneID:6157701" /translation="MTSTVTRLTTLAAALAFATVGAVGIPAAHAATPTSSVRINEIES DGGDPGDWVELTDAGTATADLGGYVLTDDDPTHRYVIPGGTRVEPGRFLVIEEAANRS SGFDFGLGSADSVRLLAPDGTVIDEHSWTHHSPTTLGRIPDGTGSFGDTARATKGAPN AAPLPLATRPWPGSPALTPVDSTAAFTGSLSGLDIEPSGTAAPGVLWGVENDAGTLYR LLAQPDGSRRSDPSPAWRDGRTLRFPDGTGTVDAEGVTVAHDSSAGGVYVASERDEDR PTVSRPSVLRYDVSGPATTLAATDEWDLADDLPGLGANSGPEGVTWIPDAFLTAHRFV DARTGRAYRPSDYPGHGGGLFLVGVEGTASVYAYALMPGGTHALIATIPTPFAVVADV QFDRDLGAMWVACDDACAGRTALYTIDASGVFAREAAFEAPADADPALQDEGFAIDTV ATCVNGSRATYYADGADTDGHSLRRGSYRCASRAAPASRDPGARGAGGSPGLLAKTGG PAADAGMTALGALLVVLGAGAMCVARVLRRRVAV" misc_feature complement(2162999..2163067) /locus_tag="CMS_2039" /old_locus_tag="CMS2039" /note="1 probable transmembrane helix predicted for CMS2039 by TMHMM2.0 at aa 478-500" gene complement(2164683..2165096) /gene="nusB" /locus_tag="CMS_2040" /old_locus_tag="CMS2040" /db_xref="GeneID:6157702" CDS complement(2164683..2165096) /gene="nusB" /locus_tag="CMS_2040" /old_locus_tag="CMS2040" /codon_start=1 /transl_table=11 /product="transcription termination protein" /protein_id="YP_001710731.1" /db_xref="GI:170782398" /db_xref="GeneID:6157702" /translation="MSARTKARKRALDVLYVADIRGESIPATLAVEQQRAAAEPDRQA SWAYAREIAEGFVEHQDEIDELIETYSVNWTLARMPAVDRAILRIGIWEILFNADVPD GVAISESVDLASSLSTDESASFVNGMLARIAAAQA" misc_feature complement(2164689..2165084) /gene="nusB" /locus_tag="CMS_2040" /old_locus_tag="CMS2040" /inference="protein motif:HMMPfam:PF01029" /note="HMMPfam hit to PF01029, Antitermination protein NusB, score 2.5e-34" gene complement(2165100..2165663) /gene="efp" /locus_tag="CMS_2041" /old_locus_tag="CMS2041" /db_xref="GeneID:6158844" CDS complement(2165100..2165663) /gene="efp" /locus_tag="CMS_2041" /old_locus_tag="CMS2041" /note="Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA" /codon_start=1 /transl_table=11 /product="elongation factor P" /protein_id="YP_001710732.1" /db_xref="GI:170782399" /db_xref="GeneID:6158844" /translation="MASTADIKNGVVLNMDGQLWTVIEFQHVKPGKGGAFVRTKVKNV MSGKVVDRTFNAGAKIETETVDRRDFQYLYADGENFVFMDTSDYDQITLSAAQVGDAK NFMLENQDVTVALHNGEGLYVELPASVVLTITYTEPGLQGDRSTGGTKPATVETGHQI QVPLFLEQGTRVKVDTRTGDYLGRVTD" misc_feature complement(2165109..2165621) /gene="efp" /locus_tag="CMS_2041" /old_locus_tag="CMS2041" /inference="protein motif:HMMPfam:PF01132" /note="HMMPfam hit to PF01132, Elongation factor P (EF-P),score 2.1e-99" misc_feature complement(2165157..2165216) /gene="efp" /locus_tag="CMS_2041" /old_locus_tag="CMS2041" /note="PS01275 Elongation factor P signature." gene complement(2165775..2166215) /gene="aroQ" /locus_tag="CMS_2042" /old_locus_tag="CMS2042" /db_xref="GeneID:6158675" CDS complement(2165775..2166215) /gene="aroQ" /locus_tag="CMS_2042" /old_locus_tag="CMS2042" /EC_number="4.2.1.10" /note="catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="YP_001710733.1" /db_xref="GI:170782400" /db_xref="GeneID:6158675" /translation="MTRVLVLNGPNLGRLGSREPDVYGTGSLDDLRRELVAFAPDDVE IDLRQTDDEATLIGWLHEAVDARTPVIMNPAAFTHYSYALRDAAALVTKAGILLIEVH ISNPHAREEFRHQSVISPVATGVIAGLGQGSYLLALAHVVTGTR" misc_feature complement(2165781..2166206) /gene="aroQ" /locus_tag="CMS_2042" /old_locus_tag="CMS2042" /inference="protein motif:HMMPfam:PF01220" /note="HMMPfam hit to PF01220, Dehydroquinase, class II,score 3.1e-62" misc_feature complement(2166144..2166197) /gene="aroQ" /locus_tag="CMS_2042" /old_locus_tag="CMS2042" /note="PS01029 Dehydroquinase class II signature." gene complement(2166239..2167201) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /db_xref="GeneID:6158612" CDS complement(2166239..2167201) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710734.1" /db_xref="GI:170782401" /db_xref="GeneID:6158612" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2166251..2166793) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(2166878..2166943) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2166943..2167064) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2167064..2167129) /locus_tag="CMS_2043" /old_locus_tag="CMS2043" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2167299..2168456) /gene="thiL" /locus_tag="CMS_2044" /old_locus_tag="CMS2044" /db_xref="GeneID:6157703" CDS complement(2167299..2168456) /gene="thiL" /locus_tag="CMS_2044" /old_locus_tag="CMS2044" /EC_number="2.7.4.16" /codon_start=1 /transl_table=11 /product="putative thiamine monphosphate kinase" /protein_id="YP_001710735.1" /db_xref="GI:170782402" /db_xref="GeneID:6157703" /translation="MTTPGTPSDADPTDGGSGRSRVDAADVPTDGPADDDATLGSAGE LATLARILPHLPEADDAEVGPGDDCAVVRAPDGRFVITTDMMIEGPDFRLAWSTPHDL GRRAATSNLADVAAMGARPTALLVAIAAPAGTRVAELEALADGLREGCRLQAPGCGVV GGDLSVSDALVITVTATGDLEGRGPVLRSGARPGDVVAVAGTLGMAAAGVRLLFDEAR SPDADGVPVPDAALARTLRVSHPAAVEAQLAPVAPLTAGVDAARAGATAMLDVSDGLL LDLGRMARASGVGIDLGSAALADDARRVAAAHPSPPPAALDLVLTGGEDHALVAAFPA GAALPDPFRAIGVVAHAGPDGPAVTVDGAPYAGPQTALGGWDPYADWDGAR" gene 2168481..2168987 /locus_tag="CMS_2045" /old_locus_tag="CMS2045" /db_xref="GeneID:6159013" CDS 2168481..2168987 /locus_tag="CMS_2045" /old_locus_tag="CMS2045" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710736.1" /db_xref="GI:170782403" /db_xref="GeneID:6159013" /translation="MTPRRPARALRTAAAAAACGIALLLAGCSPTVSLEAAPGATDPL CADVVVHLPATLGTAPLRETDAQGTGAWGDPQSTVILRCGVATPGPTTDACISYDDVD WVEDDSRAPDIRYTTYGRTPAVEVVIDSTQASYTALTDLSGVVAVIPQTAKCVSAQDL GDAPPPGS" sig_peptide 2168481..2168588 /locus_tag="CMS_2045" /old_locus_tag="CMS2045" /note="Signal peptide predicted for CMS2045 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.841 between residues 36 and 37" misc_feature 2168514..2168582 /locus_tag="CMS_2045" /old_locus_tag="CMS2045" /note="1 probable transmembrane helix predicted for CMS2045 by TMHMM2.0 at aa 12-34" misc_feature 2168532..2168564 /locus_tag="CMS_2045" /old_locus_tag="CMS2045" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2168944..2169813) /locus_tag="CMS_2046" /old_locus_tag="CMS2046" /db_xref="GeneID:6157704" CDS complement(2168944..2169813) /locus_tag="CMS_2046" /old_locus_tag="CMS2046" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710737.1" /db_xref="GI:170782404" /db_xref="GeneID:6157704" /translation="MSGRGPSTARPTISVVIPVRDDAGHLRACLQALAGQTVAPDEVV VVDNASSDDSAEFARLAGARVVHEPVVGIPAAASAGYDAARHEVIARLDADCVPPADW IERLGDVLAARPDVAAVTGAARFLDGPRALRGIAAVSYLGAYFGSVTLALGHPPLFGS NFALRRDAWLEVRDEVHREGTHLHDDIDLSVHLGPEHRIVLDTHLRMQISMRPLTAPS TLPLRMSRGMASLTVHWPRELPWLRWWRTGRLALHERGARRAVAAGRTGSAEPAGLPV SSPEAARRRGPAR" misc_feature complement(2169295..2169774) /locus_tag="CMS_2046" /old_locus_tag="CMS2046" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 3.7e-25" gene complement(2169982..2171097) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /db_xref="GeneID:6157705" CDS complement(2169982..2171097) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /EC_number="6.3.2.4" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase" /protein_id="YP_001710738.1" /db_xref="GI:170782405" /db_xref="GeneID:6157705" /translation="MTMTARIRVVLLFGGTSSEHSISCATASGVLGAIDRERFEVIPV GITPRGAFTLQEDDASALALDAAALPEVVDDGSRVRWPEDAGSRELTVRDADGTERSL GPVDVVFPILHGTQGEDGTVQGMLELAGLPYVGSGVLASALGMDKHYAKTVLRAAGIE VAPWTTVSRQEWAADPAGVRERAAALGLPAFVKPARAGSSVGVSRVVATDGLDAALEV AFREDDRVLVESGLVGREVECAILDEGPGRAPSASVAGEIVVSGRDFYDFDAKYLGAD GIDLVCPADMTDAELAELRELSIRAFRAVDARGLARVDFFLTADGFVLNEINTMPGFT PISMFPACWEASGLAYPDLISRLLDVALAWEADAARA" misc_feature complement(2170021..2170662) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /inference="protein motif:HMMPfam:PF07478" /note="HMMPfam hit to PF07478, D-alanine--D-alanine ligase, C-terminal, score 6.2e-95" misc_feature complement(2170102..2170185) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /note="PS00844 D-alanine--D-alanine ligase signature 2." misc_feature complement(2170663..2171079) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /inference="protein motif:HMMPfam:PF01820" /note="HMMPfam hit to PF01820, D-alanine--D-alanine ligase, N-terminal, score 2.9e-49" misc_feature complement(2170726..2170761) /gene="ddl" /locus_tag="CMS_2047" /old_locus_tag="CMS2047" /note="PS00843 D-alanine--D-alanine ligase signature 1." gene complement(2171094..2172167) /gene="gpsA" /locus_tag="CMS_2048" /old_locus_tag="CMS2048" /db_xref="GeneID:6158656" CDS complement(2171094..2172167) /gene="gpsA" /locus_tag="CMS_2048" /old_locus_tag="CMS2048" /EC_number="1.1.1.94" /note="catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent glycerol-3-phosphate dehydrogenase" /protein_id="YP_001710739.1" /db_xref="GI:170782406" /db_xref="GeneID:6158656" /translation="MSDATASPTPAPAASTPDPDEGGERRRVVVLGAGSWGTTFAKVM ADGGSDVVMWARRPELAREITEAKRNSDYLPGINLPQRLSAHPSLERVLAGATDVFVS VPSQTLRANLEAARDLIPQDAVVVSLMKGVEKGTGLRMSEVIQEVLGIGPERIAVASG PNLALEIAREQPTAVVVSSAEQATAERVAKIARSAYFRSFVNTDVIGTEFGGVLKNLI AVAVGIVDGVGYGENTKASIITRGLAEMTAFSVAYGARAETLAGLAGLGDLIATCESS LSRNNTAGRLLGQGYSFTDVVKSMQQTAEGLSSVAPVLELARQRGVLMPIVEQVSQVL AGTLSPRDIAPHLTTDDDTPQGE" misc_feature complement(2171127..2171561) /gene="gpsA" /locus_tag="CMS_2048" /old_locus_tag="CMS2048" /inference="protein motif:HMMPfam:PF07479" /note="HMMPfam hit to PF07479, NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal, score 2.1e-62" misc_feature complement(2171562..2172095) /gene="gpsA" /locus_tag="CMS_2048" /old_locus_tag="CMS2048" /inference="protein motif:HMMPfam:PF01210" /note="HMMPfam hit to PF01210, NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal, score 7.1e-67" gene complement(2172160..2173008) /locus_tag="CMS_2049" /old_locus_tag="CMS2049" /db_xref="GeneID:6158735" CDS complement(2172160..2173008) /locus_tag="CMS_2049" /old_locus_tag="CMS2049" /codon_start=1 /transl_table=11 /product="putative acyltransferase" /protein_id="YP_001710740.1" /db_xref="GI:170782407" /db_xref="GeneID:6158735" /translation="MPAPPAPAGRVHDGRIRPSAGLIPAATDDDRDPTGGSMANEKAR PSIFWVLAALVLPVLNAAVRFEIRNPERLPRTGSYVLAPNHYSEIDPVVMGAVAWKLG RLPRFLAKASLFDVPVVGWFLRRSGQIPVQRDGGVRGGQAIEAASDLARDGRIVVVYP EGTLTRDPDLWPMRGKTGAVRLALQAGIPVIPAAHWGTQQLMGRYSKRVRLFPRTTVH VVIGEPVDLDRFRDRSLDSATLTEATAVVMAAITQLVEELRGETAPTERWDPRSKNQK ETGRFE" misc_feature complement(2172421..2172819) /locus_tag="CMS_2049" /old_locus_tag="CMS2049" /inference="protein motif:HMMPfam:PF01553" /note="HMMPfam hit to PF01553, Phospholipid/glycerol acyltransferase, score 4.3e-37" gene complement(2173020..2174390) /locus_tag="CMS_2050" /old_locus_tag="CMS2050" /db_xref="GeneID:6157706" CDS complement(2173020..2174390) /locus_tag="CMS_2050" /old_locus_tag="CMS2050" /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="YP_001710741.1" /db_xref="GI:170782408" /db_xref="GeneID:6157706" /translation="MNSLVSDAKNAGERVGLMSDSIVINGGIPLRGRIEVRGAKNLAT KAMVASLLGESPSLLRSVPDISDVRVVSGLLEVHGVTLRKGEKEGDLILDPKDVESAH MADIDAHAGSSRIPILFCGPLLHRLGEAFIPDLGGCRIGDRPIDFHLDALRAFGAVVE KLPSGIRLTAPNGLKGANVELPYPSVGATEQVLLTGVRAQGITELKNAAIEPEIMDLI AILQKMGAIISVEPNRVILIEGVDRLEGYTHRALFDRNEAASWASAALATGGDIFVGG VRQAEMMTFLNVFRKVGGAFDIEEDGIRFYHPGGDLKPVVIETDVHPGFMTDWQQPLV VALTQAPGVSIIHETVYENRFGFTDALNEMGADIVVHKEGLEGHERRVARRDFEQAAV ITGPTHLHGADITVPDLRGGFSHLIAALTAEGRSTVSNVGIISRGYEDFIGKLRQLGA DFSYEG" misc_feature complement(2173056..2174315) /locus_tag="CMS_2050" /old_locus_tag="CMS2050" /inference="protein motif:HMMPfam:PF00275" /note="HMMPfam hit to PF00275, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase), score 1.4e-65" gene complement(2174391..2175005) /gene="leuD" /locus_tag="CMS_2051" /old_locus_tag="CMS2051" /db_xref="GeneID:6157707" CDS complement(2174391..2175005) /gene="leuD" /locus_tag="CMS_2051" /old_locus_tag="CMS2051" /EC_number="4.2.1.33" /note="catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase small subunit" /protein_id="YP_001710742.1" /db_xref="GI:170782409" /db_xref="GeneID:6157707" /translation="MEPISRVTGTAVPLKQSNVDTDQIIPAQFLKRVTKTGFEDALFF QWRQDPDFFINQPVYEGATVLVAGPDFGTGSSREHAVWALRDYGFRAVLSPRFGDIFR GNSGKQGLLTGIVTEDDVERLWAAMDAEPGLDLTVDLVERVATAPGLAVPFEIDEYTR WRLLEGLDDIALTLRDEDAITTFEHGRAAWRPRTLPARPAALEN" misc_feature complement(2174652..2175005) /gene="leuD" /locus_tag="CMS_2051" /old_locus_tag="CMS2051" /inference="protein motif:HMMPfam:PF00694" /note="HMMPfam hit to PF00694, Aconitate hydratase,C-terminal, score 2.4e-36" gene complement(2175008..2176489) /gene="leuC" /locus_tag="CMS_2052" /old_locus_tag="CMS2052" /db_xref="GeneID:6158787" CDS complement(2175008..2176489) /gene="leuC" /locus_tag="CMS_2052" /old_locus_tag="CMS2052" /EC_number="4.2.1.33" /note="dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase large subunit" /protein_id="YP_001710743.1" /db_xref="GI:170782410" /db_xref="GeneID:6158787" /translation="MRRAVQPAKTLAEKVWADHLVAEGEDGTPDLLYIDLHLVHEVTS PQAFDGLRLAGRPVRRPDLTIATEDHNTPTIGIDRPIADLTSRTQIHTLRRNAEEFGI RLHSLGDIEQGIVHVVGPQLGLTMPGITVVCGDSHTSTHGAFGAMAFGIGTSEVEHVM ATQTLPLQPFKTMAVTVEGTLRPGVTAKDIILAVIAQIGTGGGQGYVLEYRGSAIRSL SMEGRMTICNMSIEAGARAGMVAPDQTTYDYLRGRPHAPTGADWDEAVAYWDTLATDD DAVFDAEVFLDADTLEPFVTWGTNPGQGVSLSEPVPDPAAVADPNERAAAERALAYMD LAPGTPMKEIAVDTVFIGSCTNSRVEDLRAAAEIVRGRTKAEGVRVMVVPGSARVRLE AEAEGIDKVFTDFGAEWRFAGCSMCLGMNPDQLAPGERCASTSNRNFEGRQGKGGRTH LVSPLVAAATAIRGTLSSPWDLQEDGVVDAASIRQAAAVGQGI" misc_feature complement(2175098..2176462) /gene="leuC" /locus_tag="CMS_2052" /old_locus_tag="CMS2052" /inference="protein motif:HMMPfam:PF00330" /note="HMMPfam hit to PF00330, Aconitate hydratase,N-terminal, score 2.3e-233" misc_feature complement(2175233..2175274) /gene="leuC" /locus_tag="CMS_2052" /old_locus_tag="CMS2052" /note="PS01244 Aconitase family signature 2." misc_feature complement(2175404..2175454) /gene="leuC" /locus_tag="CMS_2052" /old_locus_tag="CMS2052" /note="PS00450 Aconitase family signature 1." gene complement(2176555..2177376) /locus_tag="CMS_2053" /old_locus_tag="CMS2053" /db_xref="GeneID:6158786" CDS complement(2176555..2177376) /locus_tag="CMS_2053" /old_locus_tag="CMS2053" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710744.1" /db_xref="GI:170782411" /db_xref="GeneID:6158786" /translation="MTEARAIALGGRRIDVTWAARTDVGSVRAVNEDGLLADPPVWLV ADGMGGHAFGDRASATLVETFGGLSGDAPVTRDLIVEAVDASNDAIGDLITGDDPPGT VAGTTLAGVALVRSDAGDPLWMVFNVGDSRVYAWTDGRLEQVTIDHSAVQELVDQGRM TRAEAERSPVRNLITRAVGSHDEVAADEWLLPVVDHQAFLICSDGLTKELDDQAISGV LQLAHADGGGVDRAADALVAQALASGGRDNVTVVVIEARAHDEPLDDGTAGAPTT" misc_feature complement(2176630..2177373) /locus_tag="CMS_2053" /old_locus_tag="CMS2053" /inference="protein motif:HMMPfam:PF00481" /note="HMMPfam hit to PF00481, Protein phosphatase 2C-like, score 0.0011" gene complement(2177373..2178413) /locus_tag="CMS_2054" /old_locus_tag="CMS2054" /db_xref="GeneID:6157708" CDS complement(2177373..2178413) /locus_tag="CMS_2054" /old_locus_tag="CMS2054" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_001710745.1" /db_xref="GI:170782412" /db_xref="GeneID:6157708" /translation="MPLDLPLPFEIVSLTVLLLVLVADLLIVYRRPHVPSTKESALWV AFYVGLALVFAVIMLFVAGGEHAGQFLAGWLTEYSLSIDNLFVFVIIMSRFSVPRKYQ QEVLMVGIIIALVLRGIFILLGAELIESYSWIFYIFGAFLLYTAVKQAVGDEDEESED SLFIRFLRRRLKIAPDFDGAKVRTVIDGRKVLTPMVIVFVSIGTTDLIFALDSIPAIF GITESPFIVFTANIFALMGLRQLYFLLGGLLDRLVYLKYGIAFILFFIGVKLVLHAMH ENTLPFVNGGEGIEWAPEIPTLVSLVVILASMVVATVASLIKMRVDGIPVTGADAEPA PVERGDDDRDAR" misc_feature complement(order(2177463..2177531,2177589..2177657, 2177676..2177744,2177787..2177843,2177973..2178026, 2178039..2178101,2178138..2178206,2178222..2178290, 2178327..2178386)) /locus_tag="CMS_2054" /old_locus_tag="CMS2054" /note="9 probable transmembrane helices predicted for CMS2054 by TMHMM2.0 at aa 10-29, 42-64, 70-92, 105-125,130-147, 191-209, 224-246, 253-275 and 295-317" misc_feature complement(2177469..2178209) /locus_tag="CMS_2054" /old_locus_tag="CMS2054" /inference="protein motif:HMMPfam:PF03741" /note="HMMPfam hit to PF03741, Integral membrane protein TerC, score 2.2e-72" gene 2178543..2179238 /locus_tag="CMS_2055" /old_locus_tag="CMS2055" /db_xref="GeneID:6157709" CDS 2178543..2179238 /locus_tag="CMS_2055" /old_locus_tag="CMS2055" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710746.1" /db_xref="GI:170782413" /db_xref="GeneID:6157709" /translation="MTREGRPMSVLANELDAPDHGGEDTGPRRRGPRTSGDARASIIE AARMLFIESGADRVSARRIAAAAGVDPSLVRYYFGSLEALLEEALRPSEDLIAPYLRL RVLPIEERGAALVSAALHTWEHPVGSTIMRWVTVSSDHDSAAYRRFAEAAPQHWMSAL PEETSAEEAGIRNSLVGAALGGIAITRYIWRMEPIASMSHETVVALHGPVVQEFLTGP LPAVPAVAAAPAA" misc_feature 2178666..2178806 /locus_tag="CMS_2055" /old_locus_tag="CMS2055" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 9.1e-14" misc_feature 2178714..2178779 /locus_tag="CMS_2055" /old_locus_tag="CMS2055" /note="Predicted helix-turn-helix motif with score 1214.000, SD 3.32 at aa 58-79, sequence VSARRIAAAAGVDPSLVRYYFG" gene complement(2179267..2180064) /locus_tag="CMS_2056" /old_locus_tag="CMS2056" /db_xref="GeneID:6157710" CDS complement(2179267..2180064) /locus_tag="CMS_2056" /old_locus_tag="CMS2056" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710747.1" /db_xref="GI:170782414" /db_xref="GeneID:6157710" /translation="MSTAKRVVVTGASSGIGAATVRLFRSRGWDVVAVARREDRLRAL AEETGATYAVADLTVQADVDALRDHLRETGHVHALVNNAGGAVGTDSVEGGSPEDWAW IYEINVLAVQRVTAALLPLLRASVPEGGSADIVTVSSIAAHVPYEGGGGYNAAKAAVH AMLGVLRLELAGEPIRVIEIAPGQVRTEEFSLVRFGGDRAKADAVYDGVPGPLTAEDV ASAIVHAVELPPHVNVDLLTLKPVAQAAPHKLVRRPLAVREELTDRT" sig_peptide complement(2179267..2179320) /locus_tag="CMS_2056" /old_locus_tag="CMS2056" /note="Signal peptide predicted for CMS2056 by SignalP 2.0 HMM (Signal peptide probability 0.819) with cleavage site probability 0.500 between residues 18 and 19" misc_feature complement(2179336..2180046) /locus_tag="CMS_2056" /old_locus_tag="CMS2056" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 2.7e-46" misc_feature complement(2179564..2179650) /locus_tag="CMS_2056" /old_locus_tag="CMS2056" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 2180151..2181569 /locus_tag="CMS_2057" /old_locus_tag="CMS2057" /db_xref="GeneID:6157711" CDS 2180151..2181569 /locus_tag="CMS_2057" /old_locus_tag="CMS2057" /note="catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine aminocarboxypropyltransferase" /protein_id="YP_001710748.1" /db_xref="GI:170782415" /db_xref="GeneID:6157711" /translation="MVRPHGRHRRTREGTTMSDHDEDRAAGWRFETQQIHAGAAPDPV THARATPIYQTTSYVFDDSQHAQDLFALAQPGNIYGRMMNPTQAVVEERIAALEGGTA ALLVASGQSASTFAVLNIAQAGDHIVSSSSIYGGTYNLFKYTLAKLGIETTFVEDQDD PAAWARAVRPDTKLFFAETIGNPRINILDIRAVADQAHAAGVPLIVDNTIATPYLIRP FEHGADVVVHSATKFLGGHGTVIGGLVVDGGRFPWSEHGERFPGLTTPDPSYHGVTYA EAVGDGVAYITKARVQLLRDLGASIAPASAWQLIQGIETLSLRIERHVQNAQAVAEWL DAHDDLADVYYAGLPTSPSYAAANRYAPLGVGAVLSFELKGGVDAGRALVDSLQLFSH LANIGDVRSLVIHPASTTHAQLTPEQQLTAGVTPGLVRLSVGLESIDDIIDDLAAGLP AARAVKDGAAPAALAGTRPSGA" misc_feature 2180241..2181500 /locus_tag="CMS_2057" /old_locus_tag="CMS2057" /inference="protein motif:HMMPfam:PF01053" /note="HMMPfam hit to PF01053, Cys/Met metabolism pyridoxal-phosphate-dependent enzymes, score 1.2e-210" misc_feature 2180820..2180864 /locus_tag="CMS_2057" /old_locus_tag="CMS2057" /note="PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site." gene 2181611..2182822 /gene="metX" /locus_tag="CMS_2058" /old_locus_tag="CMS2058" /db_xref="GeneID:6157712" CDS 2181611..2182822 /gene="metX" /locus_tag="CMS_2058" /old_locus_tag="CMS2058" /EC_number="2.3.1.31" /note="Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine" /codon_start=1 /transl_table=11 /product="homoserine O-acetyltransferase" /protein_id="YP_001710749.1" /db_xref="GI:170782416" /db_xref="GeneID:6157712" /translation="MDWQTPEDTVPSSLVTDAQIRSLIGRPPASGAWREGDPVADRLF ASVGGIDLEAGGRIPSVRVAYETFGERDPDGGNAVLVLHALTGDSHLRGPAGPGQPTG GWWSGIVGPGLAIDTDRWFVVAPNMLGGCQGTTGPASLASDGAEWADRFPYITIRDQV AVQAALADALGIDVWAAVVGGSMGGMQALEWGVGFPDRMRRLAILAAPAIASADQIAL NSVQAEAIRMDPAYRDGDYFDAADGDGPHRGLALARRMALLNYRSPHELNQRFSRSWQ SGISPMGDEGRYAVESYLDFHGNKFTRRFDATSYIRLIDAMSSHDVGRDRGGVEAALA RVRAATLVVGIDSDRLFPVPDQRLIAQAVPGSVDGGQVVVISSDYGHDGFLIENQAVG RELARLLDTRA" misc_feature 2181968..2182801 /gene="metX" /locus_tag="CMS_2058" /old_locus_tag="CMS2058" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 7.2e-16" gene 2182940..2183620 /locus_tag="CMS_2059" /old_locus_tag="CMS2059" /db_xref="GeneID:6158812" CDS 2182940..2183620 /locus_tag="CMS_2059" /old_locus_tag="CMS2059" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001710750.1" /db_xref="GI:170782417" /db_xref="GeneID:6158812" /translation="MSRRPLHATGQGQRVRVALVDDHVLLLDGLSARLSRPRTGVEVV ATSPTWSGLVRDDRFPDAFDVVVLDLALRDEVPVAQKIRTLAGAGLTSVLLSTHADPS TIHGAMRAGASAVVPKAESSEELIASIHAAADGTPRQSALVQQAMQDFHAEEDPRLGQ QEQRALVLYAGGRSVRDVAEAMSTTEETVKSYIKRGRRKYLHAGTDLGTKLLLRRHAI RHGWIAPE" misc_feature 2182982..2183350 /locus_tag="CMS_2059" /old_locus_tag="CMS2059" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 9.5e-07" misc_feature 2183456..2183521 /locus_tag="CMS_2059" /old_locus_tag="CMS2059" /note="Predicted helix-turn-helix motif with score 1576.000, SD 4.55 at aa 195-216, sequence RSVRDVAEAMSTTEETVKSYIK" gene 2183679..2184950 /locus_tag="CMS_2060" /old_locus_tag="CMS2060" /db_xref="GeneID:6157713" CDS 2183679..2184950 /locus_tag="CMS_2060" /old_locus_tag="CMS2060" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001710751.1" /db_xref="GI:170782418" /db_xref="GeneID:6157713" /translation="MDNRPRPSRGRASGVTDAPRIGGTPSARHRRRRTPSEDPMDRMK RERERLLQRTARVYGLSFSAVAAACILLAGEIPVPAAAGSLALLAVLAVAQWRIGTDA SVRWMVVVLVAGLAAMVVAQLGGRSASSLTALTHISVGGIGSLALLGTVRSGRLRIVA AAFVLTSAVAVVASWATAAFPYVVLVHVFGWMLAGILGYWLSVAVHRVGRRITDIGRA HRAERMASELEAQRRQGARLLHDTVLATLTLLAHSGVGVTPQAMRQQAADDARLLRQL RLGANPTPQASGGYTLEPVEQSVLGNTLESVKQRFGRMGLEVSWHGTGQVLLPSDILD AFLLSLAECLENVRRHAGVTEAHVTITDDDTTVRAMVTDAGVGFDLAHVDQAKLGFKE SVVARLTDVGGNARLFSSPGSGTTVVLEVPK" misc_feature order(2183838..2183906,2183916..2183975,2183994..2184053, 2184066..2184125,2184144..2184212,2184225..2184293) /locus_tag="CMS_2060" /old_locus_tag="CMS2060" /note="6 probable transmembrane helices predicted for CMS2060 by TMHMM2.0 at aa 54-76, 80-99, 106-125, 130-149,156-178 and 183-205" misc_feature 2184669..2184947 /locus_tag="CMS_2060" /old_locus_tag="CMS2060" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 0.0054" gene 2184947..2186149 /locus_tag="CMS_2061" /old_locus_tag="CMS2061" /db_xref="GeneID:6157714" CDS 2184947..2186149 /locus_tag="CMS_2061" /old_locus_tag="CMS2061" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710752.1" /db_xref="GI:170782419" /db_xref="GeneID:6157714" /translation="MSGRADSAPSRASRRIRLPEGTSTQPTSIGLGYLGAGSAVVCAI AIGYGLVRFALDYRIMPSPRLTATAWILLVALIAVVVVAIRALRDRMPGPLMAVFVVG LGIVVALDLVAVWPLGDVMQHATAGIAAGAAREVLAVDAALGIVLLLVFLFSDPVRPG DIAPELSAISRAVVPAAFGVTVVRGFRRLTEMELDRVLVQSTVSAPRYAVGMMASEEL ARLDLAAEQLLDDVANAREPLPLSPLAASTAASLATELRLHLIEGRRETWLHHAITES EFLGPDVTLSDPNALAGLLDRRQRDGLLSAVWLLLTSTERRSGVPEVSVQLALGPLRG RPPGAQPVPLRRAVVPIVVTTTGLPRTRLDPSTWDAIDKVGTHTESTRGSSLLITIDC VVDNPADR" misc_feature order(2185031..2185099,2185136..2185204,2185232..2185300, 2185337..2185405,2185448..2185504) /locus_tag="CMS_2061" /old_locus_tag="CMS2061" /note="5 probable transmembrane helices predicted for CMS2061 by TMHMM2.0 at aa 29-51, 64-86, 96-118, 131-153 and 168-186" gene 2186261..2187223 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /db_xref="GeneID:6157715" CDS 2186261..2187223 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710753.1" /db_xref="GI:170782420" /db_xref="GeneID:6157715" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 2186333..2186398 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 2186398..2186519 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 2186519..2186584 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 2186669..2187211 /locus_tag="CMS_2062" /old_locus_tag="CMS2062" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 2187287..2187907 /locus_tag="CMS_2063" /old_locus_tag="CMS2063" /db_xref="GeneID:6157716" CDS 2187287..2187907 /locus_tag="CMS_2063" /old_locus_tag="CMS2063" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001710754.1" /db_xref="GI:170782421" /db_xref="GeneID:6157716" /translation="MDDHRMLLGALTEWIRNAASDIEMVAAVSTWPDLLTHPRFPVDV VLLDLDLKDNLPISLKIATLKTTGVKTVLMSTYSEPNVVREALASGALGYLVKSEDAS MIVDAIRLAADGQSYISAELDLAINSTDVGGVPKLSAQERRVMALYGGGEPVKSVAYS LGISEETAKSYLKRIREKYRVAGFDVGTKVALRKRAIQDGILLQGE" misc_feature 2187287..2187634 /locus_tag="CMS_2063" /old_locus_tag="CMS2063" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 1.5e-06" misc_feature 2187686..2187859 /locus_tag="CMS_2063" /old_locus_tag="CMS2063" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 6.4e-06" misc_feature 2187740..2187805 /locus_tag="CMS_2063" /old_locus_tag="CMS2063" /note="Predicted helix-turn-helix motif with score 1171.000, SD 3.18 at aa 152-173, sequence EPVKSVAYSLGISEETAKSYLK" gene complement(2187924..2189204) /locus_tag="CMS_2064" /old_locus_tag="CMS2064" /db_xref="GeneID:6157717" CDS complement(2187924..2189204) /locus_tag="CMS_2064" /old_locus_tag="CMS2064" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710755.1" /db_xref="GI:170782422" /db_xref="GeneID:6157717" /translation="MNPPSSGQATLSPARVRIALLALAMGGFAIGTTEFVAMGLLPQL ASDLLPEVAARSTEAANAQAGTLISAYALGVVVGAPTIAAASARAPRRKLLLWLLLAF TLGTVLSAILPSFGLVVLARFVAGLPHGAYFGIASLVAAQLMGEGKRARGVAFVLAGL TIANVIGVPIVTWIGQNAGWRVAYLVVAAIFAATFVAVLLAVPAQAGNPEATLRRELR AFTRLQVWLALLIGAIGFGGFFAVYTFVSPMVTEVTGLPEWSVPLALVVVGLGMTVGN LAGGWWADRDVKAALLSLFGLLILSLVGLVLTASNPVGLFVSLFLIGGSAAALSPGIQ IRLMDVAHDSQSIAAALNHSALNTGNAVGAALGGVTVAAGLGYTSPALVGVGLSVAGL LIALAAFGLDRHQRGSRRLTDGQRLTTQPIGIGG" misc_feature complement(order(2188002..2188061,2188071..2188139, 2188200..2188268,2188281..2188340,2188359..2188427, 2188470..2188538,2188599..2188667,2188680..2188748, 2188785..2188853,2188866..2188925,2188944..2189012)) /locus_tag="CMS_2064" /old_locus_tag="CMS2064" /note="11 probable transmembrane helices predicted for CMS2064 by TMHMM2.0 at aa 41-63, 70-89, 94-116, 129-151,156-178, 199-221, 236-258, 265-284, 289-311, 332-354 and 358-377" misc_feature complement(2188089..2189132) /locus_tag="CMS_2064" /old_locus_tag="CMS2064" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(2189243..2189560) /locus_tag="CMS_2065" /old_locus_tag="CMS2065" /db_xref="GeneID:6157718" CDS complement(2189243..2189560) /locus_tag="CMS_2065" /old_locus_tag="CMS2065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710756.1" /db_xref="GI:170782423" /db_xref="GeneID:6157718" /translation="MLVAFSVAPSGGDAPDASVHDAVAAAVAVVRASGLPNRTDAMFT TIEGDWDEVFDVVRRATEAVAPFGTRVALVLKADIRPGYAGELTGKLERLEKALDARG ASD" misc_feature complement(2189276..2189560) /locus_tag="CMS_2065" /old_locus_tag="CMS2065" /inference="protein motif:HMMPfam:PF01910" /note="HMMPfam hit to PF01910, Protein of unknown function DUF77, score 1.4e-22" gene 2189766..2190446 /locus_tag="CMS_2066" /old_locus_tag="CMS2066" /db_xref="GeneID:6157719" CDS 2189766..2190446 /locus_tag="CMS_2066" /old_locus_tag="CMS2066" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001710757.1" /db_xref="GI:170782424" /db_xref="GeneID:6157719" /translation="MDKKTKIIIGVAGGVVVLVGAFAAFGDPIYKQLAGTPDAAPTLA STPAAGGALGDLSGDWTVGGSSYAGYRVDEVLNGTPVTVNGRTDAVTGDITVAGSQVT KGTMTVDVTKIATDQPPRDAYFQNVAMATGDFPTATFTLTQPIAADGVEAGVPATYDV TGDLTLHGVTKSVTAQMQASFTSDGGQIVGSIPITFQDFGVQAPSLGFVTVEDHGSVE FSLDVAKA" sig_peptide 2189766..2189843 /locus_tag="CMS_2066" /old_locus_tag="CMS2066" /note="Signal peptide predicted for CMS2066 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.325 between residues 26 and 27" misc_feature 2189784..2189843 /locus_tag="CMS_2066" /old_locus_tag="CMS2066" /note="1 probable transmembrane helix predicted for CMS2066 by TMHMM2.0 at aa 7-26" gene complement(2190443..2191375) /locus_tag="CMS_2067" /old_locus_tag="CMS2067" /db_xref="GeneID:6157720" CDS complement(2190443..2191375) /locus_tag="CMS_2067" /old_locus_tag="CMS2067" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710758.1" /db_xref="GI:170782425" /db_xref="GeneID:6157720" /translation="MVPRPGAVAAFPRAYREGMSDAHHDHAPDGWIRQDAERTRRAIR LPRDDDDKYTRGVLGVRTGSDRYPGAAVLGVEAAARTGVGMIRYLGPAGASASVLARR PEVVTADGRVQAWLVGSGMDQAHRDDAAADAIVAALRQGLPSVVDAGALDLVGRATGP VIVTPHFRELSRLLDGAGIRASAEEIAADAPGWAERAARELGVCVMLKGATTFVVGGS ARIAVRAGTPWLATAGSGDVLGGALGALVAGASARVADAPDPLAALAEVAAAAAWLHG RAGDLASGGGPITALDVAEAMPRAVRETLAGSGG" misc_feature complement(2190479..2191204) /locus_tag="CMS_2067" /old_locus_tag="CMS2067" /inference="protein motif:HMMPfam:PF01256" /note="HMMPfam hit to PF01256, Protein of unknown function UPF0031, score 6.2e-30" gene 2191457..2192536 /locus_tag="CMS_2068" /old_locus_tag="CMS2068" /db_xref="GeneID:6157721" CDS 2191457..2192536 /locus_tag="CMS_2068" /old_locus_tag="CMS2068" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710759.1" /db_xref="GI:170782426" /db_xref="GeneID:6157721" /translation="MTTSPLFEPITVRGVTARNRIWVAPMCQYSIDARNGVPGAWHLA HLGSFARGGAGLVMAEATGVSPEARITPEDTGIWDDAQRDAWKPIVDFIHEMGAVAAI QLAHAGRKASTYSFSGRGTMPAEEGGWETVAPSAEPFPGYGTPVALDAAGIRKVVDDF AAAARRSVDAGFDVLELHAAHGYLLHQFLSPLSNHRDDEFGGSLENRARLLLQVIDAV RAEVPDAPLLVRFSATDWAGDAGWDEQQTATVAAWAAEHGADFFDISTGGNTTGVTIP VAPGYQVPFAEYVKEHAKVALNAVGLITEPAQAEAVVAEGRADAVMLGREMLRDPHFA LRAAHELGVEIDYWPKQYDRARWAA" misc_feature 2191469..2192488 /locus_tag="CMS_2068" /old_locus_tag="CMS2068" /inference="protein motif:HMMPfam:PF00724" /note="HMMPfam hit to PF00724, NADH:flavin oxidoreductase/NADH oxidase, score 4.3e-84" gene complement(2192603..2193646) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /db_xref="GeneID:6157722" CDS complement(2192603..2193646) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710760.1" /db_xref="GI:170782427" /db_xref="GeneID:6157722" /translation="MGEYAGGIIALVVLLAVNAFFVGAEFAVISAKRSQIEPRAEEGS RAARITLFAMEHATLMLATTQLGITVCSLLILNVSEPAIHHLLEIPLGATGLPEEAIS TIAFVIALLIVSFLHVVLGEMVPKNISFSVPDRAALLLAPPLVGIARVVKPLIVALNA ISNAVLRIAKVEPKDEAASAFTLDEVQGIVDQSTREGLLEDRTGALTAAFEFTGKKVQ DIAIPLDALVSLPETASPSEVERAVARHGFSRYVIVDEAGEPTGYLHLKDVIDLDEAG EFVRPVPTKRIRQLVSVFEGTELEDALAMMRRSGAHLARAFTEAGETTGVLFLEDIIE ELVGEVQDATRRA" misc_feature complement(2192636..2192797) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 0.018" misc_feature complement(2192825..2192986) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 8.7e-09" misc_feature complement(2193038..2193610) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /inference="protein motif:HMMPfam:PF01595" /note="HMMPfam hit to PF01595, Protein of unknown function DUF21, score 1.4e-57" misc_feature complement(order(2193284..2193352,2193410..2193478)) /locus_tag="CMS_2069" /old_locus_tag="CMS2069" /note="2 probable transmembrane helices predicted for CMS2069 by TMHMM2.0 at aa 45-67 and 87-109" gene complement(2193639..2195069) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /db_xref="GeneID:6157723" CDS complement(2193639..2195069) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710761.1" /db_xref="GI:170782428" /db_xref="GeneID:6157723" /translation="MHEWLLLAVGLVLTLGTGLFVASEFALVNLDRSDLEKRQERGEK RLGPPIRALRITSTHLSSAQLGITLTTLLAGYTMEPTLSLLLAGPLTSAGLAEGLVSP VATVVALVVATLLSMIIGELVPKNFALALPRETAKLVIPFQTLFTTVFKPAVLLLNNS ANGILRLVGIEPKEELSGARSAEELSSLVRRSALAGLLEDDTAMLLSRTLRFADLTAS DVMTPRLRVKSVERTDSAQTVIELAMTTGYSRFPVTDDGVDDVIGLVHVKQAVAVPRE KRAQVPVTALQSEAIRVPETMKLDDLLGELRGRGFQMAVVVDEYGGTAGVATLEDLVE ELVGELADEHDRTRAGVVRSRDSLTFPGMLRPDELLERTGLRIPDEGPYETAAGFVMS ELGRLPVVGDELELETGTLRVERLDGRRIDRIRFTPVPVPVATAVGTTRAERQADRQA EREAGREAGRQADAERAAMRKEPSRG" sig_peptide complement(2193639..2193716) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /note="Signal peptide predicted for CMS2070 by SignalP 2.0 HMM (Signal peptide probability 0.932) with cleavage site probability 0.482 between residues 26 and 27" misc_feature complement(2193780..2194019) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /inference="protein motif:HMMPfam:PF03471" /note="HMMPfam hit to PF03471, Transporter-associated region, score 8.1e-18" misc_feature complement(2194059..2194220) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 8.7e-08" misc_feature complement(2194245..2194409) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /inference="protein motif:HMMPfam:PF00571" /note="HMMPfam hit to PF00571, CBS, score 2.7e-07" misc_feature complement(2194464..2195057) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /inference="protein motif:HMMPfam:PF01595" /note="HMMPfam hit to PF01595, Protein of unknown function DUF21, score 3e-56" misc_feature complement(order(2194710..2194778,2194812..2194880, 2194989..2195057)) /locus_tag="CMS_2070" /old_locus_tag="CMS2070" /note="3 probable transmembrane helices predicted for CMS2070 by TMHMM2.0 at aa 5-27, 64-86 and 98-120" gene complement(2195190..2196685) /locus_tag="CMS_2071" /old_locus_tag="CMS2071" /pseudo /db_xref="GeneID:6157724" misc_feature complement(2195210..2196601) /locus_tag="CMS_2071" /old_locus_tag="CMS2071" /inference="protein motif:HMMPfam:PF00478" /note="HMMPfam hit to PF00478, IMP dehydrogenase/GMP reductase, score 1.8e-117" /pseudo gene 2196821..2200627 /gene="kgd" /locus_tag="CMS_2072" /old_locus_tag="CMS2072" /db_xref="GeneID:6157725" CDS 2196821..2200627 /gene="kgd" /locus_tag="CMS_2072" /old_locus_tag="CMS2072" /note="kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth" /codon_start=1 /transl_table=11 /product="alpha-ketoglutarate decarboxylase" /protein_id="YP_001710762.1" /db_xref="GI:170782429" /db_xref="GeneID:6157725" /translation="MTGTGTDDGSTGDFGANEWLVDEMYERFVVDKDSVDRSWWPILE NYHTTVIEGREATPATGDQTAEAQIPDTESTSAPATTNTGSPAPTPAPASAGQPDAQA QQPATGSQPAARTTSIAPKQQPIPAQAPAKAPAKKGQEPTPPGEDEVSPLRGMAKSLA TNMDASLTIPTATSVRTIPAKLMIDNRIVINNHLKRARGGKVSFTHLIGWALIQALKE FPSQNVHYDEVDGKPSVVSPAHINLGIAIDMPKPDGTRALLVPSIKGAEAMTFGEFLS AYEDLVKKARGNKLAAGDFAGTTISLTNPGGIGTVHSVPRLMKGQGAIIGAGALEYPA EFQGSSPKTLVELGIGKTITLTSTYDHRVIQGAGSGEFLKIVHERLIGQHGFYEDIFA ALRIPYDPIQWATDINVDLSERVSKTSRVQELINAYRVRGHLMADIDPLEYQQRTHPD LEITNHGLTFWDLDREFVTDGFGGRRQALLRDVLGILRDSYCRTIGIEYMHIQQPDER RWIQGKVEQPYAKPTHDEQMRILSKLNESEAFETFLQTKYVGQKRFSLEGGESTISLL DTLLQGAADHGLDEVAIGMAHRGRLNVLTNIAGKSYGQIFREFEGTQDPRTVQGSGDV KYHLGTEGTFRGVHGEEMPVYLAANPSHLEAVNGVLEGIVRAKQDRKPIGSFSVLPIL VHGDASMAGQGVVFETLQLSQLRAYRTGGTVHIVINNQVGFTTPPSESRSSVYSTDVA KSIQAPIFHVNGDDPEAVARVAHLAFEFRQEFKKDVVIDLVCYRRRGHNEGDDPSMTQ PLMYNLIEAKRSVRKLYTEALVGRGDITQEEYDAAQKDFQDRLERAFAETHAAQTSSI PIQTDDAGAVSDLERPDSQQDDGHGEPETTGVSEAVIHSIGDAHDNPPQGFSVHPKLQ ALMRKRLEMSRSGSIDWAFGELLAIGSLLLENTPVRLAGQDSRRGTFVQRHAVLHDRD NGQEWLPLANLSDRQARFWIYDTLLSEYAAMGFEYGYSVERPDALVLWEAQFGDFANG AQTIIDEFISSAEQKWGQRSSVVLLLPHGYEGQGPDHSSARIERFLQLCAEQNMTVAR PSTPASYFHLLRRQAYSRPRRPLVVFTPKAMLRLRGATSDVEAFTSGRFEPVIDDVRI EDRGAVRRVLLHSGKVHYDLLGELEKRQDRSIALVRLEQFYPFPEEQVRRVVESYPDA EVVWVQDEPENQGAWPFVHVEFGRVLPDRAVRVVSRPAAASPAAGSSKRHATEQTDLI ARATAE" misc_feature 2197250..2198005 /gene="kgd" /locus_tag="CMS_2072" /old_locus_tag="CMS2072" /inference="protein motif:HMMPfam:PF00198" /note="HMMPfam hit to PF00198, Catalytic domain of components of various dehydrogenase complexes, score 2e-58" misc_feature 2198414..2199391 /gene="kgd" /locus_tag="CMS_2072" /old_locus_tag="CMS2072" /inference="protein motif:HMMPfam:PF00676" /note="HMMPfam hit to PF00676, Dehydrogenase, E1 component, score 1.1e-43" misc_feature 2199605..2200189 /gene="kgd" /locus_tag="CMS_2072" /old_locus_tag="CMS2072" /inference="protein motif:HMMPfam:PF02779" /note="HMMPfam hit to PF02779, Transketolase, central region, score 2.7e-61" gene complement(2200729..2201169) /locus_tag="CMS_2073" /old_locus_tag="CMS2073" /db_xref="GeneID:6157726" CDS complement(2200729..2201169) /locus_tag="CMS_2073" /old_locus_tag="CMS2073" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710763.1" /db_xref="GI:170782430" /db_xref="GeneID:6157726" /translation="MTNAIQSLGTPSPSDLTVIVELLRLLDYEVDEERVAARLSRMTA AAGHETWVVRDDAGDIAGLAGGHLMWGLADDEPIAQLIILVVREGRQAGGIGSDLIRH YEAWAREHGATRFLATSAAARDNVTRFYARRGYHASGIRYSKLG" misc_feature complement(2200762..2201016) /locus_tag="CMS_2073" /old_locus_tag="CMS2073" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.3e-11" gene complement(2201204..2201446) /locus_tag="CMS_2074" /old_locus_tag="CMS2074" /db_xref="GeneID:6157727" CDS complement(2201204..2201446) /locus_tag="CMS_2074" /old_locus_tag="CMS2074" /codon_start=1 /transl_table=11 /product="putative anti sigma factor" /protein_id="YP_001710764.1" /db_xref="GI:170782431" /db_xref="GeneID:6157727" /translation="MSDCGCDKAKKDLEEYLHHELDKADAADIREHMANCADCAREHR VGVVLRDTVRRACTEAAPEDLRTQVMEKLRAIQATH" gene complement(2201443..2202099) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /db_xref="GeneID:6157728" CDS complement(2201443..2202099) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /codon_start=1 /transl_table=11 /product="putative ECF RNA polymerase sigma factor" /protein_id="YP_001710765.1" /db_xref="GI:170782432" /db_xref="GeneID:6157728" /translation="MASTEEAADQQEAEAAVVEEPRPAQPGDNRELFEEQALPFIDQL YAAGLRMTRNPADAQDLVQETFVKAYTAFHQFKQGTNLKAWLYRILTNTFINNYRKKQ RDPYNGTIDELEDWQLGGATSATATTTRSAEAEAIDHLPDSTVKDALQSIPEDFRMAV YFADVEGFSYQEIADIMKTPVGTVMSRLHRGRRMLRSLLSDYARERGISTAHLTGATK" misc_feature complement(2201509..2201658) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 6.3e-14" misc_feature complement(2201533..2201598) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /note="Predicted helix-turn-helix motif with score 1199.000, SD 3.27 at aa 168-189, sequence FSYQEIADIMKTPVGTVMSRLH" misc_feature complement(2201788..2201994) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 4.5e-18" misc_feature complement(2201833..2201928) /gene="sigR" /locus_tag="CMS_2075" /old_locus_tag="CMS2075" /note="PS01063 Sigma-70 factors ECF subfamily signature." gene 2202335..2203798 /gene="aroA" /locus_tag="CMS_2076" /old_locus_tag="CMS2076" /db_xref="GeneID:6158989" CDS 2202335..2203798 /gene="aroA" /locus_tag="CMS_2076" /old_locus_tag="CMS2076" /EC_number="2.5.1.19" /note="catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /protein_id="YP_001710766.1" /db_xref="GI:170782433" /db_xref="GeneID:6158989" /translation="MEIFRYSGPTFSPYDDDRTHAPVPTDDGPWAAPVADGPLDATVP LPGSKSLTNRELVLSALADSPSTLRSPLRSRDTRLMIEALRALGTVIEEVDGGSAFGP DLRITPAELAGGITIECGLAGTVMRFLPPVAALALGPVSFDGDPSARRRPMSGTIEAL RALGVDVNDDGRRALPFSLYGTGEVPGGEIAIDASASSQFVSGLLLAAPRFAQGLRLR HTGETLPSMPHIEMTIRTLAERGVVVESPEPGVWIVPPSPIAGREVRIEPDLSNAAPF LCAALVAGGRVAIPGWPEETTQVGADLAHLLPRFGATVTREGGALVVDGGPGLAAGGR ITGVDLDLSTGGELAPALVALAALADGPSRITGIGHLRGHETDRLAALAAEITGLGGS VTELEDGLAISPAPLHGGPWRAYEDHRMATAGAIVGLAVPGVEIDDIGTTAKTLPEFP ELWLGPLLGRAPRAAVDPLALGGITGPGAPGGLGGLL" misc_feature 2202437..2203693 /gene="aroA" /locus_tag="CMS_2076" /old_locus_tag="CMS2076" /inference="protein motif:HMMPfam:PF00275" /note="HMMPfam hit to PF00275, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase), score 1.8e-107" gene 2203795..2204859 /locus_tag="CMS_2077" /old_locus_tag="CMS2077" /db_xref="GeneID:6158609" CDS 2203795..2204859 /locus_tag="CMS_2077" /old_locus_tag="CMS2077" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001710767.1" /db_xref="GI:170782434" /db_xref="GeneID:6158609" /translation="MSWLADPEEDDGVWDAYDESSVRVRPNPKGNKPRSKQRPGHTDS VEGRVLTVDRGRFGVLVGEDTPDEHTLIATRARELGKKAVVTNDRVDIVGDTSGDEGS LSRIVRIAPRRTLLRRSADDSDAVERVIVANADQMLIVVAAAEPEPRARLVDRYLVAA FDAGIQPILCITKSDVADPATFAAHFRVLDVPVVLSRSDDVPLDELRALLADRTTVAV GHSGVGKSTLVNALVPDAKRATGVVNQVTGRGRHTSSSTVSMRVETGDGGHGWIIDTP GVRSFGLGHVDPANILRSFASYAHLPEGEPPGGIPLTEAHDWEIVDRVEAGELGDAGR ERLHSLQHLVANRSDAGKAE" misc_feature 2203930..2204829 /locus_tag="CMS_2077" /old_locus_tag="CMS2077" /inference="protein motif:HMMPfam:PF03193" /note="HMMPfam hit to PF03193, Protein of unknown function DUF258, score 1.5e-61" misc_feature 2204449..2204472 /locus_tag="CMS_2077" /old_locus_tag="CMS2077" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2204896..2205708 /locus_tag="CMS_2078" /old_locus_tag="CMS2078" /db_xref="GeneID:6157729" CDS 2204896..2205708 /locus_tag="CMS_2078" /old_locus_tag="CMS2078" /codon_start=1 /transl_table=11 /product="putative monophosphatase" /protein_id="YP_001710768.1" /db_xref="GI:170782435" /db_xref="GeneID:6157729" /translation="MASEPLHSLSSDLRLARELADMADAISLDRFRSADLAIETKADS SWVTDADTSVERAIRAGIADSRPHDSVLGEEYGTSGSSSRQWIIDPIDGTSNYARGVP VWGTLIALAVDGVPVVGVVSAPALGRRWWGATGLGAYVDDTLGQATTSQERRIRVSDV DRLEDASMSVAGVQRWRDADRLDELLDLSGRVKRSRDFGDLWAYMLLAEGLIDIAGEH DLKPYDMAALIPVIEEAGGRFTSIDGDAGPWHGSALATNGRLHDAVLAVVAR" misc_feature 2204917..2205702 /locus_tag="CMS_2078" /old_locus_tag="CMS2078" /inference="protein motif:HMMPfam:PF00459" /note="HMMPfam hit to PF00459, Inositol monophosphatase,score 1.3e-60" misc_feature 2205151..2205192 /locus_tag="CMS_2078" /old_locus_tag="CMS2078" /note="PS00629 Inositol monophosphatase family signature 1." gene complement(2205740..2207251) /locus_tag="CMS_2079" /old_locus_tag="CMS2079" /pseudo /db_xref="GeneID:6157730" misc_feature complement(2205902..2207155) /locus_tag="CMS_2079" /old_locus_tag="CMS2079" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" /pseudo gene 2207470..2208552 /locus_tag="CMS_2080" /old_locus_tag="CMS2080" /db_xref="GeneID:6157731" CDS 2207470..2208552 /locus_tag="CMS_2080" /old_locus_tag="CMS2080" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001710769.1" /db_xref="GI:170782436" /db_xref="GeneID:6157731" /translation="MQNRARRLTVSLAAVVAAGLALSGCGSSADSGTADPAVSPATGD TLIVYTNSNGDGRGDWVTAEAAKAGFDIQIVGLGGADLANRIVAEKNNPVGDVVFGLN NMYFENLKAEDAITAYTPAWSGEVDQAAGDPEDGTYWPLVEQAIVTVHDSKQTSGGDV PKDVTDLYSSKYKGKYEVNTRLGEATPQLILAGLLAPYEDPDGDLGISDAGWEVVKDY FANGSPAVEGTDLYARLSRGEVAFGTLASSGIAARDAQYGTTTEVVPAKAGVPFVTEQ IAEIAGTRKEERARAFIDWFGSADVQGAFAEEFSSYPVNTTARETALPAVKELIESLD KQDVDYGFVREHIADWVEKTELEYLP" sig_peptide 2207470..2207556 /locus_tag="CMS_2080" /old_locus_tag="CMS2080" /note="Signal peptide predicted for CMS2080 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.594 between residues 29 and 30" misc_feature 2207512..2207544 /locus_tag="CMS_2080" /old_locus_tag="CMS2080" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2208576..2209580 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /db_xref="GeneID:6157732" CDS 2208576..2209580 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /codon_start=1 /transl_table=11 /product="putative ABC-transporter ATP-binding protein" /protein_id="YP_001710770.1" /db_xref="GI:170782437" /db_xref="GeneID:6157732" /translation="MRFGDQVAIPGLDLEIHEGEFFTLLGPSGCGKTTALRTLAGFVD PSRGEIVIDGQVATRLPSEKRRVGMVFQNYALFPSMSVRQNIAFGLTVRKAGKAETDR LVRAMADQVELSAAQLDKNVAELSGGQQQRVAIARALVLEPRILLLDEPLSNLDAKLR VQLREQLKGLQSRLGITTVYVTHDQEEALTMSDRIAVFDAGRIEQVGTPEDIYDRSAT EFVATFVGAINALGPATVARLRDAGATDLDASGRAYVRLERVSVDPRGAAPADARRAR IDGVVAERTYHGSSSTYRVDLGDDAVTALVTETGTPPLAPGTEVVVGIDPAAILQYRS" misc_feature 2208630..2209178 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.7e-67" misc_feature 2208651..2208674 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2208948..2208992 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /note="PS00211 ABC transporters family signature." misc_feature 2209386..2209568 /locus_tag="CMS_2081" /old_locus_tag="CMS2081" /inference="protein motif:HMMPfam:PF03459" /note="HMMPfam hit to PF03459, TOBE, score 1.1e-10" gene 2209583..2211394 /locus_tag="CMS_2082" /old_locus_tag="CMS2082" /pseudo /db_xref="GeneID:6157733" misc_feature 2210663..2211292 /locus_tag="CMS_2082" /old_locus_tag="CMS2082" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 5.2e-06" /pseudo gene complement(2212013..2212489) /gene="smpB" /locus_tag="CMS_2083" /old_locus_tag="CMS2083" /db_xref="GeneID:6157734" CDS complement(2212013..2212489) /gene="smpB" /locus_tag="CMS_2083" /old_locus_tag="CMS2083" /note="binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="YP_001710771.1" /db_xref="GI:170782438" /db_xref="GeneID:6157734" /translation="MPRERGEKVVATNRKARHDYTIESTYEAGLVLTGTEVKSLRQGR ASLVDGYAFVDAGEAWLDAVHIPEYNQGTWNNHPVRRKRKLLLHKEQILKIHSKVKEG GYTVVPLQLYFVDGRAKVELAIAKGKKEYDKRQTLRERQDKREADRAMSSHRRLGE" misc_feature complement(2212265..2212468) /gene="smpB" /locus_tag="CMS_2083" /old_locus_tag="CMS2083" /inference="protein motif:HMMPfam:PF01668" /note="HMMPfam hit to PF01668, SmpB protein, score 2.7e-37" misc_feature complement(2212370..2212408) /gene="smpB" /locus_tag="CMS_2083" /old_locus_tag="CMS2083" /note="PS01317 Protein smpB signature." gene complement(2212556..2213473) /gene="ftsX" /locus_tag="CMS_2084" /old_locus_tag="CMS2084" /db_xref="GeneID:6158993" CDS complement(2212556..2213473) /gene="ftsX" /locus_tag="CMS_2084" /old_locus_tag="CMS2084" /codon_start=1 /transl_table=11 /product="putative cell division protein" /protein_id="YP_001710772.1" /db_xref="GI:170782439" /db_xref="GeneID:6158993" /translation="MRLGLVLSEVGNGLRRNVSMVVSVVLVTFISLTFVGAAVLLQMQ IGQMKNYWYDRAQVAIDFCTDTSVPSETCVNGKATQEQIDAVKQQLDSDTLAPFIDKY YFEDQDTAYKNFQEQFKGDPVTELVQPEFLNEAFWVNLKDPSKSDILSDSLSGLAGVE SVTDQRQYLDQIFSILNAASLTAVGIAGLMLVAAALLIATTIRLSAFSRRRELGIMRL VGASNRFIQTPFILEGVFAALIGSVLASAATVALVKFFVQGFLSTRLTSISLVNMDDA LLVVPILLSVGVVLAAVSANFAISRYLRI" sig_peptide complement(2212613..2212666) /gene="ftsX" /locus_tag="CMS_2084" /old_locus_tag="CMS2084" /note="Signal peptide predicted for CMS2084 by SignalP 2.0 HMM (Signal peptide probability 0.753) with cleavage site probability 0.535 between residues 18 and 19" misc_feature complement(2212565..2213077) /gene="ftsX" /locus_tag="CMS_2084" /old_locus_tag="CMS2084" /inference="protein motif:HMMPfam:PF02687" /note="HMMPfam hit to PF02687, Protein of unknown function DUF214, score 6e-25" misc_feature complement(order(2212577..2212645,2212703..2212771, 2212853..2212921,2213336..2213404)) /gene="ftsX" /locus_tag="CMS_2084" /old_locus_tag="CMS2084" /note="4 probable transmembrane helices predicted for CMS2084 by TMHMM2.0 at aa 5-27, 166-188, 216-238 and 258-280" gene complement(2213470..2215086) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /db_xref="GeneID:6158700" CDS complement(2213470..2215086) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /codon_start=1 /transl_table=11 /product="putative cell division-associated ATP-binding ABC transport protein" /protein_id="YP_001710773.1" /db_xref="GI:170782440" /db_xref="GeneID:6158700" /translation="MYPGNPRPALSSVDLEILRGEFVFLVGASGSGKSSFLRLVLKED RPTQGTIHVLGQQLNQLSSRKVPYYRRSLGVVFQDFRLLPNKSVFDNVAFTLQVIGKS RGFIQEAVPDVLNMVGLQGKEQRLPHELSGGEQQRVAIARAVVNKPAVLLADEPTGNL DPLTSAGIMQVLERINANGTTVIMATHDSGIVDQMQKRVIELIGGEVVRDELGGQYQT SAIDLPRTAENPVGVNPEHPPVAAPTPVFVPAAPLPAPARPTASAEPATGAERREQAK LDKQRRADEKARAKEEATREAAAAKAAKKAPRKPSPAATAPAAVPAPVVPAAAPSTTP APPAAPAVPIVPATATDRDAAAARAAQPARDAEPARGPRADAPVYAPSAFAEAARVDP VPEHEAERDRPAPAAEERREPAPSRSEQRVPEQVTAEPVEPTPSRAVPVTRDDAPPVD DAPPTPPSRRNGGGAAPAAPSTGSIRRLPEGTGVIRLPDLSGGEGGSAPADGRDDAEL AELGLAEKLGLRARGESPDDTGAQDVGPTR" misc_feature complement(2214472..2215029) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.8e-60" misc_feature complement(2214655..2214699) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /note="PS00211 ABC transporters family signature." misc_feature complement(2214784..2215086) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /note="PS00430 TonB-dependent receptor proteins signature 1." misc_feature complement(2214985..2215008) /gene="ftsE" /locus_tag="CMS_2085" /old_locus_tag="CMS2085" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2215189..2216292) /gene="prfB" /locus_tag="CMS_2086" /old_locus_tag="CMS2086" /db_xref="GeneID:6158696" CDS complement(2215189..2216292) /gene="prfB" /locus_tag="CMS_2086" /old_locus_tag="CMS2086" /codon_start=1 /transl_table=11 /product="chain release factor 2" /protein_id="YP_001710774.1" /db_xref="GI:170782441" /db_xref="GeneID:6158696" /translation="MIDQDFSSRITELRDTYSNIRSVIGVERLQQEVEELSAQAGEPD LWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEMAKDDEESAEEAVVELAG ITKIMDELEVQTLLNGEFDPRPAVVTIRAGAGGVDAADFAEMLMRMYLRWAEQHDYSA TVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRMSPFNSAGKRQTSFAAVE VVPLIEQTESIEIPENDMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVTCQNEKS QIQNRAAALRVLQSRLLLVQREQEAATKKELAGNITASWGDQMRSYVLAPYQMVKDLR TEHEVNNPSNVFDGDLDGFISAGIRWRKSPDRA" misc_feature complement(2215291..2215623) /gene="prfB" /locus_tag="CMS_2086" /old_locus_tag="CMS2086" /inference="protein motif:HMMPfam:PF00472" /note="HMMPfam hit to PF00472, Class I peptide chain release factor, score 6.5e-61" misc_feature complement(2215519..2215569) /gene="prfB" /locus_tag="CMS_2086" /old_locus_tag="CMS2086" /note="PS00745 Prokaryotic-type class I peptide chain release factors signature." misc_feature complement(2215717..2216043) /gene="prfB" /locus_tag="CMS_2086" /old_locus_tag="CMS2086" /inference="protein motif:HMMPfam:PF03462" /note="HMMPfam hit to PF03462, PCRF, score 4.4e-44" gene 2216368..2217672 /locus_tag="CMS_2087" /old_locus_tag="CMS2087" /db_xref="GeneID:6158878" CDS 2216368..2217672 /locus_tag="CMS_2087" /old_locus_tag="CMS2087" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710775.1" /db_xref="GI:170782442" /db_xref="GeneID:6158878" /translation="MSTPDAPFSLRAVALPALLPALLFSIGEGAIIPIIPIVAGSLGA SLAIAAFIGGMIMLGELVGDIPSGSVVSRIGERTAMIGAAFVSIGGLVLCLLAPNPLV LGVGVFLIGVSTAVFALARHAFMTSFVPQAYRARALSTLGGTFRAGYFVGPFLAAGVI HLTGTSQSAFLIHIVACLAAAVTLLVLPDPMDVVRRNRADLQSAAAATAGEPQDDESV AAAAGTAPPARESAGLGRTLWRFKGVLVKLGSGAALIGAMRAGRGVLLPLWAVSIGIS DANTALIIGIAGGVDFALFYASGQIMDRFGRLWSAVPSMVGLGAGYLVLALTPDLPSN VQWFIGVAMFMSVANGVGSGILMTLGADLAPREDPAPFLGAWRFTGDAGSAASPLLIA ALTSAASLAVASGVMGVLGLIGAGILVRYVPRYAPSKPRPTA" sig_peptide 2216368..2216508 /locus_tag="CMS_2087" /old_locus_tag="CMS2087" /note="Signal peptide predicted for CMS2087 by SignalP 2.0 HMM (Signal peptide probability 0.880) with cleavage site probability 0.238 between residues 47 and 48" misc_feature order(2216395..2216463,2216476..2216544,2216587..2216655, 2216668..2216736,2216872..2216931,2217169..2217237, 2217280..2217348,2217382..2217450,2217556..2217624) /locus_tag="CMS_2087" /old_locus_tag="CMS2087" /note="9 probable transmembrane helices predicted for CMS2087 by TMHMM2.0 at aa 10-32, 37-59, 74-96, 101-123,169-188, 268-290, 305-327, 339-361 and 397-419" misc_feature 2216416..2217555 /locus_tag="CMS_2087" /old_locus_tag="CMS2087" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(2217680..2218219) /locus_tag="CMS_2088" /old_locus_tag="CMS2088" /db_xref="GeneID:6157735" CDS complement(2217680..2218219) /locus_tag="CMS_2088" /old_locus_tag="CMS2088" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710776.1" /db_xref="GI:170782443" /db_xref="GeneID:6157735" /translation="MSGGRPWPRRGRASIVRAGAHEDDGSILPLVIASCALGLAVILM VSAASSLYLERVRLFSLADAAALAGAESFDVDGDGAAAIAVDDDGVALPPLTDAGVAS TVAAFLADEPTAGIHDLHVDGATAPDGRSARVTLSATWIPPVASLFAPDGVRIDVTST ARSVLVGPGAAPVGPGGGG" sig_peptide complement(2217680..2217820) /locus_tag="CMS_2088" /old_locus_tag="CMS2088" /note="Signal peptide predicted for CMS2088 by SignalP 2.0 HMM (Signal peptide probability 0.677) with cleavage site probability 0.636 between residues 47 and 48" misc_feature complement(2218073..2218141) /locus_tag="CMS_2088" /old_locus_tag="CMS2088" /note="1 probable transmembrane helix predicted for CMS2088 by TMHMM2.0 at aa 27-49" misc_feature complement(2218115..2218147) /locus_tag="CMS_2088" /old_locus_tag="CMS2088" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2218216..2218671) /locus_tag="CMS_2089" /old_locus_tag="CMS2089" /db_xref="GeneID:6157736" CDS complement(2218216..2218671) /locus_tag="CMS_2089" /old_locus_tag="CMS2089" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710777.1" /db_xref="GI:170782444" /db_xref="GeneID:6157736" /translation="MRPWSAWGDDRGSAALEFITAGVLLLVPLVYLVIALSAIQGAAL GTEGAARQAARVYVRADDDAAGRREARSAVEVALADQGIAPDGIALDITCTPDPGRCH SPRSLVHVSVRVAAELPLAPPVAGPDAPGSVAVHGDADERVSVFARGGR" misc_feature complement(2218561..2218629) /locus_tag="CMS_2089" /old_locus_tag="CMS2089" /note="1 probable transmembrane helix predicted for CMS2089 by TMHMM2.0 at aa 15-37" gene complement(2218646..2218984) /locus_tag="CMS_2090" /old_locus_tag="CMS2090" /db_xref="GeneID:6157737" CDS complement(2218646..2218984) /locus_tag="CMS_2090" /old_locus_tag="CMS2090" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710778.1" /db_xref="GI:170782445" /db_xref="GeneID:6157737" /translation="MVGALLVVLALSVVQLALALHVRTTVLDAAAEGARTAALAGATR ADGIERTRELITTAVGPRYAEDVTAGTGTVLGHAVVSVTVRTTLPLVGLLGVDRGLEV TGHAAVERLG" sig_peptide complement(2218646..2218738) /locus_tag="CMS_2090" /old_locus_tag="CMS2090" /note="Signal peptide predicted for CMS2090 by SignalP 2.0 HMM (Signal peptide probability 0.933) with cleavage site probability 0.426 between residues 31 and 32" misc_feature complement(2218769..2218804) /locus_tag="CMS_2090" /old_locus_tag="CMS2090" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene complement(2219023..2219217) /locus_tag="CMS_2091" /old_locus_tag="CMS2091" /db_xref="GeneID:6157738" CDS complement(2219023..2219217) /locus_tag="CMS_2091" /old_locus_tag="CMS2091" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710779.1" /db_xref="GI:170782446" /db_xref="GeneID:6157738" /translation="MTDERGALGADAAPGSPWDDDRGDVPGWVLITLMTAGLVIILWG VAGPLLQNVFTQAIDRVTSF" misc_feature complement(2219068..2219136) /locus_tag="CMS_2091" /old_locus_tag="CMS2091" /note="1 probable transmembrane helix predicted for CMS2091 by TMHMM2.0 at aa 28-50" gene complement(2219268..2220219) /locus_tag="CMS_2092" /old_locus_tag="CMS2092" /pseudo /db_xref="GeneID:6157739" misc_feature complement(2219299..2219685) /locus_tag="CMS_2092" /old_locus_tag="CMS2092" /inference="protein motif:HMMPfam:PF00482" /note="HMMPfam hit to PF00482, Bacterial type II secretion system protein, score 2e-12" /pseudo gene complement(2220216..2221040) /locus_tag="CMS_2093" /old_locus_tag="CMS2093" /db_xref="GeneID:6157740" CDS complement(2220216..2221040) /locus_tag="CMS_2093" /old_locus_tag="CMS2093" /codon_start=1 /transl_table=11 /product="putative type II secretion protein protein" /protein_id="YP_001710780.1" /db_xref="GI:170782447" /db_xref="GeneID:6157740" /translation="MLLISPRLWPASPDGSTRSRGLTASVHDRLTHAGLARVSVSSFL AVSALVGLAAGVLVEALLRVDGAALAAAATGLLLPWAVVGARSASRRRAHREVWPDVV DHLVSAVRAGMGLPDAVASLAVAGPVVLRPAFREFASVHRTTGSFAVALDELKEQLAD PTADRILETLRMAREVGGTQLPDVLRGLARFLRDEAAIRSEAEARQSWVVNAAKLGVA APWIILALLSTRSEAVAAYDTAAGTVVIVVGLVVSAVAYRLMLALGRLPEDRRWFA" misc_feature complement(order(2220258..2220326,2220354..2220422, 2220786..2220845,2220855..2220923)) /locus_tag="CMS_2093" /old_locus_tag="CMS2093" /note="4 probable transmembrane helices predicted for CMS2093 by TMHMM2.0 at aa 40-62, 66-85, 207-229 and 239-261" misc_feature complement(2220354..2220740) /locus_tag="CMS_2093" /old_locus_tag="CMS2093" /inference="protein motif:HMMPfam:PF00482" /note="HMMPfam hit to PF00482, Bacterial type II secretion system protein, score 1.1e-07" gene complement(2221076..2222266) /locus_tag="CMS_2094" /old_locus_tag="CMS2094" /db_xref="GeneID:6157741" CDS complement(2221076..2222266) /locus_tag="CMS_2094" /old_locus_tag="CMS2094" /codon_start=1 /transl_table=11 /product="putative type II secretion protein" /protein_id="YP_001710781.1" /db_xref="GI:170782448" /db_xref="GeneID:6157741" /translation="MRERLRDDGAAADPAGTAAVVREEVRRFAEQALGSDSRLLDDEA ATERQVLARITGFGALQPLLDDDSIEEIWINAPTRVFVARAGVAELTPLVLTDAEVRD LVERMLQSSGRRVDLSTPFVDASLPDGSRLHVVIPDVTRRHWAVNIRKFSRRIRDFDH LVALGSLPLQAAEFLRMSVRAGLSIVVSGATHTGKTTMIDALLSAARASDRIVTVEET FELDPAGRDVVAMQCRQPSLEGSGEITLRRLIKEALRMRPDRLVVGEVREAECLDLLI ALNSGVPGMCSIHANSAREALVKLCTLPLLAGRNIDSAFVVPTVATSVDLVVHLEVLP SGARRVVDILAPGGRHAGMVIEASSVFALEDGILTSTGGQPAHLAKYRAAGLDPLRIL VGAP" misc_feature complement(2221265..2222131) /locus_tag="CMS_2094" /old_locus_tag="CMS2094" /inference="protein motif:HMMPfam:PF00437" /note="HMMPfam hit to PF00437, Bacterial type II secretion system protein E, score 4.1e-56" misc_feature complement(2221679..2221702) /locus_tag="CMS_2094" /old_locus_tag="CMS2094" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2222383..2223816) /gene="xylB" /locus_tag="CMS_2095" /old_locus_tag="CMS2095" /db_xref="GeneID:6157742" CDS complement(2222383..2223816) /gene="xylB" /locus_tag="CMS_2095" /old_locus_tag="CMS2095" /EC_number="2.7.1.17" /codon_start=1 /transl_table=11 /product="xylulose kinase" /protein_id="YP_001710782.1" /db_xref="GI:170782449" /db_xref="GeneID:6157742" /translation="MLIVTTKTLVAGIDSSTQSCKVVVRDLDTGALVRSGRASHPDGT EVDPERWWDALLAAIADAGGLDDVAAISVGGQQHGMVCLDESGAVVRDALLWNDTRSA QAAADLRDELGADAWASATGVVPVASFTATKLRWLRDAEPENAARVAAVALPHDWLNW RLLGHGAGSPDLAALSTDRSDASGTAYWSSVTGEYRLDLLERALGRVVGLPRVLGPGE SAGVTGDGIPGVPAGIPVGPGAGDNAAAALGLGAVPGDVVVSIGTSGTVFAVTADPIT DATGTVAGFADATGNFLPLIATLNAARVLDGGARLLGVDHARLSELALEAPAGSDGLV LLPYFEGERTPNLPDATASLHGMTLRNSTPATMARAHVEGMLCGLADGLDAITRQGVE VERVLLIGGGAKNRAVREIAPTIFGVPIHVPDAGEFVADGAAKQAAWILTGSVPEWPL AGDEVFDAPGVPAVREAYAAAKAELGY" misc_feature complement(2222395..2223063) /gene="xylB" /locus_tag="CMS_2095" /old_locus_tag="CMS2095" /inference="protein motif:HMMPfam:PF02782" /note="HMMPfam hit to PF02782, Carbohydrate kinase, FGGY,score 6.1e-31" misc_feature complement(2223070..2223792) /gene="xylB" /locus_tag="CMS_2095" /old_locus_tag="CMS2095" /inference="protein motif:HMMPfam:PF00370" /note="HMMPfam hit to PF00370, Carbohydrate kinase, FGGY,score 3.3e-59" gene 2223849..2223930 /locus_tag="CMS_r030" /old_locus_tag="CMSr030" /db_xref="GeneID:6159103" tRNA 2223849..2223930 /locus_tag="CMS_r030" /old_locus_tag="CMSr030" /product="tRNA-Leu" /db_xref="GeneID:6159103" gene 2223994..2224917 /locus_tag="CMS_2096" /old_locus_tag="CMS2096" /db_xref="GeneID:6159047" CDS 2223994..2224917 /locus_tag="CMS_2096" /old_locus_tag="CMS2096" /note="catalyzes the formation of pyruvate from D-cysteine" /codon_start=1 /transl_table=11 /product="D-cysteine desulfhydrase" /protein_id="YP_001710783.1" /db_xref="GI:170782450" /db_xref="GeneID:6159047" /translation="MDERIRLWTDPTPVHPVPRLAEALGLHPERLLMKRDDLIGWGGG GNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAAGASLGLDVVLVLEGHEVAA RGNVLLDGLFGARIEWSGDEGAESRAASVVAELEGAGTRVHRVAFGGSDAHSVQGFVD AGHELTAQVGAVDHVVVALGSGGTMAGLVEALGPERVLGVHCGAVAEPRAVVAGFLTE RGTGIEAAALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAA VGDGSIGADDRVVLWHSGGVPGLFGHADLGA" gene 2225042..2225764 /locus_tag="CMS_2097" /old_locus_tag="CMS2097" /db_xref="GeneID:6157743" CDS 2225042..2225764 /locus_tag="CMS_2097" /old_locus_tag="CMS2097" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710784.1" /db_xref="GI:170782451" /db_xref="GeneID:6157743" /translation="MHPQLFDFLDSTTLIESFGGFALIGICLIIFAETGLLFGFLFPG DTLLVIAGLTLPGITGIDIWWVCLAIAFSAFAGGEVGYLIGHKAGPKVFERKDSGIFS RQNVVRTNAFFARFGGLAVIAARFVPIVRTFAPIAAGVGHMDYRKYSFYNAIGALLWG AGLTFLGHLLNGFPPIRDFVTHYIDYVLLGAVFITVVPAAIHFLRARKHAHDAAGVLP SGEDLALTPEEFDQDPSNDPRR" misc_feature order(2225099..2225167,2225228..2225296,2225372..2225428, 2225489..2225557,2225585..2225653) /locus_tag="CMS_2097" /old_locus_tag="CMS2097" /note="5 probable transmembrane helices predicted for CMS2097 by TMHMM2.0 at aa 20-42, 63-85, 111-129, 150-172 and 182-204" misc_feature 2225111..2225593 /locus_tag="CMS_2097" /old_locus_tag="CMS2097" /inference="protein motif:HMMPfam:PF00597" /note="HMMPfam hit to PF00597, DedA, score 9.4e-18" gene complement(2225835..2226857) /locus_tag="CMS_2098" /old_locus_tag="CMS2098" /db_xref="GeneID:6157744" CDS complement(2225835..2226857) /locus_tag="CMS_2098" /old_locus_tag="CMS2098" /codon_start=1 /transl_table=11 /product="putative cation efflux protein" /protein_id="YP_001710785.1" /db_xref="GI:170782452" /db_xref="GeneID:6157744" /translation="MRSGVVPDCAPGWIRMTAGPYGGRMAPGSHDHGAATTDRRRLVI AIAITATVLVIAIAITATVLVVEVVGALVSGSLALLADAGHMTSDLLGLGIALVATIV AARPATDRHTFGFQRGEVLGALVNGLILAGVAVYVAVQGVQRLLAPQGPEVDPGVMLM AAGIGLVANVAALVVLRGGAGSSINMRGAYLEVLGDAFGSVATIAAGVVILVTGFGRA DAIASLVIAALIVPRAVVLLRDVVRVLNESTPVGTEPERIRAHLLETPGVTAVHDVHV WAITSGSPVFTAHVVVEQEVFRDGRTGELLDLLAGCLDDHFDVEHSTFQLEPEEHAGH EHRHHV" misc_feature complement(2225859..2226701) /locus_tag="CMS_2098" /old_locus_tag="CMS2098" /inference="protein motif:HMMPfam:PF01545" /note="HMMPfam hit to PF01545, Cation efflux protein,score 1.3e-79" misc_feature complement(order(2226147..2226200,2226228..2226296, 2226330..2226389,2226432..2226500,2226537..2226605, 2226663..2226731)) /locus_tag="CMS_2098" /old_locus_tag="CMS2098" /note="6 probable transmembrane helices predicted for CMS2098 by TMHMM2.0 at aa 43-65, 85-107, 120-142, 157-176,188-210 and 220-237" gene complement(2226876..2227370) /locus_tag="CMS_2099" /old_locus_tag="CMS2099" /db_xref="GeneID:6157745" CDS complement(2226876..2227370) /locus_tag="CMS_2099" /old_locus_tag="CMS2099" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710786.1" /db_xref="GI:170782453" /db_xref="GeneID:6157745" /translation="MEDGTTFEENALIKARAAALHTGHATLADDSGIGVDILGGSPGI FSARWSGPARDSRANLELLLWQLGDVPDAHRGARFTCAAAIVVPTADGLVERTALGVW EGSVLREVAGEGGFGYDPIFRPATGGASAAALSADEKNRVSHRALAFDAIMPVVRREL LGEG" misc_feature complement(2226903..2227370) /locus_tag="CMS_2099" /old_locus_tag="CMS2099" /inference="protein motif:HMMPfam:PF01725" /note="HMMPfam hit to PF01725, Ham1-like protein, score 3.3e-26" gene complement(2227495..2228232) /gene="rph" /locus_tag="CMS_2100" /old_locus_tag="CMS2100" /db_xref="GeneID:6157746" CDS complement(2227495..2228232) /gene="rph" /locus_tag="CMS_2100" /old_locus_tag="CMS2100" /EC_number="2.7.7.56" /note="RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /protein_id="YP_001710787.1" /db_xref="GI:170782454" /db_xref="GeneID:6157746" /translation="MTDDTPRHDGRTADQLREITIERDWSEQAEGSALISFGRTRVLC TASFTNRVPRWKAGSGQGWVTAEYAMLPRATNERMDREAVKGKVGGRTHEISRLIGRS LRAVVDMKALGENTVVIDCDVLQADGGTRTAAITGAYVALADALEWGRERKFIAQRAT PLKDSVAAVSVGIVDGKPLLDLAYVEDVRAETDMNVVMTGSGSFVEVQGTAEGAPFDR AELDALLDLALGGGTTLTALQAQALGR" misc_feature complement(2227540..2227743) /gene="rph" /locus_tag="CMS_2100" /old_locus_tag="CMS2100" /inference="protein motif:HMMPfam:PF03725" /note="HMMPfam hit to PF03725, 3' exoribonuclease, score 1.3e-20" misc_feature complement(2227789..2228190) /gene="rph" /locus_tag="CMS_2100" /old_locus_tag="CMS2100" /inference="protein motif:HMMPfam:PF01138" /note="HMMPfam hit to PF01138, 3' exoribonuclease, score 2.9e-43" misc_feature complement(2227834..2227872) /gene="rph" /locus_tag="CMS_2100" /old_locus_tag="CMS2100" /note="PS01277 Ribonuclease PH signature." gene complement(2228241..2229125) /gene="racE" /locus_tag="CMS_2101" /old_locus_tag="CMS2101" /db_xref="GeneID:6158944" CDS complement(2228241..2229125) /gene="racE" /locus_tag="CMS_2101" /old_locus_tag="CMS2101" /EC_number="5.1.1.3" /note="converts L-glutamate to D-glutamate, a component of peptidoglycan" /codon_start=1 /transl_table=11 /product="glutamate racemase" /protein_id="YP_001710788.1" /db_xref="GI:170782455" /db_xref="GeneID:6158944" /translation="MSDAPIGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGD KPIADVRRYALAVLDDLVERGVKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRT AVSVTRNHRVGVIATHATVTSRAYDDAFAAAPHLALTSAEAPDFVGFVERGETSGPEL MSAAEGYLAPLRAAGVDTLVLGCTHYPFLEGAISLIMGPDVTLVSSDTETAKDVYREL VSAGLERRSDAPPVIRYEATGGSASDFETLAHRMLGSGVTHVELVETGAITLPRRPRP DAATPPDADGTPSTPDPS" misc_feature complement(2228469..2229113) /gene="racE" /locus_tag="CMS_2101" /old_locus_tag="CMS2101" /inference="protein motif:HMMPfam:PF01177" /note="HMMPfam hit to PF01177, Asp/Glu racemase, score 9.6e-82" misc_feature complement(2228559..2228591) /gene="racE" /locus_tag="CMS_2101" /old_locus_tag="CMS2101" /note="PS00924 Aspartate and glutamate racemases signature 2." misc_feature complement(2228892..2228918) /gene="racE" /locus_tag="CMS_2101" /old_locus_tag="CMS2101" /note="PS00923 Aspartate and glutamate racemases signature 1." gene complement(2229184..2230647) /locus_tag="CMS_2102" /old_locus_tag="CMS2102" /db_xref="GeneID:6158918" CDS complement(2229184..2230647) /locus_tag="CMS_2102" /old_locus_tag="CMS2102" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710789.1" /db_xref="GI:170782456" /db_xref="GeneID:6158918" /translation="MERTRWILADQLGDHFDDGGPMLLIESRGLLARRPYHRAKAHLI LSGIRHRARALGDRVEFHQVDHYREVVEGRNDLEVIDPTSRGLRRLVAEIGAHVLPSR GFVTSEQEFAEWMAGRTSNRLVMEDFYRWSRARTGILMDGDVPVGGRWNYDHDNREPP PKGATSLGLPEPWWPEEDEIDQEVRADLDEWERKGLVRFVGEDGPRRFAVTPEEGRLA LDDFVASRLNDFGPFEDASLAGDWTMAHSLLSATMNMGVLDPADVIERIVAEHAAGHA PIQSVEGIVRQIMGWRDYVWHLYWAFEDDYTSQNRLDAHRGVPTALQELDASGIEAAC LSHVVDKVRTHGWAHHIERLMILGNLALQRGYDPAAMNDWFIDSFVDGTPWVMPANVV GMALHADGGRMATKPYAGGGAYIDRMSDHCGGCPFDPKVRVGPTACPYTAGYWWFLDR NQERLRGNARMAQPLAGLRRLKDLPELVAQEDARRSL" misc_feature complement(2229187..2230584) /locus_tag="CMS_2102" /old_locus_tag="CMS2102" /inference="protein motif:HMMPfam:PF04244" /note="HMMPfam hit to PF04244, Deoxyribodipyrimidine photolyase-related protein, score 3.7e-104" gene 2230738..2232051 /locus_tag="CMS_2103" /old_locus_tag="CMS2103" /db_xref="GeneID:6157747" CDS 2230738..2232051 /locus_tag="CMS_2103" /old_locus_tag="CMS2103" /note="catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="YP_001710790.1" /db_xref="GI:170782457" /db_xref="GeneID:6157747" /translation="MHQATSLLTDRYELTMLDAALKAGTHDRECVFECFARRLPSGRR FGVVAGTGRLLELIRDFRFGDAELEYLRTERVVGEEALAWLADYRFRGRITGYREGEV YFPGSPLLTVEAPFADGVILETLVLSVLNYDSAVASAAARMVQVAGGRPLAEMGSRRT GERSAVAAARAAFIAGFSATSNLEAGRTWGVPTMGTAAHSFTLLHDTEEQAFRAQVEA LGAGTTLLVDTYDVRQGVDTAVRVAGTGLGAVRLDSGDLPVLVGEVRAQLDALGATGT RITVTNDLDEHGIAGLAASPVDSYGVGTSLVTGSGAPAAGMVFKLVAHRDAGGGEWVS VAKRSTGKQSRGGLKGARRRHDAQGVATSELVTVGPHPAPLPGDRDLVVTLAEAGEPD PRWLGREGTAVAREHHARVVRDLPAQAFRLRAGDPAIPTEEGAPA" misc_feature 2230750..2231814 /locus_tag="CMS_2103" /old_locus_tag="CMS2103" /inference="protein motif:HMMPfam:PF04095" /note="HMMPfam hit to PF04095, Nicotinate phosphoribosyltransferase and related, score 1.1e-07" gene complement(2232101..2232388) /locus_tag="CMS_2104" /old_locus_tag="CMS2104" /db_xref="GeneID:6157748" CDS complement(2232101..2232388) /locus_tag="CMS_2104" /old_locus_tag="CMS2104" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710791.1" /db_xref="GI:170782458" /db_xref="GeneID:6157748" /translation="MVILSIEQAPGRPAQGGGTDTLDRELEELLEQETIEPGDHERFS HYVKKDKILESAISGKPVKALCGKKWLPGRDPEKFPVCPDCKRIYENMKPE" gene complement(2232450..2234021) /locus_tag="CMS_2105" /old_locus_tag="CMS2105" /db_xref="GeneID:6157749" CDS complement(2232450..2234021) /locus_tag="CMS_2105" /old_locus_tag="CMS2105" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710792.1" /db_xref="GI:170782459" /db_xref="GeneID:6157749" /translation="MVALVLRLRLALLANAFRRSPWQVLGLVAAGVYGLLVTVLAVGA LAGLRDADVASARDVVVAGGALVVLGCLVVPLVLGSQDAMDPRRFAPYGIEPRRLAVA LAAAAAVSVPGAVLVVVALTTVVTWARDPLTALVAVVSTCAAVVTCVLVARISTVLSF VLLSTRRAREATGLGAGLVAVLLVPAVIALAQADLLDDGLRPVRGVLGAIAWTPLGAA WSAPAAAVAGDGGAAAGMLLVAVASAALLALAWIRLVPWALTAPDRAGGGRVQDGLGW FGRFGATPAGAVAARSVTYWIRDPRYRATLVLIPVLPLVLLIPLVIVDVDAHVLALVP LPVMALFLGWSAHNDTAHDHTAVWLHVVSGIRGVADRVGRLVPVLAIGVPLVAIGAPL SALGFGDASVLPSVIGVSGGVLLVGMGLASLFSARFPYPASRPGDSPFHAPQSVSAGG STVPTLSFLATVVLALPSAWLGWMGLVHGGAYPIWSLVVGLGIGIVTLVAGVAGGGRV FERRGPELLAFAQRH" sig_peptide complement(2232450..2232617) /locus_tag="CMS_2105" /old_locus_tag="CMS2105" /note="Signal peptide predicted for CMS2105 by SignalP 2.0 HMM (Signal peptide probability 0.812) with cleavage site probability 0.328 between residues 56 and 57" misc_feature complement(order(2232513..2232581,2232591..2232659, 2232750..2232818,2232831..2232899,2232984..2233043, 2233053..2233112,2233131..2233199,2233257..2233325, 2233338..2233406,2233434..2233502,2233563..2233631, 2233659..2233727,2233788..2233856,2233884..2233952)) /locus_tag="CMS_2105" /old_locus_tag="CMS2105" /note="14 probable transmembrane helices predicted for CMS2105 by TMHMM2.0 at aa 24-46, 56-78, 99-121, 131-153,174-196, 206-228, 233-255, 275-297, 304-323, 327-346,375-397, 402-424, 455-477 and 481-503" gene complement(2233997..2235940) /locus_tag="CMS_2106" /old_locus_tag="CMS2106" /db_xref="GeneID:6157750" CDS complement(2233997..2235940) /locus_tag="CMS_2106" /old_locus_tag="CMS2106" /note="Match is to the C terminal portion. N-terminal half has no significant database matches." /codon_start=1 /transl_table=11 /product="putative ABC transporter, ATP-binding protein" /protein_id="YP_001710793.1" /db_xref="GI:170782460" /db_xref="GeneID:6157750" /translation="MTDAPDETTPTDATSDSSAEPRDHTDRAASLPAEEPLADAAPAE PEATGTVAEAAPPRPPRPGQRVPRRATAPSPRTAPAVIVAPTPPRVKPTSVVAPVSRS TAAAAEGDGGSAATTSRPPRVRRRTRVQRAAGSAEVAPGAGSGTAPGPVDDETAAGST AGSAATPVKDPDAAPQDGPEATRPDRDGLTELSSMFTDADPQPAVEPVHAVVEQHVAP PDDDAAPDPADRPRASPPAAEADVPADVEATDPERVAHEDVDEPEPDVEASTEAEREP DLMIEPASSPVDLPDAQQDVVAEDEPEADSAPEPEAEPAVEADPLAASEPVVGVVTAT ASVADDDEPAPGPDPEPARTVTVRTDSLTAPRSTRPGLAGVAETALTPSVRGDRAAAP ELGDDVLVIDGLTKRFDEKVAVDDIALTVRAGSFYGIVGPNGAGKTTTMSMVTGLLRP DAGTVTVNGIDVWADPLTAKRSIGVLPDRLRLFDRLTGAQLLHYSGALRGLDDAEIRS RSADLIAAFGLEDAVGRLVTDYSAGMTKKVALACAMIHSPRMLVLDEPFESVDPVSAA NVVEILQDYVAHGGTVVLSSHGMDFIQRICDHVAIIVNGRVLAAGTMDEVRAGRSLEE RFVALAGGRRTAEGFSWLHSFSD" misc_feature complement(2234126..2234671) /locus_tag="CMS_2106" /old_locus_tag="CMS2106" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.5e-52" misc_feature complement(2234627..2234650) /locus_tag="CMS_2106" /old_locus_tag="CMS2106" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2236234..2236926 /locus_tag="CMS_2107" /old_locus_tag="CMS2107" /db_xref="GeneID:6157751" CDS 2236234..2236926 /locus_tag="CMS_2107" /old_locus_tag="CMS2107" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710794.1" /db_xref="GI:170782461" /db_xref="GeneID:6157751" /translation="MTTQVVILAAGMGSRLGRSLPKPLTELSDGRTIMGQQFDNIRFG LGDDARVSIVVGYKLDHIIDAFPDADYIYNEQYDQTNTSKSLLRALRASAPGGVLWMN GDVVFDPMILRRAAAMIARDQSFVTVNTSRVSDEEVKYTTSPEGFIRELSKTVKGGLG EAVGINYVSTADKPVLIRQLARVADQDYFERGIELAIEQDSLLVEPVDISDLYAVEVD FAEDLERANLFV" gene 2236963..2237763 /locus_tag="CMS_2108" /old_locus_tag="CMS2108" /db_xref="GeneID:6157752" CDS 2236963..2237763 /locus_tag="CMS_2108" /old_locus_tag="CMS2108" /codon_start=1 /transl_table=11 /product="putative polysaccharide export protein" /protein_id="YP_001710795.1" /db_xref="GI:170782462" /db_xref="GeneID:6157752" /translation="MRDAASPGRASRTPVARYRRSLWLLTTRDLKVRYSTSALGWFWS ILDPLVMSGIYWFVFTVVFSRDVGEEPYIVFLLAALLPWMWFTGATSDFTRAFSSQAK LVRSTRIPRSIWVLRLVLAKGFEFVASLPVLAVFAIVAGARLDVLVLLLPLAVLIQAA LLLGIGLIVAPLVVFFRDLERAVKLVLRFLFYASPIVYSSSDLPADLHPWAALNPLTG IFGLYRAAFFPSELDWYAVGVSAAISAVLVLVGSLVFRRSLPAVLKEI" misc_feature order(2237074..2237142,2237185..2237253,2237314..2237382, 2237425..2237493,2237530..2237598,2237656..2237724) /locus_tag="CMS_2108" /old_locus_tag="CMS2108" /note="6 probable transmembrane helices predicted for CMS2108 by TMHMM2.0 at aa 44-66, 81-103, 124-146, 161-183,196-218 and 238-260" misc_feature 2237248..2237661 /locus_tag="CMS_2108" /old_locus_tag="CMS2108" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 2.2e-12" gene 2237763..2238542 /locus_tag="CMS_2109" /old_locus_tag="CMS2109" /db_xref="GeneID:6157753" CDS 2237763..2238542 /locus_tag="CMS_2109" /old_locus_tag="CMS2109" /codon_start=1 /transl_table=11 /product="putative polysaccharide export protein" /protein_id="YP_001710796.1" /db_xref="GI:170782463" /db_xref="GeneID:6157753" /translation="MGASHPEPTDRTVLAVEDAGIRFRRNRKARRSFKDLFAGSARRA RPGEFWALRHVSFEVRAGEAIGVVGRNGQGKSTLLKLVAEVLIADEGSIGVHAGVAPL IEITGGFVNDLTVRDNIYLTAGLHGMSKAEIDARFDEIIAFAEIPDFVDTPYKHLSSG MKVRIAFAVISRLDEPVLLVDEVLAVGDRAFREKCYHRIEEMLAEGRTLFFVSHNERD LRRFCTRGLYLDKGALVLDGPMDQVMDAYNADHNPPDSSGS" misc_feature 2237946..2238458 /locus_tag="CMS_2109" /old_locus_tag="CMS2109" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.7e-31" misc_feature 2237967..2237990 /locus_tag="CMS_2109" /old_locus_tag="CMS2109" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2238231..2238275 /locus_tag="CMS_2109" /old_locus_tag="CMS2109" /note="PS00211 ABC transporters family signature." gene 2238627..2238938 /locus_tag="CMS_2110" /old_locus_tag="CMS2110" /db_xref="GeneID:6157754" CDS 2238627..2238938 /locus_tag="CMS_2110" /old_locus_tag="CMS2110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710797.1" /db_xref="GI:170782464" /db_xref="GeneID:6157754" /translation="MLRPVPPLPTRPDPEPAYRVPWHFDRTLERPRFALVNVGDEVLH AISLHLLGSGTMLSRAPVTVRPGERLSTTIRGDDLALDTILVVRWFRPDGGEYLWRVS F" gene complement(2238928..2239251) /locus_tag="CMS_2111" /old_locus_tag="CMS2111" /db_xref="GeneID:6157755" CDS complement(2238928..2239251) /locus_tag="CMS_2111" /old_locus_tag="CMS2111" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710798.1" /db_xref="GI:170782465" /db_xref="GeneID:6157755" /translation="MVTTVSDAAAEFGSRVREQRQRIGISQETLAELSGIHWTALGKI ERGQRNPSLRNIIKIASGLDVDAGLLVTGLTADMLPQDDGDSPAELIRLERERDRRGT TPVRS" misc_feature complement(2239042..2239206) /locus_tag="CMS_2111" /old_locus_tag="CMS2111" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 1e-14" misc_feature complement(2239114..2239179) /locus_tag="CMS_2111" /old_locus_tag="CMS2111" /note="Predicted helix-turn-helix motif with score 1283.000, SD 3.56 at aa 25-46, sequence ISQETLAELSGIHWTALGKIER" gene 2239406..2240155 /locus_tag="CMS_2112" /old_locus_tag="CMS2112" /db_xref="GeneID:6157756" CDS 2239406..2240155 /locus_tag="CMS_2112" /old_locus_tag="CMS2112" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710799.1" /db_xref="GI:170782466" /db_xref="GeneID:6157756" /translation="MKDASELDPTVATGIDRLLSVQRPVVLAHIRSIRARHPEASPDR IIAILEKRFLAAVTAGGAAVGANAVIPGVGTGVSLALTGVETAGFLEASALFAQSITE VHGITVEDPARARALVMTMMLGAPGAQVIQQFTGQFSGQPVDRNANWGRAITSGLPSF AIGPIADRIKRAFIKRFVVNQSASAIGRAVPFGIGAVIGGAGNRMLGSKIVASSRQAF GPAPAGFPDELAVPERKPRVIRVAEKKAAKG" misc_feature 2239439..2239468 /locus_tag="CMS_2112" /old_locus_tag="CMS2112" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." gene complement(2240198..2241454) /locus_tag="CMS_2113" /old_locus_tag="CMS2113" /db_xref="GeneID:6157757" CDS complement(2240198..2241454) /locus_tag="CMS_2113" /old_locus_tag="CMS2113" /note="probably involved in polysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710800.1" /db_xref="GI:170782467" /db_xref="GeneID:6157757" /translation="MRAVRSLVRQRRARGTLQRKLAVRAPSPRGEYRIAVYFADSAVN MYQIRQWYRPLVELARTHPVVILSRHPGGANALLDESPLPVEYVRRVADLEQVIAEQD IRIVLYVNQNTRNFQMMRYGRRWHVFVNHGESDKMYMTTNQFKAYDYSLIAGDAARAR LGKVLWDYDLDRRAIPIGRPQADHYSGELPYAPDDRTVVLYAPTWEGDRAAAAYGSIA THGVPLVRDLIVTGRHRIVYRPHPRSGVVDPEYARANREIATMLERANAQDPSAQHVV DRSRELAWQLSAADLAIVDISAMVYDRLAAGRPLLVTRPVRPEAQIDTDGYLSDCEWL TADDARDIVTRLDALQQDAAADRRLAAWVRHYFGDTSPGAATARFHEAIEHLMGEWER HAALHARDGDVVPPSDDPVDDEDEEA" gene complement(2241582..2242457) /locus_tag="CMS_2114" /old_locus_tag="CMS2114" /db_xref="GeneID:6157758" CDS complement(2241582..2242457) /locus_tag="CMS_2114" /old_locus_tag="CMS2114" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710801.1" /db_xref="GI:170782468" /db_xref="GeneID:6157758" /translation="MTGSLPRVGVVILSQGRRPEGLAAAIASVLRQERVSTDVVVVGN GWDPQGLPDGVRGLHLPENLGIPAGRNAGVPLVVGETLFFLDDDETVPSAAFLADCLE LMRRADDVALIQPRIVDPTGAATPRRWIPRIRKGDPARASAVMSVLEGAVVVRRDAFE AADGWAGEFFYAHEGIELAWRIWDQGLRAWYAGDLVAHHPAVAPTRHAEYHRLTARNR VWLARRNLPLPLVPVYVGSWTAVQLIRSARNRDGLGTWLRGWREGWTTSPGPRRPMSW GTVVRMTRAGRPPVI" misc_feature complement(2241969..2242433) /locus_tag="CMS_2114" /old_locus_tag="CMS2114" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 1.2e-06" gene complement(2242454..2243275) /locus_tag="CMS_2115" /old_locus_tag="CMS2115" /db_xref="GeneID:6157759" CDS complement(2242454..2243275) /locus_tag="CMS_2115" /old_locus_tag="CMS2115" /codon_start=1 /transl_table=11 /product="putative transferase" /protein_id="YP_001710802.1" /db_xref="GI:170782469" /db_xref="GeneID:6157759" /translation="MSSAPGTGDRGLPSSIAELRRVTQPPDVRLRANAEHWTAHLYLR DLSPYLTWLLLRTRISANGVTVVMILTGWAAAAALLIPGIGGAALALVLGQLQMLVDC CDGEVARWRRTSSPVGHFLDAVGHYSTETLIALALGIRAAVYPFEAPGDLPWTTLAFA LALVIVLNKALNDMVRVARASADLPKAPVGAGTVASQHSLIATARRIVRFLPFHHMFH SVELTIVTFVVALVGLVAGQPETDRVFLAVLVPLAVLALVGHFVMIVTSRRLTSA" misc_feature complement(order(2242475..2242543,2242571..2242639, 2242763..2242822,2243012..2243080)) /locus_tag="CMS_2115" /old_locus_tag="CMS2115" /note="4 probable transmembrane helices predicted for CMS2115 by TMHMM2.0 at aa 66-88, 152-171, 213-235 and 245-267" misc_feature complement(2242484..2243005) /locus_tag="CMS_2115" /old_locus_tag="CMS2115" /inference="protein motif:HMMPfam:PF01066" /note="HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 0.0034" gene complement(2243272..2244276) /locus_tag="CMS_2116" /old_locus_tag="CMS2116" /db_xref="GeneID:6157760" CDS complement(2243272..2244276) /locus_tag="CMS_2116" /old_locus_tag="CMS2116" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710803.1" /db_xref="GI:170782470" /db_xref="GeneID:6157760" /translation="MPILNEVAHVRAAVDSMMRQDYAGDFEVVLALGPSTDGTTEVVR EMSRADPRITSVDNPTGSTPGGLNAAIRATRHPVVIRVDAHSLLPRDYTRIAVETLHA TGADNVGGLMSAEGRTPFEKAVARAYGARVGLGGTAHHVGGKEGPAETAYLGAFRRER LLEVGLFDEGVRRGQDWELNRRLRQSGGLVWFTPRMKVTYRPRSTFRSLIRQFFATGL WRGELARRYTRQNSVRYFVPPVAVAGVAAGLVLGTAGLVGAALGMPGLRRLVGAFVAP GVYAGFVLISTVSVASRDGAATMLRFAAVLPSIHFSWGTGFVLGFLELTDDLDGHTGR" misc_feature complement(order(2243314..2243382,2243401..2243469, 2243506..2243574)) /locus_tag="CMS_2116" /old_locus_tag="CMS2116" /note="3 probable transmembrane helices predicted for CMS2116 by TMHMM2.0 at aa 235-257, 270-292 and 299-321" misc_feature complement(2243782..2244276) /locus_tag="CMS_2116" /old_locus_tag="CMS2116" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 0.0027" gene complement(2244496..2246049) /locus_tag="CMS_2117" /old_locus_tag="CMS2117" /db_xref="GeneID:6157761" CDS complement(2244496..2246049) /locus_tag="CMS_2117" /old_locus_tag="CMS2117" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="YP_001710804.1" /db_xref="GI:170782471" /db_xref="GeneID:6157761" /translation="MTDRSHGEDEHEGGREVDGRAERSSTEAPSSTAPQPGDGGSAWP APAGPAAASHPAPTNPDQRDTLAYGSNAPTDHTATAPLAGPAAEGHEPVGSTTTAPPK KKTNKALPLVAMLAVGALIGGAAGGLTTWAIAHDDASTEAVSQSPANITVNDPDNATP ITAVAAKVSGSVVTIDVAGAQAGGTGSGVILSSDGYVLTNTHVVTLDGQTGDATIQVK TADGALYSAKLVGTDPVVDLAVIKLDDASGLTPIDFADSSKLNVGDTAIAIGAPLGLS GTVTDGIVSALDRSIQVASSAAPTTPGDGSQSDETPFNFWPFGNEGQGGSGGQGGSGG QGGQGGSGAQGQAAASINLAVIQTDAAINPGNSGGALLDGDGKLIGVNVAIANAGGTS STAGSIGVGFAIPSNLAKRVGQEIIQDGKASHGLLGASVRDVAKGDSSTPVGGAFIAE VQSGGAAPAAGLKQGDIVTAFGSIPISKASDLTAQVRALAGGSDVELTVIRGGQKQQV DVKLGTLQQ" misc_feature complement(2244550..2244804) /locus_tag="CMS_2117" /old_locus_tag="CMS2117" /inference="protein motif:HMMPfam:PF00595" /note="HMMPfam hit to PF00595, PDZ/DHR/GLGF, score 2.3e-09" misc_feature complement(2244814..2245551) /locus_tag="CMS_2117" /old_locus_tag="CMS2117" /inference="protein motif:HMMPfam:PF00089" /note="HMMPfam hit to PF00089, Peptidase S1, chymotrypsin,score 2.8e-08" misc_feature complement(2245651..2245719) /locus_tag="CMS_2117" /old_locus_tag="CMS2117" /note="1 probable transmembrane helix predicted for CMS2117 by TMHMM2.0 at aa 111-133" gene complement(2246279..2247193) /locus_tag="CMS_2118" /old_locus_tag="CMS2118" /db_xref="GeneID:6157762" CDS complement(2246279..2247193) /locus_tag="CMS_2118" /old_locus_tag="CMS2118" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710805.1" /db_xref="GI:170782472" /db_xref="GeneID:6157762" /translation="MRLSYPSILIVAVVLTVVVPASASKAADGYCGIGYTRMPTCSSG AVGMGEVQLRAETTTEGSPSDDVADHLGQASATAEPRVAKPAPPPPVPRGRLAADVDA PCQPSARLAGGGLCSDGQHAFLPPAKAPTKPADPAPVVAATPGVSLADVAQFVPRDAS IRSQPNGWAIVGAPVNLFTDATTQVVGGTLLGRPAQVRFVPVSFTWDHGDGTSSTVEG PGSSWKALGQQDSTATDTSHVYPSVGVRQVTLTIAYSPSYRFDGGGWQQIPGTLPVQV GPVTLRVLQGSTVLVGGACGTRDAGPGC" sig_peptide complement(2246279..2246356) /locus_tag="CMS_2118" /old_locus_tag="CMS2118" /note="Signal peptide predicted for CMS2118 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 between residues 26 and 27" gene complement(2247184..2247744) /locus_tag="CMS_2119" /old_locus_tag="CMS2119" /db_xref="GeneID:6157763" CDS complement(2247184..2247744) /locus_tag="CMS_2119" /old_locus_tag="CMS2119" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710806.1" /db_xref="GI:170782473" /db_xref="GeneID:6157763" /translation="MHEQPLIPSRRRGGAAALSLALLVTSQLLAGCALSSAPSPAPAP APSLTQEPQDDQAFQDLFARFVGIDLSSETEADLTPLLTGSALQGELDSLKYSADNHQ TVIGKAMSRSFRVTDRGSDARGSEYMTAQACLDISGTRTLDEQGNDVTPQRDAAVALQ MKAVKIADGSWRISDSVRNEDTRACD" sig_peptide complement(2247184..2247318) /locus_tag="CMS_2119" /old_locus_tag="CMS2119" /note="Signal peptide predicted for CMS2119 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.282 between residues 45 and 46" gene 2247925..2249130 /locus_tag="CMS_2120" /old_locus_tag="CMS2120" /db_xref="GeneID:6157764" CDS 2247925..2249130 /locus_tag="CMS_2120" /old_locus_tag="CMS2120" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /protein_id="YP_001710807.1" /db_xref="GI:170782474" /db_xref="GeneID:6157764" /translation="MTIPGAWVRAARGAMLVTPDGFPSTTVFAEMSALAAATGAINLG QGFPDEDGPREVLEAARAAISAGMNQYPPGRGTPELREAVAAHQGRFYGLAVDPDTEV LVTADATEAIAATLLALVEEGDEVVTLEPFYDAYGALISLARGIHRTVPLRAPDFQPR LDDLRRAITDRTRVILLNDPHNPTGTVLSREVRELVVELAIAHDAVIVTDEVYEHLAF DTPHVPVATLPGARERTVTISSGGKTFLTTGWKVGWLTAPAPLVSAILAVKQFLTFVN GAPFQPAIATGLALPDEVYDGIADDLRRKRDVLAAGLTAAGFRIHLPAAGYFIVADAA PLGFPDARELCLRLPELAGVVGVPLSAFCHAPLAAEHASLVRFAFCKRIDVLEEAARR LGALAVGTA" misc_feature 2248192..2249106 /locus_tag="CMS_2120" /old_locus_tag="CMS2120" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 3.2e-26" gene 2249260..2250195 /locus_tag="CMS_2121" /old_locus_tag="CMS2121" /db_xref="GeneID:6157765" CDS 2249260..2250195 /locus_tag="CMS_2121" /old_locus_tag="CMS2121" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001710808.1" /db_xref="GI:170782475" /db_xref="GeneID:6157765" /translation="MIVAENLTKRYGAKTAVDGVSFTVQPGMVTGFLGPNGAGKSTTM RMIVGLDTPTSGSVTVNGRRYRNLQAPLHEVGALLDAKAVHTGRSAYNHLLAMAATHG IPRTRVDEVIEMTGLQPVAKKRVGGFSLGMGQRLGIAVALLGDPRTLILDEPVNGLDP EGVMWVRNITRYLAGQGRTVLLSSHLMSEMAQTADHLIVLGRGRVLADAPVAAVVAGA TSGLVRVRSPHADRLGQAVARPEVVVTSVERDVIEITGLTAAQVGDAAMSAGVVLHEL TPVTASLEDAYLSLTQGDVEYHSAAVGTTEQEIAR" misc_feature 2249338..2249868 /locus_tag="CMS_2121" /old_locus_tag="CMS2121" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.5e-39" misc_feature 2249359..2249382 /locus_tag="CMS_2121" /old_locus_tag="CMS2121" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2250192..2251031 /locus_tag="CMS_2122" /old_locus_tag="CMS2122" /db_xref="GeneID:6157766" CDS 2250192..2251031 /locus_tag="CMS_2122" /old_locus_tag="CMS2122" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710809.1" /db_xref="GI:170782476" /db_xref="GeneID:6157766" /translation="MTATSTTYAPAPVTTGRPTLPRLMRSEWIKLRTLRSTVWCFALV FLLLAGFSALFTPFVVDQLRDQLSLPGVPASDLLIQVGLSGVTLAMLVAGVLGVLVIS GEYSTGMIRSSFSAAPRRLDVIAAKAIVYTVVTFVVTAVAVAAALLIARGYFASAGAE VDVLDGDFLLAALGGVLFVVLIGLMGFGFGLLLRNGAAGIGALVGLVLVVPIVGQLLG GVLDWVADLAPYFPLSAGNRLYSTATGAPGELEFWQALLVMVAWVAVILVPALILAKK RDA" misc_feature order(2250300..2250368,2250426..2250494,2250573..2250641, 2250699..2250767,2250786..2250854,2250945..2251013) /locus_tag="CMS_2122" /old_locus_tag="CMS2122" /note="6 probable transmembrane helices predicted for CMS2122 by TMHMM2.0 at aa 37-59, 79-101, 128-150, 170-192,199-221 and 252-274" gene 2251127..2252368 /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /db_xref="GeneID:6157767" CDS 2251127..2252368 /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /codon_start=1 /transl_table=11 /product="putative two-component sensor kinase" /protein_id="YP_001710810.1" /db_xref="GI:170782477" /db_xref="GeneID:6157767" /translation="MARHPRVVDGAIAIAYTLLSVSAAPVVGSRSSTIPGGVALAVLS ILTGVALMFRRSRPVAVLAVTGAAAAAAALVSGRFDGGAIPIALYALAVYGSSRRAWI GFGGVAVVIAAVTPATAGEGPLALSIATMLLVNLILPLIATLIGTNVGGRKRYVEALR DLAVQLARERDQQARLATAAERTRIAREIHDIVAHGITVMVTLADGAAASAVARPELA RDAMREVAETGRTSLSEMRRMLGVLAEEPGAGDAAPPSLRAPQPGHADLAALVDSFRS TGLPVRFTSTGAPPDDPGRQLAVFRVVQESLTNVLRYAPNADRVEVRVDHRPEEITVE VTDDDLTGPVVPPVPGSGRGLVGVAERMAVYGGTATAGRRETGGWRVLATMPSGLHDV RPGDVSRTADPTDSPRVQEDR" sig_peptide 2251127..2251213 /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /note="Signal peptide predicted for CMS2123 by SignalP 2.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.492 between residues 29 and 30" misc_feature order(2251145..2251213,2251226..2251285,2251298..2251351, 2251361..2251414,2251427..2251486,2251496..2251564, 2251700..2251768) /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /note="7 probable transmembrane helices predicted for CMS2123 by TMHMM2.0 at aa 7-29, 34-53, 58-75, 79-96,101-120, 124-146 and 192-214" misc_feature 2251667..2251873 /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature 2252006..2252290 /locus_tag="CMS_2123" /old_locus_tag="CMS2123" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 3.9e-16" gene 2252425..2253063 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /db_xref="GeneID:6157768" CDS 2252425..2253063 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /codon_start=1 /transl_table=11 /product="putative two-component response regulator" /protein_id="YP_001710811.1" /db_xref="GI:170782478" /db_xref="GeneID:6157768" /translation="MGFRMVLDAEPGIEVVGEAADGRAAVQRTGELAPDIVLMDVRMP GMDGIDATAEIVARHPATRVIVLTTFDLDEYAFAGLRAGASGFLVKDTRPEHLMEAIR AVADGDAAISPRVTRRMIELLGPTMPATGGAAGTGEGAADPRLRPLTARELEVLTALA EGLTNQEIAGRLFLSESTVKTHVGRVLAKLEVRDRVQAVILAYDCGLVRPGA" misc_feature 2252425..2252751 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 9.5e-28" misc_feature 2252857..2253030 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 2e-25" misc_feature 2252908..2252991 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature 2252911..2252976 /locus_tag="CMS_2124" /old_locus_tag="CMS2124" /note="Predicted helix-turn-helix motif with score 1294.000, SD 3.59 at aa 163-184, sequence LTNQEIAGRLFLSESTVKTHVG" gene 2253167..2253541 /gene="clpS" /locus_tag="CMS_2125" /old_locus_tag="CMS2125" /db_xref="GeneID:6157769" CDS 2253167..2253541 /gene="clpS" /locus_tag="CMS_2125" /old_locus_tag="CMS2125" /codon_start=1 /transl_table=11 /product="atp-dependent Clp protease adaptor protein ClpS" /protein_id="YP_001710812.1" /db_xref="GI:170782479" /db_xref="GeneID:6157769" /translation="MTTTAADAHAPRLLPAARRAADPPAGDPGSGTSTGSDTSLLERA STPPVWSCVVWNDPVNLMTYVSYVFRSYFGFTRERADELMLRVHEDGRAVVATGIREE IERHVLAMHGFGLWATLERVDT" misc_feature 2253290..2253526 /gene="clpS" /locus_tag="CMS_2125" /old_locus_tag="CMS2125" /inference="protein motif:HMMPfam:PF02617" /note="HMMPfam hit to PF02617, ATP-dependent Clp protease adaptor protein ClpS, score 1.6e-20" gene 2253538..2254053 /locus_tag="CMS_2126" /old_locus_tag="CMS2126" /db_xref="GeneID:6158634" CDS 2253538..2254053 /locus_tag="CMS_2126" /old_locus_tag="CMS2126" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710813.1" /db_xref="GI:170782480" /db_xref="GeneID:6158634" /translation="MRAFRARPDGTVAAHLEPHEVAMLRGLLGELSGILEEGTATGGA TDGAAPSPVVERLLPQAYPDDAEASAEFRRFTASDLTEAKAANASTVEATLAEADARG AGRRGLLVVLDPTGAQAWLRTLNDLRLAISVPLRIDEAEGWRDRAPSESASLYDWLTF AQGSLIEAVDR" gene 2254167..2255180 /locus_tag="CMS_2127" /old_locus_tag="CMS2127" /db_xref="GeneID:6157770" CDS 2254167..2255180 /locus_tag="CMS_2127" /old_locus_tag="CMS2127" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710814.1" /db_xref="GI:170782481" /db_xref="GeneID:6157770" /translation="MRVVVIGATGNLGTGVLRRLHAAGAEIVGVARRMPDASLEPYSE VTWRLADIGAAGAVSGLAATMRGADAVIHLGWALQPNHRERVMHRTNVIGTAHVLEAV AQAGVPQVVVASSVGAYSAAAKDRPRDETWPTGGIHTSHYSRHKAENERAMDAFDEAH PGIVVTRMRPGLVMHDEAAAEIAGLFLGRWIPTRWLGLATRTPVLPLPRELVSQVVHN EDVADAFWRAVERRAPGAFNVAADPVVDPALVGRLLDARVVTVPLPALRALVSASWRL RVQRTDPGWIDIAANVPVMSTARAREVLGWVPTHTAEEVLVEFGRAFVHRTGREGSAP LAG" gene 2255177..2255806 /locus_tag="CMS_2128" /old_locus_tag="CMS2128" /db_xref="GeneID:6157771" CDS 2255177..2255806 /locus_tag="CMS_2128" /old_locus_tag="CMS2128" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710815.1" /db_xref="GI:170782482" /db_xref="GeneID:6157771" /translation="MTEDADFVAAALEREGAWYRAEAERERLRSDLDFVGASVGAVRG TVRDLGRRRPGMTRDEAVALASELWRSRVYERRLAAVVLLQEHVDGLDNGDLTRIEGF VRDARLRALVDPLALDVIGPLVERLSGVARTRADQALDRWAGEQDVWLRRAALLASTR PLRAGGGDWDAFLRRTRTAEAAPRGAHDVVREAVERVREVVRETRPDLA" gene 2255838..2256752 /locus_tag="CMS_2129" /old_locus_tag="CMS2129" /db_xref="GeneID:6157772" CDS 2255838..2256752 /locus_tag="CMS_2129" /old_locus_tag="CMS2129" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710816.1" /db_xref="GI:170782483" /db_xref="GeneID:6157772" /translation="MTFDDDARIDSSKVTRRRGGRGRTTGIAAGGGGLLVVVAVILVQ QFTGVDLSQIVGGGAGGTGAGGSSQEQDEAIEGCTTGAEANASVECRMAGAADSLDTY WTTAATEVGIADYASPGFSLFDAATSTGCGEATSATGPFYCPPDRRLFVDTTFFDELR TRFGASGGPLAQMYVVGHEWGHHIQQLSGAFDRADRSGTGPDSDSVRLEVQADCDAGA WVGAASEVRDDTGRAFLEPVTPAEVADALDAAAAVGDDRIQAQAGGGVDPDTWTHGSA EQRQRWFEAGRAGGPTSCDTFAVPGSAL" misc_feature 2255838..2256728 /locus_tag="CMS_2129" /old_locus_tag="CMS2129" /inference="protein motif:HMMPfam:PF04228" /note="HMMPfam hit to PF04228, Protein of unknown function Zinc binding 2, score 1.3e-67" misc_feature 2255913..2255981 /locus_tag="CMS_2129" /old_locus_tag="CMS2129" /note="1 probable transmembrane helix predicted for CMS2129 by TMHMM2.0 at aa 26-48" misc_feature 2256360..2256389 /locus_tag="CMS_2129" /old_locus_tag="CMS2129" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene complement(2256763..2257725) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /db_xref="GeneID:6157773" CDS complement(2256763..2257725) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710817.1" /db_xref="GI:170782484" /db_xref="GeneID:6157773" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2256775..2257317) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 6.7e-38" misc_feature complement(2257402..2257467) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2257467..2257588) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2257588..2257653) /locus_tag="CMS_2130" /old_locus_tag="CMS2130" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene 2257842..2258417 /locus_tag="CMS_2131" /old_locus_tag="CMS2131" /db_xref="GeneID:6157774" CDS 2257842..2258417 /locus_tag="CMS_2131" /old_locus_tag="CMS2131" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710818.1" /db_xref="GI:170782485" /db_xref="GeneID:6157774" /translation="MGAGVVAGAPPDVEPSGEPGFVAGAAGPAGGVGAVPSAFVGGVG GVGGVAGVPSAFVGGAGGVDPSGRVTGAGGVVPSGSAGGAGQVAVVPLPDPAWPLVSP PFPSAYAAEENSATRPSDAPAMPTAMPARRFRGAGVGVPGVRAPGPFSKTVMVSSMVV LPCPPRRGCAGGRGSRLGSGSEVLLKFRGPS" gene 2258419..2259129 /locus_tag="CMS_2132" /old_locus_tag="CMS2132" /db_xref="GeneID:6157775" CDS 2258419..2259129 /locus_tag="CMS_2132" /old_locus_tag="CMS2132" /codon_start=1 /transl_table=11 /product="putative two component system response regulator" /protein_id="YP_001710819.1" /db_xref="GI:170782486" /db_xref="GeneID:6157775" /translation="MGPGSPIRGSYSRGMLPPARVLVVEDDQAIRAAVVSTLTAERFV VRGLASGVELEEEVKGFLPDLVVLDWMLPGPSGIQLAERIRRWSDAGVIMLTARDAVE DRLRGFGHGVDDYIVKPFALAELVARVGAVLRRRGRLASVVEIGDLLVDPDAGLARRG GEPLELTSIEFQLLAYLAAHRGRTLSKTQLLTQVWGYDHADPNLVEVHISALRKKMEA HGPRLLHTVRGLGYRVEA" misc_feature 2258473..2258829 /locus_tag="CMS_2132" /old_locus_tag="CMS2132" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 6.2e-36" misc_feature 2258899..2259120 /locus_tag="CMS_2132" /old_locus_tag="CMS2132" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 7.1e-26" gene 2259126..2260592 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /db_xref="GeneID:6157776" CDS 2259126..2260592 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001710820.1" /db_xref="GI:170782487" /db_xref="GeneID:6157776" /translation="MRARSRIAAPDAPLRTGSLRTRTVLAVLALLAVLLVALSLTVQA ILGAQLRQQIQDRLADRASAAAALVGVLDDDALAERLSAQGVAVQITSPDGGAVSARP GRDPLGATLPGPDPLGSAPGPATTATPTTRADAVTVTSSAVSSSDGALTLRSDLSDGT VLELAAGTGSVDDTLASLRGILAVASLAFLLLAAVALVVVVRRTLQPLEDMTGVARSI GRGDRGRRLRPTRPGTELGRTATAFDEMLDDIEHAERQALAAEARMRAFVADAAHELR TPVAGIRASADALVRTDPSAEERERLSVHVVREAIRAGRLVDDMLMMARLDEGLSVEG RPVRVPAAVEQAVAQQQARTPDTRVVADVRVVADVRGAPPAVRADPDRLAQILDNLLQ NAARYARSEVRVEAEAADDGSVRITVADDGPGVPDADRERIFDRLVRLDAGRDRQDGG AGLGLPIARAQGGDLVCLSAEPGAGARFRVTLPVDPAM" sig_peptide 2259126..2259257 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /note="Signal peptide predicted for CMS2133 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.622 between residues 44 and 45" misc_feature order(2259195..2259263,2259660..2259728) /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /note="2 probable transmembrane helices predicted for CMS2133 by TMHMM2.0 at aa 24-46 and 179-201" misc_feature 2259669..2259881 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 1e-13" misc_feature 2259912..2260112 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 3.3e-19" misc_feature 2260257..2260580 /locus_tag="CMS_2133" /old_locus_tag="CMS2133" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 4.7e-30" gene complement(2260631..2261119) /locus_tag="CMS_2134" /old_locus_tag="CMS2134" /db_xref="GeneID:6157777" CDS complement(2260631..2261119) /locus_tag="CMS_2134" /old_locus_tag="CMS2134" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710821.1" /db_xref="GI:170782488" /db_xref="GeneID:6157777" /translation="MMYVLDANVFIQSHRAHYGLDFVPAFWHWLERTFLAGQLVSIIP IRDEIAAGEDDLSEWAKEHPRLFVAMDQACAPSLGALAGWVLGAGYTDAASQEFLSVA DYQLVAFAHAHQLTVVTMERSEPNRRSKVKIPDACAALGVDCTTPFDMLRHEGACFVL GD" gene complement(2261116..2262258) /locus_tag="CMS_2135" /old_locus_tag="CMS2135" /db_xref="GeneID:6157778" CDS complement(2261116..2262258) /locus_tag="CMS_2135" /old_locus_tag="CMS2135" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710822.1" /db_xref="GI:170782489" /db_xref="GeneID:6157778" /translation="MVTHVPVRPEMIGWALERSRMDPESAKYPQFRRWADGDGAPTFR QLETFARAAHVPLGYLFLPRPPREEVPIPDLRTIRDAGVRKPSPELLDTIHLAQRRQD WFRDHARDRGQQELPFVGSVNRDTDPLAVAADIRSRLGFTVEARRRGDALRTAIDLVE GLGVLVMVSGIVGSNTHRKLTIDEFRGFALTDPRAPVVFVNGVDAKTAQLFTLMHELA HIWAGQSALSDIEFDSPAVHAEERWANAVAAEVLVPRADLERAYSGDAKDPSIELLTK RYRVSALVVLHRLFDTGLLPWDEFRRRYVTEEIRGRELADLEVASRSDGGNYYNTHLR HIGHAFARGVIVDTMEGRTLYRDAFRLLDTRKHATFTEMAERLGVA" misc_feature complement(2261389..2261784) /locus_tag="CMS_2135" /old_locus_tag="CMS2135" /inference="protein motif:HMMPfam:PF06114" /note="HMMPfam hit to PF06114, Protein of unknown function DUF955, score 1.2e-15" misc_feature complement(2261596..2261625) /locus_tag="CMS_2135" /old_locus_tag="CMS2135" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene 2262390..2263328 /locus_tag="CMS_2136" /old_locus_tag="CMS2136" /db_xref="GeneID:6157779" CDS 2262390..2263328 /locus_tag="CMS_2136" /old_locus_tag="CMS2136" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710823.1" /db_xref="GI:170782490" /db_xref="GeneID:6157779" /translation="MSTDAHAPRPLSEHRPEDAEDLTIEVPAARLSAVRVPARTGDPA TAPVALLVPGFTGSKEDFLPVMGPLADRGFTVVAFSQRGQWGSTGPGQAEPPVDATGY ELETLGQDVHHVVDALAGVGGPGGRHVAADTERVAPLGPVHLLGHSFGDVVGMQAVIR DPGRFASYTHWNSGPRSRGERAEQIDAVRASGSAGLWPLWFLPEQLDGDDPEVAWFRT RLFGTASAQLLGALQIMQAQTDRVDELRATGIPVLVSHGDADDAWPQDWQRDMAERAG ARYEVVADAGHSAQVDQPEASADLLADFWRSTVPTA" misc_feature 2262609..2263298 /locus_tag="CMS_2136" /old_locus_tag="CMS2136" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 6e-06" gene complement(2263355..2263783) /locus_tag="CMS_2137" /old_locus_tag="CMS2137" /db_xref="GeneID:6157780" CDS complement(2263355..2263783) /locus_tag="CMS_2137" /old_locus_tag="CMS2137" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710824.1" /db_xref="GI:170782491" /db_xref="GeneID:6157780" /translation="MLCIVYSSTAERSFDDMDLAQLLAQSRATNAAHGLTGLLVHRQG RFLQLIEGEDADVRERMEAILADDRHGRISTLMEERITERQFPDWTMGMAKYDARVAE RIPGYRDTFDDLEGERPDDAIRPALRELIRWFQEDTGRLS" misc_feature complement(2263505..2263783) /locus_tag="CMS_2137" /old_locus_tag="CMS2137" /inference="protein motif:HMMPfam:PF04940" /note="HMMPfam hit to PF04940, BLUF, score 4.4e-19" gene 2263940..2264476 /locus_tag="CMS_2138" /old_locus_tag="CMS2138" /db_xref="GeneID:6157781" CDS 2263940..2264476 /locus_tag="CMS_2138" /old_locus_tag="CMS2138" /codon_start=1 /transl_table=11 /product="putative ATP/GTP binding protein" /protein_id="YP_001710825.1" /db_xref="GI:170782492" /db_xref="GeneID:6157781" /translation="MIIWLNGTHGVGKTTTAGLVQERIPDSRLLDAEKVGEVLMDIRP PLPQLDDFQHWTPWRPLVVETARRVLEYTGGTLVMPMTVLVEAYWREISGGLAAHGIP IRHFVLHTDTDTLRDRIQHDPDVGPSAFRFSRVEPYAEAARTWLHAEAEVVDTTRITP EQAADRIATAVLAGVPGA" misc_feature 2263958..2263981 /locus_tag="CMS_2138" /old_locus_tag="CMS2138" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2264483..2264851) /locus_tag="CMS_2139" /old_locus_tag="CMS2139" /db_xref="GeneID:6157782" CDS complement(2264483..2264851) /locus_tag="CMS_2139" /old_locus_tag="CMS2139" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710826.1" /db_xref="GI:170782493" /db_xref="GeneID:6157782" /translation="MPVTGPDFISLQVTDLDASRVFYERYLGLVRSPAGPPHAVVFTT TPIAFALRDMVPGTDIAGTPQPGIGAAIWLHATDVQAIHDALVADGHRIVTAPFDGPF GRTFTFADPDGYHVTLHDRA" misc_feature complement(2264498..2264839) /locus_tag="CMS_2139" /old_locus_tag="CMS2139" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 4.6e-09" gene 2264913..2265365 /locus_tag="CMS_2140" /old_locus_tag="CMS2140" /db_xref="GeneID:6157783" CDS 2264913..2265365 /locus_tag="CMS_2140" /old_locus_tag="CMS2140" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001710827.1" /db_xref="GI:170782494" /db_xref="GeneID:6157783" /translation="MSQGDDGIDLPTSLGYLLKEAASALRQAMEEALRPLGMTITHYS CLELLAQRPGSSNSDLARGAFVTRQSMNVLLQTLERDGSVTRPAEEAVGRVQPTRLTA KGRRDLAKASAAVRAVELRMLGDLSDADREAATRILRGMVRSLRDGGE" misc_feature 2265024..2265335 /locus_tag="CMS_2140" /old_locus_tag="CMS2140" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 4.6e-11" gene complement(2265378..2265554) /locus_tag="CMS_2141" /old_locus_tag="CMS2141" /pseudo /db_xref="GeneID:6157784" gene complement(2265599..2266888) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /db_xref="GeneID:6157785" CDS complement(2265599..2266888) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /EC_number="6.3.4.4" /note="catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /protein_id="YP_001710828.1" /db_xref="GI:170782495" /db_xref="GeneID:6157785" /translation="MPAVVIIGAQWGDEGKGRATDLLGSRVDYVVKFNGGNNAGHTVV VGDEKYALHLLPSGILTPGVVPVIGNGVVVDIEVLFHELDALAARGVDVSKLRVSANA HVITHYHRTIDKVTERFLGKRQIGTTGRGIGPTYADKINRVGIRIQDLFDENILRQKV EAALDAKNHMLVKIYNRRAISAEEIVESLLSYVERLRPMVGDASLELNAALDEGKTVL FEAGQATMLDIDHGTYPFVTSSSATSGGAATGSGVAPNRLERIIAVVKAYTTRVGAGP FPTELHDESGEYLRAKGFEFGTTTGRPRRCGWYDAPIARYTARINGVTDFVLTKLDVL SGLATIPVCVAYDVDGVRHDEVPVSQSDFHHATPIYEEFPGWQEDITGCRRFEDLPKN AQDYVTAIERMSGARISAIGVGPEREQVVVLHDLLEA" misc_feature complement(2265623..2266882) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /inference="protein motif:HMMPfam:PF00709" /note="HMMPfam hit to PF00709, Adenylosuccinate synthetase, score 5.4e-213" misc_feature complement(2266241..2266264) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2266463..2266498) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /note="PS00513 Adenylosuccinate synthetase active site." misc_feature complement(2266838..2266861) /gene="purA" /locus_tag="CMS_2142" /old_locus_tag="CMS2142" /note="PS01266 Adenylosuccinate synthetase GTP-binding site." gene complement(2266970..2267512) /locus_tag="CMS_2143" /old_locus_tag="CMS2143" /db_xref="GeneID:6158895" CDS complement(2266970..2267512) /locus_tag="CMS_2143" /old_locus_tag="CMS2143" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710829.1" /db_xref="GI:170782496" /db_xref="GeneID:6158895" /translation="MAGPVGIARARESRDTLAVGSSVTGENLLGVPETRLADEPEVAA RIQDADGHHDTLGAIAADHPQSSLVWALLSDSAYVQGDRIASYAFARVGYHRGLDSLR KSGWKGQGPVPWSHEPNRGVLRSLYALRRAAAAIGEEEEVSRLSAFLRDADPTAAGHI EAATAGALPPTEAIVIRGQD" gene 2267570..2268748 /locus_tag="CMS_2144" /old_locus_tag="CMS2144" /db_xref="GeneID:6157786" CDS 2267570..2268748 /locus_tag="CMS_2144" /old_locus_tag="CMS2144" /codon_start=1 /transl_table=11 /product="putative nuclease" /protein_id="YP_001710830.1" /db_xref="GI:170782497" /db_xref="GeneID:6157786" /translation="MRILHTSDWHLGRTLHGEDLHAHHAAFLDHLVEVVREREVDVVL VAGDVYDRAVPGVPSVRLLGDALARLSALATVIVTPGNHDSAARLGFASALLRDGLRI LASPEALDVPVVIEDAHGPVAIYGVPYLDPEAVRATLAAPGSPPLPRSHEAVLGAAME RVRADAAGRPGARVVVVAHAFVTGAEPSESERDIRVGGFDQVPAVVFAGADYVALGHL HGAQEVRAGSARPRIRTPRIRYSGSPLAFSFGERMQRKSSALVELAADGSTTVELIPA PVPRRLAEVTGTLAEIVDGRHADLADAWLRVHVTDPVHPAHLVARVREALPHALVVLH EPEGRVEGVRSRVVDATTDPLEVAADFVEYATGAAPTEAEALVMRQAYEQALAADRSA" misc_feature 2267570..2268232 /locus_tag="CMS_2144" /old_locus_tag="CMS2144" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 9.3e-21" misc_feature 2267924..2267956 /locus_tag="CMS_2144" /old_locus_tag="CMS2144" /note="PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature." gene 2268748..2271780 /locus_tag="CMS_2145" /old_locus_tag="CMS2145" /db_xref="GeneID:6157787" CDS 2268748..2271780 /locus_tag="CMS_2145" /old_locus_tag="CMS2145" /codon_start=1 /transl_table=11 /product="putative nuclease" /protein_id="YP_001710831.1" /db_xref="GI:170782498" /db_xref="GeneID:6157787" /translation="MDLHRLTLQAIGPFADEHVIDFAELGRSGLFLLEGPTGSGKSTL IDAVVFALYGSLASEGSSRDRLHSHHASPGVEPYVELVFETAAGIHRVRRSPQHQRPK ARGTGTTNQNAAATLVRLSSPDADAGEVVGTSTQEVGTEIQRIVGLTRAQFVQTVVLP QGEFAEFLRSTGEQRRLVLQSLFGTAVYDRTAKQLAEMRTAAKARTDAADARVAEALT GLREATRVDALEVADAPDTVRLLAELADAAEEARTDHERARQDAATALADAERVSRAL DRRRALIAREETVRAEAAEIAGLARRVEEARRAAAVAGPLAARDRADAARVAAEAEDD AARAACRAERTALADATAPALAERRDALVAELTTLADAEARERGLPRRRADVRAAEDA VAAREAAADEAEAALAERPAGRIPLVEARDAAAAAAGGVDAARAAVAEAEATRRRVAE LEELEARITAAREALDARSATATTAVRHEAELRQRKIRGLAGELARELEDDAPCPVCG AVDHPHPAPSAPGHPDDDEIERAAEARARAERTQGDAAAALAAETARHEVAEAALDGI TVEAADAEVAARAARLAEAEAAGGALRAAEAAVVAHDAETERIRTRRDDARAALSGLR ERVIRARELLAEDEAAVRAVHAERDADEGEAGGHEADDADADAPRVAALVADRAAERA VVDRLIALAAARERTAADAAARAAEFAQALADHDFATADGARAAALPPAELEAVARRV AAHEREQAVVAEGLVDPEIATLTGAEHPDPDAARAALDAAQAAARTSAERAARARDRA ERSAEALARHDAARRESARAGDQARAAIRMAEVANAITPENTRGTTLGTYVLLRRFED VVQAANARLRIMSSGRYELEVSEEREATSRSRKTGLALQIRDHVVDRVREPASFSGGE TFYASLALALGLADVVQAEAGGLQLGTLFVDEGFGTLDPETLDAVMSELGRLSSGGRT VGIVSHVEELKQRVADRIEVRRRPDGSSTLTSTVADPV" misc_feature 2268850..2268873 /locus_tag="CMS_2145" /old_locus_tag="CMS2145" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2271842..2272045) /locus_tag="CMS_2146" /old_locus_tag="CMS2146" /db_xref="GeneID:6157788" CDS complement(2271842..2272045) /locus_tag="CMS_2146" /old_locus_tag="CMS2146" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710832.1" /db_xref="GI:170782499" /db_xref="GeneID:6157788" /translation="MTSDRSLAFILLRSCLVMVALGVVTVQTGGGLGVVGVVAFVLAA GLGGGATFYWRRHLAAKRRDPFS" sig_peptide complement(2271842..2271970) /locus_tag="CMS_2146" /old_locus_tag="CMS2146" /note="Signal peptide predicted for CMS2146 by SignalP 2.0 HMM (Signal peptide probability 0.988) with cleavage site probability 0.515 between residues 43 and 44" misc_feature complement(order(2271887..2271955,2271968..2272027)) /locus_tag="CMS_2146" /old_locus_tag="CMS2146" /note="2 probable transmembrane helices predicted for CMS2146 by TMHMM2.0 at aa 7-26 and 31-53" gene 2272405..2273606 /locus_tag="CMS_2148" /old_locus_tag="CMS2148" /pseudo /db_xref="GeneID:6157789" misc_feature 2273301..2273441 /locus_tag="CMS_2148" /old_locus_tag="CMS2148" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 0.00084" /pseudo misc_feature 2273340..2273405 /locus_tag="CMS_2148" /old_locus_tag="CMS2148" /note="Predicted helix-turn-helix motif with score 1042.000, SD 2.74 at aa 19-40, sequence ITPAEAAAAAGISTRVLQLALR" /pseudo misc_feature 2273448..2273585 /locus_tag="CMS_2148" /old_locus_tag="CMS2148" /note="PS00041 Bacterial regulatory proteins, araC family signature." /pseudo misc_feature 2273457..2273600 /locus_tag="CMS_2148" /old_locus_tag="CMS2148" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 0.05" /pseudo gene 2273688..2274380 /locus_tag="CMS_2149" /old_locus_tag="CMS2149" /db_xref="GeneID:6157790" CDS 2273688..2274380 /locus_tag="CMS_2149" /old_locus_tag="CMS2149" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001710833.1" /db_xref="GI:170782500" /db_xref="GeneID:6157790" /translation="MTSLASARAPRKDAATNRQALIDAAVVALDRDPDASLETIAAAA GLSRRAVYGHFATRDDLVREVLQRGARRVVESLEGITHPDSRIHLALIGARLWAEVEQ VRVMARVAVRGPLAREVATELAPLRAELLRVVERGIAAGELRSDIPAPTLARLVEGGA LAVLDEATRSDIGRAEGHSLVLLTSLAICGLDWRAAGELIAATPELREAAPRADEAPA TTTPASTAGAAS" misc_feature 2273748..2273882 /locus_tag="CMS_2149" /old_locus_tag="CMS2149" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 9.1e-08" misc_feature 2273790..2273855 /locus_tag="CMS_2149" /old_locus_tag="CMS2149" /note="Predicted helix-turn-helix motif with score 1387.000, SD 3.91 at aa 35-56, sequence ASLETIAAAAGLSRRAVYGHFA" gene 2274377..2275072 /locus_tag="CMS_2150" /old_locus_tag="CMS2150" /db_xref="GeneID:6157791" CDS 2274377..2275072 /locus_tag="CMS_2150" /old_locus_tag="CMS2150" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710834.1" /db_xref="GI:170782501" /db_xref="GeneID:6157791" /translation="MIVTLTDARVGDGPAPALPAISLSYGGPDPVVAVAETELRPTVL SLVASGRMRIDGGTLALDGDDAPAADADPKAVAARVAERVALVDTPRINEPADDVTLR AVVAEELALAGHRSGRHEVGVILDDQGLSDLARAPFSAVPAVARIRLLTTLAASRAGV EAVVVTSPERHGGAVAEWMRVLRDLARSGTGVLIVTSEAAAEAIRALPAGDAIAAPTT PEPTPSIDGTLDR" gene 2275069..2277174 /locus_tag="CMS_2151" /old_locus_tag="CMS2151" /db_xref="GeneID:6157792" CDS 2275069..2277174 /locus_tag="CMS_2151" /old_locus_tag="CMS2151" /codon_start=1 /transl_table=11 /product="putative ABC transporter" /protein_id="YP_001710835.1" /db_xref="GI:170782502" /db_xref="GeneID:6157792" /translation="MRLIPLVRAELTRLTATTMSKIALVALVLVPVLYGGLYLWANQD PYSNLDKVPAALVVADQGATVDGKPVDYGTDVAKDVLDDASFDWHEVSSAEARTGLED GTYDFTLTIPSGFSAALSSSSGTDPQQARVVMATDDANSYLATTIAQQAGARITKSVA SRVGTEAAGKLLLGLADVRSSLGDAASGAQQLVDGTASARSGADSLADGNGKLATGAD TLSSGLGQLRSGTAQLPAQTQKLASGADQVASGAATLSSGADDLSTGAAALTPGAQQT AAGARKVADGNAQLAALGSTATAGVDQLAGRVPAIRTAIQQRMQDAGIPQADIDAALA KLDVLGTDITGAAGKSDGLNTQLQQLAAGSEQVAQGSAQVADGAGKLQTGSAALATGA GTLATGSRQVADGADALAKASPALADGIAQAADGSATLATGAHSAADGATQLASGLGT LQDGTTKLRDGLDSGLDQIPASTEAQRGAQADTIGDPVALRQDAVTQAGEYGAGLAPF FISLAAWIGIYALFLIVKPLSRRAITARKAPLRITLAGWLTPALLGVVQMAGLYAIVA GALGFRIAHPLAMYGTMVLASITFAAIILALNVLLGSVGQFLGLVLMVVQLVTAGGTF PWQTLPGPLAALHHVLPMSFAVDALRQLMYGGDLGQAAQDAGVLALWLVAGLAVALAG AIRITSHRTLRDLRPSLIG" misc_feature order(2275132..2275191,2276575..2276643,2276704..2276772, 2276800..2276868,2276887..2276955,2277052..2277120) /locus_tag="CMS_2151" /old_locus_tag="CMS2151" /note="6 probable transmembrane helices predicted for CMS2151 by TMHMM2.0 at aa 22-41, 503-525, 546-568,578-600, 607-629 and 662-684" misc_feature 2276614..2277045 /locus_tag="CMS_2151" /old_locus_tag="CMS2151" /inference="protein motif:HMMPfam:PF01061" /note="HMMPfam hit to PF01061, ABC-2, score 0.00084" gene complement(2277194..2277481) /locus_tag="CMS_2152" /old_locus_tag="CMS2152" /db_xref="GeneID:6157793" CDS complement(2277194..2277481) /locus_tag="CMS_2152" /old_locus_tag="CMS2152" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710836.1" /db_xref="GI:170782503" /db_xref="GeneID:6157793" /translation="MSRTGMRVLLAVAVLATAGGAVALVVALAQPVVIGSFASVGPGN PFRGSGVHFLTTTAVVGGVVLVAGLAGLALALGIRLGERARLDGRPPSADR" sig_peptide complement(2277194..2277307) /locus_tag="CMS_2152" /old_locus_tag="CMS2152" /note="Signal peptide predicted for CMS2152 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.753 between residues 38 and 39" misc_feature complement(order(2277254..2277322,2277380..2277448)) /locus_tag="CMS_2152" /old_locus_tag="CMS2152" /note="2 probable transmembrane helices predicted for CMS2152 by TMHMM2.0 at aa 12-34 and 54-76" gene complement(2277478..2278098) /locus_tag="CMS_2153" /old_locus_tag="CMS2153" /db_xref="GeneID:6157794" CDS complement(2277478..2278098) /locus_tag="CMS_2153" /old_locus_tag="CMS2153" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710837.1" /db_xref="GI:170782504" /db_xref="GeneID:6157794" /translation="MPAWAMRIADFPVPDTAAARGALDLATSYQSEAITAHALRSWLW AEAFAVVEGLADVDHEILYVSAVLHDIGTVAEFDNHTVSYEHAGGHVGVALTAGAGWP ASRRQRVLDAIVRHNWPSVDPELDVEGHLLEVATGLDISGARAHALPEEYLREVLALH PRGHLAAEFGACVVDQAERKPTTAARRLVDGGVVAKLAANPLEALR" gene 2278161..2280083 /locus_tag="CMS_2154" /old_locus_tag="CMS2154" /db_xref="GeneID:6157795" CDS 2278161..2280083 /locus_tag="CMS_2154" /old_locus_tag="CMS2154" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="YP_001710838.1" /db_xref="GI:170782505" /db_xref="GeneID:6157795" /translation="MTQDPTTPPSSALSRRGFLITSGAADALGVAGLGGALPATAATA ADVADSATAKAPAAQQGSGARWKPDTTSPRFTIAVLPDTQYLFDGASIHPEPLEASLR YVLAERDRHNIVFLAHLGDVTQNGAANEIQAASAQFTLLDKAGAAWSVLAGNHDVDSS TDDQRGRTPYLDAFGPKRFRKSPSYRGSSPDGYNSFHTFTAGGRDWLVLALDWRTSAR GVEWARGVLAAHPTLPVILTAHDIVDSKPDGSAVLDDYGQGLWDSFISQHDQIFLTLN GHYWKPGRTTMQNRAGHDVAMHLVNYQDRYYGGAAMIRLYHVDLERNAIDVETLSPFI LGGGLGTGNELADEEAFLSGDVDRFTVSVDFEARFAGFAPVPARPARPASQMLVAGTV AYWRFDGHADGSALGTATRIPDASGRGNDLVVANRAGAAAGSLRFASAHHDDQPGFGS LTLTGGKESGDYLRTVPGAPLDAATFRQGYTVEAFVRIPADFDGDADGFSAILSRAAS AKDAGRTPGDAGDPDEPAATLSVSGSREIQWCVYPTTQQGSLTNWSHELPPARWWHVA VVNDGQHTTMYVDGCPVVRNPSTGNRGLAAASPATSWLLGANLYAGKLDHVLPASIGD VRIVERALKPSEFMIA" sig_peptide 2278161..2278292 /locus_tag="CMS_2154" /old_locus_tag="CMS2154" /note="Signal peptide predicted for CMS2154 by SignalP 2.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.574 between residues 44 and 45" gene 2280219..2280455 /locus_tag="CMS_2155" /old_locus_tag="CMS2155" /db_xref="GeneID:6157796" CDS 2280219..2280455 /locus_tag="CMS_2155" /old_locus_tag="CMS2155" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001710839.1" /db_xref="GI:170782506" /db_xref="GeneID:6157796" /translation="MRTAAITDPTTLGLVLREARLQRGMTQRELAAVLDVRQSYIAEM ELGKSIKALERLFDFARETGLTLSADLVDDPDAR" misc_feature 2280264..2280428 /locus_tag="CMS_2155" /old_locus_tag="CMS2155" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 2.9e-11" misc_feature 2280342..2280365 /locus_tag="CMS_2155" /old_locus_tag="CMS2155" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2280455..2281759 /locus_tag="CMS_2156" /old_locus_tag="CMS2156" /db_xref="GeneID:6157797" CDS 2280455..2281759 /locus_tag="CMS_2156" /old_locus_tag="CMS2156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710840.1" /db_xref="GI:170782507" /db_xref="GeneID:6157797" /translation="MRLAVELYGERLGELIERRGGFDFVADPQAVAAHGIGSRLLSVA VPLITRARPADAALRRNFFDELLPEGRARTSLAGRAGVTADYTIGMLARYGRDVAGAL RIWDPEGPDEPRKPEAVPIDNLGVEKSMKAVRAAPLGNSTARRMSSLAGVQDKIVLAR TASGWAEPLDGFPSTHIIKPILMTMPTLIFDEEYGARIARHLGLLDYATEIRMFGRTS ALVIERYDRDPGSPDGRIHQEDFNQALGMSGDGKYEDDGHPGLAAIARVVRQADTGSL ARLAQMMTLSAAVGNLDMHAKNLSLLHRPDGSMTLAPAYDIVPQLHQDVDPVIALHVD GVRQHRDLRAVHLIAEARSWGLRGADELVRTTIAEISGFVATEEPDAGAAPDLARSIS ALCAQLLDDAPSSTPDAGTDEGDPPLRYLPESPGGWGGPVRR" gene complement(2281786..2282280) /locus_tag="CMS_2157" /old_locus_tag="CMS2157" /db_xref="GeneID:6157798" CDS complement(2281786..2282280) /locus_tag="CMS_2157" /old_locus_tag="CMS2157" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710841.1" /db_xref="GI:170782508" /db_xref="GeneID:6157798" /translation="MSADPDLFKAAFRGHPAGVALITARTADGPSGLTASSVASLSVD PPALSFSVTRATGSAGAILGADTYLVHLLAGQHAALARAFAVSGSPRFTEEQGFQELP TGEPLLADARAALRCRTIQTVPVGGSVLVVAEVLDVILGEPAPPLVYRDRRFHLLEDD HPEL" misc_feature complement(2281807..2282247) /locus_tag="CMS_2157" /old_locus_tag="CMS2157" /inference="protein motif:HMMPfam:PF01613" /note="HMMPfam hit to PF01613, Flavin reductase-like,score 2.1e-31" gene complement(2282277..2282603) /locus_tag="CMS_2158" /old_locus_tag="CMS2158" /db_xref="GeneID:6157799" CDS complement(2282277..2282603) /locus_tag="CMS_2158" /old_locus_tag="CMS2158" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_001710842.1" /db_xref="GI:170782509" /db_xref="GeneID:6157799" /translation="MTCVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCG ACEPVCPVEAIYYEDDLPEKWSDYYTANVEFFAEMGSPGGAVKVGTVAYDHPVVAAVP RQGEPA" misc_feature complement(2282436..2282507) /locus_tag="CMS_2158" /old_locus_tag="CMS2158" /inference="protein motif:HMMPfam:PF00037" /note="HMMPfam hit to PF00037, 4Fe-4S ferredoxin,iron-sulfur binding, score 3.8e-08" misc_feature complement(2282451..2282486) /locus_tag="CMS_2158" /old_locus_tag="CMS2158" /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature." gene 2282710..2283180 /locus_tag="CMS_2159" /old_locus_tag="CMS2159" /db_xref="GeneID:6157800" CDS 2282710..2283180 /locus_tag="CMS_2159" /old_locus_tag="CMS2159" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001710843.1" /db_xref="GI:170782510" /db_xref="GeneID:6157800" /translation="MADAQAGPRHAPGEQLTVGEMTRRTGVAASALRFYEDLGLIAAE RTAGNQRRYARHMLRRVSLITVAKRLGIPLADVQSTFDDVPLDRPPSHADWQRASRRW KRLLEERRRGIERLERELTGCIGCGCLSMKACGLLNPDDALGDRGAGPRRVQLD" misc_feature 2282773..2282868 /locus_tag="CMS_2159" /old_locus_tag="CMS2159" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 5.6e-06" gene complement(2283210..2284172) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /db_xref="GeneID:6157801" CDS complement(2283210..2284172) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710844.1" /db_xref="GI:170782511" /db_xref="GeneID:6157801" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2283222..2283764) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.9e-38" misc_feature complement(2283849..2283914) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2283914..2284035) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2284035..2284100) /locus_tag="CMS_2160" /old_locus_tag="CMS2160" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2284270..2286555) /gene="deaD" /locus_tag="CMS_2161" /old_locus_tag="CMS2161" /db_xref="GeneID:6157802" CDS complement(2284270..2286555) /gene="deaD" /locus_tag="CMS_2161" /old_locus_tag="CMS2161" /note="Repetetive N-terminal region may not be encoded" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase" /protein_id="YP_001710845.1" /db_xref="GI:170782512" /db_xref="GeneID:6157802" /translation="MPYNNDSPRGAKRAPAGSRSPNHRGYNSDPAPKKQRWNADERAQ RSGQDDRPQRGGAARPARGGDRPNWEPRAERPAGRGERPAYGDRPNRAGQRPERGDAR PQRGERPSYGGGNDRGQRSERPSYGAERGQRSERPSYGNARPARDERSERPSYNDRAP RNDRPSYGNDRPQRSERPSCDDRPARSERPSHNDRAERPSYGDRAQRSERPAYNDRAE RPSYNDRNTRTERPAYSDRPARAERPSYNDSRPARTERPSYGDRAERTERPSYNDRPA RTERPSYNDRPARTERPSYNDRPARTERPSYGDRPQRSERPSYGDRPQRSERPSYDDA RPKRDSDFYPSKEGAPRHAPAEDVVLERLEAQATTAKDVDGVTFAALGLGQNIVRVLE ELGASSPFPIQAATIPDVLAGRDVLGRGRTGSGKTIAFGAPLVERLLENDGAKNRKMG RKPRALILAPTRELAMQIDRTVQPIARSVGLFTTTIFGGVPQFKQVGALQRGVDILIA TPGRLEDLIDQGRLDLSEIVVTVLDEADHMCDLGFLEPVQRILRQVKKDGQRLLFSAT LDKGVATLVNEFLPSPSVHEVAGEDQASSTIDHRVLLIEQRDKAAIIEQLSSGEGKTL IFARTRAFAEQLADQLEDAGIPATSLHGDLNQARRTRNLQLLTSGKVRVLVATDVAAR GIHVDDIGLVIQADAPDEYKSYLHRAGRTGRAGKQGTVVTLITKARRRRMDDLLGRAE IKATTVMAAAGDRVIADLARV" misc_feature complement(2284411..2284641) /gene="deaD" /locus_tag="CMS_2161" /old_locus_tag="CMS2161" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 3.5e-29" misc_feature complement(2284834..2285361) /gene="deaD" /locus_tag="CMS_2161" /old_locus_tag="CMS2161" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 1.2e-51" misc_feature complement(2285275..2285298) /gene="deaD" /locus_tag="CMS_2161" /old_locus_tag="CMS2161" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2286855..2290209) /locus_tag="CMS_2162" /old_locus_tag="CMS2162" /pseudo /db_xref="GeneID:6158659" misc_feature complement(2286961..2290104) /locus_tag="CMS_2162" /old_locus_tag="CMS2162" /inference="protein motif:HMMPfam:PF00873" /note="HMMPfam hit to PF00873, Acriflavin resistance protein, score 1.2e-208" /pseudo misc_feature complement(order(2288647..2288715,2288758..2288826, 2288941..2289009,2289037..2289105,2290024..2290077)) /locus_tag="CMS_2162" /old_locus_tag="CMS2162" /note="5 probable transmembrane helices predicted for CMS2163 by TMHMM2.0 at aa 45-62, 369-391, 401-423, 462-484 and 499-521" /pseudo gene 2290301..2290699 /locus_tag="CMS_2164" /old_locus_tag="CMS2164" /db_xref="GeneID:6157803" CDS 2290301..2290699 /locus_tag="CMS_2164" /old_locus_tag="CMS2164" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710846.1" /db_xref="GI:170782513" /db_xref="GeneID:6157803" /translation="MAHRASSTRDSVPAPKTCASCGRTIEWRKKWERDWDEVRYCSDA CRRRGVTDVDERLERRILDLLAHRAGGATICPSEAARAESPDEWRDLMEPARRAARRL VEAGEVEITQKGSVVDPSTAKGPIRIRRRR" gene 2290717..2291115 /locus_tag="CMS_2165" /old_locus_tag="CMS2165" /db_xref="GeneID:6157804" CDS 2290717..2291115 /locus_tag="CMS_2165" /old_locus_tag="CMS2165" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710847.1" /db_xref="GI:170782514" /db_xref="GeneID:6157804" /translation="MHRPTLTVLTAVASAALLSGCGASAQFTSPTTEIYATTADAQTA LATAMPTWIPADGTLIRTKSEAKAGSIVAVQTGQAAPAPGGCTDLQMPTIEDTWWPPE IDPATVTCADGWNVFGANGRLYGWSTTVLP" sig_peptide 2290717..2290824 /locus_tag="CMS_2165" /old_locus_tag="CMS2165" /note="Signal peptide predicted for CMS2165 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.469 between residues 36 and 37" misc_feature 2290747..2290779 /locus_tag="CMS_2165" /old_locus_tag="CMS2165" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2291112..2292191) /locus_tag="CMS_2166" /old_locus_tag="CMS2166" /db_xref="GeneID:6157805" CDS complement(2291112..2292191) /locus_tag="CMS_2166" /old_locus_tag="CMS2166" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710848.1" /db_xref="GI:170782515" /db_xref="GeneID:6157805" /translation="MTSSPIPRPPSTRTLGLEAAMRASVGLLVPLVVLLAIDRLDLAL YASFGVFTGLYGRNERYRLRLASVGAGAAMMLVAISTGVLLSLADAPLALEAVGLVIV LGGASLVSTAMSLVPPHPLFPVFGLVVCAAVPVDPSQARDALLTAVAAILFSAGVCMS GWLLRRWAPDTQAHRFRALPRIPVRDAAVHRDPAAWTAVVANVVGALVAGAIAVALGL GHHYWAVVTLVAVLPVVRGPLSFTRVAHRVLGTLAGSVVAAGILALHLPAPAVIAVAV ACQFAAEIAVGRHYGLALVFITPLALVMGGLGRPLPVLPLVADRVVDTGVGAAVGVVV ILVLRALAARRRRRAGAASGGTATA" misc_feature complement(order(2291163..2291231,2291274..2291342, 2291361..2291429,2291541..2291609,2291697..2291765, 2291844..2291912,2291931..2291999,2292027..2292095)) /locus_tag="CMS_2166" /old_locus_tag="CMS2166" /note="8 probable transmembrane helices predicted for CMS2166 by TMHMM2.0 at aa 13-35, 45-67, 74-96, 123-145,175-197, 235-257, 264-286 and 301-323" gene complement(2292332..2293294) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /db_xref="GeneID:6157806" CDS complement(2292332..2293294) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710849.1" /db_xref="GI:170782516" /db_xref="GeneID:6157806" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2292344..2292886) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(2292971..2293036) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2293036..2293157) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2293157..2293222) /locus_tag="CMS_2167" /old_locus_tag="CMS2167" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2293392..2294438) /locus_tag="CMS_2168" /old_locus_tag="CMS2168" /db_xref="GeneID:6157807" CDS complement(2293392..2294438) /locus_tag="CMS_2168" /old_locus_tag="CMS2168" /codon_start=1 /transl_table=11 /product="LysR family trancsriptional regulator" /protein_id="YP_001710850.1" /db_xref="GI:170782517" /db_xref="GeneID:6157807" /translation="MRAIEGTPVDADPTALRRFAAVADELHFARAAKALNVSRIAVSR SILDLEALWGVELFVRDDGPTRLSPAGEARLAEARAAIAAEDARLAEEAAAPPRGLVV AIVPGVTVAKWTRAWDERVADVPLRVVPLAEPDAAPALVDQSADVAFLRLPVDGRGLT IVPLYGEVQVAILPKEHAHATADAIAITDLADDLLLQPADQVPGWPGRTAGADPVPMP EDVAAAVELVAAGVGFVVVPHALGRLHARKDVVAVPVHDLPETRIAVAWREGDVSPDI EELVGIVRGRTAASSRSSRDEDERDRRKPTAAQKTARKAAGKPGGAGGKGGSKPAPKG GGRTPPPRGQRRGR" misc_feature complement(2293575..2294162) /locus_tag="CMS_2168" /old_locus_tag="CMS2168" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 1.8e-09" misc_feature complement(2294223..2294393) /locus_tag="CMS_2168" /old_locus_tag="CMS2168" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 1e-10" misc_feature complement(2294298..2294363) /locus_tag="CMS_2168" /old_locus_tag="CMS2168" /note="Predicted helix-turn-helix motif with score 1383.000, SD 3.90 at aa 26-47, sequence LHFARAAKALNVSRIAVSRSIL" gene 2294517..2294948 /locus_tag="CMS_2169" /old_locus_tag="CMS2169" /db_xref="GeneID:6157808" CDS 2294517..2294948 /locus_tag="CMS_2169" /old_locus_tag="CMS2169" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710851.1" /db_xref="GI:170782518" /db_xref="GeneID:6157808" /translation="MTSPGSSQTMKAATAAKKLGVHLPATPVEFQESTPSRAELAEMH ENPPEWLATLLRDGPHPRQVIAGKLGVSIAGLARGGVDEALTTAQIKELLQAPPQWLV QERATQAEVREEQIRVKNRDAGRAAMAAERERQDGAGGSRR" gene 2295058..2296536 /locus_tag="CMS_2170" /old_locus_tag="CMS2170" /db_xref="GeneID:6157809" CDS 2295058..2296536 /locus_tag="CMS_2170" /old_locus_tag="CMS2170" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710852.1" /db_xref="GI:170782519" /db_xref="GeneID:6157809" /translation="MTRTNDTARRRHAAAATEPDPAAAVPAPITGSRVPGTVGVVVVA ALVTAVYVLYSALQWRRFTVKSWDTGIFTQLAQDYSRLQAPLVSIKGDGFNLMGDHFH PILVLLGPVYAVWPHAFALLVVQAVLIGISVVGVGRLAGRVVGRWGAIVVAAAYGLSW GIQGAVAFQFHEIAFALPLLAFALDAVIARRAMAAAAWAVPLVFVKEDLGLTVAVLGA IIALTMDRRIGVALAGWGVAWFVLATTVILPAFNREARWDYASKLDAGGALADPLGTV AGLFVAPKLETVAFLILAGALIAVRSPLLLLVVPTLAWRFLAPTEAYWAPGYHYDAVL MPIVFAAAIDGVVRARAGRQRWLRSASRLAVPALAVAAIAVAAIALFFRSPMVDLTKP TIWEPAPRAAQAQAALDQVPAGASVLSDIGLMSYLVDDHEVYWLGNPGNPAPQYVVID TLGGGLGQGALNADQYGEATQAGTTYEIVYADAGYQVARRIQ" misc_feature order(2295169..2295237,2295397..2295465,2295484..2295543, 2295556..2295624,2295661..2295729,2295739..2295807, 2295919..2295987,2296030..2296098,2296135..2296203) /locus_tag="CMS_2170" /old_locus_tag="CMS2170" /note="9 probable transmembrane helices predicted for CMS2170 by TMHMM2.0 at aa 5-27, 81-103, 110-129, 134-156,169-191, 195-217, 255-277, 292-314 and 327-349" gene complement(2296633..2298135) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /db_xref="GeneID:6157810" CDS complement(2296633..2298135) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710853.1" /db_xref="GI:170782520" /db_xref="GeneID:6157810" /translation="MVFSRASRPPTKESHVLVFLGFAMVLTFMALIMTKRLTPMVALI LVPTIFGLFAGAGLGIGDMVIEALGDLAPTAALLMFAIIYFGIMIDVGLFDPLVRLIL RLAGGDPAKIVLGTAILAAAVSLDGDGSTTFIVTTAAMLPIYRKLGMSPVVLTCTAGL ANGTLNIVPWGGPTVRAAAALKVSPTDIFVPMIPSLLVGIALVMSFAWTMGLRERSRL AALGEARAEGGLDAASASGSGAGVGGSTGGSGWWRAGRGAPATPRGGLITMAPALVRA ETAAVSTLGTTMLDPDRETLRPRMIWFNLGLTIVVLALLIMDQLPLAYVFMVGAAIAL IANFRDLKHQGERIAAHAPSVVGVVSMVLAAGVLIGVLNGTGMVSAMSAWLVTIIPDA LGPGLAVITGVLSIPMTFFMSNDAFYYGMLPVLAESAANYGIDPVEMARASITGQPVH LQSPLVPAILLLVSLADVNLGDHHRKVLWRAVLVSLTMLAVGVLTAVIPI" sig_peptide complement(2296633..2296740) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /note="Signal peptide predicted for CMS2171 by SignalP 2.0 HMM (Signal peptide probability 0.776) with cleavage site probability 0.360 between residues 36 and 37" misc_feature complement(order(2296639..2296707,2296894..2296962, 2297020..2297088,2297122..2297175,2297185..2297238, 2297506..2297574,2297617..2297685,2297857..2297925, 2297953..2298021,2298040..2298093)) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /note="10 probable transmembrane helices predicted for CMS2171 by TMHMM2.0 at aa 15-32, 39-61, 71-93, 151-173,188-210, 300-317, 321-338, 350-372, 392-414 and 477-499" misc_feature complement(2296786..2298078) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /inference="protein motif:HMMPfam:PF03600" /note="HMMPfam hit to PF03600, Citrate transporter, score 1.2e-146" misc_feature complement(2297782..2297826) /locus_tag="CMS_2171" /old_locus_tag="CMS2171" /note="PS00211 ABC transporters family signature." gene 2298226..2300163 /locus_tag="CMS_2172" /old_locus_tag="CMS2172" /db_xref="GeneID:6157811" CDS 2298226..2300163 /locus_tag="CMS_2172" /old_locus_tag="CMS2172" /codon_start=1 /transl_table=11 /product="putative two component system sensor kinase" /protein_id="YP_001710854.1" /db_xref="GI:170782521" /db_xref="GeneID:6157811" /translation="MDRATGRRRAGLDFARRTLVLQLLVVLVVVGIATVAYGLLSSSE NREEAQATALAIARTAAEDPALRAAVTAETADPATATSADLADGPVQRTAEAVRERTG ALFVVVTDDRGLRLAHPDPAELGQRVSTDPAAALSGREEVTWATGTLGESARAKVPVR ALADASAGGDDDGAAGSASSRVVGEVSVGFAAATVRDSIGVDVAAIAVVALLALGVGA VASGILSRRLARLTLGLQPSELAGLVQDQAAVLSGVGEGVLGIGPDGRVTVCNPRAAA LLGLEDPVGRTLADLDVAPVLRDAVAEAQAGAAAGSPSLRAVVDDRLLFVDVARVDRD GRDLGTVMVLRDETDIEAMSRRLTAVTAMSTALRVQRHEFANRLHVVRGLVATGRVDE ADSYLAGVLEQGPVAFPTVDAGLVDEPYLQAFLGAKAMEAEERGVALRVGPGTLVRGI LVRPEEVTTVLGNLVDNAVHAAVRGSRADRWVEVEALDDGVDLHLAVSDSGDGLAASD AGRVFRRRPDDVGAVAEALAAEEDAAADGPAADALAADAPVAGGAGDRGGADPAHGLG FGLPLVRDIARRDGGDVWVADPGGPPPHAEAGAVFCARLAGVVEPPDADPPTADDADA PADPDPDPDRPDTRDPDGAPA" misc_feature order(2298277..2298345,2298832..2298900) /locus_tag="CMS_2172" /old_locus_tag="CMS2172" /note="2 probable transmembrane helices predicted for CMS2172 by TMHMM2.0 at aa 37-59 and 222-244" misc_feature 2299579..2300049 /locus_tag="CMS_2172" /old_locus_tag="CMS2172" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 2.2e-08" gene 2300160..2300825 /locus_tag="CMS_2173" /old_locus_tag="CMS2173" /db_xref="GeneID:6157812" CDS 2300160..2300825 /locus_tag="CMS_2173" /old_locus_tag="CMS2173" /codon_start=1 /transl_table=11 /product="putative two-component response regulator" /protein_id="YP_001710855.1" /db_xref="GI:170782522" /db_xref="GeneID:6157812" /translation="MTDDLTVLIVDDDFRIARLHEGIVEQAPGFRAVGTAGSVRAALA VLDTSRPDLVLLDAYLPDGSGIDLVRRIEPDVILVTAADDPATVRRALRGGAVSYLVK PFAPELLTARLAAYAAFRAGLASDRPLDQAGIDRAIHALRPGRASAQARPATEQAVLD ALSASDAELSAPEIAERVGVSRATAQRYLGALARDRVVDVQLNYGSTGRPEHRYRILR PRG" misc_feature 2300172..2300522 /locus_tag="CMS_2173" /old_locus_tag="CMS2173" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 3e-28" misc_feature 2300664..2300729 /locus_tag="CMS_2173" /old_locus_tag="CMS2173" /note="Predicted helix-turn-helix motif with score 1658.000, SD 4.83 at aa 169-190, sequence LSAPEIAERVGVSRATAQRYLG" gene 2300872..2301219 /locus_tag="CMS_2174" /old_locus_tag="CMS2174" /db_xref="GeneID:6157813" CDS 2300872..2301219 /locus_tag="CMS_2174" /old_locus_tag="CMS2174" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710856.1" /db_xref="GI:170782523" /db_xref="GeneID:6157813" /translation="MSDAGAQVIHFHRKHHDVIVSGEKATTVRWGEDLRVGPATFVFD EHATAVPLAGRVTSVRRHLLADLTPEDAHQPPGTDMARFAEQLRENYYPTMPASAAVV VAEIELGGVAPVG" gene complement(2301574..2301963) /locus_tag="CMS_2175" /old_locus_tag="CMS2175" /db_xref="GeneID:6157814" CDS complement(2301574..2301963) /locus_tag="CMS_2175" /old_locus_tag="CMS2175" /codon_start=1 /transl_table=11 /product="putative NUDIX hydrolase" /protein_id="YP_001710857.1" /db_xref="GI:170782524" /db_xref="GeneID:6157814" /translation="MEHRVACGLLVRSAHVLLAHRSATKAWYPHVWDFPGGHLEPGES SLHALVRELREELDVKIDPPAGGPIRVLKMADARIEIWQIVSWAGVITNAAPEEHDAV GWFTAEEAAGLDLADARYPQLIRDALI" misc_feature complement(2301586..2301960) /locus_tag="CMS_2175" /old_locus_tag="CMS2175" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 2.7e-18" misc_feature complement(2301796..2301855) /locus_tag="CMS_2175" /old_locus_tag="CMS2175" /note="PS00893 mutT domain signature." gene complement(2301981..2303316) /locus_tag="CMS_2176" /old_locus_tag="CMS2176" /pseudo /db_xref="GeneID:6157815" misc_feature complement(2302051..2303268) /locus_tag="CMS_2176" /old_locus_tag="CMS2176" /inference="protein motif:HMMPfam:PF00202" /note="HMMPfam hit to PF00202, Aminotransferase class-III,score 1.3e-66" /pseudo gene 2303467..2304372 /locus_tag="CMS_2177" /old_locus_tag="CMS2177" /db_xref="GeneID:6157816" CDS 2303467..2304372 /locus_tag="CMS_2177" /old_locus_tag="CMS2177" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710858.1" /db_xref="GI:170782525" /db_xref="GeneID:6157816" /translation="MAASGDVDPLRAPGTAMIRVGDRDVRHRVTGTGDPLLLLHGIGR SLEDWEEQHDRLSAGHALHSLDLPGSGWSDPVDGGTTLESIADALPAYLDAAGVRGPV TVVGNSLGGAVAMTLATRHPDRVRALVLADSAGFGRQVTVGLRMLAFDPLATLLMRPT PGNSRRSTRTIFHDPALTTDERVRHAQALSARPAHAATMLDIARDLGTVRGVSSRWRR PLVEGVRASGLPVLALWGDRDRILPPGHLAAVARELPDALTRMIPDCGHMPQIERPDL FAELVGDFLGSLPPAAAARAAPREP" misc_feature 2303644..2304315 /locus_tag="CMS_2177" /old_locus_tag="CMS2177" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 1.2e-32" gene 2304518..2306041 /gene="peh" /locus_tag="CMS_2178" /old_locus_tag="CMS2178" /db_xref="GeneID:6157817" CDS 2304518..2306041 /gene="peh" /locus_tag="CMS_2178" /old_locus_tag="CMS2178" /EC_number="3.2.1.15" /codon_start=1 /transl_table=11 /product="endo-polygalacturonase" /protein_id="YP_001710859.1" /db_xref="GI:170782526" /db_xref="GeneID:6157817" /translation="MRRHVTLLLPALLLAACLAGHPQPAQANEVARPGAVLPPTAPWA ATPRVDRASEAGDPLTASLVEAVGDRRHPSAPRPPSTTCATIPAQLSMPGRTASAAEE ASPPDTARIQRGLDACAGTGGAVRLSTSGAATDFLSGPLVVRPGEVLLVDPAATLFAS RNAAAYQVAGHGRCGTIGGDGLGCAPFLAVGSGSGVESTRAADGTQGRIDGRGDATLL GSATTWWALSAQAKAGGNQNVPRLIKAQRSNDVTVADVDLIDSPGQHISFNDGVGLTV WGVVVFTPANARNTDGIDPAGAQDVTIADSYIMDGDDGIAIKASDAPSAHITIRGNTL TGTHGISLGRQTTAGISDVLIDGNTISGKDRYGNQSVAAGGIRIKSSAAAGGLVRDIT FRDTCIDLVKAPVVFDSRYESGSGTHIPSFTGIVVDGLRATNSVKGAASVLEGFDAAH PLGLLLRRVDVDDPDVRAAYADITTQGAHFGGVPLTASGAGVRVTAQADAGAAPACG" misc_feature 2304869..2305954 /gene="peh" /locus_tag="CMS_2178" /old_locus_tag="CMS2178" /inference="protein motif:HMMPfam:PF00295" /note="HMMPfam hit to PF00295, Glycoside hydrolase, family 28, score 5.2e-14" gene complement(2306114..2307367) /locus_tag="CMS_2179" /old_locus_tag="CMS2179" /db_xref="GeneID:6158856" CDS complement(2306114..2307367) /locus_tag="CMS_2179" /old_locus_tag="CMS2179" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710860.1" /db_xref="GI:170782527" /db_xref="GeneID:6158856" /translation="MPAPVPVRGTRGGDAHRAKFTPRRRRTPSLLATTHPLLDTIWES RPPRGTGVARGQAPIRASRGTDRGAYMPTPRQLSTALLVTAAAVSASCLVVPAIAATA SGGTSVRGVARARLRAARRAPRHGDPAGRVAAADARCRHAAPGRAHHRPGHRHDRHHG RRGDRDVPGHLCGLPVQARADFQRAVDVWSHVISSPVPITVSARYEHLGAGIGGQAGP STYRTDFRGAPRPHTFYAEPLANKLAGHQIDPSPDIEAEFDSDASHTHFGTGPIGPDQ VDFASAVLHELGHGLGFVGAATVEHGRGAMGTPGYPLAFDTYTRAADGRSLLSIADPV QLAAQLQTPGLVFDSPQVRQAGGGKAARLYAPTTWDGSSYSHLDEATYPEGDPDELMT PVLARGHAVPGPGPVTVAVLRTLGW" misc_feature complement(2306495..2306524) /locus_tag="CMS_2179" /old_locus_tag="CMS2179" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene complement(2307410..2308072) /locus_tag="CMS_2180" /old_locus_tag="CMS2180" /db_xref="GeneID:6157818" CDS complement(2307410..2308072) /locus_tag="CMS_2180" /old_locus_tag="CMS2180" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710861.1" /db_xref="GI:170782528" /db_xref="GeneID:6157818" /translation="MADGDDPRRREDSLATRMSDAVSRTSEREVALRAMGLLDGLYEG DDFLLLVGGRHARGILNGAPPLYWPEAWGARALLYAWTPEAAKVVEKNLTNRAWRVRE ACAKVVATRQLPLVRALTVLVTDENARVRGAALRALGAVGGPSDEDVIRRALTDPDTS VRVAAHDGFESLAERHDSVRSPAARHAAAAAEASPPDAPDAPDDAPERDAGADAGADA GS" misc_feature complement(2307545..2307637) /locus_tag="CMS_2180" /old_locus_tag="CMS2180" /inference="protein motif:HMMPfam:PF02985" /note="HMMPfam hit to PF02985, HEAT, score 2.2" misc_feature complement(2307638..2307742) /locus_tag="CMS_2180" /old_locus_tag="CMS2180" /inference="protein motif:HMMPfam:PF02985" /note="HMMPfam hit to PF02985, HEAT, score 0.4" gene complement(2308139..2309248) /locus_tag="CMS_2181" /old_locus_tag="CMS2181" /db_xref="GeneID:6157819" CDS complement(2308139..2309248) /locus_tag="CMS_2181" /old_locus_tag="CMS2181" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710862.1" /db_xref="GI:170782529" /db_xref="GeneID:6157819" /translation="MTSMPPARTPDPTPAQVRRWRQYLADERAEAAVYRDLAGRRTGE ERDILLALAEAEGRHADHWIELLGDSVGKPVRGDIRTRILGLLARRFGSVFVLALAQR AESRSPYADDADATDAMAADERVHEEVVRGLATRGRMRLSGTFRAAVFGANDGLVSNL ALVLGITATGVPNAVILATGLAGLLAGALSMGAGEFVSVRSQRELLEASAPDPGTRDA LPHLDVDANELALVYRARGMTEDEALAHAAEVLRDLAAETRPIPVSIAGVAASEDDHE SVGTAWGAAISSFCFFASGAVIPVLPYLFGLQGLAALAIACVLVAIALSITGAVTGLL SGGPPLRRAGRQLLIGFGAAGATYLLGLLFNTQAG" misc_feature complement(order(2308157..2308210,2308247..2308315, 2308328..2308396,2308670..2308738)) /locus_tag="CMS_2181" /old_locus_tag="CMS2181" /note="4 probable transmembrane helices predicted for CMS2181 by TMHMM2.0 at aa 222-244, 336-358, 363-385 and 398-415" misc_feature complement(2308160..2308819) /locus_tag="CMS_2181" /old_locus_tag="CMS2181" /inference="protein motif:HMMPfam:PF01988" /note="HMMPfam hit to PF01988, Protein of unknown function DUF125, score 3.7e-57" gene complement(2309517..2310386) /locus_tag="CMS_2182" /old_locus_tag="CMS2182" /db_xref="GeneID:6157820" CDS complement(2309517..2310386) /locus_tag="CMS_2182" /old_locus_tag="CMS2182" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710863.1" /db_xref="GI:170782530" /db_xref="GeneID:6157820" /translation="MSDTVRAVLLLECYVTVTLLAPLLLGRLPLVAQRPVAMLAAWHG FLVTAVLSLGSGLGLLIHQGMAMQAGTGPQQDADTAPVAAIPLAYLAAGVLGVLLFRI VEEGGRVVREARRRAGEVATLLLASRPYRVAGRDARLVESDVPLAALSPATGVILLTT EARARLDDDELAAVLEHETAHLEQRHAVAVRIAQVSRAILPALPASQRLALSTTIAIE FIADDHAARVSGPTTVASALRKLDPDGGLSALRADRMDHPRGGHRVALRLLCAVACAL PVLPLVIVLLPSA" misc_feature complement(order(2309529..2309597,2310078..2310146, 2310204..2310272,2310309..2310377)) /locus_tag="CMS_2182" /old_locus_tag="CMS2182" /note="4 probable transmembrane helices predicted for CMS2182 by TMHMM2.0 at aa 4-26, 39-61, 81-103 and 264-286" gene complement(2310454..2310915) /locus_tag="CMS_2183" /old_locus_tag="CMS2183" /db_xref="GeneID:6157821" CDS complement(2310454..2310915) /locus_tag="CMS_2183" /old_locus_tag="CMS2183" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001710864.1" /db_xref="GI:170782531" /db_xref="GeneID:6157821" /translation="MSTPQDLQDPLALDRQVSYSLVVAARSVTALYRPILDPLGLTHP QYLVLLALWARGPRSVKDLSHELQLDSATLSPLLKRLEAMGHVWRVRRATDERVLEIG LTDQGRELREKAVAIPQQIRDRLSMTEEQLEGLKTVLSQVIDNAKALPETI" misc_feature complement(2310490..2310795) /locus_tag="CMS_2183" /old_locus_tag="CMS2183" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 3.5e-19" gene complement(2311040..2311741) /locus_tag="CMS_2184" /old_locus_tag="CMS2184" /db_xref="GeneID:6157822" CDS complement(2311040..2311741) /locus_tag="CMS_2184" /old_locus_tag="CMS2184" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710865.1" /db_xref="GI:170782532" /db_xref="GeneID:6157822" /translation="MTAPDTSTPSPVAGSAPWSCILFDLDGTITDSAPGITAQLAKTL VFMGLPVPGPAQLLEYVGPPILDSFRDLAGMDDDAQQRALAHYREGYAGGGVFDSSVY VGVPEVLRAIHAAGIPLSLATSKPESQARRVLDHYGLTELFTEICGASEDEVRSAKAD VIEEALRRLRAAGVDLGNAVMVGDREHDVLGAAAHGIPTVMVGWGYGSPAEAAGTIAV VDTAAELEARLLPAA" misc_feature complement(2311127..2311603) /locus_tag="CMS_2184" /old_locus_tag="CMS2184" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 1.7e-05" gene complement(2311791..2311997) /locus_tag="CMS_2185" /old_locus_tag="CMS2185" /pseudo /db_xref="GeneID:6157823" misc_feature complement(2311866..2311934) /locus_tag="CMS_2185" /old_locus_tag="CMS2185" /note="1 probable transmembrane helix predicted for CMS2185 by TMHMM2.0 at aa 22-44" /pseudo gene complement(2312133..2312828) /locus_tag="CMS_2186" /old_locus_tag="CMS2186" /db_xref="GeneID:6157824" CDS complement(2312133..2312828) /locus_tag="CMS_2186" /old_locus_tag="CMS2186" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710866.1" /db_xref="GI:170782533" /db_xref="GeneID:6157824" /translation="MRLVIARCSVDYAGRLSAHLPLATRLLMVKADGSLLVHSDGGSY KPLNWMSPPCSIVEVEPDDDQALAGVREIWRVIQPKTADMLVVSIHEVLHDSAHDLGV DPGLVKDGVEAHLQKLLAEQIHLLGDGHELVRREYMTAIGPVDILARDAAGKSVAVEL KRRGDIDGVEQLTRYLELMNRDPHLAPVTGVYAAQEIKPQARTLAEDRGIRCLLLDYD AMRGMDDGHSRLF" misc_feature complement(2312136..2312828) /locus_tag="CMS_2186" /old_locus_tag="CMS2186" /inference="protein motif:HMMPfam:PF01939" /note="HMMPfam hit to PF01939, Protein of unknown function DUF91, score 1e-102" misc_feature complement(2312364..2312387) /locus_tag="CMS_2186" /old_locus_tag="CMS2186" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2312541..2312570) /locus_tag="CMS_2186" /old_locus_tag="CMS2186" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene complement(2312939..2313199) /locus_tag="CMS_2187" /old_locus_tag="CMS2187" /db_xref="GeneID:6157825" CDS complement(2312939..2313199) /locus_tag="CMS_2187" /old_locus_tag="CMS2187" /codon_start=1 /transl_table=11 /product="putative regulatory protein" /protein_id="YP_001710867.1" /db_xref="GI:170782534" /db_xref="GeneID:6157825" /translation="MARIINGREVDESQVDEWVDEAEAGYDVGTLRSRWGRAPRGESA AKVIPVRLTEAELEAVMARAQREGLNRSEAIRAALDAWSHAA" misc_feature complement(2312945..2313067) /locus_tag="CMS_2187" /old_locus_tag="CMS2187" /inference="protein motif:HMMPfam:PF01402" /note="HMMPfam hit to PF01402, Helix-turn-helix protein,CopG, score 0.00058" gene complement(2313227..2314144) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /db_xref="GeneID:6157826" CDS complement(2313227..2314144) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710868.1" /db_xref="GI:170782535" /db_xref="GeneID:6157826" /translation="MQFAAMGTVWGASFLFMKVALEGVSFGQVSWTRLVLGAVALGLI VAARRLPLPKERVVWLHFAVVGVVGSAVPYSLFAWAEQHVTSGVASIYNATTPIMTAL LATLAFRVEKLGRRQLAGIALGIVGVVVIIGPWRLAPSAEAAASGEPPLELAGQLACL GAALCYGITFGYLRRFLTHRGIPGVVTAFMQIGMGAAAMILATPFLATGPVALDLPVV LSLVVLGVVGTGLAYLWNMNVLLAWGPTATSTVTYITPVVGVALGILVLGETLHWNEP AGAALVLLGVLLSQGRRRAARGSTAPTMV" misc_feature complement(2313272..2313655) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 1.4e-18" misc_feature complement(order(2313326..2313394,2313428..2313496, 2313524..2313592,2313629..2313688,2313731..2313790, 2313827..2313895,2313908..2313976,2313995..2314054, 2314082..2314144)) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /note="9 probable transmembrane helices predicted for CMS2188 by TMHMM2.0 at aa 61-83, 93-112, 119-141, 146-168,181-200, 215-234, 247-269, 279-301 and 313-335" misc_feature complement(2313746..2314123) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 1.1e-22" misc_feature complement(2313779..2313829) /locus_tag="CMS_2188" /old_locus_tag="CMS2188" /note="PS00216 Sugar transport proteins signature 1." gene 2314315..2314752 /locus_tag="CMS_2189" /old_locus_tag="CMS2189" /db_xref="GeneID:6157827" CDS 2314315..2314752 /locus_tag="CMS_2189" /old_locus_tag="CMS2189" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710869.1" /db_xref="GI:170782536" /db_xref="GeneID:6157827" /translation="MLGEAFPERRPDVVVYVDAPLEVLGSEDPVEVAAAYEHDRWGRT AEALRISRPEYSERDREVEGRAAERFDPATAAALAAVPSYAWEPEPGSIVVRADPSRF VSAEEAARLAASGVDVRSIPGAAHSVWYSRFDEFTAALPEAFG" gene 2314797..2315315 /locus_tag="CMS_2190" /old_locus_tag="CMS2190" /db_xref="GeneID:6157828" CDS 2314797..2315315 /locus_tag="CMS_2190" /old_locus_tag="CMS2190" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001710870.1" /db_xref="GI:170782537" /db_xref="GeneID:6157828" /translation="MTMSPAPVLVTARFALEPLVVGHAGEMVGVLADPALYRFTGGEP PTLDVLRERFARQAAGRSPDGSARWLVWVLRERASGRAAGFVQATVTVERDARVAAVA WLVGTAAQGSGAAAECAAAMVAWLREDGVAIVRAHIHPDHAASGAVARRLGLRPTDAR VDGEVRWELRAG" misc_feature 2315016..2315261 /locus_tag="CMS_2190" /old_locus_tag="CMS2190" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 0.0045" gene complement(2315326..2316288) /locus_tag="CMS_2191" /old_locus_tag="CMS2191" /db_xref="GeneID:6157829" CDS complement(2315326..2316288) /locus_tag="CMS_2191" /old_locus_tag="CMS2191" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710871.1" /db_xref="GI:170782538" /db_xref="GeneID:6157829" /translation="MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2315338..2315880) /locus_tag="CMS_2191" /old_locus_tag="CMS2191" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.1e-37" misc_feature complement(2316151..2316216) /locus_tag="CMS_2191" /old_locus_tag="CMS2191" /note="Predicted helix-turn-helix motif with score 1638.000, SD 4.77 at aa 25-46, sequence RPVSHVARELGVSRQCAHRWVA" gene 2316499..2317461 /locus_tag="CMS_2192" /old_locus_tag="CMS2192" /db_xref="GeneID:6157830" CDS 2316499..2317461 /locus_tag="CMS_2192" /old_locus_tag="CMS2192" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710872.1" /db_xref="GI:170782539" /db_xref="GeneID:6157830" /translation="MTHANAPFTPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSRRRERRIVALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT" misc_feature 2316571..2316636 /locus_tag="CMS_2192" /old_locus_tag="CMS2192" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2316895..2317437 /locus_tag="CMS_2192" /old_locus_tag="CMS2192" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.7e-42" gene complement(2317458..2317949) /locus_tag="CMS_2193" /old_locus_tag="CMS2193" /db_xref="GeneID:6157831" CDS complement(2317458..2317949) /locus_tag="CMS_2193" /old_locus_tag="CMS2193" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710873.1" /db_xref="GI:170782540" /db_xref="GeneID:6157831" /translation="MQIEHRYALSVEWTGDRGSGTSDHRSYGRDHVVRAAGKPDLLGS ADRPFRGDVDRWNPEETLISALAQCHLLSYLHAAATAGVVVVGYSDEPTGTMRQTDGG GGHFVEVTLRPVVTVRDPAHVELATSLHQGASERCFIASSVNFPVRHEPRTVLEAEAE PDA" gene 2318114..2319436 /gene="gabT" /locus_tag="CMS_2194" /old_locus_tag="CMS2194" /db_xref="GeneID:6157832" CDS 2318114..2319436 /gene="gabT" /locus_tag="CMS_2194" /old_locus_tag="CMS2194" /EC_number="2.6.1.22" /codon_start=1 /transl_table=11 /product="putative 4-aminobutyrate aminotransferase" /protein_id="YP_001710874.1" /db_xref="GI:170782541" /db_xref="GeneID:6157832" /translation="MPQERRIVTEIPGPLSRELHERRKRVVPPGVSSLLPVYISRAHG AIVEDVDGNRFIDLGAGIGVTTVGHTRQEVVDAATAQLGDVIHTLFTVTPYEEYVRVA ELLAEHTPGTHEKRTVLVNSGAEAVENGVKIARKHTGRRAVAVLDHGYHGRTNLTMAM NYKASPYGTGFGPFAGDVYHAPSSYPYHDGLSGAEAAARTISYLEKRIGATDLACVVA EPIQGEGGFMVPADGFLPALQEWCTANGVVFIADEIQSGLARTGRFFASEHLGLVPDL VLTAKGIAGGLPLAGVTGRAEIMDSALPGGLGGTFGGNPVAAAAAVAVFEAIETHGLL DEATRIGDHLHRALTELQQEHDIIGDVRGIGAMIAIELVQPGTGSTTKEPNADAVAAI AAYCHAHGVIILTAGTYGNVLRFLPSLAISEELLGDALGVLADAFRAL" misc_feature 2318189..2319424 /gene="gabT" /locus_tag="CMS_2194" /old_locus_tag="CMS2194" /inference="protein motif:HMMPfam:PF00202" /note="HMMPfam hit to PF00202, Aminotransferase class-III,score 2.3e-142" misc_feature 2318858..2318971 /gene="gabT" /locus_tag="CMS_2194" /old_locus_tag="CMS2194" /note="PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site." gene 2319436..2320446 /gene="ansA" /locus_tag="CMS_2195" /old_locus_tag="CMS2195" /db_xref="GeneID:6158705" CDS 2319436..2320446 /gene="ansA" /locus_tag="CMS_2195" /old_locus_tag="CMS2195" /codon_start=1 /transl_table=11 /product="putative L-asparaginase II" /protein_id="YP_001710875.1" /db_xref="GI:170782542" /db_xref="GeneID:6158705" /translation="MGTSVETIAVQGAVELAVLERSGFVESRHIGAAVVLSPAGEVLR EVGDATTPVFPRSSMKPFQALAVLASGAELTEEEHVLATASHAATARHVEVVRGILAK AGLDESALRCPADWPLDRAARDELVRAGIPASPVYMNCSGKHAAMLLACVTNGWSTDD YLHPDHPLQVRIRDVVERFTGERIATTGIDGCGAPVHAMSLTALARGIHRIATSAPGS PFALYRHAAALTAAVRAHGWAIDGPGRANTVVIEHLGLFAKGGAEGIMIMTAPDGTTV ASKTLDGSLRASTIVALELLAQAGAITRDDVERVRPELDLAVLGGGVPVGEIRVSPAL IG" misc_feature 2319466..2320428 /gene="ansA" /locus_tag="CMS_2195" /old_locus_tag="CMS2195" /inference="protein motif:HMMPfam:PF06089" /note="HMMPfam hit to PF06089, L-asparaginase II, score 1e-83" gene complement(2320436..2323870) /locus_tag="CMS_2196" /old_locus_tag="CMS2196" /db_xref="GeneID:6158596" CDS complement(2320436..2323870) /locus_tag="CMS_2196" /old_locus_tag="CMS2196" /codon_start=1 /transl_table=11 /product="FtsK/SpoIIIE-related protein" /protein_id="YP_001710876.1" /db_xref="GI:170782543" /db_xref="GeneID:6158596" /translation="MDISPPPSPVPAPPPPFPVLGVAAPLVVSVAVWAVTRSPYALLF AALGPVVAVAGVADQRISGRRSARRVERESRAALARLHAEVRARVAAARTALRSRAPS AREILDGSANPALLWRADPGDGGTLPIALGTGEVPSGLVWRGDPDARVPDAEERSGGG TLRARLSGRSPLRRIRRARVDARAAVASSAAHDPARWADLVRWVPDAPVFVPAAGGLG LRGAPALVEPVLRGVVVQLVHALPPDDLRIASRPAGPEWDWLERLPHAAEGLREARTG ADRPAAPGVVPGAVPGEPGASAIRLVLGAREVVLAAAPRVESLPAACRTVLDVRTPGT ARILAADTVPDAPDALLALDALPSTATAPSHVLPPVGGRVGIPSPRVTRTGLVRPDLV SLTEVERLADELADLARRRGLAAARAPLPSRVPFAELPVAGAPGTSTLGLAAGDGSDA GWDGVAPTRRPRTLAAVIGIGHAGPVAVDLVADGPHAVVAGTTGSGKSELLVTWMAAL AAAHPPEEVTVLLVDFKGGAAFDPLLVLPHAVGLVTDLDGQGARRALESLRAEIRHRE RVLREAGARDVDDPAAAGVLPRLVIVVDELAALLADQDGLHEVVADIAARGRSLGMHL VLCTQRPSGVVRDAVLANCDLRLSLRVNNEADSRALLGTAEAARLSDAPAGRCLVGAH GAPTRPFQVGVTTADDLARIAAARATSAPVRRPWLDPLPACVPLADLAAVPPLAKHGS ASPGVGAPAVPFALVDLPAEQRRATAEWCPATDGHLLVIGGPGSGRSTCLRTIAASAA ASGVDVVHVPADAEGCWDAVAAVVSRIRDPRRARDPLLVLADDLDVAVSRLDPEHQAA LLEGMAAVVREGPHAGVALAVSGRRAGGPLQAVAAAAGPPVILALPSRQEHVLAGGDG RLFDARATPGAGEWRGERIQVAQPPEVEAEPEAESARRGRAASRPGVVDPAPRAVLAG GAVHALVTPSPVVQVARLREMGVDAVEATRIPPGWSPDQPFPGAAGDGAATRPEVGHG GHPDGGRAARPRVVVGDPDAWLLRAPLLADLRRIGDVVMEGCTPRDARTLLRVRAVPP PLAPVPGRAWRITPDGDVRRCSWPPVMPGLPVAPAQAEAAATAAATAPVQPAGVSR" sig_peptide complement(2320436..2320537) /locus_tag="CMS_2196" /old_locus_tag="CMS2196" /note="Signal peptide predicted for CMS2196 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.517 between residues 51 and 52" misc_feature complement(2321972..2322535) /locus_tag="CMS_2196" /old_locus_tag="CMS2196" /inference="protein motif:HMMPfam:PF01580" /note="HMMPfam hit to PF01580, Cell divisionFtsK/SpoIIIE protein, score 7.5e-31" misc_feature complement(2322377..2322400) /locus_tag="CMS_2196" /old_locus_tag="CMS2196" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2323961..2326474) /locus_tag="CMS_2197" /old_locus_tag="CMS2197" /db_xref="GeneID:6157833" CDS complement(2323961..2326474) /locus_tag="CMS_2197" /old_locus_tag="CMS2197" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710877.1" /db_xref="GI:170782544" /db_xref="GeneID:6157833" /translation="MSAAGSRRAAPGRDAGRPRVPAGSRDPGRTLVPVLAIALLTGLA AAAFWPVYRDASFVRMAGITLVVGALVAVAGARFRWGSAVVAGAVLVAFLALGVPLAV PTGAVDGWRPTLAGLGELVEGASLGVVRLLTIALPVGDYQALLVPAFALVLLGSVIGV SVALRAQRPELAVIPSLVILLAAAALGPDRSQGPDAPDVSGLLVPVALAWLATALLWI ARCRWRRRHRAVRRLGRQSGIPAESASDRRRSGTRAGAAAAVVLAVALVAGVAATGAA PPDASRTGLRSAVEQPFDPREQVSPLSSFRTYWKTPAVDGTLLTVAGLPAGGRVRLAA LDTYDGVVYGTGGARGSVDASRTGQASGTFARVPYRLDQTGVAGDDVTLDVVIDSYRG VWLPGAGRLERIAFAGDGGGRLADSFYYDDATATGAVIGGLTTGDAYEIEAVVASTPP LEALADERPGDAVAPRPTSVPDEVAARVEASTAAPDGATAGGADAGAGTSASPGAQLV AAISALRADGYVSHGVGDAPFSRSGHSAERIADLLTTRPMLGDAEQYAVAAALMADDL GFPVRVVMGFAPGEAAVREADGGPVAVRGSDVTAWIEVDTASSGWVAVDPNPPVRDVP DALPDEPTEVARPQTVLPPPAEEQAEPEDRTPPDTGRDDRPEADPALQAVLAAVRVAG WSLLGLGLAASPFLAVVGAKVSRRRRRRRASAARDRVGGAWDEFRDGALDRGLVPAVA ATRREVARLVGVGGARGLADMADESAFAPGDVPDPLADAAWRRVDELAARMDAGRSRR QRIRAMVSLASLRRASGGRAGGAGSRAPGGPAVRRPPRP" misc_feature complement(order(2324372..2324440,2325647..2325715, 2325818..2325871,2325914..2325967,2325986..2326054, 2326154..2326222,2326241..2326309,2326319..2326387)) /locus_tag="CMS_2197" /old_locus_tag="CMS2197" /note="8 probable transmembrane helices predicted for CMS2197 by TMHMM2.0 at aa 30-52, 56-78, 85-107, 141-163,170-187, 202-219, 254-276 and 679-701" gene complement(2326471..2328048) /locus_tag="CMS_2198" /old_locus_tag="CMS2198" /db_xref="GeneID:6157834" CDS complement(2326471..2328048) /locus_tag="CMS_2198" /old_locus_tag="CMS2198" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710878.1" /db_xref="GI:170782545" /db_xref="GeneID:6157834" /translation="MSAVGTRGGADAADPAAVARAVAPAPEPGAAPAVAGAAGAAGAA AAAAAAGAAGPAPAVARPRHALARLVAVVTPLGRVVALGAVLAGAAGYALGWRELVAV GWTAGALWLIALLHLVGSSGVEVSLRLPRDRVVAGERAPATVAVRNPLRRRAVGLTVE VPVGSGLAEVHVPSLAHGHTHEDVFVVPTSRRGVIALGPARIVRGDPIGLVRRESAEA AATRLLVHPRTLAMPSTSTGFVRDLEGRATRDLTDSDVSFQSLREYVPGDPVRHIHWR STAKTGVHMVRRFEEIRRSHIMVALSLHAGDYGDGEAAVAEAGAPAGGAGAIPAGGTT VAAGHAAGALAGSTADAEFELAVSVVGSLGARAIVDARTLQVVASADRTARRVRRLPT VPTLPGLARTVARSGPPGSRSARLRRLATVTRDRLLDDLAEITASDRAASLVELARAA SDEVAGVSVVFLVCGTGAAPAAIRSAAVGFPPGVQVVAVVCDPEVEPGLRRLGDLSVL TIGYLDDLRGALQRSAS" sig_peptide complement(2326471..2326626) /locus_tag="CMS_2198" /old_locus_tag="CMS2198" /note="Signal peptide predicted for CMS2198 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.385 between residues 52 and 53" misc_feature complement(2327173..2327481) /locus_tag="CMS_2198" /old_locus_tag="CMS2198" /inference="protein motif:HMMPfam:PF01882" /note="HMMPfam hit to PF01882, Protein of unknown function DUF58, score 2.8e-20" misc_feature complement(order(2327680..2327748,2327776..2327844, 2327881..2327949)) /locus_tag="CMS_2198" /old_locus_tag="CMS2198" /note="3 probable transmembrane helices predicted for CMS2198 by TMHMM2.0 at aa 34-56, 69-91 and 101-123" gene complement(2328045..2329049) /locus_tag="CMS_2199" /old_locus_tag="CMS2199" /db_xref="GeneID:6157835" CDS complement(2328045..2329049) /locus_tag="CMS_2199" /old_locus_tag="CMS2199" /codon_start=1 /transl_table=11 /product="putative ATPase" /protein_id="YP_001710879.1" /db_xref="GI:170782546" /db_xref="GeneID:6157835" /translation="MTADEARAFQDEFARLVRNVEQVLLGKSHVVRLAFTAMVTGGHL LLEDVPGIGKTSLARAIAQTVDGTHSRVQFTPDVLPGDITGVSVYDQRTGEFEFHRGP VFASIVLADEINRASPKTQSALLEVMEEGRVTVDGTPYDVGHPFMVIATQNPIEQAGT YALPEAQLDRFLLRTSIGYPDHESMLRILQGASVSAHDVTLAPVASAAAVRALQERAG TVHVDPAVADYVVRLVDATRAAPEVRLGASVRGALALVRASRTWAAADGRHYVVPDDV KALAEPVLAHRLLLDPEAEFDGVTPTSVLSQILIETAPPRDGHAGARAAGPSAARPGG" misc_feature complement(2328273..2328923) /locus_tag="CMS_2199" /old_locus_tag="CMS2199" /inference="protein motif:HMMPfam:PF07728" /note="HMMPfam hit to PF07728, ATPase family associated with various cellular activities (AAA)" misc_feature complement(2328531..2328923) /locus_tag="CMS_2199" /old_locus_tag="CMS2199" /inference="protein motif:HMMPfam:PF07726" /note="HMMPfam hit to PF07726, ATPase family associated with various cellular activities (AAA)" gene complement(2329116..2335139) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /db_xref="GeneID:6157836" CDS complement(2329116..2335139) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /codon_start=1 /transl_table=11 /product="putative large exported protein" /protein_id="YP_001710880.1" /db_xref="GI:170782547" /db_xref="GeneID:6157836" /translation="MIREWIRRHRQAATTVTGGAVVLALLTGFALVSDGYQAQRVDLD DGSVWVVNSAQQAIGRANTSVLELDSVVDSRSEDIDVLQAGSTVLLADRGSSRLDVVD DATSAVVDTAPLPAGAEVMLAGSRAAILVPATGQLWLVPVAGLSAFDAASAPALLLGT DAVASMGDDGTLLVYSAATGALSRIQAATEDTVSETVDVGPVGAPVDEAADALADPAA ALAGETVQAGDSGRPAGQRLALASVGDHWALYDADARALLVDGRTVDLAGSVAADARV ALQRASSDGSGVLVAHSGGLVDVPVAGGEPVVVSGDARGEPARPVRVAGCEYAGWTDG SGWQRCLAPAVLPGAGEVDQDARRTAAGATGDLGSMPQQASLRFVVDGARVVLNDTRG GTAWAVQRDAGRIDNWSDLIDRDRSDTVVEQNTADTPPETDRVQQPPVAVDDDLGARP GRTTALPVLLNDHDPNGDVLVIDSVTPVDAEVGAVDVVDDGQGLQLALAARASGTVRF SYVVSDGRGGTATADVRVAVRAPDENAPPVQVRPATGSVAEGDRLQTDVLGGWYDPDG DPVYLTRASVAAPDAVSWKPEGRVVYTDAGAGGDTRTVALQVSDGREEGSGELVVTVR REGDVPLVAEGFVVQASLGREITVEPLTHARGGSGAIRLAAVPARAGVQITPDLEAGT FRLQGGQAGTHLLEYTVTDGRTTATGVVRVEVRGAVESDGRPVTVPHTVFVRALQAQD VDVLQADFDPAGGVLVITDATSPDDAVGVRAEVVGQRLVRISLTRPLDGPVDVAYRVS NGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDIPVLANDEQPDGDALRLD PVLVDPLPEGAGLLFASEDRLRYLAPDRTGDYTAVYRAVAPDGQWATATLTVSVREAD VATNAAPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDSGPEKGQVIEVGPD WIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISTRVEGARNPVATADTVTVRPG RVLRVQVLANDTDPDGGALELVSVQPQAEGLVAGLDGDTVRVVAPEQAGRYGFVYGVR NARGGSDEAFLTVIVDPAAPPTRPIARDTVLQLSDVLDRSSVDVDVMRSVFSAEGDAS SLVLAVGAGYEDVARVTADGRIRVEVGDERRIVPFTVAQPDDPSISATAFVWVPGFED TLPQLRVGVPRPTVASGERLVVELDQQVVAAGGRAVRIADPNSPQATHADGPVELVDE DTVAYRSEPGYFGPAAISFTVTDGSGSGADGGRTAALVLPITVTPTENQPPVFTGAVI DLEPGQSKDVDLGRLTTYPYQDDRGQLAFALEGAVAAGFRASVDGGTLRISADEAAAT GQAASFPVSVRDATQTGRAGRVDLRVVPSTRPLAEPATDEGEVTRGSSTSIDVLANDQ AGNPFPGTPLTVASIRGADGASLPAGVTVTPSADRATLAVNASADAEPGDVRVQYEVR DATGDAGRAAFGTVVIHVQDRPGPVSALRASGFADRSLTVAFEPGAFNGSAITGYQVR VLRGGTATAAVVCPSTTCTVPTPGNGPAASVQVEVVAINGVGTSDPVSISGLWSDVLP AAPAGLAIEPLVDGLRVSWQPSAVPSSSSPVTQYVVGVGGITRQVAADATSVEVRDPS LVAEVPVAVAVAARNSAQVQDASAWLAATATGTPRGAPTATGVPGAVADPADETRVTV SWPAFQGQGVDGIRYLVAAYAPGSAPGCSVPTEGVSPWSAEHGPAVDVGGATSHVFTG LATDQPVAFAVLAANSQGCTVVEAGQLIPRTAPSTPVVTVDLPSPDRGSDGVFRAVLA DARYRPGDPSASALLLYRVDGQGDGVPIGVGQALTLPRTGVGATIQVRVVEDSGDGRQ RSSGWSDPVSAGTAVDARAGDVRSATDDAGVTAFSWTSMPPAAGRGARVGDGSGYARS EWRCGGQGAWTDASSGAAGSCAVPAGGERILEVRVTANSGTLYTYAHRG" sig_peptide complement(2329116..2329211) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /note="Signal peptide predicted for CMS2200 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.684 between residues 32 and 33" misc_feature complement(2329491..2329508) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature complement(2330067..2330312) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /inference="protein motif:HMMPfam:PF00041" /note="HMMPfam hit to PF00041, Fibronectin, type III,score 0.024" misc_feature complement(2330352..2330594) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /inference="protein motif:HMMPfam:PF00041" /note="HMMPfam hit to PF00041, Fibronectin, type III,score 0.00043" misc_feature complement(2335044..2335103) /locus_tag="CMS_2200" /old_locus_tag="CMS2200" /note="1 probable transmembrane helix predicted for CMS2200 by TMHMM2.0 at aa 13-32" gene complement(2335136..2336694) /locus_tag="CMS_2201" /old_locus_tag="CMS2201" /pseudo /db_xref="GeneID:6157837" misc_feature complement(2335436..2335504) /locus_tag="CMS_2201" /old_locus_tag="CMS2201" /note="1 probable transmembrane helix predicted for CMS2201 by TMHMM2.0 at aa 17-39" /pseudo misc_feature complement(2335897..2336652) /locus_tag="CMS_2201" /old_locus_tag="CMS2201" /inference="protein motif:HMMPfam:PF00069" /note="HMMPfam hit to PF00069, Protein kinase, score 1.1e-21" /pseudo gene complement(2336852..2338177) /gene="gltA" /locus_tag="CMS_2203" /old_locus_tag="CMS2203" /db_xref="GeneID:6157838" CDS complement(2336852..2338177) /gene="gltA" /locus_tag="CMS_2203" /old_locus_tag="CMS2203" /EC_number="2.3.3.1" /note="type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH" /codon_start=1 /transl_table=11 /product="type II citrate synthase" /protein_id="YP_001710881.1" /db_xref="GI:170782548" /db_xref="GeneID:6157838" /translation="MTDGGQQADDRPKADEKPTATLTYPGGRMEFPILPAVEGASSID ISALTKKTGLTTLDNGFVNTASTRSAITYIDGEQGILRYRGYPIEQLARHSSYLEVAW LLIHGELPTSDELAGFEDDIRRHTLLHEDFKGLFRALPTNAHPMSVLSSAVSALSTYY EDSLSVHDPEQVEISTLRLLAKLPVIAAYAHKKSLGQAFLYPDNSLGFVDNFLRLNFG NNAERYEVDPVVSRALERLLILHEDHEQNASTSTVRLVGSTEANMFSSVSAGIGALFG PLHGGANEAVLAMLGRIRDSGEGVDRYVERVKNKEDGVRLMGFGHRVYKNFDPRARLV KESADEVLEALGIQDPLLDIAKELEAVALADDYFIERKLYPNVDFYTGVIYKAMGFPT RMFTALFTIGRLPGWIAHWREMNEDRSTKIGRPQQLYIGQPARDLPPRD" misc_feature complement(2336903..2338000) /gene="gltA" /locus_tag="CMS_2203" /old_locus_tag="CMS2203" /inference="protein motif:HMMPfam:PF00285" /note="HMMPfam hit to PF00285, Citrate synthase, score 1.4e-188" misc_feature complement(2337188..2337226) /gene="gltA" /locus_tag="CMS_2203" /old_locus_tag="CMS2203" /note="PS00480 Citrate synthase signature." gene complement(2338340..2339464) /locus_tag="CMS_2204" /old_locus_tag="CMS2204" /db_xref="GeneID:6158727" CDS complement(2338340..2339464) /locus_tag="CMS_2204" /old_locus_tag="CMS2204" /note="catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis" /codon_start=1 /transl_table=11 /product="N-succinyldiaminopimelate aminotransferase" /protein_id="YP_001710882.1" /db_xref="GI:170782549" /db_xref="GeneID:6158727" /translation="MALGELPDYPWDQMAPYAERARRHPDGIVDLSIGSPVDPTPTLI RDALAWATDAHAYPTTVGTPELRQAMVDWHARRRNATLGTDQVLPTIGSKEMVAWLPF MLGLGEGDAVVHPRVSYPTYAIGAALAGAESVPADDPAEWPAHTRLVWLNSPGNPDGR VLGVDELRAAVARARELGAVIASDECYAELGWDGEWALGPTPSILDARVVGDDHAGVL ALYSLSKQSNLAGYRAALVAGDRELIARLIRVRKHAGLLPPAPLQHAMTVALGDDAHV RVQRELYRARRDVLRPALEDAGWRIDRSEAGLYLWATRGQGAWEGIAELADLGILAGP GPFYGDASPEHVRLSLTATDERIAQAAARLRAGATTGRTA" misc_feature complement(2338361..2339251) /locus_tag="CMS_2204" /old_locus_tag="CMS2204" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 8.9e-07" misc_feature complement(2338760..2338801) /locus_tag="CMS_2204" /old_locus_tag="CMS2204" /note="PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site." gene complement(2339470..2339790) /locus_tag="CMS_2205" /old_locus_tag="CMS2205" /db_xref="GeneID:6157839" CDS complement(2339470..2339790) /locus_tag="CMS_2205" /old_locus_tag="CMS2205" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_001710883.1" /db_xref="GI:170782550" /db_xref="GeneID:6157839" /translation="MTYVIALPCVDVKDRACIDECPVDCIYEGERSLYIHPDECVDCG ACEPVCPVEAIYYEDDLPEKWSDYYTANVEFFAEMGSPGGATKVGVTAGDHPVIAALP IQNG" misc_feature complement(2339623..2339694) /locus_tag="CMS_2205" /old_locus_tag="CMS2205" /inference="protein motif:HMMPfam:PF00037" /note="HMMPfam hit to PF00037, 4Fe-4S ferredoxin,iron-sulfur binding, score 3.8e-08" misc_feature complement(2339638..2339673) /locus_tag="CMS_2205" /old_locus_tag="CMS2205" /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature." gene complement(2339831..2341189) /locus_tag="CMS_2206" /old_locus_tag="CMS2206" /db_xref="GeneID:6157840" CDS complement(2339831..2341189) /locus_tag="CMS_2206" /old_locus_tag="CMS2206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710884.1" /db_xref="GI:170782551" /db_xref="GeneID:6157840" /translation="MTSGTSRRPDRAARTARPEREHVLLVHAHPDDESIVTGGTIAKL VRDGVPVTVLTCTRGERGDVIPEELRYLEGDLRALADHRETELADAMAALGVTDHRFL GDADARWRGLEARRYVDSGMEWGDDGVPVALRPLDPDSLCAGDEADEARDVLAVIADV DATSVITYDDHGGYGHPDHVRTHLIATWAAEEAGIPAYLITTTASSAREAHELVAARG RFPAPDADPAGTLVLPDDQVDLAVDASEVLDAKIRAIAAYRTQTVVDGDQFALSHGIG APIAPVELFRLHRPAGATPDDGAPRPPRGAQRIGTAVASLVLGLLVGAVGTAAHRATL PVGGIPLPVGLVLALATLACLLVAFRLLLVDRLHALCLGLGVVAAVAVLGTQGPSGSV LFPDDGLSQVWAIAPAILVAAVVVWPRFSNRAPGSAARPDAAAAAGSGAPAPAGTGSR AA" misc_feature complement(order(2339927..2339986,2340029..2340082, 2340101..2340169,2340197..2340265)) /locus_tag="CMS_2206" /old_locus_tag="CMS2206" /note="4 probable transmembrane helices predicted for CMS2206 by TMHMM2.0 at aa 309-331, 341-363, 370-387 and 402-421" misc_feature complement(2340620..2341120) /locus_tag="CMS_2206" /old_locus_tag="CMS2206" /inference="protein motif:HMMPfam:PF02585" /note="HMMPfam hit to PF02585, LmbE-like protein, score 1.5e-37" gene 2341369..2342268 /locus_tag="CMS_2207" /old_locus_tag="CMS2207" /db_xref="GeneID:6157841" CDS 2341369..2342268 /locus_tag="CMS_2207" /old_locus_tag="CMS2207" /codon_start=1 /transl_table=11 /product="putative cation permease" /protein_id="YP_001710885.1" /db_xref="GI:170782552" /db_xref="GeneID:6157841" /translation="MFANYLIGLREGLEAALVVTILIAYVVKIGRRDVLGRLWLGVGL AVLLALSIGAILTYGAYGLTFEAQEAIGGSLSIVATGLVTWMVFWMLRTAKDMRSELQ GAVDRAIAGAAWGLVAVAFLAVGREGIETALFLWSAVQATGATTMPLVGAGLGLVTAV ALGWLVYRGVLRIDLARFFTWTGALLIVVAGGVLAYGVHDLQEAGILPGLGALAFDVS GAVPPGSWYGTLLKGTVNFSPATTWLEAITWVLYVVPTLTVYLTLARRGRRARPADAP PAARVDTAPAGDAPRVADAPAAR" misc_feature 2341369..2342184 /locus_tag="CMS_2207" /old_locus_tag="CMS2207" /inference="protein motif:HMMPfam:PF03239" /note="HMMPfam hit to PF03239, Iron permease FTR1, score 1e-68" misc_feature order(2341381..2341449,2341483..2341551,2341579..2341641, 2341675..2341743,2341801..2341869,2341903..2341962, 2342089..2342157) /locus_tag="CMS_2207" /old_locus_tag="CMS2207" /note="7 probable transmembrane helices predicted for CMS2207 by TMHMM2.0 at aa 5-27, 39-61, 71-91, 103-125,145-167, 179-198 and 241-263" gene 2342339..2343556 /locus_tag="CMS_2208" /old_locus_tag="CMS2208" /db_xref="GeneID:6157842" CDS 2342339..2343556 /locus_tag="CMS_2208" /old_locus_tag="CMS2208" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710886.1" /db_xref="GI:170782553" /db_xref="GeneID:6157842" /translation="MKRSTLPAAALLAGAALALSGCVANAPTGSADAGAGAASADSGV TQLTVDSSADACTVSAATAPSGTVSFHVTNSTDQVTEFYLLADDGLRIVGEVENVSPG IERDLVLTAQPGSYYTVCKPGMVGDGVGRAPFTVTGDQVALAGDAEQQGQDAAAAYLA YVKDQVGRLLPATQEFADAYLASDDDRARSLYPTARAYYERVEPVAESFGDLDPEIDF READVEPGTEWTGWHRIEKDLWQPSPDANGGDVYTPLGTADRAHFAQELTADTQELYD AVHADGFSVDISTVSNGAVGLMDEVASGKITGEEEIWSHTDLWDFQANLEGARVAYEG VRDIVAPKDPQLVATLDAQFASLETELAAYGTLDKGFTTYDRLTTEQVKGLADGVNAL AEPLSKLTGALVG" sig_peptide 2342339..2342458 /locus_tag="CMS_2208" /old_locus_tag="CMS2208" /note="Signal peptide predicted for CMS2208 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.446 between residues 40 and 41" misc_feature 2342372..2342404 /locus_tag="CMS_2208" /old_locus_tag="CMS2208" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 2342750..2343547 /locus_tag="CMS_2208" /old_locus_tag="CMS2208" /inference="protein motif:HMMPfam:PF04302" /note="HMMPfam hit to PF04302, Protein of unknown function DUF451, score 2.7e-84" gene 2343556..2344908 /locus_tag="CMS_2209" /old_locus_tag="CMS2209" /db_xref="GeneID:6157843" CDS 2343556..2344908 /locus_tag="CMS_2209" /old_locus_tag="CMS2209" /codon_start=1 /transl_table=11 /product="putative peroxidase" /protein_id="YP_001710887.1" /db_xref="GI:170782554" /db_xref="GeneID:6157843" /translation="MTDHETTAADDAPAPAPATPAPPAASAPAGISRRGILGLLGAGA LGGGLVGSAGGVLADRAFAGVRQAAGGATYAFHGAHQAGITTPAQDRLHFAAFDVADI DRAGLISLLKDWSAAAARMTAGGSAGTLGAVDGPYDSPPDDTGEALDLPPAGLTITFG LGPSLFTTADGVDRFGIADRRPAALVDLPRFPGEALIPQATGGDLCIQACSDDPQVAV HAIRNLSRIAFGRASIRWSQLGFGRTSSTSRAQVTPRNLFGFKDGTANVKSEDTRQVD DHVWADAGSSPAEAWMQGGSYLVARRIRMTIETWDRSSLREQERVVGRTKGSGAPLSG GTEMTAPDFHAVGRGGAPLIDPASHVRLAHPDANDGAVLLRRGYNFVDGNDDLGRLNA GLFFLAFQRDPRTQFIPIQRSLARDAMNEYLRHVGSGIWAVPPGATRDGYVGETLFAS" misc_feature 2343796..2344872 /locus_tag="CMS_2209" /old_locus_tag="CMS2209" /inference="protein motif:HMMPfam:PF04261" /note="HMMPfam hit to PF04261, Dyp-type peroxidase, score 5.9e-130" gene complement(2344938..2345348) /locus_tag="CMS_2210" /old_locus_tag="CMS2210" /db_xref="GeneID:6157844" CDS complement(2344938..2345348) /locus_tag="CMS_2210" /old_locus_tag="CMS2210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710888.1" /db_xref="GI:170782555" /db_xref="GeneID:6157844" /translation="MGEVVRDAAHEGAKQVRHSVEDVIGDTLGKVQVSTDGHVPPSFP TDAVPFAEGKLLGGGAAPEGAGWVAQVAVPDVAGGFADAQARLEAAGYASSDVASDAQ SGYGRFTTDAYSVIVTVSADPGSPVATYVVLPAG" gene complement(2345454..2347361) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /db_xref="GeneID:6157845" CDS complement(2345454..2347361) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /codon_start=1 /transl_table=11 /product="putative GTP-binding elongation factor" /protein_id="YP_001710889.1" /db_xref="GI:170782556" /db_xref="GeneID:6157845" /translation="MALVARNDLRNVAIVAHVDHGKTTLVDAMLKQTNSFDAHFEGED RMMDSNDLEREKGITILAKNTAVLYNGKHADGSPIVINVIDTPGHADFGGEVERGLSM VDGVVLLVDASEGPLPQTRFVLRKALEAKLPVILLVNKTDRPDARIDEVVAESQDLLL GLASDMSDEHPDLDLDAILDVPVVYASGRNGAASSNKPENGTLPDNDDLEPLFKAILD HVPAPTYDDQHPLQAHVTNLDASPFLGRLALLRVFNGTLKKGQQVAWVKHDGSVKNVK ITELLITKALDRFPTESAGPGDIVAVAGIEDITIGETLADPEDVRPLPTITVDDPAIS MTIGTNTSPLIGKVKGHKLTARMVKDRLDRELIGNVSIKLVDIGRPDAWEIQGRGELA LAILVEQMRREGFELTVGKPQVVVKQVDGKVHEPYEHLTIDSPEEYLGAITQLLAARK GRMEGMSNHGTGWVRMEFVVPSRGLIGFRTEFLTITRGAGIANAVSHGYEQWAGEITT RVNGSIVADRAGVATPFAMVALQERMSFFVEPTQEVYEGMVVGENSRADDMDVNITKE KQLTNMRQSTSDSFERMTPSRRLTLEECLEFAREDECVEVTPEFVRIRKVELDANARQ RKTSRLKKQNA" misc_feature complement(2345832..2346098) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /inference="protein motif:HMMPfam:PF00679" /note="HMMPfam hit to PF00679, Elongation factor G,C-terminal, score 1e-31" misc_feature complement(2346417..2346629) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 9.6e-14" misc_feature complement(2346690..2347343) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 7.5e-63" misc_feature complement(2347173..2347220) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /note="PS00301 GTP-binding elongation factors signature." misc_feature complement(2347293..2347316) /locus_tag="CMS_2211" /old_locus_tag="CMS2211" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2347476..2349329) /locus_tag="CMS_2212" /old_locus_tag="CMS2212" /db_xref="GeneID:6157846" CDS complement(2347476..2349329) /locus_tag="CMS_2212" /old_locus_tag="CMS2212" /note="Similar to CMS2218" /codon_start=1 /transl_table=11 /product="putative solute-binding transport protein" /protein_id="YP_001710890.1" /db_xref="GI:170782557" /db_xref="GeneID:6157846" /translation="MDSDTRGPEAIGARRPRGIRRVVRGASAAVAVALVAGLAACSPT TGMVADTEIRAAVPTTFTSYNAASRTGGTEGNREIVHATNSRFSEVAADGTVATDPGY GSARVVSRDPFTVEYTVAEGVRWSDGEPVDAADLLLAWAAGSGALDTPGYDPAGYVDD ATGGYTGPLPEQTVFFDAAADEALTHVTRTPEIGDGGRSITMVFDQYTPDWRLAFEVG LPAHSVAQLALDMSSPGRAKQTLVDAVQDRAPELLSPISDAWNRGFGVAEIAAHPDRA VGSGPYAIESIDPGTSITLRANRFYTGLHRPSVERIVVSTIEDPDAAVAALQAGDVDV IAPAADAEVADALSGIDGVQVVRGSSASWERLDLQTLGARDPAMSDAAVRTAFLSTIP RDAIVREAALPVDPDATTRDSFVLAPGTDGYADQVRANGSSRFGDVDLDEARQLLASV GRAAPEVCVLFDPADPRKVAAFDAIRDSAEKSGFVVTDCSTPQWESVLDQPGAYDAAL VSSEDAYPSVAGIRAAHEARADARDGQATADPDVASLFSSLSRTEDADARDELLLRLD RRMYGDRAGLPLYQLPALAAVRDRVGGVQVSPHQAGILDDAWRWTLSPDAP" misc_feature complement(2347731..2349059) /locus_tag="CMS_2212" /old_locus_tag="CMS2212" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 4.2e-21" gene complement(2349429..2351120) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /db_xref="GeneID:6157847" CDS complement(2349429..2351120) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /codon_start=1 /transl_table=11 /product="putative nucleotide-binding ABC transporter subunit" /protein_id="YP_001710891.1" /db_xref="GI:170782558" /db_xref="GeneID:6157847" /translation="MSAHANGTDPIVPILEVSGLGVDFWVGDEWIPAAIDLDYKVNPG EVLAIVGESGSGKSVSSMSLLGLLPKNGRVRGSAKLKGVEMVGADQATLRKARGNDIA VIFQEPMTALNPVYTVGFQIVEALRVHNSIIPSAAKVRALELLKLVEMPDPEKAFDSY PHQLSGGQRQRAMIAQSLSCDPDMLIADEPTTALNVTIQAEILDLLRRLHQRLNSAIV IITHDMGVVADLATNVIVMKSGRIVERGSVREIFQAPKDPYTKQLLASVPHLGTGEAS QVEIAERTTEPAISLKEVDIDYPKLGRVPAFRAVTGASFDIHPGEVVGVVGESGSGKT TIARAAVGLLPVAGGELTVAGRRMTGISAKDLRAVRREIGIVFQDPGSSLNPRWPIGQ SIGEPLELSGQFSKKQQSDRVEELLEQVELPRSFRNRYPNELSGGQRQRVGIARALAL RPKVLVADEPTSALDVSVQARVLALLQEIQKELQFACLFVSHDLAVVDLLADRIVVMN HGKIVEQGPTESILRNPQHPYTQKLIAAVPLPDPDQQKERRELREALRDQQPPAA" misc_feature complement(2349591..2350163) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.1e-66" misc_feature complement(2349777..2349821) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /note="PS00211 ABC transporters family signature." misc_feature complement(2350119..2350142) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2350401..2350991) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.4e-55" misc_feature complement(2350587..2350631) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /note="PS00211 ABC transporters family signature." misc_feature complement(2350947..2350970) /locus_tag="CMS_2213" /old_locus_tag="CMS2213" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2351192..2351797 /locus_tag="CMS_2214" /old_locus_tag="CMS2214" /db_xref="GeneID:6157848" CDS 2351192..2351797 /locus_tag="CMS_2214" /old_locus_tag="CMS2214" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710892.1" /db_xref="GI:170782559" /db_xref="GeneID:6157848" /translation="MDQPVVIRPSFGRLLTVIVSAIAVLVLVSTVVGGRADLLPTAVW GPVMLAYASWLVFWHPRVRIATEGIEIRNVFRTHEFSWPAIREVDTKWALNITTAHER VTAWAAPAPGRHSNAYITTKEERNQPYLSAMMQDARRGDLPRTDSGDAATVIRLHLAD LREAGHLGGPVEEEAPRVRTHWAEIAVLAVLVAATVLTGPI" sig_peptide 2351240..2351299 /locus_tag="CMS_2214" /old_locus_tag="CMS2214" /note="Signal peptide predicted for CMS2214 by SignalP 2.0 HMM (Signal peptide probability 0.675) with cleavage site probability 0.254 between residues 20 and 21" misc_feature 2351297..2351365 /locus_tag="CMS_2214" /old_locus_tag="CMS2214" /note="1 probable transmembrane helix predicted for CMS2214 by TMHMM2.0 at aa 20-42" gene complement(2351851..2352933) /locus_tag="CMS_2215" /old_locus_tag="CMS2215" /db_xref="GeneID:6157849" CDS complement(2351851..2352933) /locus_tag="CMS_2215" /old_locus_tag="CMS2215" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710893.1" /db_xref="GI:170782560" /db_xref="GeneID:6157849" /translation="MEGLSQGTVVRRRFLRHKGAMTSVVVLLLMAALVYSSVGIQLFG VRVPGWWMWNYEDVSPVVNGGNPTWQLPFQFGTHPFGQDEIGRDIFARVMRGTQQSIV VMVLYGIIAAFIGIVVGAVSGFFRGRIDSLLMRFTDLIIVIPVIVIAAVLGQTFGSLG AAVLGLVLGVVGWPSLARLVRGEFLSLREREFVDAARVAGASNSRIVFRHILPNAIGV VIVSTTLLMSAAILLEAALSFLGFGIKKPDVSLGQIINEYQGAFATRPWLFWFPGLFI IIIALTINFIGDGLRDAFDPRQRRMPGGQGPYKQMFAMLTGRNRRDAGPATGSGAAGV RVPPPVGSARPDAQADGQAPDSTDGR" sig_peptide complement(2351851..2351958) /locus_tag="CMS_2215" /old_locus_tag="CMS2215" /note="Signal peptide predicted for CMS2215 by SignalP 2.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.860 between residues 36 and 37" misc_feature complement(2352034..2352645) /locus_tag="CMS_2215" /old_locus_tag="CMS2215" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.4e-44" misc_feature complement(order(2352064..2352132,2352235..2352303, 2352394..2352462,2352472..2352540,2352559..2352627, 2352805..2352873)) /locus_tag="CMS_2215" /old_locus_tag="CMS2215" /note="6 probable transmembrane helices predicted for CMS2215 by TMHMM2.0 at aa 21-43, 103-125, 132-154,158-180, 211-233 and 268-290" gene complement(2353034..2354545) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /db_xref="GeneID:6157850" CDS complement(2353034..2354545) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710894.1" /db_xref="GI:170782561" /db_xref="GeneID:6157850" /translation="MRRLVASFFVLLGASFIIYNLAANSGDPLQDLRENPSPNRDALI AARVDLLDLDVPSPLRYFIWLGGVFKVFIGQVDLGKAIDGREVNEIIANAAGQTIQLV TIATIIAVLIGVSIGMTTALRQYSGYDYTVTFASFLFFSLPIFFVAVLLKQYVAIGFN DFLVNPSIPPIMIVVLSLVSGFVWMSIIGGDPKPRLIVFGSATVITAVVLIYLLATDW FSRPGLGILLIAALGALVAVLITSLSTGLRNRRAFYSALAMAVLGAALWYPLQYVLTV SAPWWITIVLIVAFVVVGVVVGYVVGQNDKPIVARGAGITGGLVALLIIVDRVMQVWP DYATNTRGRPIATVGAVTPGLNGSVWQGMLDSYTHLLLPTIAILLISVASYSRYSRAS LLEVMNQDYVRTARAKGLTERTVIMRHAFRNAMIPVATVIAFDVGGLIGGAVITETIF AWKGMGSVFQDALNKTDLNPLMGFILITSILTVIFNMLADILYSVLDPRIRVS" sig_peptide complement(2353034..2353105) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /note="Signal peptide predicted for CMS2216 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.269 between residues 24 and 25" misc_feature complement(2353040..2353621) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.7e-30" misc_feature complement(order(2353058..2353126,2353211..2353279, 2353379..2353447,2353556..2353624,2353643..2353711, 2353724..2353792,2353805..2353873,2353901..2353960, 2353979..2354047,2354075..2354143,2354180..2354248, 2354477..2354533)) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /note="12 probable transmembrane helices predicted for CMS2216 by TMHMM2.0 at aa 5-23, 100-122, 135-157, 167-189,196-215, 225-247, 252-274, 279-301, 308-330, 367-389,423-445 and 474-496" misc_feature complement(2353280..2353366) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." misc_feature complement(2353784..2354263) /locus_tag="CMS_2216" /old_locus_tag="CMS2216" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.0041" gene complement(2354740..2356581) /locus_tag="CMS_2217" /old_locus_tag="CMS2217" /pseudo /db_xref="GeneID:6157851" misc_feature complement(2355181..2356395) /locus_tag="CMS_2217" /old_locus_tag="CMS2217" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 7.6e-06" /pseudo misc_feature complement(2356513..2356545) /locus_tag="CMS_2217" /old_locus_tag="CMS2217" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." /pseudo gene 2356871..2357686 /locus_tag="CMS_2219" /old_locus_tag="CMS2219" /db_xref="GeneID:6157852" CDS 2356871..2357686 /locus_tag="CMS_2219" /old_locus_tag="CMS2219" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710895.1" /db_xref="GI:170782562" /db_xref="GeneID:6157852" /translation="MPDAPAIPRAPRPPLERATRTRLRWEIAIVLGLSLGASAVYSVL RIVDLSTRQEALGSQSATINRSLNDRQAFDLLYQLLDIATALVPVALVLFLLWQPGRS AFRRIGFDLASPGRDVAAGFGLAALIGVPGLGLYFAGRALGITVDVVPTALDSYWWTV PVLVLVALRAALQEEVIVVGYLFTRLRELGWGHGRIGMWTVILAAAVLRGSYHLYQGY GPFFGNVAMGVVFGWCYVRFGRTAPLVVAHLILDVVSFVGYPVALALLPGLFG" misc_feature order(2356949..2357017,2357093..2357161,2357222..2357290, 2357333..2357386,2357441..2357509,2357519..2357587, 2357600..2357668) /locus_tag="CMS_2219" /old_locus_tag="CMS2219" /note="7 probable transmembrane helices predicted for CMS2219 by TMHMM2.0 at aa 27-49, 75-97, 118-140, 155-172,191-213, 217-239 and 244-266" misc_feature 2357351..2357647 /locus_tag="CMS_2219" /old_locus_tag="CMS2219" /inference="protein motif:HMMPfam:PF02517" /note="HMMPfam hit to PF02517, Abortive infection protein,score 9.2e-05" gene 2357794..2358201 /locus_tag="CMS_2220" /old_locus_tag="CMS2220" /db_xref="GeneID:6157853" CDS 2357794..2358201 /locus_tag="CMS_2220" /old_locus_tag="CMS2220" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710896.1" /db_xref="GI:170782563" /db_xref="GeneID:6157853" /translation="MGDAAHPTGDPRPAIDYLEVEDSARFRELKRAHRSFVFPLAVAF LVWYFAFVLLSDYAHDFMSTPVIGNVNLGILLGLGQFVTTFAITTWYVSRANSRFDPI AAEIRADLEERERVALEGPRGSTTPKRRKGGRR" misc_feature 2357794..2358129 /locus_tag="CMS_2220" /old_locus_tag="CMS2220" /inference="protein motif:HMMPfam:PF04341" /note="HMMPfam hit to PF04341, Protein of unknown function DUF485, score 4.9e-43" misc_feature order(2357899..2357958,2358001..2358069) /locus_tag="CMS_2220" /old_locus_tag="CMS2220" /note="2 probable transmembrane helices predicted for CMS2220 by TMHMM2.0 at aa 36-55 and 70-92" gene 2358198..2359820 /locus_tag="CMS_2221" /old_locus_tag="CMS2221" /db_xref="GeneID:6157854" CDS 2358198..2359820 /locus_tag="CMS_2221" /old_locus_tag="CMS2221" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710897.1" /db_xref="GI:170782564" /db_xref="GeneID:6157854" /translation="MIAPGTAAMATTPTTDTGDPVLNISIFGAFVVVTLVIVFRASRN NSTAADYYAAGRSFTGPQNGTAIAGDYLSAASFLGIVGAIAINGYDGFLYSIGFLVAW LVALLLVAELMRNTGKFTMADVLSFRLKQRPVRLAAATTTLAVCFFYLLAQMAGAGGL VSLLLGIDDRLGQSLVIAVVGALMIVYVLVGGMKGTTWVQIIKACLLIAGAAVMTVWV LAIHGFDVSDLLGAAAAAADKPVLEPGNQYGATGITKLDFLSLALALVLGTAGLPHVL MRFYTVPTAKEARRSVVWAIWLIGIFYLFTLVLGYGAGALLGSERILAAPGGVNSAAP LLALELGGPILLGIIAAVAFATILAVVAGLTITAAASFAHDVYGSVIKKGQVSANGEV RVARITVVVIGLVSILAGIGANGQNVAFLVALAFAVAASANLPTILYSLYWRRFSTRG AVLSMYGGLGTALVLIAFSPVVSGAETSMIPGADFSWFPLSNPGIVSIPVGFLLGWIG TVTSTRKEDPLVAAEMDVRSLTGHGAEKATEH" misc_feature order(2358255..2358323,2358387..2358455,2358468..2358536, 2358594..2358662,2358705..2358773,2358792..2358860, 2358969..2359037,2359074..2359142,2359227..2359295, 2359371..2359430,2359458..2359526,2359545..2359613, 2359656..2359724) /locus_tag="CMS_2221" /old_locus_tag="CMS2221" /note="13 probable transmembrane helices predicted for CMS2221 by TMHMM2.0 at aa 20-42, 64-86, 91-113, 133-155,170-192, 199-221, 258-280, 293-315, 344-366, 392-411,421-443, 450-472 and 487-509" misc_feature 2358348..2359571 /locus_tag="CMS_2221" /old_locus_tag="CMS2221" /inference="protein motif:HMMPfam:PF00474" /note="HMMPfam hit to PF00474, Na+/solute symporter, score 5.4e-101" gene complement(2359921..2362896) /gene="gcvP" /locus_tag="CMS_2222" /old_locus_tag="CMS2222" /db_xref="GeneID:6157855" CDS complement(2359921..2362896) /gene="gcvP" /locus_tag="CMS_2222" /old_locus_tag="CMS2222" /EC_number="1.4.4.2" /note="acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase" /protein_id="YP_001710898.1" /db_xref="GI:170782565" /db_xref="GeneID:6157855" /translation="MTAVDAGTRPAAPAPDAAPDIASESSTFAPGAFGARHIGIDSEA RATMLGVLGHDSIPSLLAKAVPETIQVDRFRTDGDSVLPEAATERDALAELRRIAGRN RVRTSMIGLGYHDTITPAVITRNVLENPSWYTAYTPYQPEISQGRLEALINFQTMVAE LCWLATANASMLDEATAVVEGMLLARRASKAKTNVFLIDADALPQTRALLDSRAAALG IELIAHDLATVDPAGLPDAFGAFIQYPGASGRVWDPSAVIARVHAAGGLAVVAADLLA LTVITSPGELGADIAVGTSQRFGVPMGFGGPHAGYLAVRAGLERQMPGRLVGVSQDAA GHPAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPKGLRVIARQANRG ARRLVRSLATVGVEPIQAAFFDTVRVSVPGRADEILAAAAEGGVNLLRVDGDTLGFSV DEATRPEDLAVVARAFGAELAEDEGAHGDLSSIPEQSIRTSEYLTHAVFSTHRSETGM MRYLKRLSDKDYALDRGMIPLGSCTMKLNAATEMEAVTWPEFQAIHPFAPADDVEGYL ELVLQLETWLADVTGYDTVSLQPNAGSQGELAGLLAIRGYHLANGDDARTVCLIPQSA HGTNAASAVLAGMRVVVVACDELGNVDLDDLRAKIAAHRDELAGLMITYPSTHGVYEH EVGAICEAVHEAGGQVYVDGANLNALLGFARFGDFGGDVSHLNLHKTFCIPHGGGGPG VGPVAAKAHLAPFLPGHPQAQRNVHALVQDGVVSTIEHGGAPVSAAPYGSPSILPISW AYVRMMCAEGLKQATGAAVLSANYIAARLRDHYPVLYAGEDGLVAHECILDLRPLTAA TGITVDDVAKRLVDYGFHAPTMSFPVPGTLMVEPTESEDLAEVERFIAAMIGIKQEAD SVAAGEWPADDNPLRNAPHTAESVIAGEWTHAYTRERAVYPVSTLVRDKYWPPVRRID QAYGDRNLFCACPPPEAFA" misc_feature complement(2361499..2362794) /gene="gcvP" /locus_tag="CMS_2222" /old_locus_tag="CMS2222" /inference="protein motif:HMMPfam:PF02347" /note="HMMPfam hit to PF02347, Glycine cleavage system P-protein, score 3.7e-206" gene complement(2362893..2363264) /gene="gcvH" /locus_tag="CMS_2223" /old_locus_tag="CMS2223" /db_xref="GeneID:6158714" CDS complement(2362893..2363264) /gene="gcvH" /locus_tag="CMS_2223" /old_locus_tag="CMS2223" /note="part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor" /codon_start=1 /transl_table=11 /product="glycine cleavage system protein H" /protein_id="YP_001710899.1" /db_xref="GI:170782566" /db_xref="GeneID:6158714" /translation="MTDQTSLQYTAEHEWVLIDGDVATVGITSYAADKLGDVVFVELP AVGDELAGGSVVGEIESTKSVGELFAPIDGTVTEVNDDVVASPDLVNSDPFGAGWLVK VRFEALPTLLSHDEYVALVGE" misc_feature complement(2362896..2363246) /gene="gcvH" /locus_tag="CMS_2223" /old_locus_tag="CMS2223" /inference="protein motif:HMMPfam:PF01597" /note="HMMPfam hit to PF01597, Glycine cleavage H-protein,score 1.7e-46" misc_feature complement(2363037..2363126) /gene="gcvH" /locus_tag="CMS_2223" /old_locus_tag="CMS2223" /note="PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site." gene complement(2363261..2364460) /gene="gcvT" /locus_tag="CMS_2224" /old_locus_tag="CMS2224" /db_xref="GeneID:6158713" CDS complement(2363261..2364460) /gene="gcvT" /locus_tag="CMS_2224" /old_locus_tag="CMS2224" /EC_number="2.1.2.10" /codon_start=1 /transl_table=11 /product="glycine cleavage system T protein" /protein_id="YP_001710900.1" /db_xref="GI:170782567" /db_xref="GeneID:6158713" /translation="MTDAPAPDPEVRRSPLHAVHEAAGASFTDFAGWLMPVRYTSDLA EHRAVREAAGIFDISHMAEIAVEGEGAAAFLDSVLAGKLSAIAEWQAKYTLLLDPSGG IVDDLIVYRTGEESFLVVANAGNHDPVIAVLAEAAEGLDDVEVDDASDDVALIAVQGP VSRAILEATAGLETESPLEALRYYRATAARFAGQDVLVARTGYTGEDGYELYVATEDA VALWEALVAAGTPLGLLPTGLACRDTLRLEAGMPLYGHELGLHTLPGQAGLGKVVALA KEGDFRGRAAVEKGPDPVARVLVGLVTEGRRAPRADYPVYAEEAAGDSAAALEAVMEA TEGAVPPVGIVTSGALSPTLGHPVAMAYVDPSLAAPGTRLAVDVRGTRVPATVVTLPF YSRKAIR" misc_feature complement(2363276..2364298) /gene="gcvT" /locus_tag="CMS_2224" /old_locus_tag="CMS2224" /inference="protein motif:HMMPfam:PF01571" /note="HMMPfam hit to PF01571, Glycine cleavage T protein (aminomethyl transferase), score 2.4e-96" misc_feature complement(2364095..2364460) /gene="gcvT" /locus_tag="CMS_2224" /old_locus_tag="CMS2224" /note="PS00430 TonB-dependent receptor proteins signature 1." gene complement(2364830..2365285) /locus_tag="CMS_2225" /old_locus_tag="CMS2225" /db_xref="GeneID:6158715" CDS complement(2364830..2365285) /locus_tag="CMS_2225" /old_locus_tag="CMS2225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710901.1" /db_xref="GI:170782568" /db_xref="GeneID:6158715" /translation="MTDSQDREPTPLEQAIARGQAGESDMTAVLTEFINTTVVVPTAT PLTPETDQLQPVLFDRDGVPMLAAFTHEDRIDEKVTSVADHVATIPAAELVQAIPEGT GLVINVGTTDGFEMMPEGVAQLADDVRRVIDQDEDAAPQAPVAPSPDAI" gene 2365413..2365784 /locus_tag="CMS_2226" /old_locus_tag="CMS2226" /db_xref="GeneID:6157856" CDS 2365413..2365784 /locus_tag="CMS_2226" /old_locus_tag="CMS2226" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710902.1" /db_xref="GI:170782569" /db_xref="GeneID:6157856" /translation="MSIGRQRPRGELEAAIMDALWDADEPLTAKDVVARIPDPRPALT TVLTVLERLGQKGLVTRSDEARALTFAPARSRTDHAASLMSGALAATKDREAALLRFA GTLDGDDLTALRRALGGDDRA" gene complement(2365808..2366770) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /db_xref="GeneID:6157857" CDS complement(2365808..2366770) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710903.1" /db_xref="GI:170782570" /db_xref="GeneID:6157857" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2365820..2366362) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 6.7e-38" misc_feature complement(2366447..2366512) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2366512..2366633) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2366633..2366698) /locus_tag="CMS_2227" /old_locus_tag="CMS2227" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2366895..2367608) /locus_tag="CMS_2228" /old_locus_tag="CMS2228" /db_xref="GeneID:6157858" CDS complement(2366895..2367608) /locus_tag="CMS_2228" /old_locus_tag="CMS2228" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710904.1" /db_xref="GI:170782571" /db_xref="GeneID:6157858" /translation="MAALDGVRPDEVHVVRVFADAHGAHGNELGIVLASPRTDGREQA IAQALGFSETVFVDEVDAPGADPLGAAIRILTPARELPFAGHPTVGTAWWLASRGIDV DHLRVPAGVVDVTADPAWGPDFAWQELPSVADLLALDLQAAVADATAADARVDHLYAW AWIDEAAGTIRARMSAPALGVLEDEATGSAALRVTARLGRDLRITQGRGSELATRLLD DGRAEVGGRTVPDRVIPLP" misc_feature complement(2366907..2367584) /locus_tag="CMS_2228" /old_locus_tag="CMS2228" /inference="protein motif:HMMPfam:PF02567" /note="HMMPfam hit to PF02567, Phenazine biosynthesis PhzC/PhzF protein, score 8e-38" misc_feature complement(2367333..2367365) /locus_tag="CMS_2228" /old_locus_tag="CMS2228" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." gene complement(2367620..2368420) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /db_xref="GeneID:6157859" CDS complement(2367620..2368420) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /note="contains 3x internal repeat" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710905.1" /db_xref="GI:170782572" /db_xref="GeneID:6157859" /translation="MSATGAASSLQRSPGFAVAARLGHAVNGLLHLLIGVVAFRLATG GGGGEADQSGALGSIAGSPGGRVLLWIVVVGLLGLGLWQLVETVLARGEDAKRTWAVR AKELGKAVAYLAIAATALRFATGGSSDSSEQTQSLSARVLAAPGGVALLVVLGLAVVA VGVYFGFKGATKRFQEDISVPSGSLGRGITALGVAGYIAKGVALVAVGVLFVIGAVTA DPSRATGLDGALQSLAGLPAGVAVLAITGLGLIAYGLYCGARARYAKL" misc_feature complement(2367623..2367841) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /inference="protein motif:HMMPfam:PF06724" /note="HMMPfam hit to PF06724, Protein of unknown function DUF1206, score 1.3e-14" misc_feature complement(order(2367656..2367724,2367767..2367835, 2367920..2367988,2368046..2368105,2368166..2368234, 2368292..2368360)) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /note="6 probable transmembrane helices predicted for CMS2229 by TMHMM2.0 at aa 21-43, 63-85, 106-125, 145-167,196-218 and 233-255" misc_feature complement(2367899..2368117) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /inference="protein motif:HMMPfam:PF06724" /note="HMMPfam hit to PF06724, Protein of unknown function DUF1206, score 5e-12" misc_feature complement(2368145..2368360) /locus_tag="CMS_2229" /old_locus_tag="CMS2229" /inference="protein motif:HMMPfam:PF06724" /note="HMMPfam hit to PF06724, Protein of unknown function DUF1206, score 8.3e-15" gene complement(2368417..2369565) /locus_tag="CMS_2230" /old_locus_tag="CMS2230" /db_xref="GeneID:6157860" CDS complement(2368417..2369565) /locus_tag="CMS_2230" /old_locus_tag="CMS2230" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710906.1" /db_xref="GI:170782573" /db_xref="GeneID:6157860" /translation="MTTPQSVWQDKLGRLSIRCVQILAVLVVAIAIVYAAISLKLVVI PVIIALILACAVRPMVLWMERRGVPDALAAVIALLTGLVLFGGAVTAVVFGVQSQWPT LVKATSEGVDQLQAFIEEGGLPIDSAQIDSLRQSAVDFLTSSQFGSGAIAGVSAAAEV VTGAVLGLVVFFFFVKDGPQIWAFFIRPFRGRGRKRAVRVGHEGSKVLGGYIRGTATV ALVDTVFIGAGLFILGVPLALPLSLVVFIGAFVPIVGATVAGILAALVALVTNDLGTA IWVVAIVILVNQLEGNLLQPVVLGNALKLHGLVVLLALTAGTILGGIIGAILSVPLTA VAWTAWKIIMEPDEEEPEPPAPAPLEPVKKVARGLTAKLTGRTSTASR" misc_feature complement(2368534..2369508) /locus_tag="CMS_2230" /old_locus_tag="CMS2230" /inference="protein motif:HMMPfam:PF01594" /note="HMMPfam hit to PF01594, Protein of unknown function UPF0118, score 1.9e-55" misc_feature complement(order(2368576..2368644,2368672..2368740, 2368759..2368827,2368855..2368923,2369041..2369109, 2369278..2369346,2369383..2369442,2369455..2369508)) /locus_tag="CMS_2230" /old_locus_tag="CMS2230" /note="8 probable transmembrane helices predicted for CMS2230 by TMHMM2.0 at aa 20-37, 42-61, 74-96, 153-175,215-237, 247-269, 276-298 and 308-330" gene 2369628..2370227 /locus_tag="CMS_2231" /old_locus_tag="CMS2231" /db_xref="GeneID:6157861" CDS 2369628..2370227 /locus_tag="CMS_2231" /old_locus_tag="CMS2231" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001710907.1" /db_xref="GI:170782574" /db_xref="GeneID:6157861" /translation="MTGRYPRSMGPRLSVVREGALDVADHTSIAALLALAFPDFREGY AGARSWAGAQPELRILVHDGDELMAHAGIRRLFVEFGDGQGDPADDLLMGSTGMVAVH PERQGQGLGTLLADGIRGALARLAVPFGLLETGDETTGYYARHGWIPLPGRTGHYNGF TLLGAAGVVHQDHGWMMLPVTAAADAFPAGDLHVNGQLV" misc_feature 2369802..2370071 /locus_tag="CMS_2231" /old_locus_tag="CMS2231" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 9.1e-05" gene 2370242..2370772 /locus_tag="CMS_2232" /old_locus_tag="CMS2232" /db_xref="GeneID:6157862" CDS 2370242..2370772 /locus_tag="CMS_2232" /old_locus_tag="CMS2232" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001710908.1" /db_xref="GI:170782575" /db_xref="GeneID:6157862" /translation="MIHRLRTEDWREYRALRLEMLEDTPLAYLETLESARALPDSDWQ ARTRRANQLGSTAYVAVEPATCRWLGAMNAFVAADPTRVMLVSVYIAPDARGRAAGVT DMLLDAVIAWARDRPNAQALRLEVHEDNPRARAYYERRGFRLTGRSVPYALDRMQKDL EMELPLSGDTQRAAAP" misc_feature 2370419..2370670 /locus_tag="CMS_2232" /old_locus_tag="CMS2232" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.8e-08" gene complement(2370858..2371862) /locus_tag="CMS_2233" /old_locus_tag="CMS2233" /db_xref="GeneID:6157863" CDS complement(2370858..2371862) /locus_tag="CMS_2233" /old_locus_tag="CMS2233" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710909.1" /db_xref="GI:170782576" /db_xref="GeneID:6157863" /translation="MMAPATCSTLLGSAACAALALTLLGSAGAATAATARPADILQHV IPSSSASAAATGWTTARMHAAVPSAFVDDDPVDGDPPTTDEDVPAALDTSAVSADAAL PSAAETIPVPGFSANDHLGVVFFRSGGVDQRSTGNVVVSASGDLVTTSGRSVSALKGA FVTDLVFVPQYDGTAPKGIWPATVVTVKSQWVTDRAVDFDTAFFRVQAPAGSAAGTTL SSVVGASGVRFAGQQDDEDYRSTGYALDGGHDGTKPVSVESSVEPNPWMNKDYAIEGI ETELRAGISGSPWVNTDDDSGDVQRGMTTFAYKRFTHAAFGPQWTGALHAVFQVAAAS" sig_peptide complement(2370858..2370944) /locus_tag="CMS_2233" /old_locus_tag="CMS2233" /note="Signal peptide predicted for CMS2233 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.299 between residues 38 and 39" misc_feature complement(2371629..2371649) /locus_tag="CMS_2233" /old_locus_tag="CMS2233" /note="PS00387 Inorganic pyrophosphatase signature." misc_feature complement(2371764..2371832) /locus_tag="CMS_2233" /old_locus_tag="CMS2233" /note="1 probable transmembrane helix predicted for CMS2233 by TMHMM2.0 at aa 20-42" gene 2372070..2372933 /locus_tag="CMS_2234" /old_locus_tag="CMS2234" /db_xref="GeneID:6157864" CDS 2372070..2372933 /locus_tag="CMS_2234" /old_locus_tag="CMS2234" /codon_start=1 /transl_table=11 /product="putative secreted pectate lyase" /protein_id="YP_001710910.1" /db_xref="GI:170782577" /db_xref="GeneID:6157864" /translation="MPPPFPASARLQATRPFRGRLGAVAAVTAVALLALGLSLPQTAP AQAAGLPARGSSISDMPAFPTPTHVAPAQSMPFLVKAGQTVDFHNQELNASTNGHGEF QEPVVLIEPGGIAENLIIGPLAGDGIHCQASCTLINIWWPHVGEDAVTLLDGSPASSV VTIRGGAVAHAYDKVVQLDGAGTARFSDFAASDIGTLARSCGNCPNQYTRHIVISNVF ITGGKYKVAGVNQNFGDTATLDHVTIHGVHMQVCDRTIGGRGTAAKPVPGAGGPFPPY CVFDPGTILYS" sig_peptide 2372070..2372210 /locus_tag="CMS_2234" /old_locus_tag="CMS2234" /note="Signal peptide predicted for CMS2234 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.876 between residues 47 and 48" misc_feature 2372130..2372198 /locus_tag="CMS_2234" /old_locus_tag="CMS2234" /note="1 probable transmembrane helix predicted for CMS2234 by TMHMM2.0 at aa 21-43" misc_feature 2372232..2372876 /locus_tag="CMS_2234" /old_locus_tag="CMS2234" /inference="protein motif:HMMPfam:PF03211" /note="HMMPfam hit to PF03211, Pectate lyase, score 5.4e-36" gene complement(2373013..2374542) /gene="katA" /locus_tag="CMS_2235" /old_locus_tag="CMS2235" /db_xref="GeneID:6157865" CDS complement(2373013..2374542) /gene="katA" /locus_tag="CMS_2235" /old_locus_tag="CMS2235" /EC_number="1.11.1.6" /codon_start=1 /transl_table=11 /product="catalase" /protein_id="YP_001710911.1" /db_xref="GI:170782578" /db_xref="GeneID:6157865" /translation="MTDQKYTTTDSGAPVASDEHSLSVGPDGAIPLHDHYLVEKLAQF NRERIPERVVHAKGGGAFGTFRVTGDVSAYTRASLFQPGAEVEMLARFSTVAGEQGSP DTWRDPRGFALKFYTDEGNYDLVGNNTPVFFIRDGIKFPDFIRSQKRLPGSHLRDHDM QWDFWTLSPESAHQVTWLMGDRGLPSSWRHMDGFGSHTYQWINAAGERFWVKYHFKTQ QGIEILKQEQADQIAGEDADFHIRDLTEAIDRGDHPEWKLEVQIMPYEEAKSYRFNPF DLTKVWSQKDYPRIEVGTMALNRNPENYFAQIEQAAFAPSNFVPGIQTSPDKMLLARI FSYADAHRYRVGTNHAQLPVNAPKSPVHSYSKDGQGRYTFQDAGTPVYAPNSHGGAHA DPARAAESAGWEQDGELVRAAATLHAEDDDFVQARMLVNESMDDAQRERLVGNIVGHV SKVTTAELRARVIQYWTNVDGWLGEAVAAGLPPLAGDAPVAEATPGPTRDAEEVGVAA H" misc_feature complement(2373370..2374521) /gene="katA" /locus_tag="CMS_2235" /old_locus_tag="CMS2235" /inference="protein motif:HMMPfam:PF00199" /note="HMMPfam hit to PF00199, Catalase, score 4.9e-264" misc_feature complement(2373520..2373546) /gene="katA" /locus_tag="CMS_2235" /old_locus_tag="CMS2235" /note="PS00437 Catalase proximal heme-ligand signature." misc_feature complement(2374363..2374413) /gene="katA" /locus_tag="CMS_2235" /old_locus_tag="CMS2235" /note="PS00438 Catalase proximal active site signature." gene complement(2374619..2375110) /locus_tag="CMS_2236" /old_locus_tag="CMS2236" /db_xref="GeneID:6158779" CDS complement(2374619..2375110) /locus_tag="CMS_2236" /old_locus_tag="CMS2236" /codon_start=1 /transl_table=11 /product="putative ferric uptake regulation protein" /protein_id="YP_001710912.1" /db_xref="GI:170782579" /db_xref="GeneID:6158779" /translation="MCLTAAMPTDHAPPLDADALRAALKEAGLRVTRPRVAVLTAVDA APHSDADEVLRAVKGELPGTSIQAVYGVLGALAAAGLVRRIEPAGSSARYERRTGDNH HHLVCTGCRTIVDVDCAVGESPCLAPSDSAGFLVASAEVTYWGLCPECRTAAADPGPT VAT" misc_feature complement(2374679..2375035) /locus_tag="CMS_2236" /old_locus_tag="CMS2236" /inference="protein motif:HMMPfam:PF01475" /note="HMMPfam hit to PF01475, Ferric-uptake regulator,score 2.2e-14" gene 2375217..2376206 /locus_tag="CMS_2237" /old_locus_tag="CMS2237" /db_xref="GeneID:6157866" CDS 2375217..2376206 /locus_tag="CMS_2237" /old_locus_tag="CMS2237" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710913.1" /db_xref="GI:170782580" /db_xref="GeneID:6157866" /translation="MKHIHTGTGLDVGRIGLGCMGMSAFYDGAGQDEAESIRTLNRAV DQGITLFDTAEAYGPFTNERLVGSALAGRRDDIVIATKFGLLKHAPGKDAEDYERGMD SSPTSIRIAVEASLQRLGTDRIDVLYQHRVDPAVPIEETVGAMKELVDEGKVLHLGLS EAGPDTIRRAHAVHPISVLQSEYSIWTRDPEGPVLDVLRELGIGPVAYSPLGRGFLTG AISSIADLSEADYRSSSPRFAQEAFAQNMRIVDAVKDVAGELDATPAQVALAWILAQG DDIAVIPGTKRVTRLDENLAADTVRLTPEQLTRISSLPTPAGDRYADMSAIDR" misc_feature 2375244..2376161 /locus_tag="CMS_2237" /old_locus_tag="CMS2237" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 2.2e-63" gene 2376352..2377896 /locus_tag="CMS_2238" /old_locus_tag="CMS2238" /db_xref="GeneID:6157867" CDS 2376352..2377896 /locus_tag="CMS_2238" /old_locus_tag="CMS2238" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710914.1" /db_xref="GI:170782581" /db_xref="GeneID:6157867" /translation="MTSLSIRTPHSTGSSSAPGRTISGTADPLLLLAALDAAARELGL VQLPGDPPGADGPDAIARVWRDAAGGEVRVVTAFGQLAPRSLLPATPRSRSFHATLHA DAPEVADALHDSIRIHDRCLSEEEQTAVVDAMPMLGWAVHAHPFPAGGWRVVFRDHLV ENSLGLVRALLASGLRPEDAIVLDKGDQTLNRVRIAATLRALGVNVRRLDNSAVDGTA PAGEAARAVESARAVDRFIADAHGSGQRVVMVDDGGLLGLTDHRGDPVLRERPDAAVE LTVSGLKRLARSPLARDLPVANMARSEVKQRIGYDEIADSCLRRLREALRGEKLIGKR VVSVGFGTLGARMARGLRSLGCRVVVVDTDHLQLIAAAEDGFETTPSIHEAVAMQPTL LISSTGEPIADAATLASLPSTSYVTAFATADLSALRDHHVAGGPTVLGDGRSFNLHRF EGIPNGGYDLYRAATYIVLGRLAERVDAEPDARVQLADVDAWVRGSGLYARYYEHHFQ EGRTCA" gene 2377893..2378924 /locus_tag="CMS_2239" /old_locus_tag="CMS2239" /db_xref="GeneID:6157868" CDS 2377893..2378924 /locus_tag="CMS_2239" /old_locus_tag="CMS2239" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710915.1" /db_xref="GI:170782582" /db_xref="GeneID:6157868" /translation="MTVVGGGRIGRLRAALLVGMGHDAEIVDPQLDPRAEPFLVHPDV ASAPGAPAVWIVATPTSTHLRIIREIVAREPAAAVLVEKPVCSPEDLPALLSLLAEHP DLVLEVASQYQDSIAIRALGHEARIRPHHALSVSFVKDRRPDEARGRFTDWVAGVLGY EWPHIYAIARSLGVAGDDLRETAPGRSALDLADVDGYLVEARYATTSGSGRDVTLHSR IAGASELVPADGWGEARCDPANHRVVRLDDGRERITLWLAPSYASSTTFPSAQTALLV HEGPDGHRVRDIPDDPLRISMRDSLLRLVIRRPRRMDVDLDMIEHTDLLLELGSPPTP ELSGTHAFR" gene 2378911..2379918 /locus_tag="CMS_2240" /old_locus_tag="CMS2240" /db_xref="GeneID:6157869" CDS 2378911..2379918 /locus_tag="CMS_2240" /old_locus_tag="CMS2240" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710916.1" /db_xref="GI:170782583" /db_xref="GeneID:6157869" /translation="MRSADVALLGYGAMGRAYHRLLRTHPDLVPLVGRLHVGSRRAPE PWEPLDDRDAVGTLDDALAEGPPAVIIATPPPTHEALAHRALDLGAHVLVEKPAALTG DGIRALNRHADAAGRSVQVVSQLRQVAAWGRARDRIRAGALGIVRSALVDIPLWRSDA YFAASPARSEHELANLAYHELDLAIWCLGPVDGVTVVPAHVGAGEDRATRHPPFTAVL EQASGCLTTLRYTTRAFPGRAPRVTIDGTAGSLVLESGAAVVDLAPPAVDVPDAGLYA RQTSVPEVDPDWLAPHAAQLRGFLADPSRTSPRRIDETSVRTTDLIHRIQRHLNREEP A" misc_feature 2378920..2379279 /locus_tag="CMS_2240" /old_locus_tag="CMS2240" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 5.5e-11" gene 2379915..2381177 /locus_tag="CMS_2241" /old_locus_tag="CMS2241" /db_xref="GeneID:6157870" CDS 2379915..2381177 /locus_tag="CMS_2241" /old_locus_tag="CMS2241" /codon_start=1 /transl_table=11 /product="radical SAM domain-containing protein" /protein_id="YP_001710917.1" /db_xref="GI:170782584" /db_xref="GeneID:6157870" /translation="MTHVMFTIVEDEFSRDFLQHPLDALIAASVLARDGHDVAIWDQR VAKIPPTGLDPAYVVVVTAIADRAQCYPLDLAPVRRSVEGIRDRWPQARVIAVGPHGT QLPQPTLEDLGVDYVARGEADAAAIGAVALLEEGGAPLSRVLPFSGRFAPLSAEEMPV PDYDLIDASAYTAETFTDGSLHRSTCGIVLGVRGCTYGCSFCHLPFGTRMRAEPVETT LATIEQQTSRGVSDIFFLDYVFGLHRSFYTDLCREMTGRGVSWTGQTRTEVVLRTDVT TWAEAGCRGMWLGAESPAVSETGVGKRIPAEKIQQAIEKLSHAGITPFAFVLLGLPDD PTCRSGEIVDWAATIPGYFGLNQLFLRPGTPLYDEIAARYSPDGPPRDWYGVDRITQR YRQEYPADLDDLERRLQALPNYIGNALY" misc_feature 2380479..2380952 /locus_tag="CMS_2241" /old_locus_tag="CMS2241" /inference="protein motif:HMMPfam:PF04055" /note="HMMPfam hit to PF04055, Radical SAM, score 1.7e-05" misc_feature 2380509..2380526 /locus_tag="CMS_2241" /old_locus_tag="CMS2241" /note="PS00190 Cytochrome c family heme-binding site signature." gene 2381177..2382364 /locus_tag="CMS_2242" /old_locus_tag="CMS2242" /db_xref="GeneID:6157871" CDS 2381177..2382364 /locus_tag="CMS_2242" /old_locus_tag="CMS2242" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710918.1" /db_xref="GI:170782585" /db_xref="GeneID:6157871" /translation="MPGHVLVTVPPASAHSYDHVGYAVDLVVAGAIAAACGDAGGAGP GATVAVTRDDHNIPAVAAGPPADLAHLRGMARSIVGRPVAIAGTGAPPIQDLARGVWS ELDARGVLESATYKRMQCPACRTLADTAGSVARCPTCGATGLVLRSERNWFLRTAPFQ EALGAWRDGVALRGPAVPLARAAPAAPARLSVSRAAERTGGAGVAVPGDADQVIHSGL VAACSYLLERPEGGWAAAGTRVQVCGKGLVNLHLTLVPLLCTVLGLPRADVIHVHHHV SVDGRSPQAASADGTTASRLLTDHGPAALRWWILRLGLPRRDAALRLRDLARLADREL PRLRAGSVAAHPPRLAALDALDLGGMTRALLAGPADGAPEDTAPGRAHDGIAGFVRWA TAP" gene 2382361..2383533 /locus_tag="CMS_2243" /old_locus_tag="CMS2243" /db_xref="GeneID:6157872" CDS 2382361..2383533 /locus_tag="CMS_2243" /old_locus_tag="CMS2243" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710919.1" /db_xref="GI:170782586" /db_xref="GeneID:6157872" /translation="MTPAVTRLSRRLLALLVLVRAAGFTSIVAVVWFRGQHATGEIAV ILTAFGVGSVLLPAAAGLLLGERPLRPVLVATLVLNGAALMLLPLTAGASLALPTAAM FAIGASSSLARSLIGTLLTVAAPADRQARTQSIISWSANVGGVVATGIAGLVAASGSD LGPLFAVEGAVLLVAASLIPRAAAVTRAAPSGAPGIRGTVTRLRSALVLAAGATAVMQ GLGMQFALTTATPESYVYAALTNVVLLIVAQPVVLRVVRDASAPAYLVAGFAGAAVTA VAVAATDSWLVFGVAWTACELLLTAGMVPAILARTPASLHVAALGVVGSSWGLTAALM PPVIAAAVTAAGATGSWGVFVAIGVVASLGSALAIGLRPGARPTEGRDDREEPVLG" sig_peptide 2382361..2382480 /locus_tag="CMS_2243" /old_locus_tag="CMS2243" /note="Signal peptide predicted for CMS2243 by SignalP 2.0 HMM (Signal peptide probability 0.949) with cleavage site probability 0.240 between residues 40 and 41" misc_feature order(2382394..2382459,2382487..2382555,2382574..2382633, 2382661..2382729,2382766..2382834,2382847..2382915, 2382973..2383032,2383060..2383128,2383147..2383206, 2383216..2383284,2383309..2383377,2383405..2383473) /locus_tag="CMS_2243" /old_locus_tag="CMS2243" /note="12 probable transmembrane helices predicted for CMS2243 by TMHMM2.0 at aa 12-33, 43-65, 72-91, 101-123,136-158, 163-185, 205-224, 234-256, 263-282, 286-308,317-339 and 349-371" misc_feature 2382394..2383389 /locus_tag="CMS_2243" /old_locus_tag="CMS2243" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(2383540..2384379) /locus_tag="CMS_2244" /old_locus_tag="CMS2244" /db_xref="GeneID:6157873" CDS complement(2383540..2384379) /locus_tag="CMS_2244" /old_locus_tag="CMS2244" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710920.1" /db_xref="GI:170782587" /db_xref="GeneID:6157873" /translation="MKIALAQIISSPDPAENLARIGRFAEDAARQGAELVVFPEAAQR AFGNPLPEIAEPLDGPWASGVRAIAERLGVVIVAGMFTPGADGRVRNTLLVARPAGAP AEGASSYDKIHLFDAFGFRESDAVDPGDAVAVIQVGGTRASLATCYDVRFPALFLAGA DRGAVVSIVCASWGAGPGKADQWDLLLRARALDSTTFVVAVGQGDPATLEAGSRGHDP ASGAPTGIGRSAVVSPLGEVLHRLGGEEELLVVDIDPSAVEAARSTLPVLANRRRGLE QAV" misc_feature complement(2383864..2384376) /locus_tag="CMS_2244" /old_locus_tag="CMS2244" /inference="protein motif:HMMPfam:PF00795" /note="HMMPfam hit to PF00795, Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase, score 7.5e-38" gene 2384408..2385082 /locus_tag="CMS_2245" /old_locus_tag="CMS2245" /db_xref="GeneID:6157874" CDS 2384408..2385082 /locus_tag="CMS_2245" /old_locus_tag="CMS2245" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001710921.1" /db_xref="GI:170782588" /db_xref="GeneID:6157874" /translation="MRERAGDPGTSASALSGRERAYEFLHAHVLTDPDQQGAFLNEQE LAERIGVSRTPVREALLLLAADDLVEMIPKRGARIPVITGRQIAELMEFRGVLERHAA TSAVEHHRTPLDAMREVLEQQRAMVEEPPRESGRAFIEHDRRFHQLLVDAAGSELMSR TYAKLRARQILVGVEALYRATDRQDRVCEEHAGIVDALAAGDAQAARDAIDRHLAVTL DVLLRA" misc_feature 2384456..2384644 /locus_tag="CMS_2245" /old_locus_tag="CMS2245" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 6.4e-12" misc_feature 2384525..2384590 /locus_tag="CMS_2245" /old_locus_tag="CMS2245" /note="Predicted helix-turn-helix motif with score 1121.000, SD 3.00 at aa 40-61, sequence LNEQELAERIGVSRTPVREALL" misc_feature 2384672..2385055 /locus_tag="CMS_2245" /old_locus_tag="CMS2245" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 3.8e-19" gene complement(2385190..2386587) /locus_tag="CMS_2246" /old_locus_tag="CMS2246" /db_xref="GeneID:6157875" CDS complement(2385190..2386587) /locus_tag="CMS_2246" /old_locus_tag="CMS2246" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001710922.1" /db_xref="GI:170782589" /db_xref="GeneID:6157875" /translation="MADDPTASPATPAPASGAPAAPAATEKPTRRELVKAFTASLTGT SLEWYDFAVYSAASAVVFPVVFFPSSDPYTATILAFSTYAVGYVSRPVGGFVFGRLGD KIGRKPVLVLTLLLIGIATFLIGVLPGYATIGLAAPIILVLLRFAQGVGVGGEWGGAV LLSSEFGDPRKRGFWSSAAQVGPPAGNLLANGALALLTVLLTEEDFLDWGWRVAFLLS ALLVAFGLWIRLKLEDTPVFKALQERGDRPSAPVSEVFRTQMRPLVAAILSRVGPDVL YALFTVFTLTYGVNSLGFERSQVLVAVLVGSAVQLFTIPFAGAVSDRINRRALYAAAA VGAAVWAYVFFAITDGSSTFVLGVGIVLGLFFHSFMYGPQAAYIIEQFSPRLRYTGAS LAYTIAGVIGGAIAPLMFTIIYEETGSWVGIALYLTAAVVLTLVDLAMGRDSDASEDE EYVRTGAEGVAAARV" misc_feature complement(2385238..2386485) /locus_tag="CMS_2246" /old_locus_tag="CMS2246" /inference="protein motif:HMMPfam:PF00083" /note="HMMPfam hit to PF00083, General substrate transporter, score 2.4e-38" misc_feature complement(order(2385280..2385339,2385349..2385417, 2385451..2385519,2385547..2385606,2385625..2385693, 2385721..2385789,2385904..2385963,2386195..2386263, 2386297..2386365,2386378..2386437)) /locus_tag="CMS_2246" /old_locus_tag="CMS2246" /note="10 probable transmembrane helices predicted for CMS2246 by TMHMM2.0 at aa 86-105, 110-132, 144-166,244-263, 302-324, 334-356, 363-382, 392-414, 426-448 and 452-471" misc_feature complement(2385343..2386431) /locus_tag="CMS_2246" /old_locus_tag="CMS2246" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 2386753..2387436 /locus_tag="CMS_2247" /old_locus_tag="CMS2247" /db_xref="GeneID:6157876" CDS 2386753..2387436 /locus_tag="CMS_2247" /old_locus_tag="CMS2247" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710923.1" /db_xref="GI:170782590" /db_xref="GeneID:6157876" /translation="MTTLRFQLPDGSTPSVEVVSLLNAGYAGRDQAEVQAHIDELAEL GVPGPETTPALYPVAPYLASQADTVPAQHGRTSGEAEWALVVTDDDVLLTVACDHTDR ALEVHGVAWSKNAGPDVLGRKAWRLADVRDRLDAIRLRGWVGEEGAEELIQDSTLAAL LTPDHWLEVLAERGLRVPGTVLISGTVAMIPGVDQFASRWRVQLEDPATGETIDAAYR VQLLPEAIG" gene 2387532..2387924 /locus_tag="CMS_2248" /old_locus_tag="CMS2248" /db_xref="GeneID:6157877" CDS 2387532..2387924 /locus_tag="CMS_2248" /old_locus_tag="CMS2248" /note="Late stop compared to homologues" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710924.1" /db_xref="GI:170782591" /db_xref="GeneID:6157877" /translation="MPTIVVEVMPKAELLDPQGKAVAGALARLGKDRFTGVRIGKRFE LTVEGEVDDALLADVQSLAADMLSNSVIEDVISVHVAGLDGFGISAEADMSTGNVTDD HTIAEGGTADTDVAAHPLPHGSAAAEQR" gene 2387924..2388619 /gene="purQ" /locus_tag="CMS_2249" /old_locus_tag="CMS2249" /db_xref="GeneID:6157878" CDS 2387924..2388619 /gene="purQ" /locus_tag="CMS_2249" /old_locus_tag="CMS2249" /EC_number="6.3.5.3" /note="catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase I" /protein_id="YP_001710925.1" /db_xref="GI:170782592" /db_xref="GeneID:6157878" /translation="MRVGVITFPGSLDDRDAQRAVRLAGATPVALWHGDHDLQGVDAI VLPGGFSYGDYLRAGAIAAFAPIMREVVDAAERGVPVLGICNGFQMLTEAHLLPGGLI RNEAGNFVCRDQRLRVEATGTAWTSAFTAGEEITIPLKNGEGGFIADADTLDRLEGEG RVAFRYLGGNPNGSLRDIAGITNARGNVVGLMPHPEHAVEEGFGPDTPAAMRSGVDGL RLFTSVLEGVLAQ" misc_feature 2388023..2388532 /gene="purQ" /locus_tag="CMS_2249" /old_locus_tag="CMS2249" /inference="protein motif:HMMPfam:PF07685" /note="HMMPfam hit to PF07685, CobB/CobQ-like glutamine amidotransferase domain" misc_feature 2388161..2388196 /gene="purQ" /locus_tag="CMS_2249" /old_locus_tag="CMS2249" /note="PS00442 Glutamine amidotransferases class-I active site." gene 2388616..2390979 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /db_xref="GeneID:6158904" CDS 2388616..2390979 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /EC_number="6.3.5.3" /note="catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase II" /protein_id="YP_001710926.1" /db_xref="GI:170782593" /db_xref="GeneID:6158904" /translation="MSVHPDPASVPTETPAGEGRSLRRHVADTVEMAERTPEKEQPYA ALGLTEGEYLKIREILGRRPTSGELAMYSVMWSEHCSYKSSKKYLRQFGQKVSESMKK DLMVGMGENAGVVDVGEGWAVTFKIESHNHPSYIEPFQGAATGVGGIVRDIISMGARP VAVMDALRFGDIDDPDTARVVHGVVAGISFYGNCLGLPNIGGETYFDRVYQGNPLVNA LAVGVLRHEDLHLANARGVGNKVVLFGARTGGDGIGGASILASDTFADGGPTKRPAVQ VGDPFAEMVLIECCLELFAKDLVEGIQDLGAAGISCATSELASNGDGGMHIRLEEVLL RDPSLTAEEILMSESQERMMAVVKPEKLEGFLEVVRKWDVETSVLGEVTDTGRLVIDH HGERIVDVEPRTVAVDGPVYDRPVSYPTWIDALQADSASRLARPTAPDDIKAQFLQLL GSPNLADASWITDQYDRYVMGNTALSFPDDAGMVRVDEESGLGFSVATDANGRFCQLD PYRGAQLALAEAYRNVAASGATPVAVSDCLNFGSPEDPEVMWQFSRTVEGLADGCLEL EIPVTGGNVSLYNQTGTQAIHPTPVVGVLGVIDDVARRIPSGWQDEGDNIYLLGVTRE ELDGSAWAGSVHDHLGGVPPVVDLAAEKDLASLIAAGATQSLIASAHDLSDGGLGQAL AESVMRFGVGARVWLDGIVQRDGVDAATALFSESTGRMLVTVPREDDVKFQGLCEGRG YPVLRIGVTDAQAPGLELQGLFTLSVDELRGIHRATLPARFGTAVEA" misc_feature 2388826..2389290 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /inference="protein motif:HMMPfam:PF00586" /note="HMMPfam hit to PF00586, AIR synthase related protein, score 1.7e-49" misc_feature 2389321..2389794 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /inference="protein motif:HMMPfam:PF02769" /note="HMMPfam hit to PF02769, AIR synthase related protein, C-terminal, score 1.3e-37" misc_feature 2389936..2390412 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /inference="protein motif:HMMPfam:PF00586" /note="HMMPfam hit to PF00586, AIR synthase related protein, score 1.1e-37" misc_feature 2390446..2390892 /gene="purL" /locus_tag="CMS_2250" /old_locus_tag="CMS2250" /inference="protein motif:HMMPfam:PF02769" /note="HMMPfam hit to PF02769, AIR synthase related protein, C-terminal, score 3.7e-21" gene 2390976..2391779 /locus_tag="CMS_2251" /old_locus_tag="CMS2251" /db_xref="GeneID:6158901" CDS 2390976..2391779 /locus_tag="CMS_2251" /old_locus_tag="CMS2251" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001710927.1" /db_xref="GI:170782594" /db_xref="GeneID:6158901" /translation="MSMTDPASTPVWSPSLAELTERVPLPEGADIQMGPVLYDHEGTE LEGLLARDASQSGRRPAVLVIHDWFGVGGHVAARIQMLARLGYVAFAADVYGRDVRPG PEEAAEVAGAYYADLPLMRARVQAGIDRLAAEPDVDPSRIAVMGYCFGGSASLEVARA GAEIKAAISLHGSLVVHEPADVADVKAAILVLTGADDPMVPDERVAAFQDEMRTRPAI DWQVVTYSGAMHAFSVPGVDSPEHGAQYQDRAERRSWRALTDFLAEHLG" misc_feature 2391108..2391773 /locus_tag="CMS_2251" /old_locus_tag="CMS2251" /inference="protein motif:HMMPfam:PF01738" /note="HMMPfam hit to PF01738, Dienelactone hydrolase,score 6.6e-38" gene 2392285..2393079 /locus_tag="CMS_2252" /old_locus_tag="CMS2252" /db_xref="GeneID:6157879" CDS 2392285..2393079 /locus_tag="CMS_2252" /old_locus_tag="CMS2252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710928.1" /db_xref="GI:170782595" /db_xref="GeneID:6157879" /translation="MHVMTCNIRLARPSTEPGDPDHWADREPVLARFLQLEQPTVLGV QEALSAQLPAIARALPHHRMLGYGRDGGSGGEYSAIFYDERRLDVVAWDQFWLSDLPE LIGSRSWGCSTTRIATWARFRDRRSGAEFVHLNTHLDHESELARVKSADLITERLQEV ASGAPVVVTGDFNAPAEESAAYDILTRDAGLADTWTTAAHHATPGIGTFTAYGDPVPE GERIDWILAGDGVEVVDSAINPYTYEGRSPSDHAAVQALVRLARTA" misc_feature 2392285..2393058 /locus_tag="CMS_2252" /old_locus_tag="CMS2252" /inference="protein motif:HMMPfam:PF03372" /note="HMMPfam hit to PF03372,Endonuclease/exonuclease/phosphatase, score 2.1e-16" gene 2393280..2393996 /locus_tag="CMS_2253" /old_locus_tag="CMS2253" /db_xref="GeneID:6157880" CDS 2393280..2393996 /locus_tag="CMS_2253" /old_locus_tag="CMS2253" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710929.1" /db_xref="GI:170782596" /db_xref="GeneID:6157880" /translation="MPARRMARGAVSALAAVLLLAGCTSANPQPTPTTTEGAPEPSAS ASTAPEDLVRIVVMGDSNTNGFVGTLPQGIDQGMAYVDYVVGDPLTFAGGWGTDGATS TVMAANTPTVEDVDIALIMIGTNNRIAQVPDTQLDADILQTVEKLAPKDTVILAIPPQ NASPETPPEVNAHLEQFAEAQGYHFFNPWKNLTNKDMKWRSEFFRDGIHTNMKGYKLM GAEVRNYVRTEVLDDADAQK" sig_peptide 2393280..2393414 /locus_tag="CMS_2253" /old_locus_tag="CMS2253" /note="Signal peptide predicted for CMS2253 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.896 between residues 45 and 46" misc_feature 2393316..2393348 /locus_tag="CMS_2253" /old_locus_tag="CMS2253" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 2393442..2393945 /locus_tag="CMS_2253" /old_locus_tag="CMS2253" /inference="protein motif:HMMPfam:PF00657" /note="HMMPfam hit to PF00657, Lipolytic enzyme, G-D-S-L,score 2.4e-05" gene 2394100..2395125 /locus_tag="CMS_2254" /old_locus_tag="CMS2254" /db_xref="GeneID:6157881" CDS 2394100..2395125 /locus_tag="CMS_2254" /old_locus_tag="CMS2254" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001710930.1" /db_xref="GI:170782597" /db_xref="GeneID:6157881" /translation="MTVKSETGRKIEFLEAVRGVASFIVVLQHLIAAEYPAFEDFSRQ WIDAGRVGVVAFFLVSGYVIPLSLQRQDTRTFLVRRLYRLFPLYWLVLGLMMLWVATT GDGELGGPLVIMANVLMVQGAVGISTIVPTAWTLGIELIFYGRSLVAKLIGRLDRSVV MGYVWLAGFVAAAIAGRVLERELPWTLPLLLYTASLGHVIHLRDRDGSTAWRGLLVAG VVGVPLFTYLNGGQDAAWPPFDYAVSFLLGLGLFFAFYASRRAAHSRVLIWLGAISYA AYLLHPLAYRVVRALDVPEGIVRVAAAIAVTLVVSWLVHRFVEVPFIGVARRLTSRSS AARAPRS" misc_feature 2394130..2395074 /locus_tag="CMS_2254" /old_locus_tag="CMS2254" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 1.3e-15" misc_feature order(2394136..2394192,2394235..2394303,2394340..2394405, 2394463..2394531,2394568..2394636,2394646..2394705, 2394724..2394792,2394820..2394876,2394895..2394954, 2394985..2395053) /locus_tag="CMS_2254" /old_locus_tag="CMS2254" /note="10 probable transmembrane helices predicted for CMS2254 by TMHMM2.0 at aa 13-31, 46-68, 81-102, 122-144,157-179, 183-202, 209-231, 241-259, 266-285 and 296-318" gene complement(2395448..2397727) /locus_tag="CMS_2255" /old_locus_tag="CMS2255" /db_xref="GeneID:6157882" CDS complement(2395448..2397727) /locus_tag="CMS_2255" /old_locus_tag="CMS2255" /codon_start=1 /transl_table=11 /product="putative acyltransferase" /protein_id="YP_001710931.1" /db_xref="GI:170782598" /db_xref="GeneID:6157882" /translation="MSSQTFRRGTPALPDPSELRSAPDDKNPPAEGDSPAVNRGFRPD VEGLRALAVVAVIVDHLFDWPSGGFVGVDVFFVISGFLITGLLLKEYERTKTISFLDF YKRRVRRIMPATLLVLVVSTAVSFLVFNVVRAQASLWDAVWSALFVSNWHFASAGTDY FASDGPVSPFRHYWSLSVEEQFYLVWPVLIFLVITFARRRTPKNRVKRARLFTQTIGI TVGVLIVASLAWGFYETQARSTVAYFSTFSRAWELGIGALLAIFAARIATLPAAIRPV LGYVGLAGIIASFFLVSGDNAFPVPFGLLPVVATALVIASGIGGVSKAMVPITNPVTT YIGKLSFSLYLWHFPAIILLDSLIRDRTMYYAAAIGATLVLAIASFHLVEDPIRRSSW LDPKKAGRRSAGMQLKMTVAALSVVAVAVVGVVAVAVVRDDPSDQSQLGSGTPSTGGT AAPVEATGTALATRGEQITAALASDEWPALDPAVEAFGDFGRDVIAPEWAKEGCLGAD LAKEKDAIKNTEHCVYGNASAGPDKTAVIFGDSLAISYAPMLRASLGDEWKVRILTMA RCPASTVTSTDTDGSEYTECGDFRTWALNEMNATKPALVLMSEAVDNSYLSSKATGGA ADREWQAGALTTMNSLKTAASNVIVLSRPPAATALVECKTPTSSPNDCQSTVSPSFIS HARTMEAAATEVGAPVQFINTQGWFCSQGTCPAFVNGIPVRGDTSHLTARQSQDLAPI MSDVLAPLGIGAAPAPAAG" misc_feature complement(order(2396438..2396497,2396579..2396638, 2396666..2396734,2396771..2396839,2396849..2396902, 2396921..2396989,2397032..2397100,2397137..2397184, 2397332..2397400,2397461..2397529)) /locus_tag="CMS_2255" /old_locus_tag="CMS2255" /note="10 probable transmembrane helices predicted for CMS2255 by TMHMM2.0 at aa 31-53, 74-96, 146-161, 174-196,211-233, 240-257, 261-283, 296-318, 328-347 and 375-394" misc_feature complement(2396558..2397604) /locus_tag="CMS_2255" /old_locus_tag="CMS2255" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 1.3e-60" gene 2397966..2399378 /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /db_xref="GeneID:6157883" CDS 2397966..2399378 /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /codon_start=1 /transl_table=11 /product="putative polysaccharide biosynthesis protein" /protein_id="YP_001710932.1" /db_xref="GI:170782599" /db_xref="GeneID:6157883" /translation="MLRRGAVLIILTLLVGVGAAAAFSLLQTPEYEASTKMYVAQSSS SNVQDLQQGNNFITQAVKSYADVVTTRAVLQPVIDQYGLDVTSRELAESVRASAPLDT TIIDITVKDQSRQDAATLADAIGESLKTVVGTLVPETIEGTPQVQITQLEQAEIPESP SSPNLPVNIIVGALIGLLIGVGVSLLRETLDNRIRGERDVELVTTKPILGGIAYDPKA TERPLIVQDDPRSPRAESFRSLRTNLQFLEFGGRSRSFVITSSIQGEGKSTTSSNLAL ALADSGIKVVLIDADLRRPRLASYMGLEGAVGLTDILIGRAEIEDVIQPWGSGMLSIL PAGQIPPNPSELLGSQGMARLLQDLEARYDVVLIDAPPLLPVTDAAILSKNAGGAIIV VAAGRTHRTQLKSAIANLTNVGADVLGLVITMLPTKGPDAYGYGHYGYGYGYGYGYGY GYTEDEDGQKTKAPIEKIKA" sig_peptide 2397966..2398061 /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /note="Signal peptide predicted for CMS2256 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.770 between residues 32 and 33" misc_feature 2397966..2398346 /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /inference="protein motif:HMMPfam:PF02706" /note="HMMPfam hit to PF02706, Lipopolysaccharide biosynthesis, score 3.8e-13" misc_feature order(2397984..2398052,2398464..2398523) /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /note="2 probable transmembrane helices predicted for CMS2256 by TMHMM2.0 at aa 7-29 and 167-186" misc_feature 2398473..2398550 /locus_tag="CMS_2256" /old_locus_tag="CMS2256" /note="PS00217 Sugar transport proteins signature 2." gene 2399388..2400107 /gene="ptpA" /locus_tag="CMS_2257" /old_locus_tag="CMS2257" /db_xref="GeneID:6157884" CDS 2399388..2400107 /gene="ptpA" /locus_tag="CMS_2257" /old_locus_tag="CMS2257" /EC_number="3.1.3.48" /codon_start=1 /transl_table=11 /product="low molecular weight protein-tyrosine-phosphatase" /protein_id="YP_001710933.1" /db_xref="GI:170782600" /db_xref="GeneID:6157884" /translation="MSELPPTSRRAARAALGDASSEGVDDGSFRVLFVCSGNICRSAL AEQVLRARVRAIFGDHAAEADSVVRFSSAGTIAAEGQRMPEQAAELSVRYGGDPSEHQ ARFLTPGIIQGVDLVLTMAREHRSAVVRAVPRANRFTFTIREFAALFEHLVEVTGDEK HIACDGDVPEQLRALIPLVAAQRGVTLPPAHEDDYDVVDPYRRSQATYDASGEQAGGA IESILESVRAVTRTDAPRLRG" misc_feature 2399472..2399933 /gene="ptpA" /locus_tag="CMS_2257" /old_locus_tag="CMS2257" /inference="protein motif:HMMPfam:PF01451" /note="HMMPfam hit to PF01451, Low molecular weight phosphotyrosine protein phosphatase, score 6.8e-07" gene 2400319..2401674 /locus_tag="CMS_2258" /old_locus_tag="CMS2258" /db_xref="GeneID:6158888" CDS 2400319..2401674 /locus_tag="CMS_2258" /old_locus_tag="CMS2258" /codon_start=1 /transl_table=11 /product="putative initial glycosyl transferase" /protein_id="YP_001710934.1" /db_xref="GI:170782601" /db_xref="GeneID:6158888" /translation="MQFLWFGTTAGTVDLGGNAQGVAVTYTMVSVVLILSWLFVLTVY STRDYRIVGTGTQEYKQVADATLRLFGIIAIVAFLVKIDLARGYIVTGLPLGLVLLLL SRALWRVWLSAQRRRGEFSSLILLVGSLESTTHTATTLARAPKAGYRVVGACLTGDAR PSRLPGLDVPVVGNADDVLGELERLGADTLVLTSSDELPPERIRELSWRLEPGRHHLV MAPGLTDIGGPRIHTRPVAGLPLIHVETPRFEGRKLLSKRLFDIVVSGITLIVLSPVF LILAILIKATSKGDVFYKQERIGLNGEPFHMLKFRSMRMNADAELFALLEQQGTADTP LFKVTDDPRITKVGGVLRRYSLDELPQFLNVLLGSMSLIGPRPQREGEVALYDSAARR RLLIKPGMSGLWQVSGRSSLSWEDAIRLDLYYVENWSLTGDIIILARTFKAVFGADGA V" misc_feature order(2400382..2400450,2400511..2400558,2400571..2400639, 2401102..2401167) /locus_tag="CMS_2258" /old_locus_tag="CMS2258" /note="4 probable transmembrane helices predicted for CMS2258 by TMHMM2.0 at aa 22-44, 65-80, 85-107 and 262-283" misc_feature 2401087..2401671 /locus_tag="CMS_2258" /old_locus_tag="CMS2258" /inference="protein motif:HMMPfam:PF02397" /note="HMMPfam hit to PF02397, Bacterial sugar transferase, score 1.4e-72" gene 2401674..2402804 /locus_tag="CMS_2259" /old_locus_tag="CMS2259" /db_xref="GeneID:6157885" CDS 2401674..2402804 /locus_tag="CMS_2259" /old_locus_tag="CMS2259" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710935.1" /db_xref="GI:170782602" /db_xref="GeneID:6157885" /translation="MGGLLVQEWIEKSGGSEKVFDAFAHAFPDADLFTLWNDDPGRFG DRPVRESWIARTPLRKRKPLALPFMPLTWSSLDLDAYEWTLASSHLFAHHLGHGDHGT RRHVYVHSPARYLWTPDLDQRGANPLVKAAAPPLRALDRRRAQASRAEVAANSAFVRD RIRTAWDVDARVIHPPVDASVIRGTASWADALTGADAALAASLPDQFLLGASRFVPYK RLNLVIRAGEAAGVPVVLAGSGPLAEELQAQADAATVPVTIVPRPSDALLYTLYQRAL AYVFPAVEDFGIMPVEAMAAGARVLVTDVGGATESVVDGVTGVHVHAWEGAELADAVA RAAALDPAASVRRSHDFDAAVFERHIASWVRHDGARLDGAVA" misc_feature 2402247..2402726 /locus_tag="CMS_2259" /old_locus_tag="CMS2259" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 7.2e-18" gene 2402801..2403850 /locus_tag="CMS_2260" /old_locus_tag="CMS2260" /db_xref="GeneID:6157886" CDS 2402801..2403850 /locus_tag="CMS_2260" /old_locus_tag="CMS2260" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001710936.1" /db_xref="GI:170782603" /db_xref="GeneID:6157886" /translation="MMRRLVVNEAYAGQRVTGQQRYATEIARALEGKKGVTRATPSEG VASSGARSWLWVQTTLPWITRQDVLLSLTSRAPLVHRRHIVVVHDLFVLTNPEWYSRE YVVTHVPLLKANLRDARVIVTVSEPVAEQVRELGLSSAPVVVAPNAPSPVFGEPRGAE ERARVLERFGVTDGGYLLAVGSMDPRKNLKRLTEAYLELPAETRAAHPLVLVGAKSAV FGDVDMAESDDIKLAGYVTDDELAVLYAASRGVVFPSLAEGFGLPLVEAMVAGARLAV SDIPVFHWICEDDADYFSPADTSAITGALARLAAADPLEDEDAARIRRAVTCRFDWRT SAQTVHDAYQSIGTR" misc_feature 2403284..2403775 /locus_tag="CMS_2260" /old_locus_tag="CMS2260" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 5e-07" gene 2403847..2405037 /gene="wzx2" /locus_tag="CMS_2261" /old_locus_tag="CMS2261" /db_xref="GeneID:6157887" CDS 2403847..2405037 /gene="wzx2" /locus_tag="CMS_2261" /old_locus_tag="CMS2261" /codon_start=1 /transl_table=11 /product="putative polysaccharide export protein" /protein_id="YP_001710937.1" /db_xref="GI:170782604" /db_xref="GeneID:6157887" /translation="MIRRIGLLLPTGAAGLTRVLQLVLLVVLTRLSEGSAQSALVTGF ALLSSFAIITDSGAANFLLSLPRARLTRSVHARAVAFHAGLGSLGAVIAVVLTVAAAS SIPGEAVLLLAALGVSQVLDSLTRTIRAPLLVGRRDASYAFPDLALVVLKAVPLVIAV LVPEILVLLAFPVVSLVVTAGTWIAVRRGLATTSDEPVRVFPQILEFGLSGSLSALYS QAPLVLGTAILGVDAVTPLALAYRVVQPLEVLPATLSQQLIPRIRAAGRPARAYWWRF ALGGLVLAGILALLRGPVEQVFGGDAFDQAIFLVILLSVAPKFGNYALMAYAMGSDLV RVRLTATIVTGVVAVVLTLAAALTAGPALLAGVTLVAELVLSAAIAALLIRHRTSPVR KEDA" sig_peptide 2403847..2403960 /gene="wzx2" /locus_tag="CMS_2261" /old_locus_tag="CMS2261" /note="Signal peptide predicted for CMS2261 by SignalP 2.0 HMM (Signal peptide probability 0.906) with cleavage site probability 0.220 between residues 38 and 39" misc_feature order(2403865..2403933,2403976..2404044,2404081..2404149, 2404312..2404380,2404657..2404716,2404759..2404818, 2404852..2404920,2404930..2404998) /gene="wzx2" /locus_tag="CMS_2261" /old_locus_tag="CMS2261" /note="8 probable transmembrane helices predicted for CMS2261 by TMHMM2.0 at aa 7-29, 44-66, 79-101, 156-178,271-290, 305-324, 336-358 and 362-384" gene 2405034..2406083 /locus_tag="CMS_2262" /old_locus_tag="CMS2262" /db_xref="GeneID:6159096" CDS 2405034..2406083 /locus_tag="CMS_2262" /old_locus_tag="CMS2262" /codon_start=1 /transl_table=11 /product="putative transferase" /protein_id="YP_001710938.1" /db_xref="GI:170782605" /db_xref="GeneID:6159096" /translation="MRTLIVSADRTLASGHPQNLGDAFLTDALSERLRRAGHETVIAD FGQAARLDSTEERARVSGVRALADLVRQVDAVVVGGGTLLADDQPDRPFAGLPRLMAV TGLIARTSRTPLAVFGVGADPVTRRRARLALRSGLDGARVWTRDPDSAGRAAGYSKLP IEVAADVSLFAAPELAAMAAPAAHRRGAVVALNAKHSPQATLADVAALEERFGEVVFV SMDQGDDSDAGALHPEVRARLTTEPGDHGWRRAAGIMADREVVIASRMHAMYLGTMLT TPVVAVGGATKVGAFTTEFGTRTEPAFDRAVRTAIAAPADAGAASTTAAALVAATARL DAAFEEMTTWVRRTA" gene 2406113..2408848 /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /pseudo /db_xref="GeneID:6157888" misc_feature order(2406140..2406208,2406245..2406313,2406380..2406448) /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /note="3 probable transmembrane helices predicted for CMS2263 by TMHMM2.0 at aa 10-32, 45-67 and 90-112" /pseudo misc_feature 2406735..2406800 /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" /pseudo misc_feature 2406800..2406921 /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" /pseudo misc_feature 2406921..2406986 /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" /pseudo misc_feature 2407071..2407613 /gene="wzy1" /locus_tag="CMS_2263" /old_locus_tag="CMS2263" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.7e-38" /pseudo gene 2407646..2408626 /locus_tag="CMS_2265" /old_locus_tag="CMS2265" /db_xref="GeneID:6159097" misc_feature order(2407682..2407750,2407793..2407852,2407886..2407954, 2408012..2408077,2408225..2408278,2408408..2408476, 2408495..2408548,2408558..2408626) /locus_tag="CMS_2265" /old_locus_tag="CMS2265" /note="8 probable transmembrane helices predicted for CMS2265 by TMHMM2.0 at aa 13-35, 50-69, 81-103, 123-144,194-211, 255-277, 284-301 and 305-327" gene 2408845..2410743 /locus_tag="CMS_2266" /old_locus_tag="CMS2266" /db_xref="GeneID:6157889" CDS 2408845..2410743 /locus_tag="CMS_2266" /old_locus_tag="CMS2266" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710940.1" /db_xref="GI:170782606" /db_xref="GeneID:6157889" /translation="MTGIDDILPPADGPDGSDGSPDRRSRRAGRDGRDGRAERDASRT PRPLWKRKRLWIPVGVLGVVVIGTAVSAALILPRVDTVQSELRDALPLSDQVQTALLA GDIDTAKAGAAELRDHTAKAAEAADDGVLGAYEWIPFVGPNLHAARVLAATSDRLATD VVTPATEVSLSAFTPVLGRIDLDGIRSLGQTVQTASDGLAGARAELETIDRDSLWAQV ADDVDLMDDTLTSTEETAGTFREVTGVLPDLLGADGARNYLLMFQNNAEVRSTGGNPA ALVLLTVEDGTVRIAKQASSNDFPRNVRQGDVPDETVRLIEPRSDRFEQNITMFPDFP TSGALAKSYWEANIGDRVDGVLSFDPIALSYLLEATGPITLATGDELNAENAVPTLLG AVYSQYPDYLAQDRYFASAASTIFAKLVTDTPPVVPLVTAIDRAIDEKRLLLWSTVPE EQTLIEGGPLSGALPDDNSDATAIGLYFNDIGSGSKMSYYLRSGSRVQAETCGDTTTY TVSVDMTSIAPADAATSLPRYVTGLDGTAKGRQFDDLLVYGPVGSTVTGWKTDADLTT EEARGTDMGRGMIRIRTELAPQDTKTVDVTFTMPASDAQGPLEVRHTPLVRPLESEIT QVPCSTGG" misc_feature 2409004..2409072 /locus_tag="CMS_2266" /old_locus_tag="CMS2266" /note="1 probable transmembrane helix predicted for CMS2266 by TMHMM2.0 at aa 54-76" gene 2410899..2411483 /locus_tag="CMS_2267" /old_locus_tag="CMS2267" /db_xref="GeneID:6157890" CDS 2410899..2411483 /locus_tag="CMS_2267" /old_locus_tag="CMS2267" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710941.1" /db_xref="GI:170782607" /db_xref="GeneID:6157890" /translation="MTPSTTTPPRRAHRVRRWIVRTLLALLVLLLAWLLAGIPLFVFP PASQPDKADVIYVIGPPNPTRRDLAAKLVDEGYSDTVVFSVPPTGPQSAAELAACQGE FPYPVTCDTPSPFTTQGEARYLKEKSEENGWKSAIVITWTPHVTRTQLIFSRCFTGDL MVVEDPVDFSLRQWVSQYTYQTGAFVKALVTPGC" sig_peptide 2410899..2411054 /locus_tag="CMS_2267" /old_locus_tag="CMS2267" /note="Signal peptide predicted for CMS2267 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.739 between residues 52 and 53" misc_feature 2410956..2411024 /locus_tag="CMS_2267" /old_locus_tag="CMS2267" /note="1 probable transmembrane helix predicted for CMS2267 by TMHMM2.0 at aa 20-42" gene 2411551..2412372 /locus_tag="CMS_2268" /old_locus_tag="CMS2268" /db_xref="GeneID:6157891" CDS 2411551..2412372 /locus_tag="CMS_2268" /old_locus_tag="CMS2268" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710942.1" /db_xref="GI:170782608" /db_xref="GeneID:6157891" /translation="MTTAIGPTTGDDIHLISLNVRMPWHGTREGEADHWPERQEVLTR FLQQERPTVLGVQEALWPQIQAIEKALPPSYRMVGQGREGGSHGEHGAIFYQASRLTL LEHDVMWLSDTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHDVAEARD RAAEAIAELVRTRFAGLPLVLMGDFNAPVDSFPYDALTRRAGLRDSWLDTARQATPAF GTFPDYRPPVVGAPRIDWILVSERVDVRAAAVNDFTWRGRMMSDHLPVQALVRLS" misc_feature 2411587..2412360 /locus_tag="CMS_2268" /old_locus_tag="CMS2268" /inference="protein motif:HMMPfam:PF03372" /note="HMMPfam hit to PF03372,Endonuclease/exonuclease/phosphatase, score 5.6e-12" gene 2412488..2413471 /locus_tag="CMS_2269" /old_locus_tag="CMS2269" /db_xref="GeneID:6157892" CDS 2412488..2413471 /locus_tag="CMS_2269" /old_locus_tag="CMS2269" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710943.1" /db_xref="GI:170782609" /db_xref="GeneID:6157892" /translation="MTTAPKVFAIHENSEWFGPFAAALDARGVPYEEWLLTDGVLEID EAPPEGIFWSRISASAHTRDHALSKDYTRALMSWLEAHGRRTVNGRRTIEIEVSKVDQ LTALRAAGIEVPRTRAVVGSHRIVEAARGLPTPFITKHNQGGKGLGVRRFDSVEELAA YVDGPDFEEPQDGITLLQEYLEAATPRVTRVEIVGGRFVYAIQADTARGGYQLCPADA CAIDPATGALVMPPGATIAQQPGDTIFSLREDITTEHPLVERYVAFLAGLGIEVAGIE FIETADGRLVTYDVNTNTNYNAGVEAVAPASGPGAVAELLERVLREAYPEE" misc_feature 2413558..2419660 /note="submitted with no further information" gene complement(2413681..2415590) /locus_tag="CMS_2270" /old_locus_tag="CMS2270" /db_xref="GeneID:6157893" CDS complement(2413681..2415051) /locus_tag="CMS_2270" /old_locus_tag="CMS2270" /codon_start=1 /transl_table=11 /product="putative integral membrane efflux protein" /protein_id="YP_001710944.1" /db_xref="GI:170782610" /db_xref="GeneID:6157893" /translation="MILRASRASRSAPWLLCAIQFLVAVEFSIVNVAVPDLQDDFGTA APVTQWVLSAYAIGFASLLFLGGCAAERLGARSVVIGGLLCFSVTSGVAAMTPDIWSL IAIRVLQGASAAFLTPAALTLLTSLGDGPARDRWLALWGAAASVGFAGGVISGGVFTQ LFGWRSVFVSCAVTACILLASSLFALPQVTSGARQVDVLGASLFALTGVSIASAFGMT ADALGDARVAIWAAVLAAASGVLLIFQQQRSRNPLAPRGLLRRRDVKIGMLLSFVAPA AGGSMVYFSSLYMQNVLGWSELGTGVALLPDALAAAAGAYAAPALVRRVGVKFTVCVG FSAMLFGLLILCMRPSASTATVIQVLVGTSLTGFGLVLCGVVATVAGSRNLSKGEHGA SAGILTASQQWGVAAGLALGANAVALSGNPAAGTLVGALVASMALLAILIAALSSFRR APTRIS" gene complement(2415048..2415590) /locus_tag="CMS_2270b" /old_locus_tag="CMS2270b" /db_xref="GeneID:6166459" CDS complement(2415048..2415590) /locus_tag="CMS_2270b" /old_locus_tag="CMS2270b" /EC_number="2.4.2.7" /codon_start=1 /transl_table=11 /product="putative adenine phosphoribosyltransferase" /protein_id="YP_001710945.1" /db_xref="GI:170782611" /db_xref="GeneID:6166459" /translation="MSGVDVDFAGVSRTLPAVPLPSGIRVAYLKLYGDVELTEHCASI LAGEMRSDVEVLLVGESGGILLGHVIARRLGLPYVLARKKWRPNMEHPLRQFVRSIGT DGDQVLLVDDEDQVLLAGKRVAIVDEVISSGATLGAMRALACSANATVSQVLAVATEG DHRDDVVALAHLPLFSDGVR" gene complement(2415587..2416279) /locus_tag="CMS_2275" /old_locus_tag="CMS2275" /db_xref="GeneID:6157894" CDS complement(2415587..2416279) /locus_tag="CMS_2275" /old_locus_tag="CMS2275" /codon_start=1 /transl_table=11 /product="putative sugar-phosphate epimerase" /protein_id="YP_001710946.1" /db_xref="GI:170782612" /db_xref="GeneID:6157894" /translation="MSETQLTFSVSVVCINQTHLWRELTAIRSLGVSRLHIDIIDPSF GNLGMAPESIRDLSDDLRMPVDVHVMVAEPSLLVPKLVDRGAQAILVHQRHVTPEALE VLRAATVGGTEVGLVLDASESPRDWLIDIVRPQRLVVMAVTPGGAGRPFRREALDTVR MAAEFRGKSSVESVEVDGAVSSITIGKLVDAGADSFVLGSSVFPDRVARADRFLPLLE AAGAADGERVGR" misc_feature complement(2415662..2416261) /locus_tag="CMS_2275" /old_locus_tag="CMS2275" /inference="protein motif:HMMPfam:PF00834" /note="HMMPfam hit to PF00834, Ribulose-phosphate 3-epimerase, score 9.7e-16" misc_feature complement(2415773..2415796) /locus_tag="CMS_2275" /old_locus_tag="CMS2275" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2416276..2417259) /locus_tag="CMS_2276" /old_locus_tag="CMS2276" /db_xref="GeneID:6157895" CDS complement(2416276..2417259) /locus_tag="CMS_2276" /old_locus_tag="CMS2276" /codon_start=1 /transl_table=11 /product="putative sugar-phosphate pyrophosphokinase" /protein_id="YP_001710947.1" /db_xref="GI:170782613" /db_xref="GeneID:6157895" /translation="MIVASCAAFERDHPTALEKIVASMNAPVTVHRSIDEVFPDGEIC VALPQGTLVEDVLLLQSLSTDPVALNDAVFALLASIRMYRVAGVARITVFAPHLAYSR EERAAAIGGRVSTTQLLADLIGAAGADCVIAAQSGSVALVSEAYKPLAIEQLYATNFF VWCIESMQIADPVLVAPDHGAADLVRNIAARLGLQHARADKQRKGATDVALSLTEQAG ALKGREVIIIDDLVCSAGTLDQAVSAVRTLGASRVTAVAAHLRLTPLGMSRIRAMVAA GHLAGLVAWDTCGAPRVRGVQTFAFADWLGPELCAVLRRRSRIDANEEAVS" gene complement(2417256..2417888) /locus_tag="CMS_2278" /old_locus_tag="CMS2278" /db_xref="GeneID:6157896" CDS complement(2417256..2417888) /locus_tag="CMS_2278" /old_locus_tag="CMS2278" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710948.1" /db_xref="GI:170782614" /db_xref="GeneID:6157896" /translation="MSGAITRLVVFDLDGTLMPGTTAAREISVVADVLAEIRSLESQY DAGLLDSLQFSVSALALWGDRFEEACREAAARAPRIGSMTRVLSDLVSMDIVTCLVTM APLEFATLFASFDYVRASQYGLKIMGPGDKPGAVDAIRLDLGVASEEVVVVGDGASDI PLFIKFRRTIAMNAIPELSGIARHSYEGDDLREAIGLEVEQFAFQSGGGK" misc_feature complement(2417361..2417873) /locus_tag="CMS_2278" /old_locus_tag="CMS2278" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 2.3e-10" gene complement(2417888..2418479) /locus_tag="CMS_2279" /old_locus_tag="CMS2279" /pseudo /db_xref="GeneID:6157897" gene 2418607..2419603 /locus_tag="CMS_2280" /old_locus_tag="CMS2280" /pseudo /db_xref="GeneID:6157898" misc_feature 2418821..2419591 /locus_tag="CMS_2280" /old_locus_tag="CMS2280" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.0017" /pseudo gene complement(2419736..2420119) /locus_tag="CMS_2281" /old_locus_tag="CMS2281" /db_xref="GeneID:6157899" CDS complement(2419736..2420119) /locus_tag="CMS_2281" /old_locus_tag="CMS2281" /codon_start=1 /transl_table=11 /product="putative chorismate mutase" /protein_id="YP_001710949.1" /db_xref="GI:170782615" /db_xref="GeneID:6157899" /translation="MPENTGPAGAPLDDDARAALEELGEIRGSIDNIDAALVHLLAER FKFTQSVGRLKAAHGLPAADPERERRQILRLRALAEESKLDPAFAEKFLNFIVAEVIH HHTRIAEDQGAATSAVAPEDGGPAA" misc_feature complement(2419799..2420059) /locus_tag="CMS_2281" /old_locus_tag="CMS2281" /inference="protein motif:HMMPfam:PF01817" /note="HMMPfam hit to PF01817, Chorismate mutase, score 6.2e-14" gene complement(2420202..2420621) /locus_tag="CMS_2282" /old_locus_tag="CMS2282" /db_xref="GeneID:6157900" CDS complement(2420202..2420621) /locus_tag="CMS_2282" /old_locus_tag="CMS2282" /codon_start=1 /transl_table=11 /product="putative stress induced protein" /protein_id="YP_001710950.1" /db_xref="GI:170782616" /db_xref="GeneID:6157900" /translation="MEPIYTAIAHASGGGRDGHVRSEDDRIDFDTRPPKEMGGSGEGT NPEQLFAAGYSACFLGATHLVGKNAGVDTKDAGVSASVSIGDNGQGGFGLAVELDVYL PNVAPERRQEIADAAHQVCPYSNATRGNIDVKVTIVD" misc_feature complement(2420208..2420603) /locus_tag="CMS_2282" /old_locus_tag="CMS2282" /inference="protein motif:HMMPfam:PF02566" /note="HMMPfam hit to PF02566, OsmC-like protein, score 2.5e-41" gene complement(2420793..2421491) /locus_tag="CMS_2283" /old_locus_tag="CMS2283" /db_xref="GeneID:6157901" CDS complement(2420793..2421491) /locus_tag="CMS_2283" /old_locus_tag="CMS2283" /codon_start=1 /transl_table=11 /product="putative two component system response regulator" /protein_id="YP_001710951.1" /db_xref="GI:170782617" /db_xref="GeneID:6157901" /translation="MIRVVLVDDQSIVRAGFRVVLETAGGIEVVGEASGGREAVELVR RLAPDVVVMDVRMPGGDGIEATRAITGADAHADAKADTPARAPGDDPQGPAVLVATTF DLDEYVFGALEAGARGFVLKDAEPEEFIQAVRALAEGRAALDGVTTRRVMDEFTRRRV ASAVHPGVEVLTPREQDIVRLLGDGLSNDEIGGRLVIETSTVKSHLTRIMTKLGTRDR LQTVVWGYRSGLLP" misc_feature complement(2420817..2420990) /locus_tag="CMS_2283" /old_locus_tag="CMS2283" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 3.5e-13" misc_feature complement(2420856..2420939) /locus_tag="CMS_2283" /old_locus_tag="CMS2283" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature complement(2421069..2421488) /locus_tag="CMS_2283" /old_locus_tag="CMS2283" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 8.2e-34" gene complement(2421488..2422924) /locus_tag="CMS_2284" /old_locus_tag="CMS2284" /db_xref="GeneID:6157902" CDS complement(2421488..2422924) /locus_tag="CMS_2284" /old_locus_tag="CMS2284" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001710952.1" /db_xref="GI:170782618" /db_xref="GeneID:6157902" /translation="MTDPTPAPAAGGGAPVPPASARPGLALGDRVRRGLERLGIRTDA GRDAVAAVAWAAVTLGLLVVLLALAWADGTARSTSPAQGWVVGILAVAQCAPLAARRR HPRAVLLAVSVLQAGLVAALPPGFVFWAAAPVVAAYTVGVRLPVGPAARIVAAALGIE AVGAVLAATAWLRAELMPGVVRVPLGLPSLVEAASLLASGILIAVASAAVGSWVALRR RHDRDVLARAVETVEHQAALTRAAVAAERTRMARELHDVAAHHLTALVVQAGAAERLV DLDPERARESLRGIRVQGRETLDALRSIVGILRQTSDGEGGGDAGTAPVPGLADLPGL VAAARTSGTEVEERATGDAPALAPLADVTAYRTVQEALANARRHAPGSAVTLTTEAGP ARIALTIENALPAAAQATAPGYGLVGMRERAALVGGRLEAGPTASGTWRVRLELPVEP VPAAPVPAAPVPTAPVPAGPASAQGADA" misc_feature complement(2421578..2421850) /locus_tag="CMS_2284" /old_locus_tag="CMS2284" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 9.5e-10" misc_feature complement(2421986..2422189) /locus_tag="CMS_2284" /old_locus_tag="CMS2284" /inference="protein motif:HMMPfam:PF07730" /note="HMMPfam hit to PF07730, Histidine kinase" misc_feature complement(order(2422277..2422345,2422403..2422471, 2422484..2422543,2422556..2422609,2422628..2422687, 2422715..2422783)) /locus_tag="CMS_2284" /old_locus_tag="CMS2284" /note="6 probable transmembrane helices predicted for CMS2284 by TMHMM2.0 at aa 48-70, 80-99, 106-123, 128-147,152-174 and 194-216" gene complement(2422966..2424999) /locus_tag="CMS_2285" /old_locus_tag="CMS2285" /db_xref="GeneID:6157903" CDS complement(2422966..2424999) /locus_tag="CMS_2285" /old_locus_tag="CMS2285" /codon_start=1 /transl_table=11 /product="putative beta-lactamase" /protein_id="YP_001710953.1" /db_xref="GI:170782619" /db_xref="GeneID:6157903" /translation="MDTTPRSTPAAPTRGRRSRRLAATVGALALAVALPLAAGAATSA TPADPPPPAPPQHQPGGHDLTRADVDTWLDGVVGSALQTTGIPGAAVSVVADGQVLTS RGYGLADTGTEGSPARPVDPDDTLFRVGSVSKVVSATAVMQLVEEGRLDLDADVQQYL DFDLDTPKGAVTLRHLLTHTAGFEEVITGLIGLPGSERDLGDVMRTDPPAQVFVPGTT PAYSNYGASLAGYVAERVAGKPFVDLVQQEVLDRAGMASSSFAQPLPDDLAARLAKGY PDDTQPAYPVEVVNAAPAGALSATASDMARFMLGHLGDLPADQALLDPATLDEMHRPA LGADQLGSLAAGQRMDLAFFDDSTPGVPAFGHDGDTNVFHTAMRMFPDSDAGIFVTFN GNGRDAVDTLELRTTVLQGFADRYLRAHDAAADGSAASAAPAGDPEAAAALAGTWLSS RSPFSNPGALLNLSGQTEIVPRADGTIAVTPKPLGVTTGVYEKAGDDLWREVGGDAVL ATRASADGGPVDAISWGASFTLLRAEPWQVASVAMPLLLVAVAVLLVSVVAWPATAIA GIGRRRAARADTAVTAAPRPRRSRAHLLSRIGQAVTLLALVDVSAATLRTLQVLQVLG ALAVIPAALAARQAVRTRRGAWVVAGRILVVLALVAVAAFAVGFRLLAPSVSY" sig_peptide complement(2422966..2423085) /locus_tag="CMS_2285" /old_locus_tag="CMS2285" /note="Signal peptide predicted for CMS2285 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.658 between residues 40 and 41" misc_feature complement(order(2422996..2423064,2423293..2423361, 2424871..2424939)) /locus_tag="CMS_2285" /old_locus_tag="CMS2285" /note="3 probable transmembrane helices predicted for CMS2285 by TMHMM2.0 at aa 21-43, 547-569 and 646-668" misc_feature complement(2423764..2424783) /locus_tag="CMS_2285" /old_locus_tag="CMS2285" /inference="protein motif:HMMPfam:PF00144" /note="HMMPfam hit to PF00144, Beta-lactamase, score 5.8e-70" gene complement(2425218..2425610) /locus_tag="CMS_2286" /old_locus_tag="CMS2286" /db_xref="GeneID:6157904" CDS complement(2425218..2425610) /locus_tag="CMS_2286" /old_locus_tag="CMS2286" /codon_start=1 /transl_table=11 /product="putative resistance protein" /protein_id="YP_001710954.1" /db_xref="GI:170782620" /db_xref="GeneID:6157904" /translation="MTARGSLHHVELQVRDLDAALASWGWILGELGYAEDVSWADGRS LRLGDAYIVIARAPRDAPHDRRAAGLSHLAFHAGSAADVDRLWAAAPDHGWARLYADW HPHAGGPDHHAAFLEDGERFKVELVADA" misc_feature complement(2425233..2425595) /locus_tag="CMS_2286" /old_locus_tag="CMS2286" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 0.00042" gene complement(2425607..2425879) /locus_tag="CMS_2287" /old_locus_tag="CMS2287" /db_xref="GeneID:6157905" CDS complement(2425607..2425879) /locus_tag="CMS_2287" /old_locus_tag="CMS2287" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710955.1" /db_xref="GI:170782621" /db_xref="GeneID:6157905" /translation="MQSRWAAMVFGDREDPRARLHAVFGGPAARSGQPPLAALEWAER TLTEADPARGVDPVTATRLLRRAEPRLTLKSGAFLAQHAVARRRPA" gene 2426167..2426661 /locus_tag="CMS_2288" /old_locus_tag="CMS2288" /db_xref="GeneID:6157906" CDS 2426167..2426661 /locus_tag="CMS_2288" /old_locus_tag="CMS2288" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710956.1" /db_xref="GI:170782622" /db_xref="GeneID:6157906" /translation="MCTSRRHSISHIRCYPAVDAARVHASAPPPPEDADPGSRSYLDF AVVAEHDGPHAVAVTYDHCAPTPLALGFALDRAQTRTVRYPPLAAGATRRTLVLDVEM RRGPGVIRVAEGPEDARLHVHSLRVTRIRPGEEADDIIAAPAASGTFAVDADAEAEPE ADAA" gene complement(2426716..2427360) /locus_tag="CMS_2289" /old_locus_tag="CMS2289" /db_xref="GeneID:6157907" CDS complement(2426716..2427360) /locus_tag="CMS_2289" /old_locus_tag="CMS2289" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001710957.1" /db_xref="GI:170782623" /db_xref="GeneID:6157907" /translation="MTATVPAPASLVGTHVRLDPLTPDHLPALRAAIAHPAVFAGGFG GGPAGLRTDPAEFDAWARGTFRWDDLPTAVILVGGPHDGELVGTTTLTDLDTRRERAH LGWTAYDPRVWGTVVNAEAKRLLLGLAFDSGFGRVKLQADARNAHSRAAILKLGATFE GVCRRDQLRADGTWRDAAVHSILADEWPAVRAGLDARIAAHEGRPVLFRTPPAS" misc_feature complement(2426887..2427132) /locus_tag="CMS_2289" /old_locus_tag="CMS2289" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 0.0022" misc_feature complement(2426908..2427030) /locus_tag="CMS_2289" /old_locus_tag="CMS2289" /note="PS00041 Bacterial regulatory proteins, araC family signature." gene complement(2427446..2428408) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /db_xref="GeneID:6157908" CDS complement(2427446..2428408) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001710958.1" /db_xref="GI:170782624" /db_xref="GeneID:6157908" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2427458..2428000) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(2428085..2428150) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2428150..2428271) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2428271..2428336) /locus_tag="CMS_2290" /old_locus_tag="CMS2290" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2428506..2429276) /locus_tag="CMS_2291" /old_locus_tag="CMS2291" /db_xref="GeneID:6157909" CDS complement(2428506..2429276) /locus_tag="CMS_2291" /old_locus_tag="CMS2291" /note="C-terminal extension relative to homologues" /codon_start=1 /transl_table=11 /product="putative sortase-sorted copper resistance surface protein" /protein_id="YP_001710959.1" /db_xref="GI:170782625" /db_xref="GeneID:6157909" /translation="MASPHHPRTPSPLRRAALAAAAAALVLGGVLIPAGAASAHDRLV GSTPAADATVTDEPGTVSLDFSEELLALDAQASGFAIQVVNTSDSSFHEDGCVTIDGS TATTRIALGTAGTYQVTWRAVSSDSHPIDGTYSFTYAPAGDTTGTPAILAAPACGDAW AGSAATATPEPEGTMTTQGAESVAPAPTSDAQSGETVPLAETAETTPVWVFVLIGLVI LAAAAVAVVGVVRRSSRRFPGEDGESVGGPYDGSDDPR" misc_feature complement(2428587..2428655) /locus_tag="CMS_2291" /old_locus_tag="CMS2291" /note="1 probable transmembrane helix predicted for CMS2291 by TMHMM2.0 at aa 183-205" misc_feature complement(2428860..2429201) /locus_tag="CMS_2291" /old_locus_tag="CMS2291" /inference="protein motif:HMMPfam:PF04234" /note="HMMPfam hit to PF04234, Copper resistance protein CopC, score 2.4e-09" gene 2429379..2430686 /gene="sufS" /locus_tag="CMS_2292" /old_locus_tag="CMS2292" /db_xref="GeneID:6157910" CDS 2429379..2430686 /gene="sufS" /locus_tag="CMS_2292" /old_locus_tag="CMS2292" /EC_number="2.8.1.7" /codon_start=1 /transl_table=11 /product="cysteine desulfurase" /protein_id="YP_001710960.1" /db_xref="GI:170782626" /db_xref="GeneID:6157910" /translation="MHTAPQDAPGDGTARSAGLTADEIDRIRRDFPILDTEVNGHPLV YLDSAATSQKPRQVLDAERAYLELRNSAVHRGAHTLAALATEEFEEAREKVARFVGVD ASEIVWTSNATEGINLVAYGLGSAAAPESVRVREGDEIVVTESEHHANLIPWQQLALR TGAALRFIPVDDAGALRLETLGDVITDRTRVVALAHVSNVLGGIAQLGPVIARAREVG ALVVLDACQSVPHLPVDLRALDVDLAVFSGHKMLAPTGIGVLYGRRRVLEALPPFLTG GSMITTVTMEAAEFLPPPQRFEAGTQRISQVVALGVAVEYLEAVGMDRIAEHGRRIGA RLVSGLSGIRGVRVLGSGADGHRVGLAAFDLAGVHAHDVGQILDDRGIAVRVGHHCAQ PLHRRLGLTASTRASGTLHTTDAEIDLLLQGVEDAAAFFGAGR" misc_feature 2429541..2430638 /gene="sufS" /locus_tag="CMS_2292" /old_locus_tag="CMS2292" /inference="protein motif:HMMPfam:PF00266" /note="HMMPfam hit to PF00266, Aminotransferase, class V,score 2.6e-08" misc_feature 2430099..2430158 /gene="sufS" /locus_tag="CMS_2292" /old_locus_tag="CMS2292" /note="PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site." gene 2430683..2431126 /locus_tag="CMS_2293" /old_locus_tag="CMS2293" /db_xref="GeneID:6159002" CDS 2430683..2431126 /locus_tag="CMS_2293" /old_locus_tag="CMS2293" /codon_start=1 /transl_table=11 /product="NifU-like protein" /protein_id="YP_001710961.1" /db_xref="GI:170782627" /db_xref="GeneID:6159002" /translation="MSAPASGGGALYQELILDHSRTPEGQGDPTGWPLHAHQVNPTCG DEITLGVRIEDGRVAEIAWTGHGCAISQASASMLVGVLDGVDLDTAHARAAAFREVMR SRGASHLDPEEFGDAVALDGVSRYMGRVKCAMLPWTTLEEALRAG" misc_feature 2430713..2431081 /locus_tag="CMS_2293" /old_locus_tag="CMS2293" /inference="protein motif:HMMPfam:PF01592" /note="HMMPfam hit to PF01592, Nitrogen-fixing NifU-like,N-terminal, score 1.1e-13" gene 2431227..2431622 /locus_tag="CMS_2294" /old_locus_tag="CMS2294" /db_xref="GeneID:6157911" CDS 2431227..2431622 /locus_tag="CMS_2294" /old_locus_tag="CMS2294" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710962.1" /db_xref="GI:170782628" /db_xref="GeneID:6157911" /translation="MAPDDDMPSTIRRSPEHAQATWSAAHAAAEEQYGSGERAERTAF AALKHGFEKVGDHWEPKASAGPSDAGAEDRGAGTAGGVDANASKAHLTEVARRLDVTG RSRMTKDELVDGIRKANDRETRRARERDS" gene complement(2431648..2432202) /locus_tag="CMS_2295" /old_locus_tag="CMS2295" /db_xref="GeneID:6157912" CDS complement(2431648..2432202) /locus_tag="CMS_2295" /old_locus_tag="CMS2295" /codon_start=1 /transl_table=11 /product="putative acetyl tranferase" /protein_id="YP_001710963.1" /db_xref="GI:170782629" /db_xref="GeneID:6157912" /translation="MPDLATDRLLLRRFTDADAPFLLDLHSRPEAMRWIGAGAVQTDP AQAASRAARYAALDHPVRGIWAIEDREGGALLGTLLLKDLPASAAPLAGDDPAPRDAP EDGETEIGWHLHPDAWGRGVATEAAKRVLAHAAEGGLSRVLAVTNPANAPSQAVCRRI GMRPLGRTRAYYDTECALFRVDLP" misc_feature complement(2431714..2432004) /locus_tag="CMS_2295" /old_locus_tag="CMS2295" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 2.4e-12" gene 2432320..2433369 /locus_tag="CMS_2296" /old_locus_tag="CMS2296" /db_xref="GeneID:6157913" CDS 2432320..2433369 /locus_tag="CMS_2296" /old_locus_tag="CMS2296" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710964.1" /db_xref="GI:170782630" /db_xref="GeneID:6157913" /translation="MGTYREAWASFPVLIRQYHPEFNRGITLTQVPPAADVLLTWQCD TGHVFVATPEEQRRRPGRGRRRSSWCPDCAEAAAPRTPVLPMADQVRWPGASPLVAGP VAGGSAAGAAASAAAGGSAAAGSPRPRRGARDGMPSSRGTGRDRRGKDGTPSAAAPAD ADHPASADRPAARVAAPPPARARRSPAVCAKTPDLPVGEPFASACAPPPASAVEERLR QDLAARLECMSPLNAVRLARPFFEHLEAWPDILLPELRVAIEYDSTGRHGLEHVGRRE EADRRKDRALRAAGWEVIRIRTGKLPPLGPYDLCVSGLTRGTVDQLLDRLREIRGPFL VDAYLREVPPSAAAG" gene complement(2433386..2433949) /locus_tag="CMS_2297" /old_locus_tag="CMS2297" /db_xref="GeneID:6157914" CDS complement(2433386..2433949) /locus_tag="CMS_2297" /old_locus_tag="CMS2297" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710965.1" /db_xref="GI:170782631" /db_xref="GeneID:6157914" /translation="MTSSGSARCRAEGCTAPVESGAPVPLCAAHLVAAAARAERAHGV EDVLPSPCPACGSRLGVRYPSGWLCAVCEWRHGDHPDGELAPPRVDVVYYIRFDDRMK IGTSANPRQRLGTLRHDELLAFERGGRAVERARHAQFARQRFDRTEWFDLDVELRAHV AALAAGQPDPWKLLARWRSEALALRVS" gene complement(2434009..2434413) /locus_tag="CMS_2298" /old_locus_tag="CMS2298" /db_xref="GeneID:6157915" CDS complement(2434009..2434413) /locus_tag="CMS_2298" /old_locus_tag="CMS2298" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710966.1" /db_xref="GI:170782632" /db_xref="GeneID:6157915" /translation="MTPRVRALILSGIITGLTMAIVAAARPWTRPDAPDDWVVLRFEA GEAATAYEAFESLAATEIAGDDALQLLEAGCIDGNEFGDDSYDVYFVGPDRRIMWEVL EPIFADAPVPWTSVELRRGLDDQAPVVVRAAR" sig_peptide complement(2434009..2434080) /locus_tag="CMS_2298" /old_locus_tag="CMS2298" /note="Signal peptide predicted for CMS2298 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.568 between residues 24 and 25" misc_feature complement(2434327..2434395) /locus_tag="CMS_2298" /old_locus_tag="CMS2298" /note="1 probable transmembrane helix predicted for CMS2298 by TMHMM2.0 at aa 7-29" gene 2434630..2435052 /locus_tag="CMS_2299" /old_locus_tag="CMS2299" /db_xref="GeneID:6157916" CDS 2434630..2435052 /locus_tag="CMS_2299" /old_locus_tag="CMS2299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710967.1" /db_xref="GI:170782633" /db_xref="GeneID:6157916" /translation="MSDTSTHEELIAAMATVFDLMDAATIAAWDGLTGLQIQLLRVVA TDMRIDRQSLSVWTRTSRAALVPSLAALLQRQILAEQVDVEGAHLVVGTSGRELLERV LRARTGWIRGACAAAQPPVAEADLRHAIVTLRRVADGA" gene 2435128..2436594 /locus_tag="CMS_2300" /old_locus_tag="CMS2300" /db_xref="GeneID:6157917" CDS 2435128..2436594 /locus_tag="CMS_2300" /old_locus_tag="CMS2300" /codon_start=1 /transl_table=11 /product="putative amino acid permease" /protein_id="YP_001710968.1" /db_xref="GI:170782634" /db_xref="GeneID:6157917" /translation="MSNPIEAQAPPRSELKRSITVKQLYFYVVGDVLGSGIYVLVGLV AAAVGGAFWMAFLVGVSIATITGLAYAELVTKYPQAAGASLYINKAFKSPVPTFFITI CMLSANMAAVGSLAAGFVRYLSDLIGLPESAIWATTGIAVAFVAVITLINLIGISESV VANVIMTFVEISGLIIVVAIGVIALIEGVGDPAVLLQFQVEGGPGSAVLAVLAGVSLA FFAMTGFENAANVAEETIDPSRAFPRALIGGMMTAGVVYVLVSMAAALAVPIDALAGN TLPEVVRADLFVIPAAVMLVVFGLIAMVAISNTALVTVVAQSRILFGMARENVVPAVF AKVHPARRSPYVALIFGGAVVAGLLIIGAAIRSSQASIPEDERLDIVDRLATITVVFL LFIYALVIVACLKLRGHDERDDTYRANTPLLVVGILGNVAVLIYTLVDDPGALFWVGG LLALGLVLYLAQRTFGAKKPDLEAAADVAASGPTDREV" misc_feature 2435194..2436549 /locus_tag="CMS_2300" /old_locus_tag="CMS2300" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 1.9e-09" misc_feature order(2435203..2435271,2435281..2435349,2435410..2435478, 2435521..2435589,2435608..2435676,2435734..2435802, 2435863..2435931,2435989..2436057,2436154..2436222, 2436265..2436333,2436391..2436444,2436457..2436510) /locus_tag="CMS_2300" /old_locus_tag="CMS2300" /note="12 probable transmembrane helices predicted for CMS2300 by TMHMM2.0 at aa 26-48, 52-74, 95-117, 132-154,161-183, 203-225, 246-268, 288-310, 343-365, 380-402,422-439 and 444-461" gene 2436597..2437052 /locus_tag="CMS_2301" /old_locus_tag="CMS2301" /db_xref="GeneID:6157918" CDS 2436597..2437052 /locus_tag="CMS_2301" /old_locus_tag="CMS2301" /codon_start=1 /transl_table=11 /product="putative stress protein" /protein_id="YP_001710969.1" /db_xref="GI:170782635" /db_xref="GeneID:6157918" /translation="MHVIVTTDGSQASLQAARQFQVIADSREITEVTVLAVVSPYAAA PFANELGPHHAPAQTELSYRRDAEAAVDVVAEVFDGWGPAIHRDVRSGSPATEIIRAA EELSAGLVSMAAGSRGLTATILLGSTASRVQHSAPCPVLICRPTVRGRG" misc_feature 2436597..2437028 /locus_tag="CMS_2301" /old_locus_tag="CMS2301" /inference="protein motif:HMMPfam:PF00582" /note="HMMPfam hit to PF00582, UspA, score 9.5e-11" gene 2437259..2438221 /locus_tag="CMS_2302" /old_locus_tag="CMS2302" /db_xref="GeneID:6157919" CDS 2437259..2438221 /locus_tag="CMS_2302" /old_locus_tag="CMS2302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710970.1" /db_xref="GI:170782636" /db_xref="GeneID:6157919" /translation="MATRALAAEIRHDPQAFTTWVVEALEVEREELGQVSNVRCEAEE NIDVVVTYESGTRVGIEAKFDHVVTDGQLARESDAVTHLVLLVLDQADAHGHEAEVDA VATWEELLARFRGTRLSQEDIDRIPATKKKVERRMQVLKLDDLLPEGWTTSIIRGDGG MSSIVLDGPTPEGGRRLCGQIQVSGRDSKRPIEEITLEYHVGVNVRLDEDDFPEDPKD RPTWLDDLDILGDVLQRDADRFTVRENSPRNGTSDLGKRKMPIVHEHLKGREWLAQGY CDWSLGAKSALRPLDELEALAHEAVALFVAWDTARMSASAAATS" gene 2438357..2439319 /locus_tag="CMS_2303" /old_locus_tag="CMS2303" /db_xref="GeneID:6157920" CDS 2438357..2439319 /locus_tag="CMS_2303" /old_locus_tag="CMS2303" /note="N/R/C" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710971.1" /db_xref="GI:170782637" /db_xref="GeneID:6157920" /translation="MTHANAPFTPVGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 2438429..2438494 /locus_tag="CMS_2303" /old_locus_tag="CMS2303" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2438753..2439295 /locus_tag="CMS_2303" /old_locus_tag="CMS2303" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1e-41" gene complement(2439360..2440274) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /db_xref="GeneID:6157921" CDS complement(2439360..2440274) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710972.1" /db_xref="GI:170782638" /db_xref="GeneID:6157921" /translation="MRTRLPRAVRPSRPEWALIGITAIWGGTFLAVHVAMEHSGPLFF VGLRFLAAGLISAVVFRRALRGMRRIDVGAGAAIGVMIFLGYGLQTYGLQTIPSSTSA FITALYVPLVPLLQWAAFRKRPSALALVGVALAFVGLLLVAGPQEGVALGAGELATLV STLPIAAEIILIGLFAGRVDVGRVTVVQLLVAGALSLACMPVAGEAVPAFSWVWLVAA LALGASSCLIQLTMNWAQRSVSPTRATIIYAGEPVWAGVVGRVAGERLPALAILGAAL IVAGTLVSELKPRSRREPEPREDRATVG" sig_peptide complement(2439360..2439476) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /note="Signal peptide predicted for CMS2304 by SignalP 2.0 HMM (Signal peptide probability 0.847) with cleavage site probability 0.421 between residues 39 and 40" misc_feature complement(2439417..2439803) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 1.6e-07" misc_feature complement(order(2439573..2439641,2439654..2439722, 2439741..2439809,2439837..2439896,2439915..2439974, 2440002..2440061,2440095..2440154,2440167..2440226)) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /note="8 probable transmembrane helices predicted for CMS2304 by TMHMM2.0 at aa 17-36, 41-60, 72-91, 101-120,127-146, 156-178, 185-207 and 212-234" misc_feature complement(2439843..2440208) /locus_tag="CMS_2304" /old_locus_tag="CMS2304" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 1.8e-17" gene complement(2440293..2441231) /gene="ispE" /locus_tag="CMS_2305" /old_locus_tag="CMS2305" /db_xref="GeneID:6157922" CDS complement(2440293..2441231) /gene="ispE" /locus_tag="CMS_2305" /old_locus_tag="CMS2305" /EC_number="2.7.1.148" /note="catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2-C-methyl-D-erythritol kinase" /protein_id="YP_001710973.1" /db_xref="GI:170782639" /db_xref="GeneID:6157922" /translation="MTSAATSSDAVHARAPGKINVSLTVGALQEDGYHDVATAYQAVS LYEDVYATRSDGFSVEFGGSIDTSRLTTGGDNLAIRAARLLARSTGHRGGVHLRIEKD VPIAGGMGGGSADAAATLLACDTLWGTERTRDQLLALGAELGADVPFALAGGTAIGTG RGDRLSPALAKGTFQWVLAIAEFGVSTPDVYGELDKHRERHAQDIFPAQQIPQVDSGV LQALRAGDPHMLAEVLHNDLQAPALHLAPGLGEVLQLGEENGALAGIVSGSGPTVAFL ASDLDSALELQIALSAARLQVIRATGPVHGARIITG" misc_feature complement(2440389..2440952) /gene="ispE" /locus_tag="CMS_2305" /old_locus_tag="CMS2305" /inference="protein motif:HMMPfam:PF00288" /note="HMMPfam hit to PF00288, GHMP kinase, score 1.9e-24" gene complement(2441242..2442159) /gene="ksgA" /locus_tag="CMS_2306" /old_locus_tag="CMS2306" /db_xref="GeneID:6158774" CDS complement(2441242..2442159) /gene="ksgA" /locus_tag="CMS_2306" /old_locus_tag="CMS2306" /note="catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /protein_id="YP_001710974.1" /db_xref="GI:170782640" /db_xref="GeneID:6158774" /translation="MSDETAAAAAPAPAAAPTLLGPAEIRDLAELLGVAPTKKLGQNF VIDANTVRRIVRVARVEAGTHVVEVGPGLGSLTLGLLETGASVVAVEIDGRLAEQLPI TVALYQPDAVLTVVHEDALRVAELPGDPTALVANLPYNVSVPVLLHLLEHFPAIRTGV VMVQAEVGHRIAAAPGSKVYGAPSVKAAWYGAWRTAGQVSRQVFWPVPNVDSVLVAFE RHAEPFASEELRKRTFTIVDAAFQQRRKMLRQALAELLGGSEAASALLEAGGVAPTSR GEQLSVHDYLRVAHAWAGRDQVGEPLSLR" misc_feature complement(2441278..2442063) /gene="ksgA" /locus_tag="CMS_2306" /old_locus_tag="CMS2306" /inference="protein motif:HMMPfam:PF00398" /note="HMMPfam hit to PF00398, Ribosomal RNA adenine methylase transferase, score 1.5e-40" misc_feature complement(2441881..2441964) /gene="ksgA" /locus_tag="CMS_2306" /old_locus_tag="CMS2306" /note="PS01131 Ribosomal RNA adenine dimethylases signature." gene complement(2442156..2443139) /locus_tag="CMS_2307" /old_locus_tag="CMS2307" /db_xref="GeneID:6157923" CDS complement(2442156..2443139) /locus_tag="CMS_2307" /old_locus_tag="CMS2307" /codon_start=1 /transl_table=11 /product="putative deoxyribonuclease" /protein_id="YP_001710975.1" /db_xref="GI:170782641" /db_xref="GeneID:6157923" /translation="MRHPPVGRLCGMSESSYVRQRDTSSAHGQTRDLTYPPLPEALTV PVYDNHTHLEIADGESPIDFTEHLDRASSVGVRGVIQVGGDLETSRWSAETAAHEPRM LAAVAIHPNEAPGYEEAGTLDDALAEIHELAGRPRVRAVGETGLDFFRTGEEGRAAQQ RSFEEHIRIAKERGIALQIHDRDAHDEVVETLLRVGAPERTVFHCFSGDEDLARICAE NGWYMSFSGTVTFKNAADLREALAFAPRSLLLVETDAPFLTPVPFRGRPNAPYLIPHT LRAMAAHLGTDVSMLAAQISSNTELVYGRWDDEPVTSPSKDPAEMDPAGRA" misc_feature complement(2442228..2443010) /locus_tag="CMS_2307" /old_locus_tag="CMS2307" /inference="protein motif:HMMPfam:PF01026" /note="HMMPfam hit to PF01026, TatD-related deoxyribonuclease, score 4.8e-86" gene complement(2443178..2444764) /gene="metG" /locus_tag="CMS_2308" /old_locus_tag="CMS2308" /db_xref="GeneID:6157924" CDS complement(2443178..2444764) /gene="metG" /locus_tag="CMS_2308" /old_locus_tag="CMS2308" /EC_number="6.1.1.10" /note="methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /protein_id="YP_001710976.1" /db_xref="GI:170782642" /db_xref="GeneID:6157924" /translation="MEPMSRGEPFYITTPIFYVNDVPHIGHAYTEVAADVLARWHRQR GDDTWFLTGTDEHGQKILRTATANDTTPKAWADRLVTESWQPLLEAVDISNDDFIRTT DARHEESVKVFLQRLHDAGFIYTGEYKGYYCVGCEEYKQPSDLLEGTGPFEGQLVCAI HSKPVELLEEKNYFFRMSDFGERLLAFYEERPDFIQPESARNEILSFVRRGLEDLSIS RSSFDWGIPIPWDESHVVYVWFEALMNYVTAIGYGVDDDAFHRRWPATHLVGKDILRF HAVIWPAMLMALGEEPPRRVFGHGWLLVGGEKMSKSKLTGIVPQTITDTFGIDAFRYY FMRAFAFGQDGSFSWEDLSARYQAELANGFGNLSSRVIAMVGRYFDGRIPEANELTEA DLRVQSVARAAASTADDAIERLAIHESLAAVWTLVDELNGYITSQEPWALAKKDEDRA RLETVLHTAVRGLGTLAVLLAPVLPGATAKLWTALGGTGTVGQQRIDLADEWTGSGTV TPLDAPLFPRIEQETVAAGA" misc_feature complement(2443721..2444752) /gene="metG" /locus_tag="CMS_2308" /old_locus_tag="CMS2308" /inference="protein motif:HMMPfam:PF00133" /note="HMMPfam hit to PF00133, Aminoacyl-tRNA synthetase,class Ia, score 2.6e-09" gene complement(2444888..2445076) /locus_tag="CMS_2309" /old_locus_tag="CMS2309" /db_xref="GeneID:6158810" CDS complement(2444888..2445076) /locus_tag="CMS_2309" /old_locus_tag="CMS2309" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710977.1" /db_xref="GI:170782643" /db_xref="GeneID:6158810" /translation="MRVDVSPSIVRFRGRVLSVTIKRPAETIPAGLVAALLAREDAEA VSARVAEHCGVPSAPTLR" gene 2445224..2445406 /locus_tag="CMS_2310" /old_locus_tag="CMS2310" /db_xref="GeneID:6157925" CDS 2445224..2445406 /locus_tag="CMS_2310" /old_locus_tag="CMS2310" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710978.1" /db_xref="GI:170782644" /db_xref="GeneID:6157925" /translation="MHDESPHNTVLGVFATEPEASQFADEVEAQFPQGVIYTSFRVGY RYDRGPGHVEFGPARG" gene complement(2445449..2446198) /locus_tag="CMS_2311" /old_locus_tag="CMS2311" /db_xref="GeneID:6157926" CDS complement(2445449..2446198) /locus_tag="CMS_2311" /old_locus_tag="CMS2311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710979.1" /db_xref="GI:170782645" /db_xref="GeneID:6157926" /translation="MRPTAAINDARLHSATRGSRGALPERSIVPIQTRTALAAAATCA LITTSLLTAMPASAATPAQPGLAAALSVGAPVDAPAYDPSVPAPGPGDLTWSQVPSAG SETATFSAPSSTGSVSKQAVSPTAAANGQSCSIDTGNVYKRKSGGIYPYGAVGGHPAT QCTVVMAQISQTTELYKTVWWGLQKVAGPFNSVNAGQGRLEQTSPIRKCDDLRDTTFR MIVRSTGTFPTGSTGTASAYEEATLPCGTNP" gene complement(2446518..2447669) /locus_tag="CMS_2312" /old_locus_tag="CMS2312" /db_xref="GeneID:6157927" CDS complement(2446518..2447669) /locus_tag="CMS_2312" /old_locus_tag="CMS2312" /EC_number="2.3.3.5" /note="catalyzes the formation of citrate from acetyl-CoA and oxaloacetate" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="YP_001710980.1" /db_xref="GI:170782646" /db_xref="GeneID:6157927" /translation="MTRRSTMTDIRKGLAGVVVDTTAISKVEPATNSLLYRGYPVQEL AAHCSFEQVAYLLWHGELPTDEELAHFENQERAERQPADAVLRIIDALPVDAHPMDVL RTAVSAIGAADPAPEDHSADADLERSVRLLAQIPVLIAYDQRRRQGLAPVEPRDDLGL AENLLLMVHGERPTEADAKAMEVSLILYAEHSFNASTFTARVITSTLADLHSAVTGAI GALKGPLHGGANEAVLETLDEIGDAARVEAWLDEALAAKRKVMGFGHRVYRAGDSRVP TMKAALDDLVVVRVEAGGETGESARRTMELYDALERGMAERTGILPNLDYPSGPAYAL LGFETRAFTPLFVAARVVGWTAHIVEQRASNSLIRPLSEYDGAAERHLS" misc_feature complement(2446560..2447633) /locus_tag="CMS_2312" /old_locus_tag="CMS2312" /inference="protein motif:HMMPfam:PF00285" /note="HMMPfam hit to PF00285, Citrate synthase, score 8e-138" misc_feature complement(2446848..2446886) /locus_tag="CMS_2312" /old_locus_tag="CMS2312" /note="PS00480 Citrate synthase signature." gene 2447928..2449391 /locus_tag="CMS_2313" /old_locus_tag="CMS2313" /db_xref="GeneID:6157928" CDS 2447928..2449391 /locus_tag="CMS_2313" /old_locus_tag="CMS2313" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001710981.1" /db_xref="GI:170782647" /db_xref="GeneID:6157928" /translation="MPESTDHADPATDAQPGAATEPERYDVAVIGAGPAGTAAALRAA ELGASVVVLEAGRVGGTCVNTGCVPTRVLAKTARLVREVRSAGENGIGVGDPTPHWPS IVARVHEQVDRVRSLKDEAERFRAAGVTLIHEGRARFVDDRTLVLDSGRRITAGSIIV CVGGHSRRLPVPGAELATVPEDVLALPGIPRRLAVIGAGNTGAQLVTVFRSFGSEVTL LDVAPRVLTASDEAISEAVADAFTAQGVRVHTGIDTVTGLTKTGDGSITLLWRDGDRP QSSSFDAVIMATGWPADVEDLGLEHAGLEVERSAIPVDRYLRTRVPHILAVGDANGKD MLVQAAQSEGEAAAENAVLGVNRRIPLQLLPAGGFTDPDYAGVGLTQAEARERDSACV VARVPFAEVDRAVIDDREAGFLLLIADRRRELILGAHAVGENAVEVIQSVTTAMAAGV DVATLAHVRFAYPTYSAIIGIAARRLLQEDDRAGELD" misc_feature 2448003..2448944 /locus_tag="CMS_2313" /old_locus_tag="CMS2313" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 2.6e-61" misc_feature 2448102..2448134 /locus_tag="CMS_2313" /old_locus_tag="CMS2313" /note="PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site." misc_feature 2449017..2449346 /locus_tag="CMS_2313" /old_locus_tag="CMS2313" /inference="protein motif:HMMPfam:PF02852" /note="HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidoreductase dimerisation region,score 2.7e-27" gene 2449426..2449938 /locus_tag="CMS_2314" /old_locus_tag="CMS2314" /pseudo /db_xref="GeneID:6157929" misc_feature 2449426..2449935 /locus_tag="CMS_2314" /old_locus_tag="CMS2314" /inference="protein motif:HMMPfam:PF02525" /note="HMMPfam hit to PF02525, NAD(P)H dehydrogenase (quinone), score 3.6e-29" /pseudo gene complement(2450052..2450486) /locus_tag="CMS_2315" /old_locus_tag="CMS2315" /db_xref="GeneID:6157930" CDS complement(2450052..2450486) /locus_tag="CMS_2315" /old_locus_tag="CMS2315" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710982.1" /db_xref="GI:170782648" /db_xref="GeneID:6157930" /translation="MTRDTGGAAVARRPRLLLRAVLLGGIPLVAMSAIAAYLLADGRT ADGRSTLAVGVIVAATAAGSLLYQVDRWSLTRQSVTHFVLMLATVLPGLLLSGWFRVD TAGGVLAVVGIFLATGLVLWTTLYVVMTAVERRRDARAAVRP" sig_peptide complement(2450052..2450171) /locus_tag="CMS_2315" /old_locus_tag="CMS2315" /note="Signal peptide predicted for CMS2315 by SignalP 2.0 HMM (Signal peptide probability 0.794) with cleavage site probability 0.382 between residues 40 and 41" misc_feature complement(order(2450103..2450171,2450184..2450252, 2450286..2450339,2450367..2450426)) /locus_tag="CMS_2315" /old_locus_tag="CMS2315" /note="4 probable transmembrane helices predicted for CMS2315 by TMHMM2.0 at aa 21-40, 50-67, 79-101 and 106-128" gene complement(2450483..2450980) /locus_tag="CMS_2316" /old_locus_tag="CMS2316" /db_xref="GeneID:6157931" CDS complement(2450483..2450980) /locus_tag="CMS_2316" /old_locus_tag="CMS2316" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001710983.1" /db_xref="GI:170782649" /db_xref="GeneID:6157931" /translation="MRRAPARARTSASTIAVAAALGALLAGCATSPAEAPADAAAAAS PVPGSAEIATYRDDGDGMEALLTGTLVERDGCLYLETPGYAPDGGSAHWLPILPERTT RWDGTTLALGDESHRVGDEVSLGGGVSSEPTSPYDLSGMEGIPDACSTEYAWLAGPPR EPAAG" sig_peptide complement(2450483..2450605) /locus_tag="CMS_2316" /old_locus_tag="CMS2316" /note="Signal peptide predicted for CMS2316 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.411 between residues 41 and 42" misc_feature complement(2450897..2450929) /locus_tag="CMS_2316" /old_locus_tag="CMS2316" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2451136..2452539 /locus_tag="CMS_2317" /old_locus_tag="CMS2317" /db_xref="GeneID:6157932" CDS 2451136..2452539 /locus_tag="CMS_2317" /old_locus_tag="CMS2317" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710984.1" /db_xref="GI:170782650" /db_xref="GeneID:6157932" /translation="MLITLTSTAPSASDLSHLLRKHPAKAQAFDLAVGTAHVLYPEAT DDRCTVALLLEVDPIALVRDKRFRSAGAASITHYVNDRPYASSSMLAVALGQVFRTAM GGRSDSFPELAAGALPLTVTVAALPARGGADLVCDLFAPLGWRVEATPVPLDPAFPGW GDSRYVDLVLTGEVRLADALRHLYVLLPVLDDGKHYWVSDDEVGKLLRAGEGWLAEHP SRDLITRRYLAHQRDLVGAADGRLDAGPDALADATAPVDAAAPAPRSPSLARLRAETV HAVLTEVGARTVADVGCGSGALLAHLVADPAFTRIIGTDVSISDLEAAARRLGLRDAS DRARERIQLLPSSATYEDPRIAGLDAIVLMEVIEHVDPDRHGALEASVFGSASPAAVV VTTPNAEHNALYPGLAAGALRHPDHRFEWTRAEFAAWAERVAGRYGYRVEIRPVGDAD PVHGSPTQLALFRKATR" gene 2452536..2455121 /locus_tag="CMS_2318" /old_locus_tag="CMS2318" /db_xref="GeneID:6157933" CDS 2452536..2455121 /locus_tag="CMS_2318" /old_locus_tag="CMS2318" /codon_start=1 /transl_table=11 /product="putative phosphatase" /protein_id="YP_001710985.1" /db_xref="GI:170782651" /db_xref="GeneID:6157933" /translation="MTDAPATAALPIPRMSLVLLVGASGSGKSTFARTHFGPYEVLSS DVFRGLVSNDENDQSATAAAFEALRHVAAHRLRRGLMTVIDATNVQAESRRSLVQLAR DHDVLPVAIVLDVPVGVCVERNAARTDRTFGASVVKRQHDQLQRSLKGLGREGFRKVH VLRGVDEIASARFTVEPLLNDLRHERGPFDAIGDVHGCRAELETLLGELGYEIQRDER GRPVDAAHPEGRRVVFLGDLVDRGPDTPGVLRLAMGMVRAGHAFAVPGNHEDKLVKAL QGKKVRVAYGLAESLAQLAEEDEAFRVDVERFCRELVSHLVLDGGDLVVAHAGLIEAY QGRASGRVRAFALWGDATIGETDEHGLPVRRDWALDYRGSATVLYGHVAGVGTEWVNG TMCLDTGCVFGGELTALRWPEREVVAVPAERVWSEPTVPLGRRYASSAAAGSAAADDV RDPGLLRIDDVLGKQVVETRAFGRVGIREDAAAGALETMSRFAVDPRHLLYLPPTMSP PATSSRDDVLEHPAEAFEAYRRDGLERVICEEKHMGSRAVVLLTRDPARFDAPAGWRG VVHTRTGRPFFDAADTDALLARLDAAVETAGLWAELDTSWLLLDAELLPWSMKAGPLI RDQYASVGAAATAALPAAVRVLEQAAASGIDVADLLDRTRARAADAEGYVAAYRRHAA PYDGLDDVRLAPFQLLATEGATHLAREHSWHLALAGRLADADPGLVVPTRSLEVDLAS PESEEAATRWWQELTDAGGEGMVVKPLAGLVRGRKALAQPGIKVRGREYLRIVYGPDY TEPANLRRLRDRDVGHKRSMALREYALGVEAVERFVAGEPTWRVHQAVFGVLAMESEP VDPRL" misc_feature 2452599..2452622 /locus_tag="CMS_2318" /old_locus_tag="CMS2318" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2453094..2453690 /locus_tag="CMS_2318" /old_locus_tag="CMS2318" /inference="protein motif:HMMPfam:PF00149" /note="HMMPfam hit to PF00149, Metallophosphoesterase,score 3.6e-14" gene complement(2455340..2456254) /locus_tag="CMS_2319" /old_locus_tag="CMS2319" /db_xref="GeneID:6157934" CDS complement(2455340..2456254) /locus_tag="CMS_2319" /old_locus_tag="CMS2319" /EC_number="4.1.3.30" /codon_start=1 /transl_table=11 /product="putative methylisocitrate lyase" /protein_id="YP_001710986.1" /db_xref="GI:170782652" /db_xref="GeneID:6157934" /translation="MLHSTLTSAAKRRAFRERLATGELLRLPGAFNPLSARLIQDKGM DGVYISGAVLSADLGLPDIGLTTLTEVAGRSQQIARVTDLPCLVDADTGFGEPMNVAR TVQMLEDAGVAGLHIEDQVNPKRCGHLDGKQVVDESTALKRIRAAVDARRDPDLLVMA RTDVRGVDGMAAAVDRARALVDAGADAIFPEAMADLAEFAGVRAAVDVPILANMTEFG KSELFTTQQLADVGVNIVIYPVSLLRLAMGAAERGLDAILEEGTLASKVPEMQTRARL YELLDYAGYSAFDEDVFTFTLEGNRGGA" misc_feature complement(2455868..2455885) /locus_tag="CMS_2319" /old_locus_tag="CMS2319" /note="PS00161 Isocitrate lyase signature." gene complement(2456254..2457804) /locus_tag="CMS_2320" /old_locus_tag="CMS2320" /db_xref="GeneID:6157935" CDS complement(2456254..2457804) /locus_tag="CMS_2320" /old_locus_tag="CMS2320" /EC_number="4.2.1.79" /codon_start=1 /transl_table=11 /product="2-methylcitrate dehydratase" /protein_id="YP_001710987.1" /db_xref="GI:170782653" /db_xref="GeneID:6157935" /translation="MQIHRVRVHRSDEALPPGEQLAGRIAAVAADPVEVDAEVAEMIV NRIIDNAAVATASLTRAPVGAARAQALAHGPSTGGAGATVVGADPATRVSAEWAAWAN GVAVRELDYHDTFLAAEYSHPGDNIPPILAAAQHAAAAGRPDGRALTGADVVRGIATG YEIQVDLVKAISLHAHKIDHVAHLGPSAAAGIGTLLGLDQETVFQAIGQALHTTTATR QSRKGAISTWKAHAPAFAGKMAVEAIDRAMRGQTSPTPIYEGEDGVIAWLLDGPDASY DVPLPAPGEAKRAILDTYTKEHSAEYQAQAWIDLARRLHNTHPVLADADAIDSVLIHS SHHTHVVIGSGANDPQKYDPRASRETLDHSIPYIFTVALQDGAWHHVDSYAPERAGRA DTVDLWRRVTTTEDPEWTRRYHSMDPAEKAFGGRVEIRLTDGSTIVDEIAVADAHPLG ARPFARADYVLNLRTLADGVLEDREVDRFLALVERLPELTADELAGLTVTARPGLLDG AGSPKGLL" misc_feature complement(2456314..2457762) /locus_tag="CMS_2320" /old_locus_tag="CMS2320" /inference="protein motif:HMMPfam:PF03972" /note="HMMPfam hit to PF03972, MmgE/PrpD, score 1.2e-124" gene 2457906..2458844 /locus_tag="CMS_2321" /old_locus_tag="CMS2321" /db_xref="GeneID:6157936" CDS 2457906..2458844 /locus_tag="CMS_2321" /old_locus_tag="CMS2321" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001710988.1" /db_xref="GI:170782654" /db_xref="GeneID:6157936" /translation="MLTVAPESPRQHDVLPLLRQADEFALALYPAENYHALDVAALER PGVTFLVARVDGRALGTAAVVDGGDGSAELKRVFVTDAARGLGVGRALLVATEGRARE LGADVMRLETGLPQTAAIALYERAGYRHVPRFGPYVEDPTSVCMERDLRVDPGPVPRW ILRPALADDATWMAELRAVVLRPDLERLGRFDPVRVRRRFLDGWAPERTSVIRVDGRD VGLIACRDEPDAHWVEHFYLDPALQGQGIGGEVLRDLMARHDDGRPFRLDVLQGSAAR RLYERAGFRVEREDAVDVWLVALRRAAGGSDDIAAC" misc_feature 2458053..2458292 /locus_tag="CMS_2321" /old_locus_tag="CMS2321" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 5e-17" misc_feature 2458533..2458760 /locus_tag="CMS_2321" /old_locus_tag="CMS2321" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3.8e-10" gene 2458879..2459406 /locus_tag="CMS_2322" /old_locus_tag="CMS2322" /db_xref="GeneID:6157937" CDS 2458879..2459406 /locus_tag="CMS_2322" /old_locus_tag="CMS2322" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710989.1" /db_xref="GI:170782655" /db_xref="GeneID:6157937" /translation="MGAMRETTPAGRPRLSREDASSRITAFVYGNIVTLATIAPMTTD AAESGRGLWYVLATASSTFLAHTFAESVGRRARSDHRLTAETIRAELRDSLPVLTSAL VPAAVLAYAALTDVPGLTAEIIAIAYLVIRLALLGPVVARLRGERPSLRTFAAGVVLA AVGIGIALVKAGPGF" misc_feature order(2458936..2459004,2459032..2459100,2459158..2459217, 2459230..2459298,2459332..2459385) /locus_tag="CMS_2322" /old_locus_tag="CMS2322" /note="5 probable transmembrane helices predicted for CMS2322 by TMHMM2.0 at aa 20-42, 52-74, 94-113, 118-140 and 152-169" gene 2459874..2461412 /locus_tag="CMS_2323" /old_locus_tag="CMS2323" /db_xref="GeneID:6157938" CDS 2459874..2461412 /locus_tag="CMS_2323" /old_locus_tag="CMS2323" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710990.1" /db_xref="GI:170782656" /db_xref="GeneID:6157938" /translation="MTITPARRALPARIGALTAAAATVVLSVGIGAPAAHAAADPALQ PAPTSRDHLITDVPGLVNGRELGAYAGVDGRTVAASRLIRTESLDKITPAGAATLATV HHVDLVIDLRAPGQIQAKPDVPIPGAKTVAISLFGADGDYPDDTVMYQDLVDKGHVDA ADPGVMISAYRQVLKAIASHTGDGTILIHCSHGMDRTGTVVDLLDRILGVGSSDILHD YLLSNTQLGVDWAKPALLQGTFEAGIASKYAGMDSYIRTTLGVSDTEIQALRARFLVA DDAAAASITVGGVTVPLGDAAGSAGAAVRVGLPAITAGDVHVTTADGTSTSSVSVDGR TITVTVTAADGRTTRTYRITAGLAEIALPGGSTPTVGGTVAFRAAGLTPGATYRVILH STPTDVGSVTAASDGTATGTVTIPAGTDPGTHTLTLVDAQGQAVSDPATITVSAAAVS AVTATATGARHAGPAVATGGTSVAADPWPGLALAALGFAGLAAIAAIAGRTVARRRAA LRRP" misc_feature 2460435..2460473 /locus_tag="CMS_2323" /old_locus_tag="CMS2323" /note="PS00383 Tyrosine specific protein phosphatases active site." misc_feature 2461314..2461382 /locus_tag="CMS_2323" /old_locus_tag="CMS2323" /note="1 probable transmembrane helix predicted for CMS2323 by TMHMM2.0 at aa 526-548" gene 2461409..2462065 /locus_tag="CMS_2324" /old_locus_tag="CMS2324" /db_xref="GeneID:6157939" CDS 2461409..2462065 /locus_tag="CMS_2324" /old_locus_tag="CMS2324" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710991.1" /db_xref="GI:170782657" /db_xref="GeneID:6157939" /translation="MTTAAPRSTRRPLLTAAGIVVASAAVVAGGLLAVGGWPARSDLP HDLAGATVRADVPAPAASADGAGDTSVDSGLGRFRAPSVGLDVPLGAVDVVGGVVDPP GFSSAYRVRDLGVSPEDAAQGTVFVVMHSVRGGGTGPGDLLIDDRAGSASVAPGAAIE VAGVEYAVGSSRAVPKGQLPDDTEVWADTPGRLVVITCLQRPDGSPSRDDMVIEATRA" sig_peptide 2461409..2461597 /locus_tag="CMS_2324" /old_locus_tag="CMS2324" /note="Signal peptide predicted for CMS2324 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.368 between residues 63 and 64" misc_feature 2461445..2461513 /locus_tag="CMS_2324" /old_locus_tag="CMS2324" /note="1 probable transmembrane helix predicted for CMS2324 by TMHMM2.0 at aa 13-35" gene 2462128..2463231 /locus_tag="CMS_2325" /old_locus_tag="CMS2325" /db_xref="GeneID:6157940" CDS 2462128..2463231 /locus_tag="CMS_2325" /old_locus_tag="CMS2325" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710992.1" /db_xref="GI:170782658" /db_xref="GeneID:6157940" /translation="MGMDSARHEVARAWHAAVSPDRLLLAAKTALAVGIAWAVAPFVP GVANEYPYYAPLGALVSMYPTLMGSARTGLQTLLGLAAGIVLATAVILTTGPTWWSIP VIVGIGVILSGSGWFGAGREYVPMAALFVLIIGGQDADTYSLGYLVQMAVGVVTGLVI NVLIAPQLSSGAAGARISAFQHEVADRLRDVGDAVEAESPPAHADWIRASEDLAGTAR DVRADLREADESRKGNPRALVDKRDVRIDHARLEAMDQIVFHVRDISAALADTIWQQR GSIGLDRGIGAPIRDACHAVADVLDLDDPDSPERHRAMGEAARQVRLLVEAVDHQSQE LGRAMGPGVLTAMHLKRVLHQLEPVDAAESPAP" misc_feature order(2462197..2462265,2462278..2462337,2462356..2462424, 2462467..2462535,2462554..2462622) /locus_tag="CMS_2325" /old_locus_tag="CMS2325" /note="5 probable transmembrane helices predicted for CMS2325 by TMHMM2.0 at aa 24-46, 51-70, 77-99, 114-136 and 143-165" gene complement(2463238..2464152) /locus_tag="CMS_2326" /old_locus_tag="CMS2326" /db_xref="GeneID:6157941" CDS complement(2463238..2464152) /locus_tag="CMS_2326" /old_locus_tag="CMS2326" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710993.1" /db_xref="GI:170782659" /db_xref="GeneID:6157941" /translation="MSGAFVKPLLEAGWSPVAAVALRALVGGLVLAPVALVQLRGDLR PVLRAWWRVLGMALVGVAGAQVMYFAAIERIPVGTAILIEFMAPLLLVAVAWAMSRRR PAVPVLLGSVAAAGGLALVVSPSGGGALDPVGLLFAVGAMVGCAGYFAIAARGADGLP PVALAAAGLLVAAVLLALVGVTGILPFTGSVADVVMLGSVVPWWVPMLVVGVVATALA YGAGITAGAMLGSRLASFTGLLEVAAAGAWAWLLLGEELTPLQLVGGVLIVAGIVAVR FDVRADALPVGGEAGTAAAAAATASPAG" misc_feature complement(2463322..2463726) /locus_tag="CMS_2326" /old_locus_tag="CMS2326" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 1.3e-10" misc_feature complement(order(2463328..2463384,2463397..2463465, 2463484..2463552,2463595..2463663,2463697..2463756, 2463784..2463843,2463862..2463930,2463940..2464008, 2464042..2464110)) /locus_tag="CMS_2326" /old_locus_tag="CMS2326" /note="9 probable transmembrane helices predicted for CMS2326 by TMHMM2.0 at aa 15-37, 49-71, 75-97, 104-123,133-152, 164-186, 201-223, 230-252 and 257-275" misc_feature complement(2463784..2464152) /locus_tag="CMS_2326" /old_locus_tag="CMS2326" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 3.5e-13" gene 2464316..2464849 /locus_tag="CMS_2327" /old_locus_tag="CMS2327" /db_xref="GeneID:6157942" CDS 2464316..2464849 /locus_tag="CMS_2327" /old_locus_tag="CMS2327" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710994.1" /db_xref="GI:170782660" /db_xref="GeneID:6157942" /translation="MLTFDAVMLNTAPRATRSGEDLLATPEQLADLMTRSGFSGRFDR DERELREVHRARARLREIWGLDRDAMVDPVNELLARHRAAPRLVRHDALDWHLHATPE DAPLADRILVEAAMALVDVVRSDATDRLRECAADDCEGVLVDLSRNGSKRFCSVRCGN RMNMVAFRERRAQDPVG" misc_feature 2464319..2464828 /locus_tag="CMS_2327" /old_locus_tag="CMS2327" /inference="protein motif:HMMPfam:PF07336" /note="HMMPfam hit to PF07336, Protein of unknown function DUF1470, score 2.2e-16" gene 2464946..2465908 /locus_tag="CMS_2328" /old_locus_tag="CMS2328" /db_xref="GeneID:6157943" CDS 2464946..2465908 /locus_tag="CMS_2328" /old_locus_tag="CMS2328" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001710995.1" /db_xref="GI:170782661" /db_xref="GeneID:6157943" /translation="MTHANAPFTPVGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature 2465018..2465083 /locus_tag="CMS_2328" /old_locus_tag="CMS2328" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2465342..2465884 /locus_tag="CMS_2328" /old_locus_tag="CMS2328" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-41" gene complement(2465921..2466736) /locus_tag="CMS_2329" /old_locus_tag="CMS2329" /db_xref="GeneID:6157944" CDS complement(2465921..2466736) /locus_tag="CMS_2329" /old_locus_tag="CMS2329" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="YP_001710996.1" /db_xref="GI:170782662" /db_xref="GeneID:6157944" /translation="MIILGATPIGNLGDASRRLVEALSSATVVAAEDTRTTIRLLTAL GVENRPRLIALHDHNEQERSADLVELARETDVLVLSDAGMPAISDPGFHLVEAAAAAG VRVTVIPGPSAVLSALAVSGLPTDRFTFEGFLPRKGGDRRRVLRELVRERRTMVFFES PNRLQASLEDVVAEWGPDRRLVVCRELTKLYEEVRRGSAAELAAWAAEGVRGEIVVVA EGAAALEVALATGVTQVLELVADGARLKDAAGTIAEATGLGKRDLYQAALQAR" misc_feature complement(2466128..2466736) /locus_tag="CMS_2329" /old_locus_tag="CMS2329" /inference="protein motif:HMMPfam:PF00590" /note="HMMPfam hit to PF00590, Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase, score 2.2e-33" misc_feature complement(2466464..2466499) /locus_tag="CMS_2329" /old_locus_tag="CMS2329" /note="PS01296 Uncharacterized protein family UPF0011 signature." gene complement(2466802..2467059) /locus_tag="CMS_2330" /old_locus_tag="CMS2330" /db_xref="GeneID:6157945" CDS complement(2466802..2467059) /locus_tag="CMS_2330" /old_locus_tag="CMS2330" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710997.1" /db_xref="GI:170782663" /db_xref="GeneID:6157945" /translation="MFLRSRSRGSETLGLVILGVVLCVVSVLGLTGAFGEISNAGRFD TIVLLGVPVGLVSIGAGIVNWIRGWGDPGDAEVDDPPHVGD" sig_peptide complement(2466802..2466906) /locus_tag="CMS_2330" /old_locus_tag="CMS2330" /note="Signal peptide predicted for CMS2330 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.904 between residues 35 and 36" misc_feature complement(order(2466859..2466927,2466955..2467023)) /locus_tag="CMS_2330" /old_locus_tag="CMS2330" /note="2 probable transmembrane helices predicted for CMS2330 by TMHMM2.0 at aa 13-35 and 45-67" gene 2467488..2468108 /locus_tag="CMS_2332" /old_locus_tag="CMS2332" /db_xref="GeneID:6157946" CDS 2467488..2468108 /locus_tag="CMS_2332" /old_locus_tag="CMS2332" /note="N-terminal extension relative to homologues" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001710998.1" /db_xref="GI:170782664" /db_xref="GeneID:6157946" /translation="MGMSPSRSRSPRSGEIARSRIARIPAPITPAGHALRPLAPHDTD SRYIHHHHRKRGEPRMRTLLHPARTSPALQDAALLIARVAIGFILMAHGLQKFLDYTL DGTAATFTQMGIPVPAAAAVFAATVETVGGAALIIGLLTPVVAALNVLNLLGAFVIVH ADKGVFVDGGGYELVLALIAGLVVVGLLGAGRFSVDGLLSRRTRTA" misc_feature 2467716..2468057 /locus_tag="CMS_2332" /old_locus_tag="CMS2332" /inference="protein motif:HMMPfam:PF07681" /note="HMMPfam hit to PF07681, , score 1e-30" misc_feature order(2467719..2467772,2467800..2467868,2467893..2467961, 2468004..2468072) /locus_tag="CMS_2332" /old_locus_tag="CMS2332" /note="4 probable transmembrane helices predicted for CMS2332 by TMHMM2.0 at aa 78-95, 105-127, 136-158 and 173-195" gene 2468285..2470531 /locus_tag="CMS_2333" /old_locus_tag="CMS2333" /db_xref="GeneID:6157947" CDS 2468285..2470531 /locus_tag="CMS_2333" /old_locus_tag="CMS2333" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001710999.1" /db_xref="GI:170782665" /db_xref="GeneID:6157947" /translation="MDDAIETNAIPEPEPTEITYDEERFPARPARLRARPQLRASGIR RSSNDPRAADASNPSYVEWLRRQSMLGDADVLSRGLSGSPSMWSNPYARPDARRAIDT ASVRFTAYPISLITKEGESYLGALGDPQLWEIFQSVGIEAVHTGPVKLAGGITEWSQT ASVDGHFDRISTQIDAAFGTEDEFRRLTEVADQHGGSVIDDIVPGHTGKGADFRLAEM GYKDFPGIYHMVEIPEEDWGLLPDVLPGRDAVNLDVAAEQALADQGYIIGRLQRVIFY APGVKETNWSATAPVLGVDGRTRRWVYLHYFKQGQPSINWLDPTFAGMRMVIGDALHS LGDLGASALRLDANGFLGVEKSVEGPAWSEGHPLSEAANHLIASMVRKVGGFSFQELN LTMEDIRDTGRVGADLSYDFINRPAYQHALATGDTEFLRLTLRTSLEVGVEPVTLVHA LQNHDELTYELVHWATEHCADVFPFRGEEVTGADLAVAIRGDLLEELTGESADYNHVF TTNGIACTTASVIAAAQGFTTLDAIGEDDVAGIRAAHLLLAKFNAWQPGVFALSAWDL LGVLPLQASQVADLIEGGDTRWVHRGGHDLLDAAPEATASGSGMPRGHSLYGSLPAQV DDPQSFVSGLRSVLEVRERFDVALGTQVDVPDVGHHGMLVMVHRLDNGDPEADARLQL TVLNFTGEAILATVRSEELPARRVVRDATTGEEVGTVDDLSSFPVQLEPYAGLFLMLD EEQEAEEA" gene complement(2470572..2470901) /locus_tag="CMS_2334" /old_locus_tag="CMS2334" /db_xref="GeneID:6157948" CDS complement(2470572..2470901) /locus_tag="CMS_2334" /old_locus_tag="CMS2334" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711000.1" /db_xref="GI:170782666" /db_xref="GeneID:6157948" /translation="MRAPLLDPSTGGSRPRTPRIAFAGDAIPALDDLRALDAGVVRTH AGLERTRGADVAVTGILASGCVTPRLLTNRVADLVRHPIAAPRIAVEWADIRDRRIRD VALEAWC" gene complement(2470901..2471455) /locus_tag="CMS_2335" /old_locus_tag="CMS2335" /db_xref="GeneID:6157949" CDS complement(2470901..2471455) /locus_tag="CMS_2335" /old_locus_tag="CMS2335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711001.1" /db_xref="GI:170782667" /db_xref="GeneID:6157949" /translation="MSVLVAVAPSRASGEDAAVPSALPAALDDGVVAGVSMRRLVEVC GTPCVHSGEAMGIRGDGDGCGALVVVAVTAVLAGADGERVVCVDGHLDGVDARWGEAR VLGRGSGCRSVVRIVAATPTSGTAAVALPDDLAVGDLVVVPCGGSPALHDVRLGGRPV GTGRLRGGGGAGDRRVPPRRRRRP" gene 2471682..2473406 /locus_tag="CMS_2336" /old_locus_tag="CMS2336" /db_xref="GeneID:6157950" CDS 2471682..2473406 /locus_tag="CMS_2336" /old_locus_tag="CMS2336" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711002.1" /db_xref="GI:170782668" /db_xref="GeneID:6157950" /translation="MPDSPHRPTEHGADGTAADIAADPTPDHSDAHDATPTRVARRAD ERAVTARGSRLDDLWARLVSTPARRRAWHWGGPIAITLLAAVLRIQSLGPPATLVFDE TFYVKDAWTLLHLGYEGSWPTDPNPDFIAGQTDGYLQAPAFVAHPPLGKWIIALGLAV FGAADPVGWRIATAVVGTLAVVLLMLIARRLTGSAVVATMAGFLFAIDGHAIVMSRVA LLDTHVMFFGLLGFGAILLDRTWHERRFERLLALRRDARPEGAPPLEFGPIVLWRPWL IAAGLAFGATSSVKWSGIFFLAGFGLYVVLTDMLLRRRHGLAAWFTAGAAVQGPVSFL LLVPAAIAAFLASYAGWFATSNGYFRNWAAEGANAWQGGLAWVPLSIQSLWHYLAQQY SFNVGLDVSHPYRADPRLWLLLYRPTQFYYEGYGYGESGCTIDACSASITSIANPIIW WLSVAAMLYLVYRLAARREWRVGLVLMGMVVGYLPWLLYVNRTVFQFYSIAFEPYLIL CLAMVLGMILSDRGDARPRRTRGIVIVAAVLVVCALVSAFFYPLWTGQLVPTWFWRLH AWIPSGWI" misc_feature 2471913..2472743 /locus_tag="CMS_2336" /old_locus_tag="CMS2336" /inference="protein motif:HMMPfam:PF02366" /note="HMMPfam hit to PF02366, Glycosyl transferase,family 39, score 4.7e-07" misc_feature order(2472177..2472245,2472264..2472323,2472333..2472392, 2472546..2472614,2472672..2472740,2472777..2472845, 2473023..2473076,2473095..2473151,2473179..2473238, 2473272..2473340) /locus_tag="CMS_2336" /old_locus_tag="CMS2336" /note="10 probable transmembrane helices predicted for CMS2336 by TMHMM2.0 at aa 166-188, 195-214, 218-237,289-311, 331-353, 366-388, 448-465, 472-490, 500-519 and 531-553" misc_feature 2473266..2473313 /locus_tag="CMS_2336" /old_locus_tag="CMS2336" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene 2473406..2474410 /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /db_xref="GeneID:6157951" CDS 2473406..2474410 /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711003.1" /db_xref="GI:170782669" /db_xref="GeneID:6157951" /translation="MPATATRLHPALPGLGAAAAAALVAWAVHALVPAIPLLTIAVAL GIVAAQIPAARPALTGALKPGLTLASKRLMRIGVVLLGLQLGLSDIVGLGWRAVLLVV AVVVLSFAGTYAIARALRMPGQQPLLLATGFSICGASAIGAMAGVTRAKAADQGAPVA LVTLCGTLAIAVLPPLAGPLGLDDVTFGHWVGAGVHDVGQVVATAQIAGSAALTIAIA VKLTRVLLLAPVVAVAGVVMRRRDGRVEGAARPPIVPLFVLGFLAAVLVRTFVPLPVG VLDAAQVLQTALLAIALVALGSAVRLRELVGQGGSALAAGLLSWALIAGLALAAVRLS" sig_peptide 2473406..2473552 /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /note="Signal peptide predicted for CMS2337 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.567 between residues 49 and 50" misc_feature order(2473433..2473501,2473505..2473564,2473622..2473690, 2473694..2473753,2473781..2473849,2473883..2473951, 2474036..2474104,2474162..2474230,2474243..2474311, 2474330..2474398) /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /note="10 probable transmembrane helices predicted for CMS2337 by TMHMM2.0 at aa 10-32, 34-53, 73-95, 97-116,126-148, 160-182, 211-233, 253-275, 280-302 and 309-331" misc_feature 2473442..2474353 /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /inference="protein motif:HMMPfam:PF03601" /note="HMMPfam hit to PF03601, Conserved hypothetical protein 698, score 7.9e-53" misc_feature 2474069..2474116 /locus_tag="CMS_2337" /old_locus_tag="CMS2337" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(2474539..2474910) /locus_tag="CMS_2338" /old_locus_tag="CMS2338" /db_xref="GeneID:6157952" CDS complement(2474539..2474910) /locus_tag="CMS_2338" /old_locus_tag="CMS2338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711004.1" /db_xref="GI:170782670" /db_xref="GeneID:6157952" /translation="MDFTSIRIITDDVDRLACFYEAVLGVAAVRPAPVFAELRTGGGA VAIGSRATVATLGEATTQPASNRSVILEFLVDDVDEEFARLRGSLEDVVLEPTTMPWG NRSVLFRDPDGNLVNLFTRPD" misc_feature complement(2474557..2474907) /locus_tag="CMS_2338" /old_locus_tag="CMS2338" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 9.1e-10" gene complement(2474987..2475694) /locus_tag="CMS_2339" /old_locus_tag="CMS2339" /db_xref="GeneID:6157953" CDS complement(2474987..2475694) /locus_tag="CMS_2339" /old_locus_tag="CMS2339" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711005.1" /db_xref="GI:170782671" /db_xref="GeneID:6157953" /translation="MTRTDRLYALVEELRRVAPRPRSARQLAERFEVSSRTIERDLSA LQQAGVPIWAEPGRTGGYCIDAAHTLAPLGFTVEEGLAVTIGLAMLREGPFAPAAATA LQKVLAVTEGRRAEETTGLATRIHLLDDGRTDTFPTGFADALRRREVLRIRYRDRRDV ETTRDVEPLGYVHRDRSWYLIGWCRTRDGVRAFRADRIVTADPTGERPPRRELRAEDL EIPHGDLRPVYASEGSS" misc_feature complement(2475566..2475631) /locus_tag="CMS_2339" /old_locus_tag="CMS2339" /note="Predicted helix-turn-helix motif with score 1336.000, SD 3.74 at aa 55-76, sequence RSARQLAERFEVSSRTIERDLS" gene 2475851..2477902 /gene="cysD" /locus_tag="CMS_2340" /old_locus_tag="CMS2340" /db_xref="GeneID:6157954" CDS 2475851..2477902 /gene="cysD" /locus_tag="CMS_2340" /old_locus_tag="CMS2340" /EC_number="2.5.1.49" /note="Contains extra C-terminal CoA-binding domain fusion relative to homologues" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine (thiol)-lyase" /protein_id="YP_001711006.1" /db_xref="GI:170782672" /db_xref="GeneID:6157954" /translation="MVDREYGFKTRAIHAGNIPDGTTGARALPIYQSSAFVFDDTSDA AARFALQKYGNVYSRLSNPTVASFEERVASLEGGLGAVATASGLSAQYITFASLAGAG DHIVASANLYGGSITQLDVTLRRFGVETTFVQSSDPADYAAAITDRTKLVFAETVANP SGEIADIEGLAAVAHAAGVPLVIDSTIATPYLNRPIEWGADIVIHSATKFLGGHGTTL GGVVVESGLFDWESARFPLLDQPVPSYGGLNWTGNFGEYAFLTRLRAEQLRDIGPALA PHSAFLLAQGVETLPYRMQAHIDNARAVAEWLDADPHITAVNWAGLPAHPHHERARKY LPTGPGSVFTFEVAGGRAVGQRFIESVELASHLANIGDAKTLVIHPASTTHAQLSEAQ LVDAGVLPGIVRYQRRHRGRRRHHPRPGPGADRRHGRSEVSFDTGGVPPEKTGSAPHP AADAADLAPLDPAEEAADRAAGDAAEAQAADADASVPAEPVADPDADGTQTTQLQNGL TCAIPRSSPLAALLRSERTWTGPSAKERQAILRRAKSVAIVGASPNPARSSYFVGTYL QQSSDYRVYFVNPNATEILGHTAYPDLTSLPEVPDIVDVFRKASDIPSVVDDVVAIGA PVIWVQLGIWNQEAAVDAEARGLTVVMDRCIKVEHARFHGGLHLLGFDTGVISSRKAA V" misc_feature 2475875..2477065 /gene="cysD" /locus_tag="CMS_2340" /old_locus_tag="CMS2340" /inference="protein motif:HMMPfam:PF01053" /note="HMMPfam hit to PF01053, Cys/Met metabolism pyridoxal-phosphate-dependent enzymes, score 8.5e-157" misc_feature 2476451..2476495 /gene="cysD" /locus_tag="CMS_2340" /old_locus_tag="CMS2340" /note="PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site." misc_feature 2477468..2477791 /gene="cysD" /locus_tag="CMS_2340" /old_locus_tag="CMS2340" /inference="protein motif:HMMPfam:PF02629" /note="HMMPfam hit to PF02629, CoA-binding, score 6.4e-14" gene complement(2477913..2478875) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /db_xref="GeneID:6158649" CDS complement(2477913..2478875) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711007.1" /db_xref="GI:170782673" /db_xref="GeneID:6158649" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2477925..2478467) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.1e-37" misc_feature complement(2478552..2478617) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2478617..2478738) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2478738..2478803) /locus_tag="CMS_2341" /old_locus_tag="CMS2341" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2479023..2479532) /locus_tag="CMS_2342" /old_locus_tag="CMS2342" /db_xref="GeneID:6157955" CDS complement(2479023..2479532) /locus_tag="CMS_2342" /old_locus_tag="CMS2342" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711008.1" /db_xref="GI:170782674" /db_xref="GeneID:6157955" /translation="MRIPPARRPREIPGDGQESVWDYPRPPRVDPSGERVVIELGGRV VADSRSAVRVLETSHPPVYYLPSADFAAGVLSSAAGRSWCEYKGEASYLTITAGGVTA DRAAWWYPSPTRGFEVLADRIAVYPSRMDRITVDGVVVEAQEGDFYGGWITPRVVGPF KGAPGTLGW" misc_feature complement(2479122..2479427) /locus_tag="CMS_2342" /old_locus_tag="CMS2342" /inference="protein motif:HMMPfam:PF04248" /note="HMMPfam hit to PF04248, Protein of unknown function DUF427, score 8e-33" gene 2479717..2479977 /locus_tag="CMS_2343" /old_locus_tag="CMS2343" /db_xref="GeneID:6157956" CDS 2479717..2479977 /locus_tag="CMS_2343" /old_locus_tag="CMS2343" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711009.1" /db_xref="GI:170782675" /db_xref="GeneID:6157956" /translation="MGIIGFLVLGLIAGALAKLILPGKQGGGIIVTLILGVVGAFLGG FIGSALFNKGVDSFDLGSLALAIVGAIIVLLVYGAIVGRKKA" misc_feature order(2479717..2479779,2479798..2479866,2479894..2479962) /locus_tag="CMS_2343" /old_locus_tag="CMS2343" /note="3 probable transmembrane helices predicted for CMS2343 by TMHMM2.0 at aa 29-51, 58-80 and 90-112" misc_feature 2479813..2479962 /locus_tag="CMS_2343" /old_locus_tag="CMS2343" /inference="protein motif:HMMPfam:PF04226" /note="HMMPfam hit to PF04226, Transglycosylase-associated protein, score 4e-08" gene 2480038..2480790 /locus_tag="CMS_2344" /old_locus_tag="CMS2344" /db_xref="GeneID:6157957" CDS 2480038..2480790 /locus_tag="CMS_2344" /old_locus_tag="CMS2344" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711010.1" /db_xref="GI:170782676" /db_xref="GeneID:6157957" /translation="MHVGLLIRAGRAPGSAYDDRMPDAVAPPSSSSSSSSSSSSSRSR TAAVLVAVALPPLALAAAGLSHPDHLTDDTAMHWRDMHIALLPVFPLLAIAPILLTRR HDRRLGIVAIVLGFAYAVCYQALDILAGIAAGALQLEGGQGVITMYGLADDIVVTGVW SYVAVTVLASALVIRHAGLLALPGAAIAVVAAVSFVDSHIFFPRGVITMLGLAIGWTW LALASRGPARPGATASTGSASAPAADRAEAAA" misc_feature order(2480176..2480235,2480278..2480337,2480356..2480424, 2480467..2480535,2480554..2480622,2480635..2480703) /locus_tag="CMS_2344" /old_locus_tag="CMS2344" /note="6 probable transmembrane helices predicted for CMS2344 by TMHMM2.0 at aa 47-66, 81-100, 107-129, 144-166,173-195 and 200-222" gene 2480800..2482167 /gene="sdaA" /locus_tag="CMS_2345" /old_locus_tag="CMS2345" /db_xref="GeneID:6157958" CDS 2480800..2482167 /gene="sdaA" /locus_tag="CMS_2345" /old_locus_tag="CMS2345" /EC_number="4.3.1.17" /codon_start=1 /transl_table=11 /product="L-serine dehydratase" /protein_id="YP_001711011.1" /db_xref="GI:170782677" /db_xref="GeneID:6157958" /translation="MTAYVSALDLFSIGIGPSSSHTVGPMRAALLFAEECQASPRFTE IARVTVRLYGSLGATGLGHGTPDAVVAGLAGLAPETCDPDEVRGRWSGLGEGVDVPLA GIHPVRMVGRDLTFEPFTRLPRHPNAMHLAALDADGGTVLESTWFSVGGGFVLREDQA PSAVLPTGLPHSFSNADELIELAETTGRSIADVARDTEESIHGSRRAVAGLDAIWDAM AACVTAGLGGQGTLPGGLNVRRRAARVASQLASIDAEGTRDTSHEWLHAFALAVNEEN ASGGRVVTAPTNGAAGIIPAVGSYYLRFVPGADRDGIRDYLLTATAIGSLVKANASIS GAEAGCQGEVGTACAMAAGALCAVLGGSPRQVENAAEIAMEHHLGLTCDPVGGLVQIP CIERNAIAASTAVNAARMALHGDGTHLVSLDTVIETMRQTGLDMSTKYKETSTGGLAV NVIEC" misc_feature 2480815..2481285 /gene="sdaA" /locus_tag="CMS_2345" /old_locus_tag="CMS2345" /inference="protein motif:HMMPfam:PF03315" /note="HMMPfam hit to PF03315, Serine dehydratase beta chain, score 9.4e-46" misc_feature 2481319..2482152 /gene="sdaA" /locus_tag="CMS_2345" /old_locus_tag="CMS2345" /inference="protein motif:HMMPfam:PF03313" /note="HMMPfam hit to PF03313, Serine dehydratase alpha chain, score 4.6e-144" gene 2482205..2482603 /locus_tag="CMS_2346" /old_locus_tag="CMS2346" /db_xref="GeneID:6158976" CDS 2482205..2482603 /locus_tag="CMS_2346" /old_locus_tag="CMS2346" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711012.1" /db_xref="GI:170782678" /db_xref="GeneID:6158976" /translation="MGVPALLLAVAALLILGTTQLAAWGALKRNGWIGIRTRPLMVSD ASWKAGHQAALPALRSTCLPVAIGGVIGGIAAGAGMNSVASWGGLLLVGGIVWSTFRA GQAAKRVTRRQDAERQDAERWDRPPRIRHD" sig_peptide 2482205..2482279 /locus_tag="CMS_2346" /old_locus_tag="CMS2346" /note="Signal peptide predicted for CMS2346 by SignalP 2.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.689 between residues 25 and 26" misc_feature order(2482217..2482285,2482373..2482441,2482451..2482504) /locus_tag="CMS_2346" /old_locus_tag="CMS2346" /note="3 probable transmembrane helices predicted for CMS2346 by TMHMM2.0 at aa 5-27, 57-79 and 83-100" gene complement(2482642..2483604) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /db_xref="GeneID:6157959" CDS complement(2482642..2483604) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711013.1" /db_xref="GI:170782679" /db_xref="GeneID:6157959" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2482654..2483196) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(2483281..2483346) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2483346..2483467) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2483467..2483532) /locus_tag="CMS_2347" /old_locus_tag="CMS2347" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2483702..2484808) /locus_tag="CMS_2348" /old_locus_tag="CMS2348" /db_xref="GeneID:6157960" CDS complement(2483702..2484808) /locus_tag="CMS_2348" /old_locus_tag="CMS2348" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711014.1" /db_xref="GI:170782680" /db_xref="GeneID:6157960" /translation="MSVAFCAYPWDLIDDPDAVTRVRAAGADGVAIAAAYHSVRAATP LHPRHRIVDARSAALYLPVREGAWGELRPDDDTPWVGPDAFARAAAIARAAGLRVEAW IVLTHSTSVGTRNPGSCVVNAFGEAYPYALCPARPEVREYATALVAETARAVDLDGVM LEACGPMGLGHLGHHEKTAGADWSAEAEALLSICFCTVCVGLLAEEGEDPDALRADVR ARVDADGGLDGLDAVLRVRSRARRQLLDACLAAARDAGVDRVVVHAQADPWATGPFAA LLDDLDEVDGVVVLDAVAHDADAMRALRERLPGIPLGGYLWALPPATPASIRAGWPAA VRGIDDTYVYHLGLVGRDRLAAVGDALREAGSPA" gene complement(2484805..2485599) /locus_tag="CMS_2349" /old_locus_tag="CMS2349" /db_xref="GeneID:6157961" CDS complement(2484805..2485599) /locus_tag="CMS_2349" /old_locus_tag="CMS2349" /codon_start=1 /transl_table=11 /product="IclR family transcriptional regulator" /protein_id="YP_001711015.1" /db_xref="GI:170782681" /db_xref="GeneID:6157961" /translation="MVTDGPAGERGARPVKSAERTLALLERLAASSEPVSVVDLHRAS GYPRSSLHQLLHTMAASGWIQMLQDGTHVSIGSRALVVGTAYLDRDRALPHALAALER IRDETGYTAHYARREGDRVLYLATRETTESRRATSRVGRQLPAHVTSLGKALLAELSP EERREVLGSGPLAALTPQTVTDVAALDAQLDAARERGYAHEREENLAGVSCVAVSVGY RIPATDAISCSMPIDRASDSEVERVAGIIGAHAHRLAQALRSAGVR" misc_feature complement(2484829..2485380) /locus_tag="CMS_2349" /old_locus_tag="CMS2349" /inference="protein motif:HMMPfam:PF01614" /note="HMMPfam hit to PF01614, Bacterial regulatory proteins, IclR, score 4.9e-34" gene complement(2485593..2486402) /locus_tag="CMS_2350" /old_locus_tag="CMS2350" /db_xref="GeneID:6157962" CDS complement(2485593..2486402) /locus_tag="CMS_2350" /old_locus_tag="CMS2350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711016.1" /db_xref="GI:170782682" /db_xref="GeneID:6157962" /translation="MADTTRIVMTGAAGMAGRGVRPLLRAAGHELVLLDLVDPEPVEG ERAVIASVRDTDAVRDAVRGADVVVHLGGISRERPWDDVLAANIDGTRSVLDAARQEG VRRVLLASSTHAVGFHPVPAVPVDHLPPRPDSLYGVTKAAMEALGSVYADRHAMSVVS ARIGTLLDRPTGRRSLSTWLSFPDLARLVEAVAALEEPGHRIVWGVSRNARAWFSPES GERIGYYPEDDAEAFAAGIVDVDDADVDDADANGLIGGEWAAPEHALGDAW" misc_feature complement(2485950..2486036) /locus_tag="CMS_2350" /old_locus_tag="CMS2350" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene 2486513..2487862 /locus_tag="CMS_2351" /old_locus_tag="CMS2351" /db_xref="GeneID:6157963" CDS 2486513..2487862 /locus_tag="CMS_2351" /old_locus_tag="CMS2351" /codon_start=1 /transl_table=11 /product="putative substrate-binding lipoprotein" /protein_id="YP_001711017.1" /db_xref="GI:170782683" /db_xref="GeneID:6157963" /translation="MMKTRLVRRAIALASVAALAGTMSACSASDGGGSTSADDRSLEV WTRSTPDDAASYQFVFDAFTAKTGIKIDYKPVPEFDTQLQARAQQRSLPDVMVTDAGN LGTYESQGFLRPVDRDAVAGGDQISDATWQSTRGTDGDYYGIPWSRQAAITFIRKDWR EKLGLPVPKTWDDLSALAKAFAEDDPDGDGKADTYGMVVPGSAENGYIARWAASYIWQ AGGDILKDDGDGTYTADFDNPGTEKAMEWIRDQFCTPGVVVPGSVNLTIANTPFFAQG TAGIYQTGPYNLSSFDAAVGKDNVEVIPTPAGPGGGTDSFAEGEDIYFGASSKKQDLQ EQLAEFMITPEAQQLAMQVKTNDQGVLAQPVVRIPVNSSVDIGAVKDDPRWDTAKQVY DEHGRSFPWAIDFTPYRQIVADGLNGVIADCSSDIPGALSDIQSQLSDELDEQGVQG" sig_peptide 2486513..2486611 /locus_tag="CMS_2351" /old_locus_tag="CMS2351" /note="Signal peptide predicted for CMS2351 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.543 between residues 33 and 34" misc_feature 2486531..2487556 /locus_tag="CMS_2351" /old_locus_tag="CMS2351" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 1.3e-31" misc_feature 2486558..2486590 /locus_tag="CMS_2351" /old_locus_tag="CMS2351" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2487859..2488821 /locus_tag="CMS_2352" /old_locus_tag="CMS2352" /db_xref="GeneID:6157964" CDS 2487859..2488821 /locus_tag="CMS_2352" /old_locus_tag="CMS2352" /codon_start=1 /transl_table=11 /product="putative inregral membrane transport" /protein_id="YP_001711018.1" /db_xref="GI:170782684" /db_xref="GeneID:6157964" /translation="MSIGAPAPLLVDPERRAPAAPSPVQPKGRLPFRTRSLIPWAFLV PGLVLGALFKFIPMLEGFRMSFVKVQPFLGDRFLGLDNYVHVLRDRRFTEALGHTVLL GVGQTVGALIIGLALALLLEGTSRRLWFVRTAVFLPVVTAVAVIGEIWRILYFPTETG FLNSLLGMVGIPPQGFISDQSTALGYVMLVGIWTGAPYNMVIILAGLTGIDRTLYEAA AVDGVSMRQRFRYIVMPALRPAVSVVLTLAAIRSLRTFTEVYVLTGGGPAGSTEVWMT RVFSLGFKANDLGVASAASVLLLLATLGLTVGVRALSSRKEKAR" misc_feature order(2487967..2488035,2488153..2488221,2488240..2488308, 2488411..2488479,2488540..2488608,2488726..2488794) /locus_tag="CMS_2352" /old_locus_tag="CMS2352" /note="6 probable transmembrane helices predicted for CMS2352 by TMHMM2.0 at aa 37-59, 99-121, 128-150, 185-207,228-250 and 290-312" misc_feature 2488144..2488812 /locus_tag="CMS_2352" /old_locus_tag="CMS2352" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.7e-07" misc_feature 2488477..2488563 /locus_tag="CMS_2352" /old_locus_tag="CMS2352" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2488818..2489723 /locus_tag="CMS_2353" /old_locus_tag="CMS2353" /db_xref="GeneID:6157965" CDS 2488818..2489723 /locus_tag="CMS_2353" /old_locus_tag="CMS2353" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711019.1" /db_xref="GI:170782685" /db_xref="GeneID:6157965" /translation="MSILERPTGATRRRNDGQFDSALGWKPGLRPSNVIRFALCAVAF VVFAAPFVIIVSGAFDAFTSSTSIHLFPQQLSLESFRVAFDSGVLGYLRNSLVIAGGG LVLQVSVAILTSYALARHRFRGQSFVLLLFLLTMMLPEEVIAIPLSQVIGDVGGTGLD LRGTPLGVILPVAVWGFSILVMTEFMKDIPLEIEEAARLDGCGELRMLWTVILPLCKP VLGVVTIFGFMMIWDQYLLPLIAANDPSDYTLTVALSVLRTDPTVGSGVLLAGALLAL LPSLVIYLLMQRSLIRGITSGATKG" misc_feature order(2488926..2488994,2489103..2489171,2489196..2489264, 2489307..2489375,2489436..2489504,2489604..2489672) /locus_tag="CMS_2353" /old_locus_tag="CMS2353" /note="6 probable transmembrane helices predicted for CMS2353 by TMHMM2.0 at aa 37-59, 96-118, 127-149, 164-186,207-229 and 263-285" misc_feature 2489079..2489705 /locus_tag="CMS_2353" /old_locus_tag="CMS2353" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.1e-10" misc_feature 2489373..2489459 /locus_tag="CMS_2353" /old_locus_tag="CMS2353" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2489728..2490960 /gene="gudD" /locus_tag="CMS_2354" /old_locus_tag="CMS2354" /db_xref="GeneID:6157966" CDS 2489728..2490960 /gene="gudD" /locus_tag="CMS_2354" /old_locus_tag="CMS2354" /EC_number="4.2.1.40" /codon_start=1 /transl_table=11 /product="putative glucarate dehydratase" /protein_id="YP_001711020.1" /db_xref="GI:170782686" /db_xref="GeneID:6157966" /translation="MIIRDLVVTPIAFRDPPLLNADGVHEPLALRTIVELVVDGGVVG LGEGQGGRVVAERVASVRDAVVGLRVTDLHGIERAVDAALGGDAGPLTRQERRVVYSM IDVAAHDAWGRIAGLPVSELLGGRVRDAVPYSAYLFYKWAAHPGEAPDAFGEALDPAG IVAQARLLIDRYGFGSIKLKAGVFPPDEEVAAIRALAEAFPTHPLRIDPNGAWTHETA LRVAAELDGVLEYLEDPVLGIDGMSRVAAHVPQPLATNMCVVTFEQIREAFAKDAVQI VLSDHHYWGGLAHTRELAAICRTFGVGLSMHSNSHLGISLAAMTHVAAASPELAYACD THYPWNRGDDVIVPGALEIVDGSVAVPTAPGLGVELDRDALARQHLVYVESGRTVRDD SGYMRSIQPAYDPTLPRY" misc_feature 2489728..2490099 /gene="gudD" /locus_tag="CMS_2354" /old_locus_tag="CMS2354" /inference="protein motif:HMMPfam:PF02746" /note="HMMPfam hit to PF02746, Mandelate racemase/muconate lactonizing enzyme, score 0.0012" misc_feature 2490169..2490864 /gene="gudD" /locus_tag="CMS_2354" /old_locus_tag="CMS2354" /inference="protein motif:HMMPfam:PF01188" /note="HMMPfam hit to PF01188, Mandelate racemase/muconate lactonizing enzyme, score 7.9e-10" gene 2490960..2491904 /locus_tag="CMS_2355" /old_locus_tag="CMS2355" /db_xref="GeneID:6158738" CDS 2490960..2491904 /locus_tag="CMS_2355" /old_locus_tag="CMS2355" /EC_number="4.2.1.41" /note="catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate" /codon_start=1 /transl_table=11 /product="5-dehydro-4-deoxyglucarate dehydratase" /protein_id="YP_001711021.1" /db_xref="GI:170782687" /db_xref="GeneID:6158738" /translation="MTTTDTATTPAGLLPPLEGVLFFPVTPFDAADRVDVDVFGAHVA HGLDQGAGAAFVACGTGEFHALDIDEYAQAVRAGVAAAGGRHLVIAGVGGPLGHARRC AQLATELGADGILVLPPYLVAGPQDGLAAYVEAVAHATPLPLIAYHRGQAQFTEATVE RLLALPTLAGIKDGAGDVALFQRFVLAARRAGRDDVQFFNGLLTAESSQAAYRAIGVP LYSSAVFAMAPRVASAFHAAYRADDLERQRFLLDEFFTPLVRLRDETPGFAVSLIKAG LRLGGVPVGSVRAPLVDPSPRQLAELERILAHGEDVVA" misc_feature 2491005..2491889 /locus_tag="CMS_2355" /old_locus_tag="CMS2355" /inference="protein motif:HMMPfam:PF00701" /note="HMMPfam hit to PF00701, Dihydrodipicolinate synthetase, score 5e-55" gene 2492006..2492968 /locus_tag="CMS_2356" /old_locus_tag="CMS2356" /db_xref="GeneID:6157967" CDS 2492006..2492968 /locus_tag="CMS_2356" /old_locus_tag="CMS2356" /note="N" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001711022.1" /db_xref="GI:170782688" /db_xref="GeneID:6157967" /translation="MTHANAPFTPVGRLRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 2492078..2492143 /locus_tag="CMS_2356" /old_locus_tag="CMS2356" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2492402..2492944 /locus_tag="CMS_2356" /old_locus_tag="CMS2356" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-41" gene complement(2492965..2494896) /locus_tag="CMS_2357" /old_locus_tag="CMS2357" /db_xref="GeneID:6157968" CDS complement(2492965..2494896) /locus_tag="CMS_2357" /old_locus_tag="CMS2357" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711023.1" /db_xref="GI:170782689" /db_xref="GeneID:6157968" /translation="MPNRLADAVSPYLQSHADNPVDWRTWGEEAFAEARRRDVPVLVS VGYSTCHWCHVMARETFQDPALADRLNAGFVAIKVDREEHPEVDAALITAAGAFTDQL GWPLNVFTTPEGRTFHAGTYSPPEPRAGHPSFRQVLDAVADAWTTRRDQVEQGAGQLS AAIREASERGSVASPLPDAAALDRIAADLAAFEDPEHGGFGSAPKFPVAPVVLLLDTL ATSGVLAPSRAEATRALVRRTLDAMAGSDLRDPVEGGFFRYSTRRDWSEPHYERMLYD NALLLDAYARAGDEEVAGGIAAFLTGTLRRASGGFASAQDSESTVGGRRVEGGYYALD AAGRAAEEPPAVDGKVLTGWNGLAIGALARAGRAFGRPAWIQAARDAADMLLAEHVRA DGSLVRASIDGRVSPAVATLEDHGMLADGLLALALATGEVGYAVRARGIVDALVQAAD AASAAQPGAGEPQSGAAGFRVPTGADPVLAGFGLDLAADPSEGAYPSGLTAACSAARV LGRLTADPRYERAARAALATVAAGGATRPIAFGGALEQAAAIDAAGRQLVVVLPDAAD RGDDPLAAIAHGLTRPPHVSLVVTETAARAWADAGFELLADRVAGSTATAYLCADFVC RLPVTTADALRAQLDDEAR" misc_feature complement(2494678..2494896) /locus_tag="CMS_2357" /old_locus_tag="CMS2357" /inference="protein motif:HMMPfam:PF03190" /note="HMMPfam hit to PF03190, Protein of unknown function DUF255, score 2.1e-41" gene complement(2494936..2496102) /locus_tag="CMS_2358" /old_locus_tag="CMS2358" /db_xref="GeneID:6157969" CDS complement(2494936..2496102) /locus_tag="CMS_2358" /old_locus_tag="CMS2358" /codon_start=1 /transl_table=11 /product="putative cation transport protein" /protein_id="YP_001711024.1" /db_xref="GI:170782690" /db_xref="GeneID:6157969" /translation="MSVMSQHRIRTRLKSVVSRGVAPLGGHAGGAARARAEREDPAEQ PGARRPSLVDNGVYVDGCRVASPATLADTFRELDERPEAMAGIGLYRPTVEELQALAE EFDLHELAVEDAVQAHQRPKTERYSSTLFTVLRAARYVDDREEVEFGELHVFLGRNFV ITVRHAESPDLSAIRTRMQERPELLTHGPQSVLYAILDAVVDGYAPVVTGLANDIDEI EDQVFDGDPAVSRRIYELSREVIDFQRAVRPLGGMLQQLQAGSGKYEVSEDLQQALRD VADHVIVVNERVEEFRVLLRDILTVNSTLVGQRQNEEMRELSESSNRQSVETRKISGW AAILFAPTLVSSVYGMNFDIMPELHWDWGYPFSLVLMLGVSGVLYGIFRKRDWI" sig_peptide complement(2494936..2495034) /locus_tag="CMS_2358" /old_locus_tag="CMS2358" /note="Signal peptide predicted for CMS2358 by SignalP 2.0 HMM (Signal peptide probability 0.652) with cleavage site probability 0.223 between residues 33 and 34" misc_feature complement(2494939..2495862) /locus_tag="CMS_2358" /old_locus_tag="CMS2358" /inference="protein motif:HMMPfam:PF01544" /note="HMMPfam hit to PF01544, Mg2+ transporter protein,CorA-like, score 6.6e-47" misc_feature complement(order(2494957..2495025,2495053..2495112)) /locus_tag="CMS_2358" /old_locus_tag="CMS2358" /note="2 probable transmembrane helices predicted for CMS2358 by TMHMM2.0 at aa 331-350 and 360-382" gene complement(2496150..2497000) /gene="dkgA" /locus_tag="CMS_2359" /old_locus_tag="CMS2359" /pseudo /db_xref="GeneID:6157970" misc_feature complement(2496200..2496946) /gene="dkgA" /locus_tag="CMS_2359" /old_locus_tag="CMS2359" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 1.3e-106" /pseudo gene complement(2496997..2498595) /locus_tag="CMS_2360" /old_locus_tag="CMS2360" /db_xref="GeneID:6158663" CDS complement(2496997..2498595) /locus_tag="CMS_2360" /old_locus_tag="CMS2360" /codon_start=1 /transl_table=11 /product="putative long-chain-fatty-acid-CoA ligase" /protein_id="YP_001711025.1" /db_xref="GI:170782691" /db_xref="GeneID:6158663" /translation="MGPTMTSDTPLLPAHEQEGTGFASVSVAAILAESAERHADRVAV VVGDVATTYRELWDETRAYAGALAARGVGEGTSVAMLIPNVADFPRVYYAVLALGGVV VPVHALLKAEEIAYVLRDSGSALLVCAGPLLEQGAKGAALAEVPVISVLVPASTEGGP DRLEELAPAATPIRTYVPRRPSDIATILYTSGTTGQPKGAEGCHLALVMQVDVLLLNT LDLRTGDRILGCLPLFHTFGQTCTMNASFRIGATIVMVPRFDGDAALALMVEHDTQVF MGVPTMYFALLAAAGRNPARPALRYAVSGGAALPVAAIEAFRDAFSAEIHEGYGLTET SPVASFNHVGLPARPGTVGKPIWGVQIEIADPEHEDRVELLERGVLGEIVIRGHNLMN GYLHRPEDTARAVVDGWFRTGDLGTIDDDGYIRVVDRTKDMILRNGYNVYPREVEEVL ARHEAVAQCAVFGVPHEEHGQEVVAAIVPKADATVDAAEVVAYMKERIASYKYPRRVE VVEALPLGPSGKILKRALVERFGS" misc_feature complement(2497213..2498442) /locus_tag="CMS_2360" /old_locus_tag="CMS2360" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 1.4e-125" misc_feature complement(2498002..2498037) /locus_tag="CMS_2360" /old_locus_tag="CMS2360" /note="PS00455 Putative AMP-binding domain signature." gene 2498720..2502538 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /db_xref="GeneID:6157971" CDS 2498720..2502538 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase" /protein_id="YP_001711026.1" /db_xref="GI:170782692" /db_xref="GeneID:6157971" /translation="MESSIVYPPELPVSRMRDEIADAIRDNQVVIVAGATGSGKTTQL PKICLELGRESIGHTQPRRLAARTISERIAEELGGEVGQLVGYQVRFTDKVSADTRIK LMTDGILLNELQRDRLLKKYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITS ATIDPQSFSKHFGDAPIVEVSGRTYPVEIRYRPLVAEAAVAGEDDDLADAPLERPADD RDFLEGINAALDELAAESSGDVLVFLSGENEIRDAEDAIRSRNLPHTEVLPLYGRLSS ADQHRVFQPSTQAGVRRRIVLATNVAETSLTVPGIKYVIDAGTARISRYSVRSKVQRL PIEAISQASANQRSGRSGRTSDGIAIRLYSEEDFLRRPEFTEPEILRTNLAAVILQMV SLGLGDIAAFPFLQPPDSRGIKDGVDLLTELGAVIRSPDGTPALTQVGRDLSRLPIDP RFARMVVESRKHGVSREVMIIVAGLTIQDVRERPLEKRPQADQQHARFVDPSSDFITL LNLWNHLEEKEAELSSSAFRRMCKAEFLNYVRVREWKDVFRQLRQLARPLDLAMNEPK ADPDGIHKSLLAGLLSHIGLKDAQKKDYVGARQSRFVVFPGSALAKKQPDAIMSAELV ETSRLFARTNAAIDPAWAEPIAGGLVKRTHSEPHWEKKQGATVAWERVTLYGVPIVLK RRVQFSRIDPAYARELFIRHALVEGDWESQQAFDRANRRLREELAEVEERTRRRDILN DDEAVFEFYDKRIPRDVASTRAFEGWWKKQRQETPELLTMTAEELVASDAMDVDEAAF PPTWQQGDQRLSLTYRFEPGAPDDGVTVQVPLALLARLSPAGFDWQVPGMRRDLVTAM IKALPKALRKNVVPAADWADRLLEGLPEPDPQHPVAFTTTIAGLIMRKAHVRVADDDF DLDRIPAHLRMAFRVVDERGREVAAGRDLTELQARLSSRARDSVARATARPVERVAGA KGPATRGMERTGLTTWDLDELPRFVDTAQGGTGDSRHVIRAYPALVDEGSTVAIRLMA TAEDQARAMPGGVRRLLVLAIANPSAYVKQHLTSQEKLMLATSPYPNVQALFDDCLLA CIDQVLERVAPGGAIYSKELFETARDRVSGVVMDSMFDTVALVNRILTGARDAERAIK QATSMQLIGALTDAREQLAGLVHPGFVSATGLARLQRLPAYLSGLTHRVQRLPDQPAR DRAWMTEVQKATDLYREAGGVIPSAPHAPASLVHARWMLEELRLSLFAQHLPTAEPVS LQRIRKVLAG" misc_feature 2498765..2499232 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 1e-09" misc_feature 2498819..2498842 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2499494..2499784 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 2e-10" misc_feature 2499962..2500246 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /inference="protein motif:HMMPfam:PF04408" /note="HMMPfam hit to PF04408, Helicase-associated region,score 1.4e-21" misc_feature 2500364..2500669 /locus_tag="CMS_2361" /old_locus_tag="CMS2361" /inference="protein motif:HMMPfam:PF07717" /note="HMMPfam hit to PF07717, DUF1605, score 1.1e-18" gene 2502757..2504463 /locus_tag="CMS_2362" /old_locus_tag="CMS2362" /db_xref="GeneID:6157972" CDS 2502757..2504463 /locus_tag="CMS_2362" /old_locus_tag="CMS2362" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711027.1" /db_xref="GI:170782693" /db_xref="GeneID:6157972" /translation="MTPDTRSAPPGPSSAAPAVASASADSTTRAATRESLEDYTLRFA PRSYRRWTAGVVATSALGGIAYLADFSIGANIGIAHGTTNALLGILVAAVIIFVTGIP LAYYAARYNIDLDLITRGSGFGYHGSIITNVIFATFTFIFFALEGSIMAQGLELGLGI PRPVGYAASTLLVIPLVIYGMKALSKLQVWTTPLWLVLMVIPFAYLVIANPGSVGTFL AYPGEGGGTGGADLASVMLAAGVCLSLIAQIAEQIDYLRFMPPKTDANRVAWWRAVIL AGPGWVLFGAVKQAVGLFIAVYLIATLDPAASATANEPVHQFLGVYEQMMPGWLALAL AVVLVVISQIKINVTNAYSGSLAWTNSFTRVTRTYPGRMVFVIVNLAIALALMELNMF DFLNTILGFYANCGMAWIVTVATDIAINKHVLGLSPKHPEFRRGMLHDWNPVGVVSLA LSAGISIAMFFGAFGPDIAPFSPMFAVGIAIVATPLMAILTRGRYYLRRTDDGIDLPM LDADGNPSAALLRCHVTGLEFERPDMILSAERAEDGSPQYISSLALATDRTGRYVLPA QR" misc_feature order(2502907..2502975,2503012..2503080,2503117..2503185, 2503228..2503296,2503333..2503401,2503429..2503497, 2503558..2503617,2503732..2503800,2503861..2503920, 2503948..2504016,2504077..2504145,2504158..2504226) /locus_tag="CMS_2362" /old_locus_tag="CMS2362" /note="12 probable transmembrane helices predicted for CMS2362 by TMHMM2.0 at aa 51-73, 86-108, 121-143, 158-180,193-215, 225-247, 268-287, 326-348, 369-388, 398-420,441-463 and 468-490" gene 2504460..2505263 /locus_tag="CMS_2363" /old_locus_tag="CMS2363" /db_xref="GeneID:6157973" CDS 2504460..2505263 /locus_tag="CMS_2363" /old_locus_tag="CMS2363" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001711028.1" /db_xref="GI:170782694" /db_xref="GeneID:6157973" /translation="MSPMLTEPPLRRIVSLGGPYGAGMSDDENAPETPTASAAATGPR RSRTDHVYEQLRDRLMSGAYAPRTRLREEAIAAEMQVSRTPVRTALFMLRSDGLIEND EYGYRVVMPDLQALAALYELRVTLEMRGIQRTIDYDAAAYDLPLLTAELDRWREFAES PPSPTPQFVVEDERFHVTLCRAAGNEAIVDALEAVNHRIRSVRMYDYVTEDRITATVQ EHLAIGDLVVAGDVEAAKAALGEHVGVSLDTVMARATRAITNMVTRGVL" misc_feature 2504598..2504783 /locus_tag="CMS_2363" /old_locus_tag="CMS2363" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 5.3e-13" misc_feature 2504664..2504738 /locus_tag="CMS_2363" /old_locus_tag="CMS2363" /note="PS00043 Bacterial regulatory proteins, gntR family signature." misc_feature 2504811..2505194 /locus_tag="CMS_2363" /old_locus_tag="CMS2363" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 1.2e-14" gene 2505363..2508992 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /db_xref="GeneID:6157974" CDS 2505363..2508992 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /EC_number="6.3.4.6" /codon_start=1 /transl_table=11 /product="urea carboxylase" /protein_id="YP_001711029.1" /db_xref="GI:170782695" /db_xref="GeneID:6157974" /translation="MPTPAPPAPRFDSVLIANRGEIARRIIRTARRMGLRTIAVYSEA DRAAPHVREADEAHLLGPSEPERSYLDIDRIIEVAQAACAGAIHPGYGFISESAAFAR AVEEAGMVFVGPTWQQIEAFGPKHTARAIAMECGVPCVPGSGLVASEDAAAEAAAAVG YPVMVKASGGGGGVGIVTCADETQLRAAYASVTRLAAANFATPGVFVERFIARARHLE VQVFGDGAGEVAILGDRDCSLQRRHQKVVEEAPAPHLPEHVRETMHRSAAALARHVGY RSAGTVEFVYDDRTEDVFFLEMNTRLQAEHPVTEQVLGIDLVEWMLRVGLGDVGPAGF LAAAEIPSPTRHSVEARIYAEDPTKDHRPSSGLLTEVAFPAGAVAGPADLRIESGVET GDVVTPVYDPMLAKLIVTADDRTAAFAALSDALAETRIHGLETNVGLLASIARCPEVL DGSMTTSLLETLRDERPRIDVERGGASTTIQDWPGRLGHWQVGVPPGGPMDDRSFRLA NRAVGNPEGTPALECTVTGPALRFSHATLVCVTGAETVVTVDGAPVPQWEPVLVPAGG TLDVGTVRGVGVRTYVAARAGFDVPAYLGSAATFAPGGFGGHGGRALATGDVLRTAPL DEAGSAAGLGEPAPVPPAERPVIGASWTLHVAEGPHPAPDYFTPDDMAAIYDAEWEVH FHAARTGIRLVGPKPRWARPDGGEAGLHPSNLHDNAYSVGAINFTGDTPSILGPDGPS LGGFACPVTVVSADRWKLGQLRPGDTLRLVPVDESELPRIGEARRTADAFVPRSSRRD DDDGVLARRPATDAAPEVVYRRGGDDNLLVEYGPMTLDLGLRMRIHALMEALARVDPA GLVDVTPGVRSLHLHVDPAVLGVRRLLGLLRELEDTIPATADLVVPSREVHLPLSWDD PSIHEAIDRYASLIRDDAPWNPSNIEFIRRANGLGSVDEVRDIVMSAQYMVLGLGDVY LGAPAAAPLDPRHRLMTTKYNPARTWTAEGTVGIGGTYMCIYGMDSPGGYQLIGRTLP IWAGLRTRRRAFRDGHPWLLRFFDRIRYHPVSADELMHLRSEMAADRLELDIRPGEFS LREHEDMLARDAEPIAAWEAAGEFAVREEAVGADSVEDDVRSRLPEGATVVEAPMAGA VWKVEASTGADVGVGAALLVLEAMKMETPVRAPHDLRVVEMLVAAGATVAAGQPLAIV SATAP" misc_feature 2505390..2505728 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF00289" /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthetase large chain, N-terminal, score 1.8e-37" misc_feature 2505735..2506382 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF02786" /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain, ATP-binding, score 4.8e-78" misc_feature 2505843..2505887 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /note="PS00866 Carbamoyl-phosphate synthase subdomain signature 1." misc_feature 2506245..2506268 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /note="PS00867 Carbamoyl-phosphate synthase subdomain signature 2." misc_feature 2506407..2506742 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF02785" /note="HMMPfam hit to PF02785, Biotin carboxylase,C-terminal, score 1e-37" misc_feature 2506833..2507720 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF02626" /note="HMMPfam hit to PF02626, Urea amidolyase-related,score 1.2e-78" misc_feature 2507808..2508512 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF02682" /note="HMMPfam hit to PF02682, Protein of unknown function DUF213, score 0.0024" misc_feature 2508771..2508974 /locus_tag="CMS_2364" /old_locus_tag="CMS2364" /inference="protein motif:HMMPfam:PF00364" /note="HMMPfam hit to PF00364, Biotin/lipoyl attachment,score 7.7e-13" gene 2509054..2510835 /locus_tag="CMS_2365" /old_locus_tag="CMS2365" /db_xref="GeneID:6157975" CDS 2509054..2510835 /locus_tag="CMS_2365" /old_locus_tag="CMS2365" /EC_number="3.5.1.54" /note="catalyzes the hydrolysis of allophanate" /codon_start=1 /transl_table=11 /product="allophanate hydrolase" /protein_id="YP_001711030.1" /db_xref="GI:170782696" /db_xref="GeneID:6157975" /translation="MTSSPTSAPLTPPAPPAGAPDPVGRVRAAYRRIVEADRPEVWIT LRPEEEALAAAAAVERALADHGADALPLAGLVIAVKDNIDAAGFPTTAALPGSAYTPA ESAPVVARLEAAGAVVVGKTNLDQLATGLVGTRSPYGEVRGAADPELVSGGSSSGSAV AVALGIVDAALGTDTAGSGRVPAAYNRLVGIKPTLGLLPARGVVPAAPSYDTVTVFAR TLGLAERVAGVMAGVDDADPASRPWPADAPLSAAPVLHLAVPVDADLAPMSPEWRRAF DRTVALLADAGVQIVEVDIAPLLAAAALLYDGALVAERTQAVGHLLAGTPEGTDPSVA RIIGSGSAKTAVELVADQQTLRRHRLDARRILAGVDALLLPTAPGHPSRAEVAADPIG VNSWVGTYTNFVNLLDLAAIAVPGPDADGRPFGVTLVGPAFSDAALVDAAGRLQRTIG TAGDDARIPTGSWGPAATPIAVFGAHMVGQPLNGQLTALGARLLGDAVTAPAYRLHAL DTTPPKPGLVATDTGGASITGELWAIPSGRVADFVAQLARPMVVGKVALADGSEVLGF LCEPQAIAGAEDITERGSWRTHLGAGS" misc_feature 2509126..2510370 /locus_tag="CMS_2365" /old_locus_tag="CMS2365" /inference="protein motif:HMMPfam:PF01425" /note="HMMPfam hit to PF01425, Amidase, score 3.3e-83" misc_feature 2509396..2509419 /locus_tag="CMS_2365" /old_locus_tag="CMS2365" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2510841..2511320 /locus_tag="CMS_2366" /old_locus_tag="CMS2366" /db_xref="GeneID:6157976" CDS 2510841..2511320 /locus_tag="CMS_2366" /old_locus_tag="CMS2366" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711031.1" /db_xref="GI:170782697" /db_xref="GeneID:6157976" /translation="MRRERSAAAYRRRMTRILLTGMSGAGKSTLLTELARRGHRTLDT DHDGWTLPDGRWDEPRIAGLLDREPHIVVSGAVENQGAFRDRFEHVVLLSAPLDVLLA RVAARTGNDYGTDPADREEIRRYTREVEPLLRRSADVELDGRRATADLADELERLLG" misc_feature 2510901..2510924 /locus_tag="CMS_2366" /old_locus_tag="CMS2366" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2511328..2512173) /locus_tag="CMS_2367" /old_locus_tag="CMS2367" /db_xref="GeneID:6157977" CDS complement(2511328..2512173) /locus_tag="CMS_2367" /old_locus_tag="CMS2367" /codon_start=1 /transl_table=11 /product="putative sulfurtransferase" /protein_id="YP_001711032.1" /db_xref="GI:170782698" /db_xref="GeneID:6157977" /translation="MEILITPTELDHAIRTRGDVRVIDVRWSLGGPPGRPLHEAGHIP GAVYADLDTELSRHGAPEEGRHPLPEPAALQEAARRWGVRAGDAVVAYDGGGSLAAAR AWWLLRDAGIADVRILDGALPAWTAAGLPLETGPVVPTPGDVTLASGLLAVVDEDGAA RVALDGVLLDARAEERYRGEVEPWDPRPGHIPGARSAPSSDALASDGTFRSRAELRAR YAVLGVPDADEVAVYCGSGVSAALEVAALAIAGIDAALYPGSWSAWANRPELPAATGA EPGGV" misc_feature complement(2511373..2511714) /locus_tag="CMS_2367" /old_locus_tag="CMS2367" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 9e-08" misc_feature complement(2511790..2512101) /locus_tag="CMS_2367" /old_locus_tag="CMS2367" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 6.9e-06" gene complement(2512202..2512687) /locus_tag="CMS_2368" /old_locus_tag="CMS2368" /db_xref="GeneID:6157978" CDS complement(2512202..2512687) /locus_tag="CMS_2368" /old_locus_tag="CMS2368" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711033.1" /db_xref="GI:170782699" /db_xref="GeneID:6157978" /translation="MYRTEVVGWDDARGARIRAAMEAEMDVRYEGRHDDDPDWPAKAA VAFAFDPADVEAVVLLVVDGDDRDAAAHGVIRHLGDELELKKVVVDPAHRGTGLARVL MAELERVARERGARRLILQTGDRQPDAIRLYATAGWLPIDTYPPYIPVTNSVCFEKPL G" misc_feature complement(2512271..2512507) /locus_tag="CMS_2368" /old_locus_tag="CMS2368" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 2.6e-16" gene complement(2512869..2513864) /gene="nrdF" /locus_tag="CMS_2369" /old_locus_tag="CMS2369" /db_xref="GeneID:6157979" CDS complement(2512869..2513864) /gene="nrdF" /locus_tag="CMS_2369" /old_locus_tag="CMS2369" /EC_number="1.17.4.1" /note="B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit beta" /protein_id="YP_001711034.1" /db_xref="GI:170782700" /db_xref="GeneID:6157979" /translation="MSKILGTGIQEGLLLKPVNYQWAMDLYDQAVANTWFPNEIQLGE DIADFKKMTDEERHAITFLMSYFNPNELLVNKALAFGVYPYINAPECHLYLAKQMWEE ANHCMSFEYVLETFPIDREAAYNSHVDIPSMARKEEFEVKFIKRMTEQTLDITTTEGK KDFVRNLVAYNVILEGIWFYSGFMVSLSFRQRNLLRNFGSLMDWIVRDESLHLKFGIN LILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGILGLNANYINQYVKY LADRRLEELGFEAEYKVSNPAKWMATANDTLQLVNFFESTNTSYESNASATVGAK" misc_feature complement(2512962..2513858) /gene="nrdF" /locus_tag="CMS_2369" /old_locus_tag="CMS2369" /inference="protein motif:HMMPfam:PF00268" /note="HMMPfam hit to PF00268, Ribonucleotide reductase,score 7.4e-31" misc_feature complement(2513298..2513366) /gene="nrdF" /locus_tag="CMS_2369" /old_locus_tag="CMS2369" /note="1 probable transmembrane helix predicted for CMS2369 by TMHMM2.0 at aa 167-189" gene complement(2514029..2516533) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /db_xref="GeneID:6158842" CDS complement(2514029..2516533) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /EC_number="1.17.4.1" /note="Catalyzes the rate-limiting step in dNTP synthesis" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase subunit alpha" /protein_id="YP_001711035.1" /db_xref="GI:170782701" /db_xref="GeneID:6158842" /translation="MSITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASE LEITLFDGITTQQLDEAVIQVALQNVKDDPAFDTVAARLLLKTIYKRVLGDYSSPEEL KRLHAEHFARNIQRGVDEMLLDSRLVQLFDLERLAQALEPAHDELLKYIGVVTLNNRY GIKGRNGDALEVPQYFWMRIAMGLTLNEQNPTETAIAFYEKMSKLEYLAAGSTLVNAG TIYPQLANCFVMEMQDDIEHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTT STGPIPFMHTIDSVLRAVSRGGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRT ANTAVWISDEFMKRVQNDEDWYLFDPLEVSDLNELYGKAFSERYAFYVGEAEAGRIRM FKRINAREQFKSILISLQTTSHPWLTWKDTINNRALNNNTGTIHLSNLCTEITLPQDE DNVSVCNLASINLSQHFADGKVDFAKIEQSARLAVRQLDNLIDITRSSVKEADFSNQQ NRAVGLGVMGFTDIVEKLGFSYESEESYDLIDEIMEHVSYAAIDESADLAKERGAYPN FEGSRWSEGLVPLDSIALMEADRGVPVKVNRTTRLDWDALRAKVKGGMRNATLMAIAP TASIGLVAGTTPGLDPQFSQIFSRSTSSGKFLEVNRNLVKDLQELGIWETVRENILRS QGDIQNIAAIPDHVKATYRTSFQLSPYAFLEVAARAQKWIDQAISRNMYLETRDLGDM MDIYFAGWERGVKTTYYLHMKPRHTAEQSTVKVDKSQDADGTKRKGFGGFGGGAPAAV PASAAPASTATAEAPAPQSAPAPRKGFGFGGVGGAR" misc_feature complement(2514248..2515864) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /inference="protein motif:HMMPfam:PF02867" /note="HMMPfam hit to PF02867, Ribonucleotide reductase large subunit, score 5.5e-137" misc_feature complement(2514662..2514727) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /note="PS00089 Ribonucleotide reductase large subunit signature." misc_feature complement(2515868..2516098) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /inference="protein motif:HMMPfam:PF00317" /note="HMMPfam hit to PF00317, Ribonucleotide reductase large subunit, score 3.3e-11" misc_feature complement(2516255..2516527) /gene="nrdA" /locus_tag="CMS_2370" /old_locus_tag="CMS2370" /inference="protein motif:HMMPfam:PF03477" /note="HMMPfam hit to PF03477, ATP-cone, score 7.5e-12" gene 2517412..2518623 /locus_tag="CMS_2373" /old_locus_tag="CMS2373" /db_xref="GeneID:6158841" CDS 2517412..2518623 /locus_tag="CMS_2373" /old_locus_tag="CMS2373" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711036.1" /db_xref="GI:170782702" /db_xref="GeneID:6158841" /translation="MSTYGSLLKTRGMGRIIAAQLVARFPGGMLSLAFLMHVERIHES YGAAGLVLAATSIGQAIAGPLTSRWMGVWGMRPVLILTSIVCTVAVVAVALGDAGTSV PVFMALGLVAGLANPPVQPAVRTIYPKMVNSKQLTPLFSLDASAQEIIWVLGPVIATF LAIQVDTSAGILVAAAFLVGGGAWFISSPELGRVRIPRSKRRFGVVLGRPPVLLSTVV GFLLIAACAAIEAGVVAVFGHGGPEAGIVLAIFAVGSLIGGLSLGHIPISPWAMARRM AIILAGTAVAAVSMNVVWLSVFLFLAGVGIAPALAVLFAVVSSSVRFSDTAEAYGWVG TGQLIGAALGSAAAGFVIDAQGAQGAFVVAAALLAVGAAIAAVFHRHSPDLRGRDAGP IPDTEPVPVMT" misc_feature order(2517445..2517513,2517541..2517609,2517628..2517696, 2517724..2517792,2517853..2517906,2517916..2517984, 2518045..2518113,2518141..2518209,2518243..2518311, 2518321..2518380,2518399..2518467,2518477..2518545) /locus_tag="CMS_2373" /old_locus_tag="CMS2373" /note="12 probable transmembrane helices predicted for CMS2373 by TMHMM2.0 at aa 12-34, 44-66, 73-95, 105-127,148-165, 169-191, 212-234, 244-266, 278-300, 304-323,330-352 and 356-378" misc_feature 2517457..2518470 /locus_tag="CMS_2373" /old_locus_tag="CMS2373" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 2518722..2519201 /locus_tag="CMS_2374" /old_locus_tag="CMS2374" /db_xref="GeneID:6157980" CDS 2518722..2519201 /locus_tag="CMS_2374" /old_locus_tag="CMS2374" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711037.1" /db_xref="GI:170782703" /db_xref="GeneID:6157980" /translation="MTSQQTPLTTRRLRAGIAGLGLVLGLTLAGCSSPAADDAVTPTP SASASASAEAASPTPEATTEGDAGSGDAAAPGSRDAIAAKTRDIACGLKDKSTLEESD VQAFRDLGTEISASTESGAAAAGQQITALADQLAPGVGQPISDELKTQMSSACDSLQ" gene complement(2519270..2520262) /locus_tag="CMS_2375" /old_locus_tag="CMS2375" /db_xref="GeneID:6157981" CDS complement(2519270..2520262) /locus_tag="CMS_2375" /old_locus_tag="CMS2375" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711038.1" /db_xref="GI:170782704" /db_xref="GeneID:6157981" /translation="MEQRSLGRTHRNVSVIGLGTWQLGGDWGDVAEDDALAVLDAAAV AGITFFDTADVYGDGRSETIIGSWLRAHPDSGVTVATKMGRRDAQDPANFTLDRFREW TDRSRRNLGVETLDLVQLHCPPTPVFSSDRVYDALDELVADGAIASYGVSVETTDEAL LAIARPGVASVQIILNAFRLKPLDRVLPAAVEAGVGIIARVPLASGLLSGRYTADTTF AETDHRNFNRGGAAFDVGETFSGVDYDDGVAAAREFAAAAHEAAPDLTPAQVALAWIV QREGVSTVIPGARNAEQAQANARAGDAPALGEVFERQVADVYDRYFRAAVHPRW" misc_feature complement(2519306..2520247) /locus_tag="CMS_2375" /old_locus_tag="CMS2375" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 7.8e-25" gene complement(2520272..2520562) /locus_tag="CMS_2376" /old_locus_tag="CMS2376" /db_xref="GeneID:6157982" CDS complement(2520272..2520562) /locus_tag="CMS_2376" /old_locus_tag="CMS2376" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711039.1" /db_xref="GI:170782705" /db_xref="GeneID:6157982" /translation="MLWILAVAFPAAGLGLRALAAGIATSMPYSSFGDPLGQRWLLDA VPLLVTLAPGVVAGGPMAVIAALAVHATRRRSARAATDDPGAGDREAGDLRA" sig_peptide complement(2520272..2520349) /locus_tag="CMS_2376" /old_locus_tag="CMS2376" /note="Signal peptide predicted for CMS2376 by SignalP 2.0 HMM (Signal peptide probability 0.912) with cleavage site probability 0.378 between residues 26 and 27" misc_feature complement(order(2520356..2520424,2520482..2520550)) /locus_tag="CMS_2376" /old_locus_tag="CMS2376" /note="2 probable transmembrane helices predicted for CMS2376 by TMHMM2.0 at aa 5-27 and 47-69" gene 2521421..2522599 /locus_tag="CMS_2377" /old_locus_tag="CMS2377" /db_xref="GeneID:6157983" CDS 2521421..2522599 /locus_tag="CMS_2377" /old_locus_tag="CMS2377" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="YP_001711040.1" /db_xref="GI:170782706" /db_xref="GeneID:6157983" /translation="MRRGLRTGLIAGASALALLLSFGSGTAVGFMADLGRSTSQAGST QIQDPGSFTPGQGFGRGTTTVPGQGSGRGSGSGSGTQSGTGTSVTSPEATTTQKSGVV TIDSALTYENAAGAGTGIILSSDGTILTNNHVVSGATSIRVTVESTGKAYVGKVVGTD ATNDVAVLKLEGASGLTPAKLDSDGVQVGEAVTGVGNAGGTGTLTAATGQVTATGQSI TTQSEGTAAGETLTDLIQTDAPIVSGDSGGPLVDTENEVVGIDTAASSGSAQIAGFAI PIEKAMGIAKQIESGVESGTVKIGYPAFLGVLLANGQGTVAGAPVQGVVDGSGAAKAG LAQGDVVTSVDGKAVASASELSAAISAHKPGESVTLGWTTAAGAAKTGAVTLTEGPVS" misc_feature 2521445..2521513 /locus_tag="CMS_2377" /old_locus_tag="CMS2377" /note="1 probable transmembrane helix predicted for CMS2377 by TMHMM2.0 at aa 46-68" misc_feature 2521667..2522275 /locus_tag="CMS_2377" /old_locus_tag="CMS2377" /inference="protein motif:HMMPfam:PF00089" /note="HMMPfam hit to PF00089, Peptidase S1, chymotrypsin,score 2.6e-10" misc_feature 2522306..2522539 /locus_tag="CMS_2377" /old_locus_tag="CMS2377" /inference="protein motif:HMMPfam:PF00595" /note="HMMPfam hit to PF00595, PDZ/DHR/GLGF, score 1.1e-07" gene complement(2522672..2523964) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /db_xref="GeneID:6157984" CDS complement(2522672..2523964) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001711041.1" /db_xref="GI:170782707" /db_xref="GeneID:6157984" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATVTGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature complement(2522693..2523151) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature complement(2522804..2522854) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /note="PS01043 Transposases, IS30 family, signature." misc_feature complement(2523773..2523838) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature complement(2523893..2523916) /locus_tag="CMS_2378" /old_locus_tag="CMS2378" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2524314..2524964) /locus_tag="CMS_2380" /old_locus_tag="CMS2380" /db_xref="GeneID:6157985" CDS complement(2524314..2524964) /locus_tag="CMS_2380" /old_locus_tag="CMS2380" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001711042.1" /db_xref="GI:170782708" /db_xref="GeneID:6157985" /translation="MLDMLMGSQMEPGSRLAIDQIARDLHVSPTPVREALVQLERTGL VAREAHKGYRVAPPIAGEQLEALFDARIVLEGGATALAAADPTRLVPALEDALAAHEE TTRRVRAATGDGEMPVGLIREYFVVDWDFHHRIFEATGNPFLLDMSEAISTRVHRMRQ TMRTGVHDADDAVHEHRAVIDAVAEGPEAAAAAMREHIERVRERSRRDADDAAVRE" misc_feature complement(2524365..2524769) /locus_tag="CMS_2380" /old_locus_tag="CMS2380" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 2.7e-18" misc_feature complement(2524800..2524961) /locus_tag="CMS_2380" /old_locus_tag="CMS2380" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 7.7e-05" gene complement(2525055..2525834) /gene="tpiA" /locus_tag="CMS_2381" /old_locus_tag="CMS2381" /db_xref="GeneID:6157986" CDS complement(2525055..2525834) /gene="tpiA" /locus_tag="CMS_2381" /old_locus_tag="CMS2381" /EC_number="5.3.1.1" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="YP_001711043.1" /db_xref="GI:170782709" /db_xref="GeneID:6157986" /translation="MIGVSLKMYLGHAETLAWCEAVAAIARTHPATTRGEAELVVLPS YLSVPAAVGILDGVAAVGAQDLAADDAGASTGEVSGGQIRELGATFVEVGHAERRRLF GETDEVVRRKADRALASGLVPLLCVGEEDRRAPADAARECIRQLDDALALAAGRGHGG RIVVAYEPQWAIGAAEPASDAHIRAVGRELRAHVRSHSAHPGSAVVYGGSAGPGLLTR IGDDVDGLFLGRFAHDPRAVAAILDEVHARAAAGPAAGASR" misc_feature complement(2525097..2525816) /gene="tpiA" /locus_tag="CMS_2381" /old_locus_tag="CMS2381" /inference="protein motif:HMMPfam:PF00121" /note="HMMPfam hit to PF00121, Triosephosphate isomerase,score 1.1e-14" gene complement(2525857..2526318) /locus_tag="CMS_2382" /old_locus_tag="CMS2382" /db_xref="GeneID:6159021" CDS complement(2525857..2526318) /locus_tag="CMS_2382" /old_locus_tag="CMS2382" /codon_start=1 /transl_table=11 /product="putative sugar-phosphate isomerase" /protein_id="YP_001711044.1" /db_xref="GI:170782710" /db_xref="GeneID:6159021" /translation="MTRTWRIVVGADDAGYDHKEAIKADLEASGLVASVVDVGVDADG HTAYPTVATTAAEMVARGEADRAVLICGTGLGMAIAANKVAGVRAVTAHDGFSVERSV LSNDAQVLCMGQRVVGLELARRNVREWLTYEFDTSSPSNDKVDEIRAYEAK" misc_feature complement(2525875..2526120) /locus_tag="CMS_2382" /old_locus_tag="CMS2382" /inference="protein motif:HMMPfam:PF02502" /note="HMMPfam hit to PF02502, Ribose/galactose isomerase,score 2.7e-26" gene complement(2526369..2528018) /locus_tag="CMS_2383" /old_locus_tag="CMS2383" /db_xref="GeneID:6157987" CDS complement(2526369..2528018) /locus_tag="CMS_2383" /old_locus_tag="CMS2383" /EC_number="2.7.1.29" /note="in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="YP_001711045.1" /db_xref="GI:170782711" /db_xref="GeneID:6157987" /translation="MHGGVSRSTRSAEPEVAVVIGGGSGHYPAFGGLVGPGLAHGAAM GNLFASPSAHQVESVIRSSEQGRGALLLYGNYAGDVLHFDDAQERVRGDGIDCRTVVV TDDIFSASPDEQAKRRGIAGDLTVFKAAGAASAAGYDLDDTERVARLANARTRSMGVA FTGCTLPGADEPLFSVPEGRMAIGLGIHGEPGIDETDIPTADGLAELFVTQLLADAEV PDGVEVRGARVVPVLNGLGSVKAEELFVVFTRVADLLEEAGVTLVDPQVGEFCTSFDM AGASLTLFWLDEELERLWTAPADTPAFRSGAFDGSALQPVDAREDDEVDAAIPDATDA SRQAAARIAAALDAVHAVVAEHADELGRLDAVAGDGDHGIGMLRGSRAASERATAAVA QGAGARTVLRLAGDAWSDKGGGTSGALWGLILQAVGDALDDADADPVTADAVARGVGD ARDAVIGHGKAALADKTMVDALVPFAEALAERVGSGSPLDDAWASASDAAQEAADATA AMKPGIGRARSHGERSVGTADPGAVSLALIAAAVGRTIADR" misc_feature complement(2526387..2526923) /locus_tag="CMS_2383" /old_locus_tag="CMS2383" /inference="protein motif:HMMPfam:PF02734" /note="HMMPfam hit to PF02734, Dak phosphatase, score 1.5e-38" misc_feature complement(2527098..2528018) /locus_tag="CMS_2383" /old_locus_tag="CMS2383" /inference="protein motif:HMMPfam:PF02733" /note="HMMPfam hit to PF02733, Dak kinase, score 2.2e-104" gene complement(2528424..2529185) /locus_tag="CMS_2385" /old_locus_tag="CMS2385" /db_xref="GeneID:6157988" CDS complement(2528424..2529185) /locus_tag="CMS_2385" /old_locus_tag="CMS2385" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001711046.1" /db_xref="GI:170782712" /db_xref="GeneID:6157988" /translation="MTQPEQILPPDLFLALDRSGPVPLYYQVANLLETAIHDGTLPAG ARLENEIALGNRLGLSRPTIRRAIQDLVDKGLLVRRRGIGTQVVHGRVTRNVELTSLY EDLERQGQAPATTMLSSSRGEADEKVAEALGVAVGSPVLHLTRLRTADGVPLAILDNV LPEPFVDLDPDELATHGLYQLLRGRGVIMRVAKQRIGARAATASEARLLDLPRGGAVL TMSRTAFDSSGRAVEYGQHCYRPDLYSFEITLVDR" misc_feature complement(2528451..2528867) /locus_tag="CMS_2385" /old_locus_tag="CMS2385" /inference="protein motif:HMMPfam:PF07702" /note="HMMPfam hit to PF07702, UbiC transcription regulator-associated, score 7.5e-47" misc_feature complement(2528925..2529116) /locus_tag="CMS_2385" /old_locus_tag="CMS2385" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 5.1e-15" misc_feature complement(2528979..2529044) /locus_tag="CMS_2385" /old_locus_tag="CMS2385" /note="Predicted helix-turn-helix motif with score 1631.000, SD 4.74 at aa 27-48, sequence ENEIALGNRLGLSRPTIRRAIQ" gene complement(2529239..2530162) /locus_tag="CMS_2386" /old_locus_tag="CMS2386" /db_xref="GeneID:6157989" CDS complement(2529239..2530162) /locus_tag="CMS_2386" /old_locus_tag="CMS2386" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_001711047.1" /db_xref="GI:170782713" /db_xref="GeneID:6157989" /translation="MTAETSPSASAASEPLAGAIPGAAEEAGGRPTPPLPPVGTTILE VRDIGKSYGAVNALTGVSTVVAAGQVTCVLGDNGAGKSTFIKMLAGVHAPSEGTMLLD GEPVTLGSPRAALQAGIATVYQDLAVVPLMPVWRNFFLGSEITKGKGPFRRLDVKAMK AVTHEQLAQMGIDLRDVDQPIGTLSGGERQCVAIARAVHFGARVLILDEPTAALGVKQ SGVVLRYIARSRDRGLGVVFITHNPHHAFPVGDRFLLLNRGSSLGTFEKDEITLGELT SLMAGGAELDSLAHELARDPGPDGGRAAADR" misc_feature complement(2529386..2529961) /locus_tag="CMS_2386" /old_locus_tag="CMS2386" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.7e-47" misc_feature complement(2529569..2529613) /locus_tag="CMS_2386" /old_locus_tag="CMS2386" /note="PS00211 ABC transporters family signature." misc_feature complement(2529917..2529940) /locus_tag="CMS_2386" /old_locus_tag="CMS2386" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2530159..2531202) /locus_tag="CMS_2387" /old_locus_tag="CMS2387" /db_xref="GeneID:6157990" CDS complement(2530159..2531202) /locus_tag="CMS_2387" /old_locus_tag="CMS2387" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="YP_001711048.1" /db_xref="GI:170782714" /db_xref="GeneID:6157990" /translation="MTTTDIVTIATRPRLEDRPIRKILARPEIGALVAALAVLVFFSL YTPQFLTLAGAGVWLESASTFGIMAVAVAMLMIGGEFDLSAGVMTGFSALVVGILTSH YGLSIWVAVLVSLAAALAIGALNGFLVMKTGLPSFIVTLGTFFALAGVDLAVTKLITG QVAIQGMTKVPSYDAIQPIFGSSLGIGGGNFYVSVLWWFLVAAVATWILLRTRAGNWI FAVGGAKESARQVGVPVLKTKIGLFMGTAGAAWLVGMISLFRTSTVQANTGVGQEFIY IICAVVGGCLLTGGFGSAIGAALGALIYGMVFQGITFAQWDTNWLRTILGVMLLAAVL LNNLVRTRAGGGR" misc_feature complement(order(2530186..2530245,2530288..2530383, 2530417..2530485,2530600..2530668,2530726..2530794, 2530822..2530890,2530909..2531004,2531047..2531115)) /locus_tag="CMS_2387" /old_locus_tag="CMS2387" /note="8 probable transmembrane helices predicted for CMS2387 by TMHMM2.0 at aa 30-52, 67-98, 105-127, 137-159,179-201, 240-262, 274-305 and 320-339" misc_feature complement(2530204..2531043) /locus_tag="CMS_2387" /old_locus_tag="CMS2387" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 4.9e-68" gene complement(2531304..2532266) /locus_tag="CMS_2388" /old_locus_tag="CMS2388" /db_xref="GeneID:6157991" CDS complement(2531304..2532266) /locus_tag="CMS_2388" /old_locus_tag="CMS2388" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711049.1" /db_xref="GI:170782715" /db_xref="GeneID:6157991" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2531316..2531858) /locus_tag="CMS_2388" /old_locus_tag="CMS2388" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.5e-37" misc_feature complement(2531943..2532008) /locus_tag="CMS_2388" /old_locus_tag="CMS2388" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 10-31, sequence AGPARLAPVTGVPSRTISRILR" gene complement(2532364..2533974) /locus_tag="CMS_2389" /old_locus_tag="CMS2389" /db_xref="GeneID:6157992" CDS complement(2532364..2533974) /locus_tag="CMS_2389" /old_locus_tag="CMS2389" /codon_start=1 /transl_table=11 /product="putative surface polysaccharide transport protein" /protein_id="YP_001711050.1" /db_xref="GI:170782716" /db_xref="GeneID:6157992" /translation="MPASPASAPAPETPPAATQGLGARAARGAIVTIGAQLIRILIQV ASVVVLARLLTPTDYGLLAMVLAIIGVGEIFRDFGLSNAAIQARDLSRTQRDNLWWIN AGIGLVLAALVFCAAWPLAAVFGHDELIPIAHALSLTFVFNGLATQYRASLTRSLRFR ALATADVTAPAVALLVAVGGALLGWGYWALVAQQLTQTLVLLGLAVGFARWIPRLPRR GEPMGPLLRFGWNMVSSQMVGYVSNNIDTFLVGLRFGAGSLGIYNRAFQLLMTPLAQI RSPLTTVAIPVLSRLADEQRRFADYVARGQLALGYTLGAGLGLVAATAVPITAVFLGP QWDSVAPILRLLAIAGIFDTLAFVGYWVYVSRGLTGDLFRFSLLSAVIKISCILIGSS FGIVGIAAGYAAAPAICWPISLWWLSRKAPIPTRRLYMGALRIIGVVGSVSVVTGALL AMVDTGSDALQLLAGVGTTAVLYALAVALVPAVRRDVRGVLDLARVLPKARRGSAASA PAPDSTTDPAPAGDPASDRADAPARVPS" misc_feature complement(order(2532523..2532591,2532619..2532687, 2532724..2532792,2532802..2532861,2532880..2532948, 2532976..2533044,2533339..2533398,2533408..2533476, 2533534..2533587,2533615..2533683,2533720..2533788)) /locus_tag="CMS_2389" /old_locus_tag="CMS2389" /note="11 probable transmembrane helices predicted for CMS2389 by TMHMM2.0 at aa 63-85, 98-120, 130-147, 167-189,193-212, 311-333, 343-365, 372-391, 395-417, 430-452 and 462-484" misc_feature complement(2533099..2533902) /locus_tag="CMS_2389" /old_locus_tag="CMS2389" /inference="protein motif:HMMPfam:PF01943" /note="HMMPfam hit to PF01943, Polysaccharide biosynthesis protein, score 1.6e-50" gene complement(2534237..2535286) /gene="kanE" /locus_tag="CMS_2390" /old_locus_tag="CMS2390" /db_xref="GeneID:6157993" CDS complement(2534237..2535286) /gene="kanE" /locus_tag="CMS_2390" /old_locus_tag="CMS2390" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711051.1" /db_xref="GI:170782717" /db_xref="GeneID:6157993" /translation="MSVPARPPGRDLVVLQSSQAPRPTTNPYIVMLGRALAATPGVRP LHFSWRTALLGRYDVFHVHWPEILVDGHSPLKKAVRQALTVALLAKLTLRRIPIVRTV HNLERPQGISRRESLLLALMERMTTLRVRVNPITEIPADQPHVTILHGHYRDWFRDEP RADAEPGRLGYVGLVRRYKGVEQLVAAFRGAGDAGADLSLRIGGNPSSEELAGTIRAL AAGDDRIRLDLRFQSDAELVDIVTSSELVVLPYRFMHNSGGALAALSLDRPVLVPDNA VNRALAEEVGPGWIHLFDGDLTPDELLRATEAVQTGARATAPDLRARDWDRAGAQHAS AYRRALRIRRGVERG" gene 2535445..2537388 /locus_tag="CMS_2391" /old_locus_tag="CMS2391" /db_xref="GeneID:6158777" CDS 2535445..2537388 /locus_tag="CMS_2391" /old_locus_tag="CMS2391" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="YP_001711052.1" /db_xref="GI:170782718" /db_xref="GeneID:6158777" /translation="MPRPALLAVVVVNYGSADLVRENVLPLVERLDDALLVVVDNRTT HAERERVRELAAHPSTRVHGVYPDANTGFGTGMNIGVAAVRDLGAREFLLLNPDATIE PDQLAVLRGVVAADPLALVAPLILRPDGSTWFRGSDLYLADGRIRSAARRAQHPGQAV EPWLTGACLLVTDELWTRVGGFSDDYFLYWEDVDLSRKVVEAGGSLAVVEQAVAVHAE GGTQSAGHESAGQAKSGTYYYHNIRNRLLYGARHLDAPALRRWRLLTPVIAYEVLLQG GRRQFAHPVAPVTAAVRGIRDGYRLSGGWRAMPSPAPTSAAPAAPVRPVAPASSLVVA ILTYRRPDDIRAVLPLVAAQAADLREAAEADRTLPRSVRIVVVDNDPAGGAGAAVEDA AADSPVPIAYVHEPTPGISAARNRALDAAGDDDLLVFLDDDERPDPGWLAALVRARQA TGSAGVAGPVRSEYEVEPDAWVRAGGFFTRRRPATGTRLEVAATNNLLLDLRAVRTAG LRFDVDLGTQGGEDTLFTRQLVAAGALLTWCAEAGVVDVVPRARTTRRWVVLRAFSSG NSWSLTSVALAPASPAARTRIRAEATARGLVRALGGTGRIAVGAVTGSVAHRAKGTRT LARGAGMVAGAFGWSYQEYARRD" misc_feature 2535466..2536029 /locus_tag="CMS_2391" /old_locus_tag="CMS2391" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 0.0023" misc_feature 2536438..2536968 /locus_tag="CMS_2391" /old_locus_tag="CMS2391" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 1e-17" gene 2537603..2538265 /locus_tag="CMS_2392" /old_locus_tag="CMS2392" /db_xref="GeneID:6157994" CDS 2537603..2538265 /locus_tag="CMS_2392" /old_locus_tag="CMS2392" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711053.1" /db_xref="GI:170782719" /db_xref="GeneID:6157994" /translation="MPAPESTPSDLRPRRSPEQRSRRARTRRTTVAVIGAASVLAVAA VVGTVVVNGSGSDAPAAAADTKDWSEVAPTAGATEAPALLPDGDTRALGQEVATTVGL DETATFPGSIQARIVSVTPTSTDGGRVGELSGDAVDVRLELVNVTGETVAVDSVAVNV FYGADRTPATPADSDTVIRGSLEPGASATGDYVFSVPAASADAISVVVARDAGSPVVV FQ" sig_peptide 2537603..2537788 /locus_tag="CMS_2392" /old_locus_tag="CMS2392" /note="Signal peptide predicted for CMS2392 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.518 between residues 62 and 63" misc_feature 2537687..2537755 /locus_tag="CMS_2392" /old_locus_tag="CMS2392" /note="1 probable transmembrane helix predicted for CMS2392 by TMHMM2.0 at aa 29-51" gene complement(2538390..2539616) /locus_tag="CMS_2393" /old_locus_tag="CMS2393" /db_xref="GeneID:6157995" CDS complement(2538390..2539616) /locus_tag="CMS_2393" /old_locus_tag="CMS2393" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711054.1" /db_xref="GI:170782720" /db_xref="GeneID:6157995" /translation="MFIPTRAAGLEALHDFVDRAGPAYARDRNHDLGASRDNVSGLSP YLRHRLVTEQEVVAAVLARHSLSAAEKFVQEVFWRTYWKGWLEQNPEAWRRYRRDVEE LTAGDLPTGYLDAVGGRSGIDAMDAWVRELVETGYLHNHTRMWFASIWIFTLGLPWQL GADFFHRHLLDGDAASNTLSWRWVAGLQTRGKTYLASAANIARYTEGRFSPAGLAVTA PARTEEPLPPRAALDPEDVVGTVGERTGLLLHEEDLEAESLLAERPGLVDQLASSAVS ADAAERSPLAVSDAVRDFTTAALADAASRTHDSSGRPARVLADAGCETVIDWVRSDRL DTVIVPYAPVGPVQERHDRLRRALADEGVAMVTVRRRWDGTAWPMASRGFFPFRERIP ALVRDLGTAPDAGRLF" misc_feature complement(2539038..2539061) /locus_tag="CMS_2393" /old_locus_tag="CMS2393" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2539813..2540316 /locus_tag="CMS_2394" /old_locus_tag="CMS2394" /db_xref="GeneID:6157996" CDS 2539813..2540316 /locus_tag="CMS_2394" /old_locus_tag="CMS2394" /codon_start=1 /transl_table=11 /product="putative DNA-binding membrane protein" /protein_id="YP_001711055.1" /db_xref="GI:170782721" /db_xref="GeneID:6157996" /translation="MNETRVTDLRTQRGWTQERLAKTSGITVRTVQRLEAGNDASLDT LTRVAKALEVQVRDLFTTVDESDYGRAVTGLDARAARQQERRDTITDGLEALYYGIGA LFTIAVIVGVASDAFHNLAIFLIPAYWIAGWLLSLFLFLVIVSPRLYRRYPLSRDRKQ PTSDART" misc_feature 2539828..2539989 /locus_tag="CMS_2394" /old_locus_tag="CMS2394" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 4.4e-13" misc_feature 2539855..2539920 /locus_tag="CMS_2394" /old_locus_tag="CMS2394" /note="Predicted helix-turn-helix motif with score 1820.000, SD 5.39 at aa 29-50, sequence WTQERLAKTSGITVRTVQRLEA" misc_feature order(2540095..2540163,2540176..2540244) /locus_tag="CMS_2394" /old_locus_tag="CMS2394" /note="2 probable transmembrane helices predicted for CMS2394 by TMHMM2.0 at aa 109-131 and 136-158" gene 2540415..2540954 /gene="apt" /locus_tag="CMS_2395" /old_locus_tag="CMS2395" /db_xref="GeneID:6157997" CDS 2540415..2540954 /gene="apt" /locus_tag="CMS_2395" /old_locus_tag="CMS2395" /EC_number="2.4.2.7" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="YP_001711056.1" /db_xref="GI:170782722" /db_xref="GeneID:6157997" /translation="MVDHATQLLGRRHVLERFQWIDGDADTWTTLRDPAALRAVVHAL ADLLADRELDVIVGIEARGFVLGPAVAIALGLGFSPIRKNGVKFPGDVIRHRSTPDYR GRTQVFEARRDHFSTGQRVGLVDDWIETGSQAVAAQRLIATAGAELTAVAVIVDEASE DVRHVLPPISSIVSASGLP" misc_feature 2540490..2540903 /gene="apt" /locus_tag="CMS_2395" /old_locus_tag="CMS2395" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 2.9e-13" gene 2541026..2541676 /locus_tag="CMS_2396" /old_locus_tag="CMS2396" /db_xref="GeneID:6158598" CDS 2541026..2541676 /locus_tag="CMS_2396" /old_locus_tag="CMS2396" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001711057.1" /db_xref="GI:170782723" /db_xref="GeneID:6158598" /translation="MCMPEESVAEFAKRAGVSPRRVRALIEQGAIPARQVGRQWLIDQ SCAHRPAASRPLADRMRANLLAILSGDAPEGLSASERARLRSYRDELMHSPEPDRILG AWVREQAPLKLQVAASDLADLAADERIVKSGFSDPRAGIAAAGQLEARVAKDDAAAIR RAYLLRPSERPNVLLHLADERPPSPLPLGMLLVDLAQHDGVRERSRVAELLREVDT" misc_feature 2541041..2541106 /locus_tag="CMS_2396" /old_locus_tag="CMS2396" /note="Predicted helix-turn-helix motif with score 1537.000, SD 4.42 at aa 6-27, sequence ESVAEFAKRAGVSPRRVRALIE" misc_feature 2541044..2541151 /locus_tag="CMS_2396" /old_locus_tag="CMS2396" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 0.00057" gene 2541673..2542419 /locus_tag="CMS_2397" /old_locus_tag="CMS2397" /db_xref="GeneID:6157998" CDS 2541673..2542419 /locus_tag="CMS_2397" /old_locus_tag="CMS2397" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711058.1" /db_xref="GI:170782724" /db_xref="GeneID:6157998" /translation="MTITAPAMTPAQAEAWHALFEVYKAHPEGWALVGGQMVHSLCWE REASPPRPTQDADAVLDIRAQPTMLFDFTKTLTDLGYESAGESPSILEGMKGVQHRWV KGDAQIDVLIPRFLGERADNRTGVTGGRTIAAPGGQGALDRSEVIEVAVEGVTGTVIR PTLQGAIVAKASAMLIGEGAKADRHLNDLSILASLVTRGDRVGEDVTRTEVARVRAAF AMVLARPPLHLSVGVDAETIGIVRDQFVLE" gene 2542416..2542682 /locus_tag="CMS_2398" /old_locus_tag="CMS2398" /db_xref="GeneID:6157999" CDS 2542416..2542682 /locus_tag="CMS_2398" /old_locus_tag="CMS2398" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711059.1" /db_xref="GI:170782725" /db_xref="GeneID:6157999" /translation="MRAGGRWMVFLRVTESKSMKNRLHLCLRPAGTTRDAEVERILAL GARMVDDRRATDRRATDGWAVPADPEGDESCVLGTSAEDAGISE" gene complement(2542672..2544036) /locus_tag="CMS_2399" /old_locus_tag="CMS2399" /db_xref="GeneID:6158000" CDS complement(2542672..2544036) /locus_tag="CMS_2399" /old_locus_tag="CMS2399" /codon_start=1 /transl_table=11 /product="putative surface polysaccharide biosynthesis protein" /protein_id="YP_001711060.1" /db_xref="GI:170782726" /db_xref="GeneID:6158000" /translation="MTLHEFTALLRRLWYVVVAATLAGGAVAFGLSQLATPVYTAQSR LYFSLSSGSSASDLNQGATYTQSQMLSFGELAESPAVLEPVITRLGLDVTPQELARAV TVTTPQNTVIMEISVTEPSPSDAAQIANAVATSLRDTAEAYAPKGAEGSTTVSVRVIQ EAPEPQSQSAPNSRTNTLAGLLLGLLAGLLGLALVRLLDTRVRSAETVAHLTSAPLLG SLERERGVTGLAMALRPLSTAAEGFRQLKANLRFVLLGDRSSSIVVTSSIPGEGKSTV AANLALSLSEGGRRVLLVDADLRRPVVAQYLGLEGDAGLTTVLVGQALLEDVVQPWGD GTLHVLTSGEIPPNPSELLASNRMEELVTRAKADYDVIVIDTAPLIAVADAAFVARMT DGAIVVADQTRVHRAQLSEALDAVEKSGGSVLGVVLNKARPTKDKRAYYRAEAGQAGQ AVTR" sig_peptide complement(2542672..2542791) /locus_tag="CMS_2399" /old_locus_tag="CMS2399" /note="Signal peptide predicted for CMS2399 by SignalP 2.0 HMM (Signal peptide probability 0.971) with cleavage site probability 0.507 between residues 40 and 41" misc_feature complement(2543632..2544036) /locus_tag="CMS_2399" /old_locus_tag="CMS2399" /inference="protein motif:HMMPfam:PF02706" /note="HMMPfam hit to PF02706, Lipopolysaccharide biosynthesis, score 8.3e-18" misc_feature complement(2543932..2544000) /locus_tag="CMS_2399" /old_locus_tag="CMS2399" /note="1 probable transmembrane helix predicted for CMS2399 by TMHMM2.0 at aa 13-35" gene complement(2544033..2545403) /locus_tag="CMS_2400" /old_locus_tag="CMS2400" /db_xref="GeneID:6158001" CDS complement(2544033..2545403) /locus_tag="CMS_2400" /old_locus_tag="CMS2400" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711061.1" /db_xref="GI:170782727" /db_xref="GeneID:6158001" /translation="MSALLAGSGLQTLLVLGIALAGGALLLLVLRRMPRTAVGLWLVV LSFVPVWSGVPLGGYHLPPSTVAAVLVILAIVPVPGFRVSPLDVLVVLMTAAGFAGVV VGGGAGIGMSTLVTFLTYALPGYLLGRLAAHRIGMASLERIVAVVFTVVAALAIVEFV TGWNPFVLLPGNAGLRETWATLQGRGGIVRAEGAYGHSIALGSALAIAIPLTLASRFG LVARLGMTAVMMLGAVLTFSRVGMLGAVLGLVLSIVFLRDAISIRVRATVTAGIVVVA AAVAPFVQSVFDDAGTEASASSDYRGDLYGLVPGMGILGTTPEAHRGSDGRVFFGPFR SIDSQLVLTGLTFGLLVAGAVLVALAVGVWLVLRGHATAAIIALVAQIPALASVALIT QYATLVWFLAGVAATSQILRRDAVPLPAPPPGPAAAPADADLDAHPDPARTTAPQLLP GRTPSR" misc_feature complement(order(2544192..2544260,2544303..2544371, 2544543..2544611,2544639..2544707,2544744..2544812, 2544906..2544974,2545011..2545064,2545074..2545142, 2545161..2545214,2545227..2545295,2545314..2545376)) /locus_tag="CMS_2400" /old_locus_tag="CMS2400" /note="11 probable transmembrane helices predicted for CMS2400 by TMHMM2.0 at aa 10-30, 37-59, 64-81, 88-110,114-131, 144-166, 198-220, 233-255, 265-287, 345-367 and 382-404" gene complement(2545575..2546537) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /db_xref="GeneID:6158002" CDS complement(2545575..2546537) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711062.1" /db_xref="GI:170782728" /db_xref="GeneID:6158002" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2545587..2546129) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" misc_feature complement(2546214..2546279) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2546279..2546400) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2546400..2546465) /locus_tag="CMS_2401" /old_locus_tag="CMS2401" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2546788..2547206) /locus_tag="CMS_2402" /old_locus_tag="CMS2402" /pseudo /db_xref="GeneID:6158003" gene 2547403..2548809 /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /db_xref="GeneID:6158004" CDS 2547403..2548809 /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /codon_start=1 /transl_table=11 /product="putative amino acid permease" /protein_id="YP_001711063.1" /db_xref="GI:170782729" /db_xref="GeneID:6158004" /translation="MPSAPQLHKSLTQRQLTMIAIGGVIGAGLFVGSGVVINGAGPGA FLTYAISGVLIILVMRMLGEMATANPSTGSFTDYARHALGGWAGFSMGWLYWYFWVIV VGFEAVAGAKALTYWFDAPLWLLSLGLMALMTATNLISVGAFGEFEYWFAGIKVAAII LFLGLGSLYVMGIWPGRSLDFSNLVANGGFFPNGVGAIFSSVVVVIFSMVGAEIATIA AAESKDPAKAIRKSTNSVILRISLFFVGSLFLLAVILPWDSTELGASPFVSAFDRMGI PFAGDVMNAVVLTAVLSCLNSGLYTASRMLFVLAARREAPARLVKVTERGVPRAAILL SSVVGFLCVIAAAVSPDTVFLFLLNSSGAIILFVYLLISISQIVLRRRSGSAGLPVKM WLFPGLSIVTVVGILAVLAQMALDPEIRPQLVLSLVAWAVVLVLYVVTKARGGSVDPA DATTDAAPEVAVPAAREA" sig_peptide 2547403..2547519 /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /note="Signal peptide predicted for CMS2403 by SignalP 2.0 HMM (Signal peptide probability 0.951) with cleavage site probability 0.650 between residues 39 and 40" misc_feature 2547445..2548752 /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 5.4e-133" misc_feature order(2547445..2547513,2547532..2547591,2547634..2547693, 2547697..2547756,2547766..2547834,2547853..2547921, 2547979..2548047,2548105..2548173,2548231..2548299, 2548378..2548446,2548459..2548518,2548579..2548647, 2548657..2548716) /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /note="13 probable transmembrane helices predicted for CMS2403 by TMHMM2.0 at aa 15-37, 44-63, 78-97, 99-118,122-144, 151-173, 193-215, 235-257, 277-299, 326-348,353-372, 393-415 and 419-438" misc_feature 2547520..2547612 /locus_tag="CMS_2403" /old_locus_tag="CMS2403" /note="PS00218 Amino acid permeases signature." gene 2548854..2549546 /locus_tag="CMS_2404" /old_locus_tag="CMS2404" /db_xref="GeneID:6158005" CDS 2548854..2549546 /locus_tag="CMS_2404" /old_locus_tag="CMS2404" /codon_start=1 /transl_table=11 /product="putative phosphatase" /protein_id="YP_001711064.1" /db_xref="GI:170782730" /db_xref="GeneID:6158005" /translation="MATVILVRHGRTTANATGILAGRTPGVDLDDTGRDQADRAGDRL AAVPLAAVVSSPLQRCWETAQRILERQQGTPPQPVDPDLTECDYGDWQGRPLSALATE DLWKTVQAHPSAVVFPGGESMAGMQARAVAAIRRHDAAIEAEHGPGAVWVAVSHGDVI KSILADAYGMHLDLFQRIDVGPASLSIVRYGAGRPTVHATNTDAGDLSWLAAGTGAGD APVGGGAGHTTP" misc_feature 2548857..2549450 /locus_tag="CMS_2404" /old_locus_tag="CMS2404" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 1.1e-16" gene 2549612..2550127 /locus_tag="CMS_2405" /old_locus_tag="CMS2405" /db_xref="GeneID:6158006" CDS 2549612..2550127 /locus_tag="CMS_2405" /old_locus_tag="CMS2405" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711065.1" /db_xref="GI:170782731" /db_xref="GeneID:6158006" /translation="MVGTIGLPGARTFYFQVRSGPQLVTIALEKQQSALLAKKIDEIL DQLVTVEGNPFSIPESTPPELVDNDPLEEVDERWRTGAMGLGWDPTKAQVVIEAYPLA EDDDSDDFDLPSADDDAADTEMLVVRMPVGAARAFAKRTHEIVGAGRPICALCGYPID PDGHIHTFPDE" gene 2550124..2550894 /locus_tag="CMS_2406" /old_locus_tag="CMS2406" /db_xref="GeneID:6158007" CDS 2550124..2550894 /locus_tag="CMS_2406" /old_locus_tag="CMS2406" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711066.1" /db_xref="GI:170782732" /db_xref="GeneID:6158007" /translation="MMSETDPLDGELILTGRIRTASNATFLGTIGDTVVVYKPIRGEN RLWDFPDAVLAHREVAACIVSEALGWGIVPRTWLRDGPAGEGMVQLWQDEDPDQDAVD LLPVDEVPETGYKTVLGGEDEDGNTVALIHEDTPALRRMAVFDVIVNNADRKGFHVLA MPDGHRFGVDHGLTFHEEHKLRTVLWGWVGEPLTAEELEGVDRVLAGLDGELGRELAE LLTAEEVAALAERCTRLRAEARFPAPAGQQSAVPWPLF" misc_feature 2550205..2550819 /locus_tag="CMS_2406" /old_locus_tag="CMS2406" /inference="protein motif:HMMPfam:PF00454" /note="HMMPfam hit to PF00454, Phosphatidylinositol 3- and 4-kinase, score 8.4e-05" gene complement(2550947..2551123) /locus_tag="CMS_2407" /old_locus_tag="CMS2407" /pseudo /db_xref="GeneID:6158008" misc_feature complement(2551172..2553550) /note="submitted with no further information" gene 2551352..2552689 /locus_tag="CMS_2408" /old_locus_tag="CMS2408" /db_xref="GeneID:6158009" CDS 2551352..2552689 /locus_tag="CMS_2408" /old_locus_tag="CMS2408" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711067.1" /db_xref="GI:170782733" /db_xref="GeneID:6158009" /translation="MISSASVTGLVGEFDHTISLEADWEFAIAYGLNGVGKTKFLELI NAAINVDMGRLATAWFATLELRADDGDYLQVEKLVHFPDPNAPDDEPTEKVVYRYASP RQNDIIEWLAPVEDDINLRRRIQKMTPYIPIPGSSDLWRDPGDGEIIDYAELRMRYGT PRTRAYARAQPPEQLQAFLDRNATYLIETQRLATIPPPTNRARSNSQSSPKWNVEAYA GDLRQRIERSLAENSLASQRLDRSFPGRIIAQHVQDTLSEEAIRHEYLQQDIQRRRLV EIGLTSAEMDVPLPDQRLQDWQRAVLTTYLKDNAAKLATFDDLLQRITLLVELVNARF LRKEIRVNADDGLTVQSLTTGQSIPASGLSTGEQHELVLMYNLLFRVHPGTLVLIDEP EISLHVTWQKHFLADVARVAELRGFRFIVATHSPQIIGRWWSRTVELGPGEDA" misc_feature 2551442..2551465 /locus_tag="CMS_2408" /old_locus_tag="CMS2408" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2552682..2553485 /locus_tag="CMS_2409" /old_locus_tag="CMS2409" /db_xref="GeneID:6158010" CDS 2552682..2553485 /locus_tag="CMS_2409" /old_locus_tag="CMS2409" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711068.1" /db_xref="GI:170782734" /db_xref="GeneID:6158010" /translation="MLDDLDGTDLFNALMMEADKEHFKVVVVEGESDFNLLADFVLQA DVDLVVEYGKDSLLEASKLAIDELPSALFVVNADFDRLTGAITNFASNVIAAEYYDLY MDAYFADPKSMTRIARRYLEGSTLGVDEGLRRAWDMALLIGGTRYTSVSKQYDLTMQN FPVHIVMHGESCEAHINSIADLAILRSKAGVATSASVASATQEATESIDHALLVNSHD FLAALSVCCSRRGDKKVAHKMDDLFELSIDRAVFTELAIVRRVREHIAA" gene complement(2553585..2554658) /locus_tag="CMS_2410" /old_locus_tag="CMS2410" /db_xref="GeneID:6158011" CDS complement(2553585..2554658) /locus_tag="CMS_2410" /old_locus_tag="CMS2410" /note="translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1" /codon_start=1 /transl_table=11 /product="GTP-dependent nucleic acid-binding protein EngD" /protein_id="YP_001711069.1" /db_xref="GI:170782735" /db_xref="GeneID:6158011" /translation="MALTIAIVGLPNVGKSTLFNALTKNQVLAANYPFATIEPNVGVV NLPDPRLEVLAGLFGSEKILYAPVSFVDIAGIVRGASEGEGLGNQFLANIREADAIAQ VVRAFTDEDVVHVDGRVDAASDMETINTELILADLQTLERAEPRYEKELKTKRIEPVV LETAKAAREWLDSGKPLSASSIDLDPVRELGLLTAKPFIYVFNVDEDVLGDTARLAEL AALVAPAKAVFLDAKIESELIELDPEDAAEMLASTGQEESGLDQLARIGFETLGLQTY LTAGPKETRAWTIGKGWKAPQAAGVIHTDFEKGFIKAEVISYDDLVETGTIAEARAKG KARIEGKEYVMQDGDVVEFRFNN" misc_feature complement(2553591..2553842) /locus_tag="CMS_2410" /old_locus_tag="CMS2410" /inference="protein motif:HMMPfam:PF06071" /note="HMMPfam hit to PF06071, Conserved hypothetical protein 92, score 1.2e-58" misc_feature complement(2554188..2554652) /locus_tag="CMS_2410" /old_locus_tag="CMS2410" /inference="protein motif:HMMPfam:PF01926" /note="HMMPfam hit to PF01926, GTP-binding protein,HSR1-related, score 1.1e-34" misc_feature complement(2554611..2554634) /locus_tag="CMS_2410" /old_locus_tag="CMS2410" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2554738..2555388 /locus_tag="CMS_2411" /old_locus_tag="CMS2411" /db_xref="GeneID:6158012" CDS 2554738..2555388 /locus_tag="CMS_2411" /old_locus_tag="CMS2411" /codon_start=1 /transl_table=11 /product="putative exonuclease" /protein_id="YP_001711070.1" /db_xref="GI:170782736" /db_xref="GeneID:6158012" /translation="MRGRLEPMPLDFTAIDFETANNSSASACSVGLVKVRDGVVVDTA SWLIRPPAGHDSFSVWNTRIHGIVEDDVADADGWADQLPRLMAFAGDDHLVAHNARFD MGVIQGACKATALIAPPYSYLCSLQVARRTYTLDSYRLPVAARAAGFEDFSHHEALAD ARACAAIVVHAADRHGAASLADLAEASGVGMGRIGAPRMQTVTQASAAATPPIDWA" misc_feature 2554771..2555241 /locus_tag="CMS_2411" /old_locus_tag="CMS2411" /inference="protein motif:HMMPfam:PF00929" /note="HMMPfam hit to PF00929, Exonuclease, score 2.7e-19" gene 2555477..2556856 /gene="rmuC" /locus_tag="CMS_2412" /old_locus_tag="CMS2412" /db_xref="GeneID:6158013" CDS 2555477..2556856 /gene="rmuC" /locus_tag="CMS_2412" /old_locus_tag="CMS2412" /codon_start=1 /transl_table=11 /product="putative DNA recombination protein" /protein_id="YP_001711071.1" /db_xref="GI:170782737" /db_xref="GeneID:6158013" /translation="MDPVIALLVGLIIGLAVGAVVGLAVSRARSGVDAPGRAGEAARL AAAEATVTALREQLDRTERLAEEQVAQTTAQFAERAQTQDALHRERLDAQESHLREQI GQQEDRIAELQTRLREIQRAEVARTEEDGRVLTALSPVAESLKQVQAKVHELEEQRRQ QHGELSEQLRSATEAEERLRATAETLASALRSNSTRGVWGETQLRSVVEAAGLIHRVD FDVQTSVSTAQGIGRPDMVVHLPGGKNIAVDAKAPFTAYLEASAIPASATGPEGARRD ALMKQHVQAVRDHITALGSRAYWEGLDASPEMVIAFIPSESLVSSALEADPSIMEFAF SRRVALSSPVTLWSVLKTVAFSWQQEVLTEDAKQLFDLSRELHARLATSGEHIAKLGR SLTGAVGDYNRVVGSLERQVLPTARRLSRLDESKVIGTLEPLEATTRELSADEFTSRR SPVAESPAG" sig_peptide 2555477..2555560 /gene="rmuC" /locus_tag="CMS_2412" /old_locus_tag="CMS2412" /note="Signal peptide predicted for CMS2412 by SignalP 2.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.316 between residues 28 and 29" misc_feature 2555489..2555557 /gene="rmuC" /locus_tag="CMS_2412" /old_locus_tag="CMS2412" /note="1 probable transmembrane helix predicted for CMS2412 by TMHMM2.0 at aa 5-27" misc_feature 2555864..2556784 /gene="rmuC" /locus_tag="CMS_2412" /old_locus_tag="CMS2412" /inference="protein motif:HMMPfam:PF02646" /note="HMMPfam hit to PF02646, Protein of unknown function DUF195, score 5.5e-65" gene 2556962..2557987 /gene="fba" /locus_tag="CMS_2413" /old_locus_tag="CMS2413" /db_xref="GeneID:6158939" CDS 2556962..2557987 /gene="fba" /locus_tag="CMS_2413" /old_locus_tag="CMS2413" /EC_number="4.1.2.13" /note="catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase" /protein_id="YP_001711072.1" /db_xref="GI:170782738" /db_xref="GeneID:6158939" /translation="MPVATPEQYAEMLDRAKAGGFAYPAVNVSSSQTINAVLQGLTDA GSDGIIQVTTGGADYFSGHTVKNRAAGALAFARFATEVAKNYPITVALHTDHCPKDAL DGFVLPMIEASEEEVRAGRNPIFQSHMWDGSAIPLNENLGLATDLLPRMKAINAILEV EIGVVGGEEDGVSHDTGSHLYTTLEDAISTVEALGLGDKGRYMAALTFGNVHGVYKPG GVQLRPALLKEIQDGIQSKYGTGEKPFDLVFHGGSGSSDDEIAEAVRNGVVKMNIDTD TQYAFSRSIADSVLRNYDGFLKVHGEVGDKKTYDPRAWGKTAESAMAARVLEATRQLG SHGKSQS" misc_feature 2556977..2557978 /gene="fba" /locus_tag="CMS_2413" /old_locus_tag="CMS2413" /inference="protein motif:HMMPfam:PF01116" /note="HMMPfam hit to PF01116, Ketose-bisphosphate aldolase, class-II, score 2.3e-106" misc_feature 2557433..2557468 /gene="fba" /locus_tag="CMS_2413" /old_locus_tag="CMS2413" /note="PS00806 Fructose-bisphosphate aldolase class-II signature 2." gene complement(2558065..2558916) /locus_tag="CMS_2414" /old_locus_tag="CMS2414" /db_xref="GeneID:6158685" CDS complement(2558065..2558916) /locus_tag="CMS_2414" /old_locus_tag="CMS2414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711073.1" /db_xref="GI:170782739" /db_xref="GeneID:6158685" /translation="MSDDDGTRRPGRPAPRYGEYASPSSADAGGSSELSEADARIVAE AAEYRRAQAARDAPASAGRGGKKGGKASAPQTLAEQMAEERKAARERQQAERRDAEKA AADARRVAEKSAAAERRGARRSPGSAPASDPTSAAGSGATPGTRPERPDYLAGQEPRR APRRFDAAITVGLLAAGLVNVVGSIGANADPSRAINQSYALFGGGTYEVTPQTSVIGI AVNVVNIVVFVLAAWIALELVKRKRLAFWVPIAGAVVATVITSVLVLTLILADPAFQQ IMANRGP" misc_feature complement(order(2558107..2558175,2558209..2558277, 2558350..2558418)) /locus_tag="CMS_2414" /old_locus_tag="CMS2414" /note="3 probable transmembrane helices predicted for CMS2414 by TMHMM2.0 at aa 167-189, 214-236 and 248-270" gene complement(2558913..2559974) /gene="ispH" /locus_tag="CMS_2415" /old_locus_tag="CMS2415" /db_xref="GeneID:6158014" CDS complement(2558913..2559974) /gene="ispH" /locus_tag="CMS_2415" /old_locus_tag="CMS2415" /EC_number="1.17.1.2" /note="catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase" /protein_id="YP_001711074.1" /db_xref="GI:170782740" /db_xref="GeneID:6158014" /translation="MGAPVVSLSMPRMPGVRNRLKDNPVAGPKKVLLAAPRGYCAGVD RAVVAVEKALERYGAPVYVRKQIVHNVHVVSTLERMGAIFVEEVDEVPEGAHVVFSAH GVSPAVVQGAADRGLQAIDATCPLVTKVHREAVRFAKADMQILLIGHEGHEEVEGTAG EAPEQTIVVNSPEHADVIEVKDPDNLVWLSQTTLSVDETMETVRRLRARFPNLQDPPS DDICYATQNRQVAIKKVAVDADLVIVIGSANSSNSVRLVEVALEYGAKASYRVDYASE VKQEWLDGVNTVGVTSGASVPEVLVQELLDDLADAGYGDVTAVVTAEEDLVFSLPKEL RKDQSGNTDSRAIGGRTRA" misc_feature complement(2559042..2559884) /gene="ispH" /locus_tag="CMS_2415" /old_locus_tag="CMS2415" /inference="protein motif:HMMPfam:PF02401" /note="HMMPfam hit to PF02401, LytB protein, score 4.5e-151" misc_feature complement(2559726..2559755) /gene="ispH" /locus_tag="CMS_2415" /old_locus_tag="CMS2415" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." gene 2560050..2561366 /gene="xseA" /locus_tag="CMS_2416" /old_locus_tag="CMS2416" /db_xref="GeneID:6158776" CDS 2560050..2561366 /gene="xseA" /locus_tag="CMS_2416" /old_locus_tag="CMS2416" /EC_number="3.1.11.6" /note="bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII large subunit" /protein_id="YP_001711075.1" /db_xref="GI:170782741" /db_xref="GeneID:6158776" /translation="MSETRTVSMPAADAPTVDAPWPVSVLSGKIKGWIDRLGTAWVEG EITQWGGSGGNVYGKLKDLDVDATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVK GGTLTMQVLEMRHVGLGDLLERLERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKD SDAEKDVLRNAQLHWPSVRFRVVHTAVQGDRAAGEVTRAIGVLDEDPEVDVIVIARGG GDFQNLLVFSDEKLVRTAAACRTPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVP DVSEELSRVQQARARIGMRLTSQVRGEIDRIEQLRSRPVLASTSWIVDSRAEELGRYI ARSAELAGRVVERGMQQTSELSRQLRTLSPQHVLDRGYAIVQTADGSALRAPADAPDG TGLVLRLAAGALGATSTGPTDDIPSSAARLPASPAPDARPASGPES" misc_feature 2560167..2560397 /gene="xseA" /locus_tag="CMS_2416" /old_locus_tag="CMS2416" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 0.0015" misc_feature 2560674..2561132 /gene="xseA" /locus_tag="CMS_2416" /old_locus_tag="CMS2416" /inference="protein motif:HMMPfam:PF02601" /note="HMMPfam hit to PF02601, Exonuclease VII, large subunit, score 1.1e-23" gene 2561377..2561619 /gene="xseB" /locus_tag="CMS_2417" /old_locus_tag="CMS2417" /db_xref="GeneID:6159100" CDS 2561377..2561619 /gene="xseB" /locus_tag="CMS_2417" /old_locus_tag="CMS2417" /EC_number="3.1.11.6" /note="catalyzes the bidirectional exonucleolytic cleavage of DNA" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII small subunit" /protein_id="YP_001711076.1" /db_xref="GI:170782742" /db_xref="GeneID:6159100" /translation="MPTSPADTGARLPDVSELSYEEARDALVRVVNDLEQGASTLEES IALWERGEALAARCEEWLLGAKARLDAARTTAPDAG" misc_feature 2561428..2561610 /gene="xseB" /locus_tag="CMS_2417" /old_locus_tag="CMS2417" /inference="protein motif:HMMPfam:PF02609" /note="HMMPfam hit to PF02609, Exonuclease VII, small subunit, score 5.2e-19" gene 2561622..2562335 /locus_tag="CMS_2418" /old_locus_tag="CMS2418" /db_xref="GeneID:6159101" CDS 2561622..2562335 /locus_tag="CMS_2418" /old_locus_tag="CMS2418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711077.1" /db_xref="GI:170782743" /db_xref="GeneID:6159101" /translation="MAKDRTPNVVAELGRPETPEETAARKAADSRRHRAKQTFRNLLY SLIVTVATVAVIVALVPRSNTTILPDVDYGAAAAEAQGGFPQTLVVPDLPTAWKSNDA EIRPAGRDGVAVWYIGLITPSNRYIGISQGIDANATWLDETLQSAPEVSSEEIGGLDW TLYDNSQADEPGNVVLAASAVDGDSTYAIYGTADANELRTAIDAVAAARTAPAGATPS PSPADGTTSTTAPEEGNEG" misc_feature 2561742..2561801 /locus_tag="CMS_2418" /old_locus_tag="CMS2418" /note="1 probable transmembrane helix predicted for CMS2418 by TMHMM2.0 at aa 41-60" gene 2562332..2562994 /locus_tag="CMS_2419" /old_locus_tag="CMS2419" /db_xref="GeneID:6158015" CDS 2562332..2562994 /locus_tag="CMS_2419" /old_locus_tag="CMS2419" /EC_number="4.2.1.1" /codon_start=1 /transl_table=11 /product="putative carbonic anhydrase" /protein_id="YP_001711078.1" /db_xref="GI:170782744" /db_xref="GeneID:6158015" /translation="MTDQVETAQDDAVQAPAAVWAEMVEGNARFVAGTPEHPRQDVER RAALAHVQRPVAALFGCSDSRLAAEIIFDKGLGDLFVIRNAGQIISDSVLGSLEYAVA VLGVPLIVVLGHDECGAVRAAIESAAPGAEALPPHIAKLIAPIAPAVHRVAGDHVVPS EVDAGEVGRQHLRGTVTRMLEASEMISDRVAAGSLAIVGANYKLLEGTAVPDVIVGDI PR" misc_feature 2562476..2562976 /locus_tag="CMS_2419" /old_locus_tag="CMS2419" /inference="protein motif:HMMPfam:PF00484" /note="HMMPfam hit to PF00484, Carbonic anhydrase,prokaryotic and plant, score 4.6e-09" misc_feature 2562512..2562535 /locus_tag="CMS_2419" /old_locus_tag="CMS2419" /note="PS00704 Prokaryotic-type carbonic anhydrases signature 1." misc_feature 2562623..2562685 /locus_tag="CMS_2419" /old_locus_tag="CMS2419" /note="PS00705 Prokaryotic-type carbonic anhydrases signature 2." gene 2563079..2564506 /gene="fumC" /locus_tag="CMS_2420" /old_locus_tag="CMS2420" /db_xref="GeneID:6158016" CDS 2563079..2564506 /gene="fumC" /locus_tag="CMS_2420" /old_locus_tag="CMS2420" /EC_number="4.2.1.2" /note="class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="YP_001711079.1" /db_xref="GI:170782745" /db_xref="GeneID:6158016" /translation="MVDTSPGSDSSSADEFRIEHDTMGEVRVPRDALYAAQTQRAVEN FPISGRGLEPAQIQALARIKRAAAIVNGEMGIIDADVSAAIVSAADEVAGGSHHEHFP IDVYQTGSGTSSNMNMNEVLAALATASLGKPVHPNDHVNASQSSNDVFPTSVHVAVTG ALLAELIPALEHLAEVLEAKAGAWKGLVKAGRTHLMDATPVTFGQEFAGYARQIRLGI ERVRTALPRVAEVPLGGTATGTGINTPLGFPQKVIRVLADDTGLPITEALDHFEAQGA RDGLVDASGALRTLAVSLTKICNDIRWMGSGPNTGLGELHIPDLQPGSSIMPGKVNPV IPEAVLMVCARVIGNDATVAWAGASGLFELNVAIPVMGSSMLESIRILASSTRLLANR TVDGLRVNEEHARALAESSPSIVTPLNRIIGYEAAAKIAKHSVAQKMTVREAVVDLGY VERGEITEDQLDAGLDVLRMTAPGL" misc_feature 2563148..2564122 /gene="fumC" /locus_tag="CMS_2420" /old_locus_tag="CMS2420" /inference="protein motif:HMMPfam:PF00206" /note="HMMPfam hit to PF00206, Fumarate lyase, score 4.4e-129" misc_feature 2564045..2564074 /gene="fumC" /locus_tag="CMS_2420" /old_locus_tag="CMS2420" /note="PS00163 Fumarate lyases signature." gene complement(2564865..2566232) /locus_tag="CMS_2422" /old_locus_tag="CMS2422" /db_xref="GeneID:6158703" CDS complement(2564865..2566232) /locus_tag="CMS_2422" /old_locus_tag="CMS2422" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711080.1" /db_xref="GI:170782746" /db_xref="GeneID:6158703" /translation="MEWPVAPMDSQSSTARRASRGEETPQAERTYVLDTSVLLSDPRA LFRFAEHAVVIPVIVITELESKRNDPEIGYFARQALRLLDQLREEHERLDFPIEVGEA GGTLRVELNHSSMAALPNGLQLGDNDSRILAVALNLSTEGLAVTVVSKDMPLRVKAAS IGLMAEEYRAELAVDSGWTGMADVTLSSEQMADLYDGETLQTRVVQDLPVNTGVVLHS DRGSALGRVVRRGTVNLVRGDREVFGLKGRSAEQRLAIDLLLDREVGIVSLGGSAGTG KSALALCAALEAVLEKQQHRKIMVFRPLYAVGGQELGYLPGDAAEKMNPWAQAVFDTL GSVVSQNVMDEVVERGILEVLPLTHIRGRSLHDAFVIVDEAQSLERNVLLTVLSRIGQ NSRVVLTHDVAQRDNLRVGRHDGVASVIETLKGHELFGHITLTRSERSAIAALVTGLL DGDPV" misc_feature complement(2564880..2565503) /locus_tag="CMS_2422" /old_locus_tag="CMS2422" /inference="protein motif:HMMPfam:PF02562" /note="HMMPfam hit to PF02562, PhoH-like protein, score 7.6e-34" misc_feature complement(2565399..2565422) /locus_tag="CMS_2422" /old_locus_tag="CMS2422" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2566436..2567221) /gene="uppS" /locus_tag="CMS_2423" /old_locus_tag="CMS2423" /db_xref="GeneID:6158017" CDS complement(2566436..2567221) /gene="uppS" /locus_tag="CMS_2423" /old_locus_tag="CMS2423" /EC_number="2.5.1.31" /codon_start=1 /transl_table=11 /product="putative undecaprenyl pyrophosphate synthetase" /protein_id="YP_001711081.1" /db_xref="GI:170782747" /db_xref="GeneID:6158017" /translation="MREKPIRPWRGLLYRAYQKRIRRGLDRNALPHHIAMILDGNRRW ARQLGLESAAHGHRAGAAKFLEFLEWCDDLDIKVTTLYLLSTDNLTGRGSAELTALID IIGELAEDLSKHRDWRVKHVGSDEGLPPELIARLDASEERSQGNGGLHINLAVGYGGR TEIADAMRSIVQQHHLAGGTLEDLAALLTPDLIGEHLYTSGQPDPDLVIRTSGEQRIS DFMLWQSAHSELYFMEALGPDLREVDFLRALRDYSSRQRRFGS" misc_feature complement(2566439..2567113) /gene="uppS" /locus_tag="CMS_2423" /old_locus_tag="CMS2423" /inference="protein motif:HMMPfam:PF01255" /note="HMMPfam hit to PF01255,Di-trans-poly-cis-decaprenylcistransferase, score 1.1e-77" misc_feature complement(2566553..2566606) /gene="uppS" /locus_tag="CMS_2423" /old_locus_tag="CMS2423" /note="PS01066 Undecaprenyl pyrophosphate synthetase family signature." gene 2567303..2568058 /locus_tag="CMS_2424" /old_locus_tag="CMS2424" /db_xref="GeneID:6159088" CDS 2567303..2568058 /locus_tag="CMS_2424" /old_locus_tag="CMS2424" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711082.1" /db_xref="GI:170782748" /db_xref="GeneID:6159088" /translation="MTRDASSPGPLGRPEGETPEDEAHVPHLPLVEDAQDVGPEPKPT WRGWLHAGMTPVALVLGIVLIAAAEGAAAKIACAVFVASSLLLFGVSAVYHRFDWSPR ARILLKRMDHANIFLLIAGSYTPITVLALPHGKSVLLLWLVWSGAALGVLFRVLWIHA PRWLYVLLYLVLGYASLVFIVDFFRADAAMMTLILAGGLAYTVGAVAYALKRPNPWPG RFGFHEIFHAFTLVAFLCHWTGIFLVATHPPVV" misc_feature 2567414..2568016 /locus_tag="CMS_2424" /old_locus_tag="CMS2424" /inference="protein motif:HMMPfam:PF03006" /note="HMMPfam hit to PF03006, Hly-III related proteins,score 2.9e-54" misc_feature order(2567438..2567506,2567525..2567593,2567636..2567695, 2567708..2567776,2567789..2567845,2567864..2567932, 2567975..2568043) /locus_tag="CMS_2424" /old_locus_tag="CMS2424" /note="7 probable transmembrane helices predicted for CMS2424 by TMHMM2.0 at aa 46-68, 75-97, 112-131, 136-158,163-181, 188-210 and 225-247" gene complement(2568082..2569398) /locus_tag="CMS_2425" /old_locus_tag="CMS2425" /db_xref="GeneID:6158018" CDS complement(2568082..2569398) /locus_tag="CMS_2425" /old_locus_tag="CMS2425" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001711083.1" /db_xref="GI:170782749" /db_xref="GeneID:6158018" /translation="MLKLGAVLGGTALLAACSGPSVGGDTAATAAPDTDWDGIQPATD ITWWTTHPGQTSDLEAQFAADFLAKTGITVNVVTGGASYDEIAQKLQAAAGTDSMPDM VNASDTWWFRYMVNKQSIAMDGLMSHLGFELDDFNKVFLDDYLYNGARYAVPYARSTP IFYYDKSIWQKAGLPDRAPDTWAELEEWAPTIMKATGGTPAVRLPQGSIGTWAMSNVL WGRGGQYSDGWDLKLDQPETLEAARYARGLVFDSKIANVAAASGDTAVDFAGGLAPCT IASAGAVGIVTASAKFPIGTGVLPGGPQGRFVPTGGTGLAVIGSKTKEQQLAAAMFIK HVTEVDQQVAFAKKTGYAPVRTSAGQSSDLTGFWASNPAFRTVYDSLEHVRSQDWART LIPNGDTYLQQPWSQILTQDADPAAVFPAAATQLTSAYTENVQPYL" sig_peptide complement(2568082..2568171) /locus_tag="CMS_2425" /old_locus_tag="CMS2425" /note="Signal peptide predicted for CMS2425 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.873 between residues 30 and 31" misc_feature complement(2568370..2569389) /locus_tag="CMS_2425" /old_locus_tag="CMS2425" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 2.2e-19" misc_feature complement(2569348..2569380) /locus_tag="CMS_2425" /old_locus_tag="CMS2425" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2569531..2570361) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /db_xref="GeneID:6158019" CDS complement(2569531..2570361) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711084.1" /db_xref="GI:170782750" /db_xref="GeneID:6158019" /translation="MSGSTRPPLAGTYLALALAVVVMLLPLVWMVLTSFKDFGEIYSL PLKILPSSFAPTNYATASDTVSFSTLATNSLVKTIVGSGLKVLLGLMTAYALVFIRVP FTKVWFGVVILALLVPQQIVMIPNYQVIAGLGWINTYPGLILPGVASAYGTFLFRQHF LTLPGSVLEAAAMDGVGHLRRLWSFVIPMSGPTIAAVALVSIVGEWNDYLWPLLVTTD PRMMTLPVGLTLLQDTTGITNWGVLMAGTVIVTIPVLAVFLVFQRRIVGGLTAGAVTG" sig_peptide complement(2569531..2569638) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /note="Signal peptide predicted for CMS2426 by SignalP 2.0 HMM (Signal peptide probability 0.794) with cleavage site probability 0.414 between residues 36 and 37" misc_feature complement(2569549..2570163) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.3e-09" misc_feature complement(order(2569579..2569647,2569750..2569818, 2569897..2569965,2569993..2570046,2570059..2570127, 2570257..2570325)) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /note="6 probable transmembrane helices predicted for CMS2426 by TMHMM2.0 at aa 13-35, 79-101, 106-123, 133-155,182-204 and 239-261" misc_feature complement(2569798..2569884) /locus_tag="CMS_2426" /old_locus_tag="CMS2426" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(2570442..2571431) /locus_tag="CMS_2427" /old_locus_tag="CMS2427" /db_xref="GeneID:6158020" CDS complement(2570442..2571431) /locus_tag="CMS_2427" /old_locus_tag="CMS2427" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711085.1" /db_xref="GI:170782751" /db_xref="GeneID:6158020" /translation="MTHAPAPTRVEPPPGAASTPALPASTRADAAARPRRRRPGRLRD GLLFLAFVGPNVLLLAVFTYKPLLESFYYSTLQWNIGSSIAREVGLANYVAWFQDPQT PTVIRVTLIFTGVTVVGSMALGLGVAVLLNRRIRLRGPVRTIIVAPYVLSGVAVGFLW LYVFDPNFGLVSAGLQLIGLPSPDWYSDPAAALAMVTTVQVWRDLGYCALIYLAGLQA VPKDLLDAAALDGAGRIRTFLRVVLPLLSPTTFFLSVTTLLSSLQTFDLISAMTKGGP LQGTTTMMYQIFHEGFVAGRAGYSSAVATILFLVLLVVTLVQLVVVQRKVHYS" misc_feature complement(2570451..2571128) /locus_tag="CMS_2427" /old_locus_tag="CMS2427" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.2e-21" misc_feature complement(order(2570466..2570534,2570655..2570723, 2570784..2570852,2570943..2571002,2571039..2571107, 2571240..2571299)) /locus_tag="CMS_2427" /old_locus_tag="CMS2427" /note="6 probable transmembrane helices predicted for CMS2427 by TMHMM2.0 at aa 45-64, 109-131, 144-163,194-216, 237-259 and 300-322" gene complement(2571849..2572199) /locus_tag="CMS_2429" /old_locus_tag="CMS2429" /db_xref="GeneID:6158021" CDS complement(2571849..2572199) /locus_tag="CMS_2429" /old_locus_tag="CMS2429" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711086.1" /db_xref="GI:170782752" /db_xref="GeneID:6158021" /translation="MMGADLVLRLATAVTTTPSPTPTAEFDPDTVSPGPIGFIAIFFV AVVVLLLMVDMTRRIRRTRYREEIRGRLEAEKLEADLARDSAPERDPRTTGTAAGDAE GAADPDDPAVPPRA" misc_feature complement(2572041..2572109) /locus_tag="CMS_2429" /old_locus_tag="CMS2429" /note="1 probable transmembrane helix predicted for CMS2429 by TMHMM2.0 at aa 31-53" gene complement(2572196..2573122) /locus_tag="CMS_2430" /old_locus_tag="CMS2430" /db_xref="GeneID:6158022" CDS complement(2572196..2573122) /locus_tag="CMS_2430" /old_locus_tag="CMS2430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711087.1" /db_xref="GI:170782753" /db_xref="GeneID:6158022" /translation="MYSGCPDYIPHPWSPVTLRLMAVHAHPDDESSKGAATYTHYTKQ GAEIMVVSCTGGEAGDILNEGLAERAMAERDLPGLRRIEMARAQAVMGVQHRWLGYVD SGMAREDGSLPPAAFASIPVEVSAEPLVRLVREFRPHVLVAYDENGGYPHPDHIQAHV IAMEAWRESGVAGSYPDAGEPWEISKLYFDRIFNGAKIRAVREHLVAADAAPEMLEAV DEMLDWMGDRPDLATTHVHVADHFEARDRALLSHASQVAPDSSFFRWPRDLQQRAWPF EDFQLVESRVDAPDEEHDLFAGIVDEDQAAVA" misc_feature complement(2572625..2573062) /locus_tag="CMS_2430" /old_locus_tag="CMS2430" /inference="protein motif:HMMPfam:PF02585" /note="HMMPfam hit to PF02585, LmbE-like protein, score 2.7e-39" gene 2573144..2573626 /locus_tag="CMS_2431" /old_locus_tag="CMS2431" /db_xref="GeneID:6158023" CDS 2573144..2573626 /locus_tag="CMS_2431" /old_locus_tag="CMS2431" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711088.1" /db_xref="GI:170782754" /db_xref="GeneID:6158023" /translation="MTTESRSPAPAAPHADDDETVEHRVPAHRSSPALDERYGRTRPA RIRQRWLYGIVGGLVAVVFGAWVLWAGLDQASGSIDATDRAFDIVDARTIDVTFSVVM PAGTQAFCAVQAQDEQRSIVGWKVVELPAQDGFERMETVRLRTTGPAVTGLIHSCWPA" misc_feature 2573291..2573359 /locus_tag="CMS_2431" /old_locus_tag="CMS2431" /note="1 probable transmembrane helix predicted for CMS2431 by TMHMM2.0 at aa 50-72" gene 2573687..2574175 /locus_tag="CMS_2432" /old_locus_tag="CMS2432" /db_xref="GeneID:6158024" CDS 2573687..2574175 /locus_tag="CMS_2432" /old_locus_tag="CMS2432" /codon_start=1 /transl_table=11 /product="putative transcription elongation factor" /protein_id="YP_001711089.1" /db_xref="GI:170782755" /db_xref="GeneID:6158024" /translation="MAQEQAVTWLTQEAFDRLSRELDTLSVQGREEIAKKIEIAREEG DLKENGGYHAAKEEQGKIEARIRQLTQLLRTAEVGDAPESHGVVEPGTVVTALIAGDE TKFLLGNREIAGDSDLDVYSEQSPLGAAIIGWEVGQKGAYTAPNGREIPVEIQAVENY TP" misc_feature 2573699..2573920 /locus_tag="CMS_2432" /old_locus_tag="CMS2432" /inference="protein motif:HMMPfam:PF03449" /note="HMMPfam hit to PF03449, Prokaryotic transcription elongation factor GreA/GreB, score 4.6e-30" misc_feature 2573933..2574163 /locus_tag="CMS_2432" /old_locus_tag="CMS2432" /inference="protein motif:HMMPfam:PF01272" /note="HMMPfam hit to PF01272, Prokaryotic transcription elongation factor GreA/GreB, score 0.00016" gene complement(2574260..2575636) /locus_tag="CMS_2433" /old_locus_tag="CMS2433" /db_xref="GeneID:6158025" CDS complement(2574260..2575636) /locus_tag="CMS_2433" /old_locus_tag="CMS2433" /note="catalyzes the formation of 2-oxobutanoate from L-threonine" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /protein_id="YP_001711090.1" /db_xref="GI:170782756" /db_xref="GeneID:6158025" /translation="MTDAAPARTPAEEAAAAPHADLPHLRAVGDELDPSQLGEEAAAL AQELPRGSAPTLARIEAAREVVSRVAEVTPMESSRFLAEILGSPVHLKCENLQRTGSY KIRGAYNRISRLTDEEKARGVVAASAGNHAQGVAFAARELGIRATIFMPVGVALPKLQ ATRQYGAEVILRGHTVAEPLLAAAEFAAQTGAVLIPPFDHVDVITGQATLGLEILDQT PAVETVVVPIGGGGLISGVATALKLRAAEEGRTIRVVGVQARNAAAYPPSLAAGRATE IEITPTIADGIAVAKPGLLNFDIIRDSVDEVVTVEDDDTARALLLLLERAKLVVEPAG AVGVAAILAGLVEDAGRTVVILSGGNIDPLMMERVISRGLAASDRYVKLRIMLPDRPG QLARTSQIISEANANVVEVLHTRHGRGLQISEVELEVSVETRGPEHTGEVVQRLRDAG YDPRLQRD" misc_feature complement(2574266..2574496) /locus_tag="CMS_2433" /old_locus_tag="CMS2433" /inference="protein motif:HMMPfam:PF01842" /note="HMMPfam hit to PF01842, Amino acid-binding ACT,score 1.6e-06" misc_feature complement(2574560..2575441) /locus_tag="CMS_2433" /old_locus_tag="CMS2433" /inference="protein motif:HMMPfam:PF00291" /note="HMMPfam hit to PF00291,Pyridoxal-5'-phosphate-dependent enzyme, beta subunit,score 9.8e-77" misc_feature complement(2575316..2575357) /locus_tag="CMS_2433" /old_locus_tag="CMS2433" /note="PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site." gene complement(2575633..2576868) /locus_tag="CMS_2434" /old_locus_tag="CMS2434" /db_xref="GeneID:6158026" CDS complement(2575633..2576868) /locus_tag="CMS_2434" /old_locus_tag="CMS2434" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711091.1" /db_xref="GI:170782757" /db_xref="GeneID:6158026" /translation="MIFGLRSRARAAADARAGERRADPDIDAPQPISRTVAESVPPGM VIAGAWAWRLLLILGVLGVVAWLVIQLEYVVIPLFLAVVLAALLVPISNWMQRHHVPK WLAVAISEIGVIVAVAALVYLVTTQIIGQYDSIRAQTLTRYADLRGFLTDGPLQLSEQ QLNDAYAQAVDAVQRDAGALLSGALSVTSSLGHVLTGVLLVLFSTLFILIDGAGMWRW VVRLFPRLARPAVDGAGKAGWTTLQNFVKVQVLVALIDAVGIAGGAAIIGVPLAIPIG VLVFLGSFIPIVGAVVTGTLAVFVALVYNGLTQALIMVGIVLLVQQIEGHVLQPLIMG SVVKVHPLAVVLSVAAGGMVAGIAGTFFAVPLVATLNSMVKHVASGAWRGQPEPPPPA VPADASHATRRPRPRKRTS" misc_feature complement(2575735..2576718) /locus_tag="CMS_2434" /old_locus_tag="CMS2434" /inference="protein motif:HMMPfam:PF01594" /note="HMMPfam hit to PF01594, Protein of unknown function UPF0118, score 7e-53" misc_feature complement(order(2575759..2575827,2575870..2575938, 2575957..2576025,2576053..2576121,2576209..2576277, 2576479..2576547,2576584..2576652,2576662..2576721)) /locus_tag="CMS_2434" /old_locus_tag="CMS2434" /note="8 probable transmembrane helices predicted for CMS2434 by TMHMM2.0 at aa 7-26, 30-52, 65-87, 155-177,207-229, 239-261, 268-290 and 305-327" gene 2576991..2578205 /locus_tag="CMS_2435" /old_locus_tag="CMS2435" /db_xref="GeneID:6158027" CDS 2576991..2578205 /locus_tag="CMS_2435" /old_locus_tag="CMS2435" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711092.1" /db_xref="GI:170782758" /db_xref="GeneID:6158027" /translation="MALAAQGLGRPQPGAAGTRRLAAEIRRLGLLQIDSVNVFERSHH LPVLARVGPYDRAALDRMLFGGGGAYTEYWAHQAAVLPVDDLPLFGWRMEAERARRAA PGSWAHDHAPLLAEVRAELARTGPVPASAIEHESNVRTGPWWGWSDVKRALEAMFAWG EIASAGRRGFERVYGLAEDVLPAAVLGRDVPEEDAVRELVRRAAVAHGIGTAADLGDY HRLSRAATDRALRDLADAGEVLPVTVPGWEGRGKPLPVWLHRDARLPRRIRGEALLSP FDPVVWFRERALRLFDLHYRIEIYTPAAQRVHGYYVLPVLVDDEIVARVDLKSDRQAG VLRVQASWIEGRHDPGAVAERIAPLLERAAAWQGLEGVGVVDRGTLAEALRAHLPAVA AAPVADRAGERP" misc_feature 2576991..2578136 /locus_tag="CMS_2435" /old_locus_tag="CMS2435" /inference="protein motif:HMMPfam:PF06224" /note="HMMPfam hit to PF06224, Protein of unknown function DUF1006, score 9.2e-131" gene 2578202..2578657 /locus_tag="CMS_2436" /old_locus_tag="CMS2436" /db_xref="GeneID:6158028" CDS 2578202..2578657 /locus_tag="CMS_2436" /old_locus_tag="CMS2436" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711093.1" /db_xref="GI:170782759" /db_xref="GeneID:6158028" /translation="MTAFPTTHELGRIDVVTLEDAPALSRDAPLDLDAVQAAWPAFEA DFDSLRGRRMMGLVYGGDRVYRMASVRLERDDPAPADMDETIVPGGAYLRLRLRGSAP AVYGEIEPAFEVLFGLADHDPGRPHIEHYRRAGEIDCLVPIRSADQRPG" gene complement(2578668..2579234) /locus_tag="CMS_2437" /old_locus_tag="CMS2437" /db_xref="GeneID:6158029" CDS complement(2578668..2579234) /locus_tag="CMS_2437" /old_locus_tag="CMS2437" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711094.1" /db_xref="GI:170782760" /db_xref="GeneID:6158029" /translation="MELWIALGVVVLLAVLVGIYLWATYNALVTLNVRVDEAWSDITV QLKRRADLLPTIIESVKGYATHEQKVFEKVASARTETISASSPSEASAAEENLQGAMK SLFAVAEAYPQLQTSQTFLQLQGELVDTEDRIQASRRFYNGGVRELNTKITQFPNTLF VRGLGFGERDFYEVSSLASIAEPPRVQF" misc_feature complement(2578671..2579234) /locus_tag="CMS_2437" /old_locus_tag="CMS2437" /inference="protein motif:HMMPfam:PF04011" /note="HMMPfam hit to PF04011, LemA, score 3.7e-59" misc_feature complement(2579157..2579225) /locus_tag="CMS_2437" /old_locus_tag="CMS2437" /note="1 probable transmembrane helix predicted for CMS2437 by TMHMM2.0 at aa 4-26" gene complement(2579342..2580712) /locus_tag="CMS_2438" /old_locus_tag="CMS2438" /db_xref="GeneID:6158030" CDS complement(2579342..2580712) /locus_tag="CMS_2438" /old_locus_tag="CMS2438" /codon_start=1 /transl_table=11 /product="putative glycoside hydrolase" /protein_id="YP_001711095.1" /db_xref="GI:170782761" /db_xref="GeneID:6158030" /translation="MTPRDAAPDRPTPTELAGLLAGGPRVGVSTSATKVEGRAHEGGR TESVWDAFARRPGAVADGSDPERGARHMERYREDVALAVELGVDVLSFSLSWSRIQPE ARGGLRREGIAFYDELVDALLAAGIRPRVALHDHDLPVELQDRGGWLHRDTALRFGDL AYLAAETLGDRVPDWVTLRTPALTTMAGHVTGTHAPGSRLGLDALPTVHHQLLAHGRA IEAIRGSSSSARVGIVNAHRVVEAASADDDDRAAALVARALHQDLFADAVLLGRYPDL AGPHAEAFERLGRVDPADLRSIGQPVDHYGVALADPIRVAAVPRLTAGSTAIPFGELP WTDHPASLDGHPVAPDLVPVVLSGLDAAHPEQVDDRDGSRRDPRRAHAISDHLVQALA AVAPGGAAEGVRLEAVVAGSLLDGFEWEAGHEAPRGLVHVDPRTGDRTPRSSYRFLRD TLRERG" misc_feature complement(2579345..2580667) /locus_tag="CMS_2438" /old_locus_tag="CMS2438" /inference="protein motif:HMMPfam:PF00232" /note="HMMPfam hit to PF00232, Glycoside hydrolase, family 1, score 5e-44" gene 2580853..2583144 /locus_tag="CMS_2439" /old_locus_tag="CMS2439" /db_xref="GeneID:6158031" CDS 2580853..2583144 /locus_tag="CMS_2439" /old_locus_tag="CMS2439" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711096.1" /db_xref="GI:170782762" /db_xref="GeneID:6158031" /translation="MQQSVRNEDRPSTGGGAGDVRRSRQRLVRAASVLLLLAALTAGG AVAASAATDTPTPTPSPAPSGDVEPAPTVVTPPFSTDGSVAVTGTRPAGVDVQVTIAS VPAAVTLPSSTTWRATATGVPDGQSPVRVTAGQQEATATASVLRAPGVNSFSVVTTGL VSGTGYPGATVDARSGSAACRATVGSSSTWACLLAPPPPSGTGVPVTATQTTPWSTGT PAVGRGTGSFDTTAPGAAVITAPAARATVDAAGITISGTSDEDGDTVRAYISGYGDAA CQAQVAGGRWSCATGTLPPGPLGITATVTDPLGNISTLAAEVRVTVQAPASPTPGATT PPASPTPEATSSPQGTQAAPAPGSDPGAGGGGAAGTAPGTDGAPGPGSAPAAAAPGTW NAPTRFGTSLQPLPAAFTDGRGLLPLLLALGAVLLVTLPALLLRGALVARFGGRHRAA EDVTPLRIIARGDAAALTTRSAAAAFSDSTATTGQMRIVHGRLDSAPIPVPARREPEP TLLGARPAREPGRAGRWGAAAAALALAAALAALSLPVGSDPNAVRLFLAALVGLAVVN GVGVVAVASVAGRVGAGPARVRAVPALLVLSATAVLVSRAVGLAPPIVIGQILGLVAD DRDDRSRARLALVQSGSLAALGLVAWILYGFVPADGTMWPQLANELLSVVTLASLSSA ALALAPVSLVLGRSLLLRSLPLWAVVSVAVLTLAFAAVATTASGVPTEVWITALVVAG AFAAVSVAVWLWIRVVEPSLQRL" sig_peptide 2580853..2581002 /locus_tag="CMS_2439" /old_locus_tag="CMS2439" /note="Signal peptide predicted for CMS2439 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.947 between residues 50 and 51" misc_feature order(2580940..2581008,2582104..2582172,2582419..2582487, 2582515..2582583,2582752..2582820,2582863..2582931, 2582965..2583033,2583043..2583111) /locus_tag="CMS_2439" /old_locus_tag="CMS2439" /note="8 probable transmembrane helices predicted for CMS2439 by TMHMM2.0 at aa 30-52, 418-440, 523-545,555-577, 634-656, 671-693, 705-727 and 731-753" gene 2583277..2584719 /locus_tag="CMS_2440" /old_locus_tag="CMS2440" /db_xref="GeneID:6158032" CDS 2583277..2584719 /locus_tag="CMS_2440" /old_locus_tag="CMS2440" /codon_start=1 /transl_table=11 /product="putative amino acid transport protein" /protein_id="YP_001711097.1" /db_xref="GI:170782763" /db_xref="GeneID:6158032" /translation="MSTSSTSLWAALTRRKPVETIEAEPGAATEEGGLTRSLGLWQLT AIGVGGIIGTGIFTLAGTVANQTAGPAVLISFLIAGIASAAAALSYAEFAGMIPKAGS AYTYGYAALGEIVGWFIGWDLLLEYTAIVGVVAIGVSGYAGFLLDQFGVDLPAWMLGA AGTGDGHVVDLFAVILCLGTAFVLTRGMKSVGRFELYLVGLKVTLVLVIVVIGFTQIT GANYQPYFPFGAAGVFTGAATVFFAVFGYDAMSAAAEESKDATKHMPKAILLSLAIAM VLYVLATIVLTGMQKYSDINPESGFATAFESVGLPAVANVVAVGAIVSVVTVMLTFML GASRVWFSMSRDGLLPKWFAVTDRKRNVPTRVTWIIGIGSALFAGFLPITVVAELTNI GILLAFVVVCAAVIVLRYKRPEIPRAFRLPLMPVVPIIGIGFSLWLVSSLPWETWVRF AVWLVIGLVIYLTYSRRNSVLSPDSPRNRR" misc_feature order(2583391..2583459,2583478..2583546,2583574..2583633, 2583646..2583714,2583772..2583831,2583868..2583936, 2583949..2584017,2584075..2584143,2584213..2584281, 2584372..2584431,2584441..2584500,2584537..2584605, 2584615..2584668) /locus_tag="CMS_2440" /old_locus_tag="CMS2440" /note="13 probable transmembrane helices predicted for CMS2440 by TMHMM2.0 at aa 39-61, 68-90, 100-119, 124-146,166-185, 198-220, 225-247, 267-289, 313-335, 366-385,389-408, 421-443 and 447-464" misc_feature 2583400..2584695 /locus_tag="CMS_2440" /old_locus_tag="CMS2440" /inference="protein motif:HMMPfam:PF00324" /note="HMMPfam hit to PF00324, Amino acid permease-associated region, score 1.2e-36" misc_feature 2584069..2584116 /locus_tag="CMS_2440" /old_locus_tag="CMS2440" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(2584812..2585753) /locus_tag="CMS_2441" /old_locus_tag="CMS2441" /db_xref="GeneID:6158033" CDS complement(2584812..2585753) /locus_tag="CMS_2441" /old_locus_tag="CMS2441" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711098.1" /db_xref="GI:170782764" /db_xref="GeneID:6158033" /translation="MFDKKFITQAIHKSAQSPLDRRRFFSAAGIAGLGVGAAALIPAT GAQAADAQAEADAGQATDLAVLNFALNLEYLEAEFYLRASTGNGLVPNDISGVGTPGG VTGGRQVQFKDRAIREYAREIAQDEKAHVKFLRSALGSAKVARPAIDLDAAFSAAAQA AGLIKAGEKFDAFASDENFLLASFVFEDVGVTAYKGAAPLITNKTYLEAAAGILAVEA YHAGIIRTSLFAKGLAAPTNAISNARDSLDGSTDLDQGITISGGANLVPTDANGIAFS RTTGQVLNIVYLNNKAVTKGGFYPNGVNGGINTSGAN" sig_peptide complement(2584812..2584955) /locus_tag="CMS_2441" /old_locus_tag="CMS2441" /note="Signal peptide predicted for CMS2441 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.792 between residues 48 and 49" misc_feature complement(2585616..2585684) /locus_tag="CMS_2441" /old_locus_tag="CMS2441" /note="1 probable transmembrane helix predicted for CMS2441 by TMHMM2.0 at aa 24-46" gene complement(2585939..2588572) /locus_tag="CMS_2442" /old_locus_tag="CMS2442" /db_xref="GeneID:6158034" CDS complement(2585939..2588572) /locus_tag="CMS_2442" /old_locus_tag="CMS2442" /note="Multi-domain protein with no full length matches" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711099.1" /db_xref="GI:170782765" /db_xref="GeneID:6158034" /translation="MRSRGMRARGGGRTRRRIGGWAAAAVALALAVVPATAALAVPSS PKAAAPQAAAPAAPADEVDLTRAPAVPWFGGIIDWTADDAQSYADRLGATPAVLGQSV RYPLGSDDVTYLDQFAQQAAQQGSLLLLTLEPTKPLGELTAADATALTGRLEALRERY DSRALVRFAPEMNGSWTPWGQQPTAYVTAFRQVADAVHASDAGAVTVWSPAYAVGYPF GSADGLTDASGTRSIAELDTDGNGRVDVDDDAYRPYYPGDDAVDWIGLSASHFGTEQD FTVGEPTEDYLGGEVIPQQEFGENVVPEDGKFARELTGQYGYADQGGAGRDFAAEWIE GTGKPTVIETGALYDPARTDGASELDIKSAWWDQVLSADIRAAHPGIGMVVWRELERK EAEADDAVIDWRATGEPAIASALRAHLDPATATLGPVTQVFDQERANVATAQYRDPGS PEDEQMGWIVLCAVVLLALFVISGPIGHLKPGWRYPDENSPRDRRLDLFRGWTIVAVV ITHIEVASPYSYVTINAIGAITGAEMFVLLSGLVLGMVYPMAVKKFGEMKALVSILRR AFKQYIVAIAVVVIVFALSFVPFLDTDVITTFTDRGTGADGKVTTGQVYDLYPNGARL LDYPPPWYAIRDLLLLRMGPWVFNIMGLFVVLTLLVPAVVWLLRRRMWWVVLIVSWTA YVLNAMYDIRVLPSMFEDVFPLLTWQVAFLNGMVIGYYRRQITRALTGRLGRVLVTIL LVAYVGSLAVLWAGHTYGVQLPGVSEGLYSSLYESMYQRTFLQPGRLLDLGLMLVVAY TFLTRVWKPVDRAFGWFYTPLGSASLYVFIVHVFFVLLVGSLPFIDRSNPWQGVAVHT LVLAAIWFMVTRKVLFKVIPT" sig_peptide complement(2585939..2586115) /locus_tag="CMS_2442" /old_locus_tag="CMS2442" /note="Signal peptide predicted for CMS2442 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.664 between residues 59 and 60" misc_feature complement(2585951..2587096) /locus_tag="CMS_2442" /old_locus_tag="CMS2442" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 0.00063" misc_feature complement(order(2585975..2586028,2586071..2586139, 2586158..2586217,2586311..2586379,2586413..2586472, 2586500..2586559,2586572..2586640,2586803..2586871, 2586932..2587000,2587028..2587081,2587142..2587210, 2588447..2588515)) /locus_tag="CMS_2442" /old_locus_tag="CMS2442" /note="12 probable transmembrane helices predicted for CMS2442 by TMHMM2.0 at aa 20-42, 455-477, 498-515,525-547, 568-590, 645-667, 672-691, 701-720, 732-754,786-805, 812-834 and 849-866" gene complement(2588572..2589006) /locus_tag="CMS_2443" /old_locus_tag="CMS2443" /db_xref="GeneID:6158035" CDS complement(2588572..2589006) /locus_tag="CMS_2443" /old_locus_tag="CMS2443" /codon_start=1 /transl_table=11 /product="putative anti-sigma factor" /protein_id="YP_001711100.1" /db_xref="GI:170782766" /db_xref="GeneID:6158035" /translation="MTHHAPPVRANVTLPAVDESLAAVHAVIAAVWDQACDVGDDERM LFETAVVEIAGNVVEHGVAVGERAGYPVTFTMTVICQHDRIVALFEDDGQPAVVDLTR VSMPDDLSESGRGLALAQAVLDDLTYERTDGSNRWRLVRLRG" gene complement(2589011..2589349) /locus_tag="CMS_2444" /old_locus_tag="CMS2444" /db_xref="GeneID:6158036" CDS complement(2589011..2589349) /locus_tag="CMS_2444" /old_locus_tag="CMS2444" /codon_start=1 /transl_table=11 /product="putative anti-sigma factor antagonist" /protein_id="YP_001711101.1" /db_xref="GI:170782767" /db_xref="GeneID:6158036" /translation="MIDIAVNEQGTHVSVVTPTGRLNMVSARQLTTIVTEVIDGGRPF VVVDLGSTDFMDSSGLGALVSGLKRARQAGGDLRLARPNAQVKAVLELTNLNRVLTVH ESPEGVFRDR" misc_feature complement(2589026..2589343) /locus_tag="CMS_2444" /old_locus_tag="CMS2444" /inference="protein motif:HMMPfam:PF01740" /note="HMMPfam hit to PF01740, Sulfate transporter/antisigma-factor antagonist STAS, score 2.3e-15" gene complement(2589346..2591337) /locus_tag="CMS_2445" /old_locus_tag="CMS2445" /db_xref="GeneID:6158037" CDS complement(2589346..2591337) /locus_tag="CMS_2445" /old_locus_tag="CMS2445" /codon_start=1 /transl_table=11 /product="putative polysaccharide synthase" /protein_id="YP_001711102.1" /db_xref="GI:170782768" /db_xref="GeneID:6158037" /translation="MSRNAHRAPTTGRSPLRFAFIRLLAVVTAILGLNYIIWRLLFSV NTEALWIAIPLVLAETYSLIDSLLFGLTMWRARDRPKPPAPQPGLTVDVFIATYNEPL DLVMETARAAQRITYPHKTWVLDDGNRTELRDLAEAERIGWITRSADWSGRARHAKAG NLNNALLTTEGEFMLILDADQVPVPEILDKTLGYFDDRRMAIVQTPQVFVNVPDSDPL GSQAPLFYGPIQQGKDGWNAAFFCGSNAILRREALMLLGVSRYVTDIEITVFRALRTA GDVIDKAREELEPDQLELRKALDDVAYDVRRARAGLRRGQRLADVTYRFQKRVDSIAA RMVQDDMAALNADLAEIAALAGRHSAARDAVSLVDDTAMARLSERNWSPLGALDAVRA IVRDIDVHRDDDAQSIMPLATISVTEDMATCMRLHGLGWKSAYHDEVLAYGLAPEDLP TMLTQRLRWAQGTIQVFFRENPLLQKALSIPQRLMYFATMWSYFSGFTAVVYVAAPII YLTFGVLPVQAISTDFFIRLIPFLLVNQLLFAVVGRGKRTWRGQQYSLALFPVWISSV TTAVANVFFRKPLDFAVTPKVRAASGKPRWDLVKPQLYVMGALIVASAIGLLRLGVGQ ATPLGTFTNLAWVVFDLAIFSIIIRAARYRGFTPAKEDA" misc_feature complement(order(2589385..2589453,2589472..2589531, 2589613..2589672,2589709..2589768,2589796..2589864, 2591125..2591193,2591212..2591280)) /locus_tag="CMS_2445" /old_locus_tag="CMS2445" /note="7 probable transmembrane helices predicted for CMS2445 by TMHMM2.0 at aa 20-42, 49-71, 492-514, 524-543,556-575, 603-622 and 629-651" misc_feature complement(2590567..2591064) /locus_tag="CMS_2445" /old_locus_tag="CMS2445" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 3.4e-09" gene complement(2591334..2592569) /locus_tag="CMS_2446" /old_locus_tag="CMS2446" /db_xref="GeneID:6158038" CDS complement(2591334..2592569) /locus_tag="CMS_2446" /old_locus_tag="CMS2446" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711103.1" /db_xref="GI:170782769" /db_xref="GeneID:6158038" /translation="MPWTGVHVGEGAGMSLIEDARSSAMQRAVEALGLLDGPPQERFD RVTSLARTAFSVPLSTIGLADHDRMWFASCAGAELSETPISSVFCDTTVREERVLVVE DAQAHPFYRHLPSVAEEPHIRFYAGHPLRDPEGLVIGTFCLYDVEPRSLDGGQLALFA ELAQWAQRELVANAEMERAQAVQAALLPAAEVEIPGYDIAAVCVPAQVVGGDFYDYER TASGLRFSLADVMGKGTGAAILTATVRAVLRGIASTADRYGAGVLEDTGLMVTDAART LDADLDRTGSFVTLQHGHLDQASGLLRYADAGHGLTIVVHDDGRVTHLDTSDLPVGID VDHRWEERHVVLAHGDTFVTFSDGLFDMFGGSAPAFASIGRLVSDAGGVHALVERVRI LASAGTPLDDVTVLAVRRG" misc_feature complement(2591337..2591915) /locus_tag="CMS_2446" /old_locus_tag="CMS2446" /inference="protein motif:HMMPfam:PF07228" /note="HMMPfam hit to PF07228, Stage II sporulation E,score 1.9e-25" misc_feature complement(2592060..2592458) /locus_tag="CMS_2446" /old_locus_tag="CMS2446" /inference="protein motif:HMMPfam:PF01590" /note="HMMPfam hit to PF01590, GAF, score 2.6e-18" gene 2592776..2593861 /locus_tag="CMS_2447" /old_locus_tag="CMS2447" /db_xref="GeneID:6158039" CDS 2592776..2593861 /locus_tag="CMS_2447" /old_locus_tag="CMS2447" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001711104.1" /db_xref="GI:170782770" /db_xref="GeneID:6158039" /translation="MAFHAFLYTGLSGQAWQDLPLLGWITGYGYLGVPVFIVLSGYVL MLPVAGRPGLDLRHGTATFLRRRARRILPPYFAAIALSLLMALAIPVMRDGAGTAWQS AAPATPAGIASHVLLLQDLSPSWVSQVNAPLWSVAVEWQIYFLMPLVLLPLWRRWGGL PVVAVTTVVMTGASLAGFAPWACPWLLGLFAAGMLAAEITVGARPRWASDRLLLGVAV GAAAVLLVGITVLQGSVWAAELVAGAGFASLLAWAGARTMAGSRPRALGAFVTRPAQR LGLVSYSVYLVHSPFLALGNLLLLPLGLPTGAHAALMLLVVAPLAVAAGFGFFHLVER HFLNTRQVHVTASADPGAASVAPKPAA" misc_feature 2592776..2593792 /locus_tag="CMS_2447" /old_locus_tag="CMS2447" /inference="protein motif:HMMPfam:PF01757" /note="HMMPfam hit to PF01757, Acyltransferase 3, score 2.3e-06" misc_feature order(2592857..2592925,2592986..2593054,2593166..2593234, 2593253..2593321,2593331..2593390,2593409..2593468, 2593478..2593546,2593607..2593675,2593703..2593771) /locus_tag="CMS_2447" /old_locus_tag="CMS2447" /note="9 probable transmembrane helices predicted for CMS2447 by TMHMM2.0 at aa 28-50, 71-93, 131-153, 160-182,186-205, 212-231, 235-257, 278-300 and 310-332" misc_feature 2593904..2596308 /note="submitted with no further information" gene complement(2594277..2594588) /locus_tag="CMS_2448" /old_locus_tag="CMS2448" /db_xref="GeneID:6158040" CDS complement(2594277..2594588) /locus_tag="CMS_2448" /old_locus_tag="CMS2448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711105.1" /db_xref="GI:170782771" /db_xref="GeneID:6158040" /translation="MSMRIQIRVYPGNIDRTKAEYLYNVGPKDTPPKVGDRVRFDMSS TAEPEGEVEAVSWSVGFDFLVVDVVTMINERVRQLADDLEWVDIRNGIPDDEEPDFFV G" gene 2594787..2595050 /locus_tag="CMS_2449" /old_locus_tag="CMS2449" /db_xref="GeneID:6158041" CDS 2594787..2595050 /locus_tag="CMS_2449" /old_locus_tag="CMS2449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711106.1" /db_xref="GI:170782772" /db_xref="GeneID:6158041" /translation="MPAFASMTVFQRPDVSFLKPAADLRNLRKTRLTVASSPSLAVYM VRVVFMVLLLGNEDALTSTIGRTTNQFGGVHLGVSLRVQLPWL" gene complement(2595032..2595457) /locus_tag="CMS_2450" /old_locus_tag="CMS2450" /db_xref="GeneID:6158042" CDS complement(2595032..2595457) /locus_tag="CMS_2450" /old_locus_tag="CMS2450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711107.1" /db_xref="GI:170782773" /db_xref="GeneID:6158042" /translation="MNDRRRNRSRPQASATELPYDEPKNTDGSHPVFCLKHLHRDFDL KESAMTKEAKAAFAESLQSLSGLTWKDLRRAPKHGLGFEKLPTTKLRMTMPDAFSESS EVFVFRYSGKLPMAGVRAGATFHILAIERQYGDLYNHGS" gene complement(2595454..2595939) /locus_tag="CMS_2451" /old_locus_tag="CMS2451" /db_xref="GeneID:6158043" CDS complement(2595454..2595939) /locus_tag="CMS_2451" /old_locus_tag="CMS2451" /codon_start=1 /transl_table=11 /product="putative prophage protein" /protein_id="YP_001711108.1" /db_xref="GI:170782774" /db_xref="GeneID:6158043" /translation="MTFPSAPEPIAAYDASTIARWFLAWADSEEEGALSNLKLQKLLY YAQGHHLARFGAPLFADEIQAWTHGPVVPVVYRQYKDHGSNAIPFTEDFDFFQVDTET TDLLASVWETFGSKSAWKLREMTHSEAPWTSSYRDGEHFITIPRSVIYRYFRGLSALA E" gene complement(2596309..2596383) /locus_tag="CMS_r047" /old_locus_tag="CMSr047" /db_xref="GeneID:6158044" tRNA complement(2596309..2596383) /locus_tag="CMS_r047" /old_locus_tag="CMSr047" /product="tRNA-Leu" /db_xref="GeneID:6158044" gene complement(2596498..2597985) /locus_tag="CMS_2452" /old_locus_tag="CMS2452" /db_xref="GeneID:6159049" CDS complement(2596498..2597985) /locus_tag="CMS_2452" /old_locus_tag="CMS2452" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_001711109.1" /db_xref="GI:170782775" /db_xref="GeneID:6159049" /translation="MPKILIVGGGYAGFYTAWKLESHLRSGEAEVTMVDPLPYMTYQP FLPEVVSGSIEPRHAVVSQRRHLRTTNVVTAKVTGIDHASKTATITPPVGEPYEFTYD IIVVTAGSVSRTFPIPGVADEAIGLKTIEEAVAIRDRIFANFDRAATLPAGPERERLL TFVVVGGGFAGIEVFAEMRSIATDLVKKYPEIDFEDTHFHLIEAMGRIMPEVSLETSH WVLKNLAERGANVHLDTQLKSAVGGVVELSTGESFESDVIVWTAGVMASPMLKNTDLP IEERGRLRVRADGRVEGDDGIVADAWGAGDVAATPDLTGGGVGGFCVPNAQHAVRQGK LMAKNLTASLRGEGVTDYFHKNLGAVAGLGLYQGAFQSGKIGITGFPAWVMHRGYHGL AIPSFERKARVVTGWVNNLVWGRDIVSLEARETPRTAFETFASRPRPAADAAPAAPAK KEAAPAKKAADDTADAPTEGEKSPALAGSYSSSPSVENADEKPSA" misc_feature complement(2597038..2597868) /locus_tag="CMS_2452" /old_locus_tag="CMS2452" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.4e-07" gene complement(2598023..2599258) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /db_xref="GeneID:6158045" CDS complement(2598023..2599258) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /codon_start=1 /transl_table=11 /product="putative sortase-sorted serine protease" /protein_id="YP_001711110.1" /db_xref="GI:170782776" /db_xref="GeneID:6158045" /translation="MARAAAVGILALVAVLPTATPAHADPVREREYWLADYGIEQAWQ TTRGEGVKVAVIDTGVDASVADLRGAVVGGTDVSGVGSTDGTKPVGASSEHGTMVASL LAGRGTGTGSGVIGVAPAASVLSVSVALGGPTPGARDEDAQIADAVRWAVDNGAQVIN MSLTRNSLDWPESWDRAFLYAYQHDVVVVAAAGNRGSGTTEVGAPATIPGVLAVAGVD RAGAASFDASSQGITIAVAAPSEQLVGVEPGGRYVQWSGTSGAAPLVSGVVALVRAAH PELKADDVVERVLATAEQKGQPEIYGRGLVDAAAAVTADVAPASGKPLGDLEEWVRLY RRAPAATPDPAASATPDAAPATPADAPTADPAADALPTAGELRQVGIPALVLSVFAAL AAAMAVVATRHFRRLLRKG" sig_peptide complement(2598023..2598094) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /note="Signal peptide predicted for CMS2453 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 between residues 24 and 25" misc_feature complement(2598056..2598124) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /note="1 probable transmembrane helix predicted for CMS2453 by TMHMM2.0 at aa 379-401" misc_feature complement(2598347..2599165) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /inference="protein motif:HMMPfam:PF00082" /note="HMMPfam hit to PF00082, Peptidase S8 and S53,subtilisin, kexin, sedolisin, score 2.3e-37" misc_feature complement(2598458..2598490) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /note="PS00138 Serine proteases, subtilase family, serine active site." misc_feature complement(2598944..2598976) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /note="PS00137 Serine proteases, subtilase family,histidine active site." misc_feature complement(2599064..2599099) /locus_tag="CMS_2453" /old_locus_tag="CMS2453" /note="PS00141 Eukaryotic and viral aspartyl proteases active site." gene complement(2599333..2599848) /locus_tag="CMS_2454" /old_locus_tag="CMS2454" /db_xref="GeneID:6158046" CDS complement(2599333..2599848) /locus_tag="CMS_2454" /old_locus_tag="CMS2454" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711111.1" /db_xref="GI:170782777" /db_xref="GeneID:6158046" /translation="MTRPPFDPPSERDVRVVTAQLGRPARDVVGIAARCVCGNPTVVS TAPRLTDGTPFPTLYYLCHPAATTAISHLEAEHVMAELQDDLAEDEALRDAYAAAHAS YLADRESILVVPELAGVSAGGMPVRVKCLHALAGHALAAGPGVNPIGDIALARASWSP DVCECADPDAA" misc_feature complement(2599381..2599764) /locus_tag="CMS_2454" /old_locus_tag="CMS2454" /inference="protein motif:HMMPfam:PF04417" /note="HMMPfam hit to PF04417, Protein of unknown function DUF501, score 1.9e-46" misc_feature complement(2599504..2599848) /locus_tag="CMS_2454" /old_locus_tag="CMS2454" /note="PS00430 TonB-dependent receptor proteins signature 1." gene complement(2599845..2600402) /locus_tag="CMS_2455" /old_locus_tag="CMS2455" /db_xref="GeneID:6158047" CDS complement(2599845..2600402) /locus_tag="CMS_2455" /old_locus_tag="CMS2455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711112.1" /db_xref="GI:170782778" /db_xref="GeneID:6158047" /translation="MARFPGLDTLRARRAPRPRTERVPVALPDGDAPAGNWLRSMRFS GFSVMVLVLLVLTVVVLAPGLRIYLEQRQQLSSLQSAVDAQKGTIAQLQDQRARYDDP AFLKAQVRDRLFYVMPGETSYLVRGLPAASGEATTTPDGAPISADLQETKQDWVQALL GSALTSALSDTPPDQLQGSVQGGDQ" misc_feature complement(2600208..2600276) /locus_tag="CMS_2455" /old_locus_tag="CMS2455" /note="1 probable transmembrane helix predicted for CMS2455 by TMHMM2.0 at aa 43-65" gene complement(2600492..2601772) /gene="eno" /locus_tag="CMS_2456" /old_locus_tag="CMS2456" /db_xref="GeneID:6158048" CDS complement(2600492..2601772) /gene="eno" /locus_tag="CMS_2456" /old_locus_tag="CMS2456" /EC_number="4.2.1.11" /note="enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis" /codon_start=1 /transl_table=11 /product="phosphopyruvate hydratase" /protein_id="YP_001711113.1" /db_xref="GI:170782779" /db_xref="GeneID:6158048" /translation="MAAIEAVNAREILDSRGNPTVEVEVLLEDGTFTRAAVPSGASTG AFEAYELRDGDAGRYLGKGVQKAVAAVVDEIGPAIQDLDAADQRIIDATMIELDGTEN KSRLGANALLGVSLAVAKAAADSAELPLYRYLGGPNAHTLPVPMLNVINGGSHADTNV DIQEFMLLPVGASTFSEGLRWGVETYHALKSLLKKKGLSTGLGDEGGFAPNLDSNRAA LDLLMEAIDAAGFTAGKQIALGLDVASSEFYSDGAYTFEGQKVDAAHLTAYFADLVAS YPLITIEDPLDEDDWAGYDHFTAELGSKVQIVGDDLFVTNPKRLADGITRGVANSILV KVNQIGTLTETLDAVSLAQRSGYTTVLSHRSGETEDTTIADLAVAVEAGQIKTGAPAR SERVAKYNQLLRIEQDLGAAAVYAGRSAFPRFQA" misc_feature complement(2600501..2601358) /gene="eno" /locus_tag="CMS_2456" /old_locus_tag="CMS2456" /inference="protein motif:HMMPfam:PF00113" /note="HMMPfam hit to PF00113, Enolase, score 2.3e-168" misc_feature complement(2600738..2600779) /gene="eno" /locus_tag="CMS_2456" /old_locus_tag="CMS2456" /note="PS00164 Enolase signature." misc_feature complement(2601371..2601766) /gene="eno" /locus_tag="CMS_2456" /old_locus_tag="CMS2456" /inference="protein motif:HMMPfam:PF03952" /note="HMMPfam hit to PF03952, Enolase, score 9.7e-65" gene complement(2601889..2603196) /gene="hisS" /locus_tag="CMS_2457" /old_locus_tag="CMS2457" /db_xref="GeneID:6158676" CDS complement(2601889..2603196) /gene="hisS" /locus_tag="CMS_2457" /old_locus_tag="CMS2457" /EC_number="6.1.1.21" /note="catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase" /protein_id="YP_001711114.1" /db_xref="GI:170782780" /db_xref="GeneID:6158676" /translation="MPQQITPPRGMRDFLPAEKARREQALAIIRRTYRAHGFDEIETP VVEESGRLHAGLGGDNEKLAYSVLKRGLSGDDLHAAADAGDVLALSDLGLRFDLTVPL ARFYASHRAELPGVFRSIQAAPVWRAERPQKGRYRQFMQCDIDIIGEAGQLAEVELIS ATAATLAALGLTGCTIRVNDRRILAGILDSCGFAAERQAQALISIDKLDKIGATGVVA ELAEGGADAAAVLGGILERIEPALADGGVPLTTEAITAILPAGVDPDAVADLETLADA LVGLPDGVTLRFDPTLVRGMGYYTGTIFEIAHPASGSSVGGGGRYDGMIGRFLGQDVP AAGFSIGFERIVDLAVLPVAADDDAIALVHDRRTPVRVLARLKAELVASGRRVRLEPR PKNVAPLLEALKQQGFRTFAAVDGDTGDAASLQERPLDGGPRG" misc_feature complement(2602678..2603166) /gene="hisS" /locus_tag="CMS_2457" /old_locus_tag="CMS2457" /inference="protein motif:HMMPfam:PF00587" /note="HMMPfam hit to PF00587, tRNA synthetases, class-II (G, H, P and S), score 4.7e-18" gene complement(2603209..2603844) /locus_tag="CMS_2458" /old_locus_tag="CMS2458" /db_xref="GeneID:6158757" CDS complement(2603209..2603844) /locus_tag="CMS_2458" /old_locus_tag="CMS2458" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711115.1" /db_xref="GI:170782781" /db_xref="GeneID:6158757" /translation="MAAPDPHRRQDLLAHILDHLRAHPLQSVTFRGLADALGESTFVL VYHFGSKERLLEAAMDAVDQRQAEMVEGDPREIGPGELREWITRAWGWRLTDVNRDFQ RLEFEAALLRTRDGVVRPDAIASVSAWRRFALEWMLAHGVPDDVALDTADLLQAGSYG LQFDFVISGDRDRAMRGFEALIDAFTPRIQPWLDLAEEQGSPGAPERPPAA" gene complement(2603999..2604706) /locus_tag="CMS_2459" /old_locus_tag="CMS2459" /db_xref="GeneID:6158049" CDS complement(2603999..2604706) /locus_tag="CMS_2459" /old_locus_tag="CMS2459" /note="functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase" /protein_id="YP_001711116.1" /db_xref="GI:170782782" /db_xref="GeneID:6158049" /translation="MAALRAPDGCVWNRGMTHRTLVPYLLEESHELVEAIETDDVPGM REELADVLLQVVFHADIARTEGGGFDLADVARTATEKMVRRHPHVFGDERADIVEEVL RVWGAAKDREKSARTSVVDGIPMGMPSLALADKLLGRAERVGLLEADAPAAIPVDDED DLGRLLLAVVVSARSRGLDAERALRTTLRSLTAEIRAAEPAAGAGGGAAGGGAAGEGS AGAAADDDTAPGAGRSA" misc_feature complement(2604437..2604661) /locus_tag="CMS_2459" /old_locus_tag="CMS2459" /inference="protein motif:HMMPfam:PF03819" /note="HMMPfam hit to PF03819, MazG nucleotide pyrophosphohydrolase, score 3e-36" gene 2604841..2606136 /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /db_xref="GeneID:6158050" CDS 2604841..2606136 /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /codon_start=1 /transl_table=11 /product="putative sodium/proton antiporter" /protein_id="YP_001711117.1" /db_xref="GI:170782783" /db_xref="GeneID:6158050" /translation="MCREVWSAAGDRLPLPRPRKASMTSLIRSERVAAGLLLLAAVVG LVVANTPAGPGLIAWADGHLAVPAIGVDLSLRHWVSDGLLVVFFFIVAVELKHEFLAG GLDSVSAALVPAIAAVGGVAVPAGVYLAITAGSGLERGWPVPTATDIAFALGVLAVFG RGLPAAVRVFLLALAVLDDLIAIVIIAVFFTTDLDVGALGLAVAGVVLFAVVGRLGVG RTGAARIAVVALLVLIALVTWWATLSSGIHATIAGVALGFALPRLSGLRAAHALEPAS NGIVLPLFAFSAALVAIPAVGLAELAPAFWGIALALPLGKLVGITAGGLLGAWVARRR GAPSGLAGRDLVTVSLLGGIGFTVSLLMSELAFAGLDEVRDEGTLAVLLGSGVSIVAA AVTLSIRSHQARRGSAAAEEDDATRDDFPAHVDGGPAPS" sig_peptide 2604841..2605020 /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /note="Signal peptide predicted for CMS2460 by SignalP 2.0 HMM (Signal peptide probability 0.922) with cleavage site probability 0.708 between residues 60 and 61" misc_feature 2604907..2606028 /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /inference="protein motif:HMMPfam:PF06965" /note="HMMPfam hit to PF06965, Na+/H+ antiporter NhaA,score 8.2e-77" misc_feature order(2604946..2605014,2605057..2605125,2605162..2605230, 2605258..2605326,2605345..2605413,2605426..2605494, 2605513..2605569,2605579..2605638,2605675..2605743, 2605753..2605821,2605855..2605923,2605966..2606034) /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /note="12 probable transmembrane helices predicted for CMS2460 by TMHMM2.0 at aa 36-58, 73-95, 108-130, 140-162,169-191, 196-218, 225-243, 247-266, 279-301, 305-327,339-361 and 376-398" misc_feature 2605639..2605770 /locus_tag="CMS_2460" /old_locus_tag="CMS2460" /note="PS00041 Bacterial regulatory proteins, araC family signature." gene 2606302..2607402 /locus_tag="CMS_2461" /old_locus_tag="CMS2461" /db_xref="GeneID:6158051" CDS 2606302..2607402 /locus_tag="CMS_2461" /old_locus_tag="CMS2461" /note="Unusually low GC content" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711118.1" /db_xref="GI:170782784" /db_xref="GeneID:6158051" /translation="MEPARPASLPQSRRFIHTFALASIAPCFWIAGLVVNIASPSSAS ALPQFAWVSVWGVTLGDVTTNSLLSYLAVTIVLFGISLGGQSTFEDQKHQERVRRSVG AVGVLMAVAALVLTTFAVGATFSDVRRIPALVVILPAAATCWLLGMEVGRFVVPDHET QLTGTAASLSKAEDRLRRVESSIPEAASVKPPLWIILGHAFAFSVIAELAIEQKSENT WVIACVTFVGMAMGLIVFTQLGAGSLGVESQLAAFGMCAMAFILYAVLLSMFNIIALF TSEAPVECIAVLYGAELLVPILCSHLWRMLPEALFTASLSGAMAWVFRNDSLRTVRNL TRRLNDLERLRATAAPKGLRERLRAAGRTFVS" sig_peptide 2606302..2606430 /locus_tag="CMS_2461" /old_locus_tag="CMS2461" /note="Signal peptide predicted for CMS2461 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.737 between residues 43 and 44" misc_feature order(2606344..2606412,2606497..2606565,2606608..2606676, 2606695..2606763,2606875..2606934,2606953..2607021, 2607049..2607117,2607154..2607222) /locus_tag="CMS_2461" /old_locus_tag="CMS2461" /note="8 probable transmembrane helices predicted for CMS2461 by TMHMM2.0 at aa 15-37, 66-88, 103-125, 132-154,192-211, 218-240, 250-272 and 285-307" gene complement(2607444..2611076) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /db_xref="GeneID:6158052" CDS complement(2607444..2611076) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="YP_001711119.1" /db_xref="GI:170782785" /db_xref="GeneID:6158052" /translation="MILQGLIPALSRASTFDDALASASRDADFSLTEGLQGPLLAGLL RQRIQRGIPGCLLVVTATGRESEGMRRSLDAVLPDAEILEFPAWETLPHERLSPSAEI VGKRIHALRRMEQWHAALGQGAREVPADQVRPLVIVASVRAALQPVADNLTELAPVQL ATGSRGHDLSELAVRLVDLAYSRVDMVTRRGEFAVRGGILDVFPPVSDHPVRVEFFGD EVDQMRPFAVADQRSLEEEITSVELPPSRELLLSAPVRQRAREMQHEFPNLQQMLAKI AEGIPVEGMESLAPALVDRLVPVTHYLPVDAAIAVVSPERVSTRAQSLADTNREFLDA AWNAATAGAQAPIDLASGDFLSLGRLRDARGPRRWWTLSGFQATDVLPEDLGIDEVMT VRIQADPVPSFAGNADGAIEHVRERLAAGWAVGVVAQGSGLVERADTVLRDAGVPARV VEEFPAEPEPGIAYLLRSAIDAGFEMPEVKLALLTESEFYGRAAGYDSRQVKKLATRR KNVVDPLQLKPGDHVVHTTHGIGKFVELTQREVSSGGRDTVKTRREYLVIEYAPSKRG YPGDKLFVPTDQLDLLSRYVGGEEPSLSKMGGSDWAAAKGKARRAVRDIAVELVKLYS ARMASRGHSFPPDTPWQRELEEAFPFMETPDQLTVIDEVKRDMESPIPMDRLVSGDVG FGKTEIAVRAAFKAVQDGKQVVMLVPTTLLVKQHFETFSERFAGFPVHLRQLSRFQSE KESRETVKGLEDGSVDVVIGTHRLLTGSIAFKDVGLVIIDEEQRFGVEHKDALKKLKA NVDILAMSATPIPRTLEMAVTGIREMSTLATPPEDRHPILTFVGPNSEKQIAAAIRRE LLREGQVFFVHNRVSSINRVASELAELVPEARVAVAHGKMSEAMLEQVIVDFWERKFD VLVSTTIIETGLDIANANTLIIDRADKYGLSQLHQLRGRVGRGRERAYAYFLYDADKP LSETAHDRLSTIAANNELGSGMQVALKDLEIRGAGNLLGGEQSGHIQGVGFDLYLRMI GEAVSTFRGDVAEGQTELRLELPVDAHIPEEYVDSERLRLEAYQKLSTAASPTATDDQ IDRVIEELSDRYGEPPVEVDNLVRVSRLRRVAQRAGLSEVVAMGRNLRIAPADLADSK QVRLQRMYPGSRLFAQTNAVTVPLPKRDGEPLPDAELVDWVRQLLDAVFTVEPAPAAK ESAPKA" misc_feature complement(2607594..2607926) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /inference="protein motif:HMMPfam:PF03461" /note="HMMPfam hit to PF03461, TRCF, score 2.3e-22" misc_feature complement(2608203..2608436) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 7.6e-17" misc_feature complement(2608626..2609123) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 2.3e-36" misc_feature complement(2608641..2609129) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /inference="protein motif:HMMPfam:PF04851" /note="HMMPfam hit to PF04851, Type III restriction enzyme, res subunit, score 1.2e-05" misc_feature complement(2609019..2609042) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2609205..2609531) /gene="mfd" /locus_tag="CMS_2462" /old_locus_tag="CMS2462" /inference="protein motif:HMMPfam:PF02559" /note="HMMPfam hit to PF02559, Transcription factor CarD,score 3.8e-44" gene complement(2611163..2611750) /gene="pth" /locus_tag="CMS_2463" /old_locus_tag="CMS2463" /db_xref="GeneID:6158813" CDS complement(2611163..2611750) /gene="pth" /locus_tag="CMS_2463" /old_locus_tag="CMS2463" /EC_number="3.1.1.29" /note="Enables the recycling of peptidyl-tRNAs produced at termination of translation" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="YP_001711120.1" /db_xref="GI:170782786" /db_xref="GeneID:6158813" /translation="MDDRTLLVVGLGNPGPQYAGTRHNVGQMALDVLADRMRATFRSH RANAQVAEGRAVPGGPKLILAKPNSFMNLSGGPVANLLSYFSLEPAQLVVAHDELDIP FDSMKLKQGGGHGGHNGIRDIISSAGTGDFTRVRIGIGRPPGRQDAADFVLKPFSSTE RQVLPNVLEDAADAVEMIASEGLIAAQLRFHTAAS" misc_feature complement(2611178..2611729) /gene="pth" /locus_tag="CMS_2463" /old_locus_tag="CMS2463" /inference="protein motif:HMMPfam:PF01195" /note="HMMPfam hit to PF01195, Peptidyl-tRNA hydrolase,score 4.2e-72" misc_feature complement(2611382..2611414) /gene="pth" /locus_tag="CMS_2463" /old_locus_tag="CMS2463" /note="PS01196 Peptidyl-tRNA hydrolase signature 2." misc_feature complement(2611658..2611699) /gene="pth" /locus_tag="CMS_2463" /old_locus_tag="CMS2463" /note="PS01195 Peptidyl-tRNA hydrolase signature 1." gene complement(2611903..2612547) /gene="rplY" /locus_tag="CMS_2464" /old_locus_tag="CMS2464" /db_xref="GeneID:6158887" CDS complement(2611903..2612547) /gene="rplY" /locus_tag="CMS_2464" /old_locus_tag="CMS2464" /note="the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L25/general stress protein Ctc" /protein_id="YP_001711121.1" /db_xref="GI:170782787" /db_xref="GeneID:6158887" /translation="MVDNNLSAELRTQFGKGAARKIRAVGKIPAVIYGHGTDPQHVTL PGHELMLIIRKANQIITLDIAGTPQLVLVKDVQKDPVRQIIEHVDLIVVRRGERVEVE VPIHVEGESYPGTIHNLENTSITVDVEATHIPERFTVSIEGFEEGTQITVGQVDLPAG ANLVTDPETLVLAISVPQLDLTTDAVDEDVVAEGDADVAVTDDGATGDQSGDDK" misc_feature complement(2612278..2612532) /gene="rplY" /locus_tag="CMS_2464" /old_locus_tag="CMS2464" /inference="protein motif:HMMPfam:PF01386" /note="HMMPfam hit to PF01386, Ribosomal protein L25,score 1.9e-31" gene complement(2612718..2614739) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /db_xref="GeneID:6158953" CDS complement(2612718..2614739) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /codon_start=1 /transl_table=11 /product="putative multifunctional enzyme" /protein_id="YP_001711122.1" /db_xref="GI:170782788" /db_xref="GeneID:6158953" /translation="MDERTQTVAPHEFLTEPQGVIRIDAVRPFPPVIVMGVSGSGKST VGELLAQDAGVPFIDGDDLHPEANRRKMAEGHALDDDDRRPWLEEVGRALAGRPEGGP VVACSALKRSYRDILRAAAPDAVFVHLVGDHDLLAERLGGREGHFMPSSLLSSQLRTL EPLGDDEQGITLDITDDPVALADAAVRELLPGGRTASPGRVDDAPATSTEPAAAVPEA DVPALVREARSGSDVPHTGAAADAAAPSEPGHHAAAVPSAAVREADAAPAAVEGAPAA VVHEPIRVAIVGCGVIGTHHARVLAEHPEFRVAALVDELRAERPRVFAHLGDLIRADA AELVVICTPSGLHIGLAEEALAAGLHVVIEKPLDVDLARGRRIAELAREAAGRGILST VISQHRFNPSSVVVDRAVRSGRLGRLTSAVASAPWWRSQGFYDSGHWRGTWDLDGGGA LMNQGVHTLDLLVSYLGRPVEVYAQTALLAHDGIEVEDVAVAVIRFASGALATLQATT AGYPGLDTRVQVQGTRGSAVIEAGSLTYFHAAPASGVPAQADVRNDAELEIHDADLPR SPRLDNTYLEGHYRQYDDIADALRVGRPAGVTVDDAFVSLATVVSVYVSATLGTPVAF EDVVDGVHDGLRLRVGQSMPPAPGSPAPASAPASAAASADASTGDPSVR" misc_feature complement(2613177..2613521) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 4.4e-10" misc_feature complement(2613549..2613896) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 5.7e-20" misc_feature complement(2614170..2614628) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /inference="protein motif:HMMPfam:PF01202" /note="HMMPfam hit to PF01202, Shikimate kinase, score 2.5e-09" misc_feature complement(2614611..2614634) /locus_tag="CMS_2465" /old_locus_tag="CMS2465" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2614823..2616277 /gene="gnd" /locus_tag="CMS_2466" /old_locus_tag="CMS2466" /db_xref="GeneID:6158053" CDS 2614823..2616277 /gene="gnd" /locus_tag="CMS_2466" /old_locus_tag="CMS2466" /EC_number="1.1.1.44" /note="catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase" /protein_id="YP_001711123.1" /db_xref="GI:170782789" /db_xref="GeneID:6158053" /translation="MSDDQQATANIGVVGLAVMGSNLARNLASREGNTVAVYNRTTQK TTDLVEEHPEAGFVAATTIEEFAASLQRPRTAIIMVKAGRGTDAVIEQLTEAFEEGDI IVDGGNALFTDTIRREKEVRAKGLHFVGAGISGGEEGALKGPSIMPGGTAEAYETLGP ILESIAAVAEGKPCVTHIGTDGAGHFVKMIHNGIEYADMQLIAESFDLLRRVGGHEPD AIADVFEEWNGGDLESYLIEITAEVLRQKDAATGKPLVDVIVDQAGSKGTGVWTVQNA VGLGVPVGGIAEAVFARAVSSKPEQRKAVQATITSRPEIQSGGDTFEDDVRAALYASK VVAYAQGFDAIEAGAKEYGWDIDKGKVAEIWRGGCIIRAQFLNRIVEAYEKDSGLATL LEDPYFAKAVADGEQAWRRVVSVAALSGIPVPGFASALSYYDSLASERLPAALVQGQR DFFGAHTYHRTDKEGTFHTLWSGDRSEVEAEDTH" misc_feature 2614844..2615362 /gene="gnd" /locus_tag="CMS_2466" /old_locus_tag="CMS2466" /inference="protein motif:HMMPfam:PF03446" /note="HMMPfam hit to PF03446, 6-phosphogluconate dehydrogenase, NAD-binding, score 1.8e-86" misc_feature 2615366..2616238 /gene="gnd" /locus_tag="CMS_2466" /old_locus_tag="CMS2466" /inference="protein motif:HMMPfam:PF00393" /note="HMMPfam hit to PF00393, 6-phosphogluconate dehydrogenase, C-terminal, score 1e-153" misc_feature 2615597..2615635 /gene="gnd" /locus_tag="CMS_2466" /old_locus_tag="CMS2466" /note="PS00461 6-phosphogluconate dehydrogenase signature." gene 2616348..2616722 /locus_tag="CMS_2467" /old_locus_tag="CMS2467" /db_xref="GeneID:6158732" CDS 2616348..2616722 /locus_tag="CMS_2467" /old_locus_tag="CMS2467" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711124.1" /db_xref="GI:170782790" /db_xref="GeneID:6158732" /translation="MDEDEHPELAGYEPHRPRSLRSRRTLLVMRVVVVVGIVSLLLPG VVTMVRVGANTADMACADFVAYERPDSPSYEVRFQLFGPGVVGYECYTRYAFGGDEHI VSLGLIPSGRVAREVVERNSRD" misc_feature 2616423..2616491 /locus_tag="CMS_2467" /old_locus_tag="CMS2467" /note="1 probable transmembrane helix predicted for CMS2467 by TMHMM2.0 at aa 26-48" gene 2617089..2618171 /locus_tag="CMS_2468" /old_locus_tag="CMS2468" /db_xref="GeneID:6158054" CDS 2617089..2618171 /locus_tag="CMS_2468" /old_locus_tag="CMS2468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711125.1" /db_xref="GI:170782791" /db_xref="GeneID:6158054" /translation="MDLPTTRRRSLPCIVPRRETRIPDAVLRRLLVCRHRHHRPSGRD RAHSSRATPKHHHHEFGRDLDHRHSHRADSGGLDVVPRGQQDYTEPQPGSSSYSSRPH GQERMMRSPRRWSSLTAGAVLALLALAQPANAAPHSHRAFDDTALRQHMSSLGIHAEV QGRLIVKLKAGQRVDSMTDTASVSTQVRIKDGYSVSIDTYADGSVGETGNEIGRPATP DEVMVMQARAKPFASPYYHGDSVDHEGLIQPDATVGITSCVRGRNAGVVYAQNCHVYY NGVTASNSFNANYQQYPGGGKAQYIDGTAKFVSFVQSVNNEHVDVYDNGSRIRYSFST SLNGFGNIPGFLQLKVTGTGVYVSRG" gene complement(2618267..2619244) /gene="prs" /locus_tag="CMS_2469" /old_locus_tag="CMS2469" /db_xref="GeneID:6158055" CDS complement(2618267..2619244) /gene="prs" /locus_tag="CMS_2469" /old_locus_tag="CMS2469" /EC_number="2.7.6.1" /note="catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="YP_001711126.1" /db_xref="GI:170782792" /db_xref="GeneID:6158055" /translation="MSAIKTAGEKRLVIVTGRAHPELAEQIAEELETTLVHTDARTFA NGELYIRYDESVRGSDAFVIQSHTAPINEWLMEQLIMVDAMKRASAKRITVVAPFYPY ARQDKKGRGREPISARLVADLFKAAGADRIMSVDLHAAQIQGFFDGPVDHLFAMPVLL EHMRSVLDSKTLTVVSPDMGRVRVADIWSDKLGAPLAIIHKRRDPKVHNQVTVHEIVG DVAGRVCLLVDDLIDTGRTIVSAAEALKKNGATGVVVAATHAVFSDPATQILDSEHID SVVVTDTLPIPEDKRWDKLTVLPIAPLLARAIHEVFDDGSVTSMFDGAA" misc_feature complement(2618405..2618806) /gene="prs" /locus_tag="CMS_2469" /old_locus_tag="CMS2469" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 1.5e-26" misc_feature complement(2618534..2618572) /gene="prs" /locus_tag="CMS_2469" /old_locus_tag="CMS2469" /note="PS00103 Purine/pyrimidine phosphoribosyl transferases signature." misc_feature complement(2618792..2618839) /gene="prs" /locus_tag="CMS_2469" /old_locus_tag="CMS2469" /note="PS00114 Phosphoribosyl pyrophosphate synthetase signature." gene complement(2619278..2620759) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /db_xref="GeneID:6158886" CDS complement(2619278..2620759) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /EC_number="2.3.1.157" /EC_number="2.7.7.23" /note="forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis" /codon_start=1 /transl_table=11 /product="bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase" /protein_id="YP_001711127.1" /db_xref="GI:170782793" /db_xref="GeneID:6158886" /translation="MTGELDVDGEPRSPSIAVVILAAGQGTRMRSRLPKVLHPLAGLP LVGHVLATAEELGARHVVTVVRHDRDQVVDVVSRLAPDALIVDQDEIPGTGRAVEVGI TALPDGFTGQVVVLSGDVPLLDAATLRSLVSAHRQARNDLTLLTARLDDPTGNGRIIR GQDGAFEAIVEQKDATGEQLRIDEVNAGVYVFDAEALRQTLGAIGTDNAQREKYLTDA ADVIRRAGGSIEALPVRDSWLVAGINDRVQLTAAATELNARIIRRWQLAGVTIHDPRT TWIDVKATLAADVTVLPGTQILGASTVAAGATVGPDTTLRDTEVGEDATVRRTDAELA VIGARATVGPFSFLRPGTRLGDEGKIGAYVETKNVEIGAGSKVPHLSYVGDATIGEHS NVGAGAVFANYDGVSKHRTEVGDHVHLGSRNVLVAPVRIGTGSYTGAGAVIRKDVPPG ALGISVAPQRNMVGWTEAKRPGTPEARAAVEAADGPADDASDA" misc_feature complement(2619425..2619478) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 9.4" misc_feature complement(2619479..2619532) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 62" misc_feature complement(2619554..2619604) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 68" misc_feature complement(2619605..2619658) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 4.6" misc_feature complement(2619710..2619763) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 19" misc_feature complement(2619809..2619862) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 30" misc_feature complement(2619863..2619916) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 17" misc_feature complement(2619992..2620711) /gene="glmU" /locus_tag="CMS_2470" /old_locus_tag="CMS2470" /inference="protein motif:HMMPfam:PF00483" /note="HMMPfam hit to PF00483, Nucleotidyl transferase,score 6.4e-09" gene complement(2620856..2620927) /locus_tag="CMS_r048" /old_locus_tag="CMSr048" /db_xref="GeneID:6158721" tRNA complement(2620856..2620927) /locus_tag="CMS_r048" /old_locus_tag="CMSr048" /product="tRNA-Gln" /db_xref="GeneID:6158721" gene complement(2620983..2622374) /locus_tag="CMS_2471" /old_locus_tag="CMS2471" /db_xref="GeneID:6159037" CDS complement(2620983..2622374) /locus_tag="CMS_2471" /old_locus_tag="CMS2471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711128.1" /db_xref="GI:170782794" /db_xref="GeneID:6159037" /translation="MVLVLPVRQTPEAPEWLRLYREDLLTLDEVGLVEGVTREAIRRR LRALGISPRSLGETLDLRRLRAVSEKATAMTESFLRLRDLDEVAADVGLQRSWVARFI SETVPDYAVLTRVPRLGAKRYSNEELIGCLQAAAVAEGRTLSAQAYQRHAIQNPRLED GRPAPGMQVMAIRFGSWRSALEAAGLPANPHSGQDKRFDEATAVAAVISCWRETGRPP TAASYDEWQRSQEIFPSGSTVRNLCGSWNALLLRAWQMVHGIELDQHDSETSVPEPIL RAREVVEGSGGFVPYVSANEGADVELPHYFAENYAGNERAVRSHARIQNAVAVVAEAM GFQCLSSSIQGPRFDLALLGGSQAFIVEVKSASESNIEHQMRMALGQVLKYCHSVRNS LPVRPVIAVEIFPGEEWSAVLNELGVGLLVEESMVTDFERFVQEACAPITESGSVMPV APAPGKAAIPVAR" misc_feature 2620989..2622479 /note="submitted with no further information" misc_feature complement(2622237..2622302) /locus_tag="CMS_2471" /old_locus_tag="CMS2471" /note="Predicted helix-turn-helix motif with score 1385.000, SD 3.90 at aa 25-46, sequence LTLDEVGLVEGVTREAIRRRLR" gene 2622552..2623055 /locus_tag="CMS_2472" /old_locus_tag="CMS2472" /db_xref="GeneID:6158056" CDS 2622552..2623055 /locus_tag="CMS_2472" /old_locus_tag="CMS2472" /codon_start=1 /transl_table=11 /product="MarR family regulator" /protein_id="YP_001711129.1" /db_xref="GI:170782795" /db_xref="GeneID:6158056" /translation="MPSRDEVDRIVDAWRRERPDLDFSPLEVLSRVGRLSRLLERARR SAFQESELESWEFDVLSALRRAGDPYQLSPKALLQQTLVSSGTMTNRIDRLVARGLVE RRTDPHDGRGILVVMSDAGRTRVDTAITRLVAEEAELLETLPAADRDVLAGLLRQLIL DLDDDGA" misc_feature 2622705..2623025 /locus_tag="CMS_2472" /old_locus_tag="CMS2472" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 9.7e-18" gene complement(2623104..2623460) /locus_tag="CMS_2473" /old_locus_tag="CMS2473" /db_xref="GeneID:6158057" CDS complement(2623104..2623460) /locus_tag="CMS_2473" /old_locus_tag="CMS2473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711130.1" /db_xref="GI:170782796" /db_xref="GeneID:6158057" /translation="MADDAAPAPADPRAALAALRADTLALIRGLDRDVAAIVEARQDA NSDDEHDPEGATLAFERSQSDAMIREARVRLADVDAAVARLDAGAYGRCEVCGEAIAA GRLEIRPAARRCVAHA" gene complement(2623468..2624487) /locus_tag="CMS_2474" /old_locus_tag="CMS2474" /db_xref="GeneID:6158058" CDS complement(2623468..2624487) /locus_tag="CMS_2474" /old_locus_tag="CMS2474" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711131.1" /db_xref="GI:170782797" /db_xref="GeneID:6158058" /translation="MSMTVPLSILDLAPIAPGETARDSFQASVALAQQAERSGYRRVW YAEHHNMASIASSATSVLIAHVASQTSTIRLGSGGVMLPNHSPLTIAEQFGTLETLHP GRIDLGLGRAPGSDQATFRALRRDPGSSDRFPEDVVELQGFLSGESQVPGVAATPGAG TRVPLYILGSSTFGAQLAAALGLPFAFASHFAPDMLLDAIAIYRRDFRPSEQLDAPYA IAGINAIAADDRADAERQFAQVRRARLMMLLRQSGQIPATQTFTDDELDRLLEAPVGA HVASMMTYTAIGTGAEVSDYANRFAEQAGVDEVIVGHASQRTPERLRSVDLMADAHAL VAVAA" misc_feature complement(2623492..2624475) /locus_tag="CMS_2474" /old_locus_tag="CMS2474" /inference="protein motif:HMMPfam:PF00296" /note="HMMPfam hit to PF00296, Bacterial luciferase, score 5.1e-17" gene complement(2624484..2625302) /locus_tag="CMS_2475" /old_locus_tag="CMS2475" /db_xref="GeneID:6158059" CDS complement(2624484..2625302) /locus_tag="CMS_2475" /old_locus_tag="CMS2475" /codon_start=1 /transl_table=11 /product="putative amino acid export protein" /protein_id="YP_001711132.1" /db_xref="GI:170782798" /db_xref="GeneID:6158059" /translation="MQAMHPLAHALSGFGLGFSLIAAIGAQNAFVLRQGTRREHVLPV VLICAVSDVILIGLGVAGIGAVIEAAPVAIVVIRILGACFLAGYAALSLLRAVAPEGL AVAASAPRALGAVIAACLALTWLNPHVYLDTVLLVGSVAAGHGDGRWAFGIGAMAASC VWFTLLATAARVFAPLLARPAAWRVLDTVIAAVMLVLAVQILLPLVPAGPGEGARILV ATAICVLLAGGVAAWSVVRRRRADAVRRDRTTADAPAAPASDGQGTVEASALLA" sig_peptide complement(2624484..2624561) /locus_tag="CMS_2475" /old_locus_tag="CMS2475" /note="Signal peptide predicted for CMS2475 by SignalP 2.0 HMM (Signal peptide probability 0.889) with cleavage site probability 0.518 between residues 26 and 27" misc_feature complement(order(2624595..2624663,2624691..2624759, 2624793..2624861,2624919..2624987,2625021..2625089, 2625102..2625170,2625207..2625275)) /locus_tag="CMS_2475" /old_locus_tag="CMS2475" /note="7 probable transmembrane helices predicted for CMS2475 by TMHMM2.0 at aa 10-32, 45-67, 72-94, 106-128,148-170, 182-204 and 214-236" misc_feature complement(2624688..2625251) /locus_tag="CMS_2475" /old_locus_tag="CMS2475" /inference="protein motif:HMMPfam:PF01810" /note="HMMPfam hit to PF01810, Lysine exporter protein (LYSE/YGGA), score 2.1e-46" gene 2625363..2626258 /locus_tag="CMS_2476" /old_locus_tag="CMS2476" /pseudo /db_xref="GeneID:6158060" misc_feature 2625378..2625554 /locus_tag="CMS_2476" /old_locus_tag="CMS2476" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 1.2e-11" /pseudo misc_feature 2625642..2626247 /locus_tag="CMS_2476" /old_locus_tag="CMS2476" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 1.4e-07" /pseudo gene complement(2626293..2626952) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /db_xref="GeneID:6158061" CDS complement(2626293..2626952) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /codon_start=1 /transl_table=11 /product="putative integral membrane amino acid transport protein" /protein_id="YP_001711133.1" /db_xref="GI:170782799" /db_xref="GeneID:6158061" /translation="MDALTPLLPLLGRSTVETLVMVLLTLLFGGLGGLAMGLGLYLTR AGSLLPNRSVFAVLNLVVNTFRPIPFVIFLVAAQPLARLVTGNGIGQPAIIFTLSLGA SFAISRIVEQNLLTVQPGVIEAARSVGASPVRIIFTLLIPEALGPLILGYTFVFVGIV DMTAVAGAIGAGGLGNFAIVYGYRQFEPVVTWAAVLIIIVLVQVVQFAGNRMARAALR R" sig_peptide complement(2626353..2626433) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /note="Signal peptide predicted for CMS2477 by SignalP 2.0 HMM (Signal peptide probability 0.764) with cleavage site probability 0.268 between residues 27 and 28" misc_feature complement(2626299..2626889) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.0013" misc_feature complement(order(2626323..2626391,2626404..2626463, 2626482..2626550,2626638..2626706,2626725..2626793, 2626821..2626889)) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /note="6 probable transmembrane helices predicted for CMS2477 by TMHMM2.0 at aa 2-24, 34-56, 63-85, 115-137,144-163 and 168-190" misc_feature complement(2626527..2626613) /locus_tag="CMS_2477" /old_locus_tag="CMS2477" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(2626954..2627991) /locus_tag="CMS_2478" /old_locus_tag="CMS2478" /db_xref="GeneID:6158062" CDS complement(2626954..2627991) /locus_tag="CMS_2478" /old_locus_tag="CMS2478" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711134.1" /db_xref="GI:170782800" /db_xref="GeneID:6158062" /translation="MTDAPHVSLRGVGKQYPPRAKGEQGLDALADVDLDIRRGEVFGI IGYSGAGKSTLVRLVNALERPTSGTVSVDGREIQGLPERELRKLRLGIGMVFQQFNLF TSKTVWGNVAYPLTVAGMPKDQQQRRISDLLHFVGLADKAHARPDELSGGQKQRVGIA RALATSPAILLADEATSALDPETTSEVLALLRRVNEELGVTIVVITHEMEVIKSIADR VAVMDSGRVIEQGDVFDVFSRPTSDAARRFVSTVVAGIPETDEVQRLRRRHPGRLVTL SFADGGATQTEVFRALAAAGIAFEVVHGGITEIQGRTFGNLTLALGGDPARIDEVLAA DRAGVTVTEVV" misc_feature complement(2627317..2627877) /locus_tag="CMS_2478" /old_locus_tag="CMS2478" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4e-74" misc_feature complement(2627503..2627547) /locus_tag="CMS_2478" /old_locus_tag="CMS2478" /note="PS00211 ABC transporters family signature." misc_feature complement(2627833..2627856) /locus_tag="CMS_2478" /old_locus_tag="CMS2478" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2627988..2628920) /locus_tag="CMS_2479" /old_locus_tag="CMS2479" /db_xref="GeneID:6158063" CDS complement(2627988..2628920) /locus_tag="CMS_2479" /old_locus_tag="CMS2479" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711135.1" /db_xref="GI:170782801" /db_xref="GeneID:6158063" /translation="MTTQAPLIDAPKRRNRLGLIIGAVVVVLAIVAAVLFATGAFNGG GKAVKIGVVGASNPQWPLFVEAAKEQGIDVEIVDFTEYPQLNPALSEGEIDLNQFQHL VYLAQYNEGAGDDLTPIGATAIYPLGLYSQKHASVAEIPQGGTVILPNDESNLARGLL LLQREGLLTLKGGGSSVSTLDDVDQAASKVTVTTVDAALTATSLPDADAVIINNDFVT DAGLTSDEALAQDDPSDPKALAYVNVFASRADDAENETYLKLARIFEDTPAVVDAVVE NSGGTAVPLKTPQDELESLLATTQKAVAEKKAAR" sig_peptide complement(2627988..2628098) /locus_tag="CMS_2479" /old_locus_tag="CMS2479" /note="Signal peptide predicted for CMS2479 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.431 between residues 37 and 38" misc_feature complement(2628063..2628779) /locus_tag="CMS_2479" /old_locus_tag="CMS2479" /inference="protein motif:HMMPfam:PF03180" /note="HMMPfam hit to PF03180, NLPA lipoprotein, score 6.2e-60" misc_feature complement(2628804..2628872) /locus_tag="CMS_2479" /old_locus_tag="CMS2479" /note="1 probable transmembrane helix predicted for CMS2479 by TMHMM2.0 at aa 17-39" gene 2629238..2630167 /locus_tag="CMS_2480" /old_locus_tag="CMS2480" /db_xref="GeneID:6158064" CDS 2629238..2630167 /locus_tag="CMS_2480" /old_locus_tag="CMS2480" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711136.1" /db_xref="GI:170782802" /db_xref="GeneID:6158064" /translation="MAGSATEVPMHEDDDAVAALPVEELRRRVYAQGVDESDERWIRA AGELARRERAARAAAAAPASAPAAPLDDGAAAPLDDGPAGASDVVDDAAAADPTTEDG PARDDAPPRVSRRALAWAAGALAVGLLAGGAIGAAAGAGSPAATSADGTPSPGADAPP AAERSIPAATASADGPALLGPDSTSDQRSRPVGAIFDGPQEDGDRPPKAVRADVDATS IRAVQTSVGLYAGLSTSGDLCLLVFPSGGAGVVTCASPDRVASDGMRIAWTTEFPSRN RDGSTGMITGDVTATWSGDDLITLTTPNRILAY" gene 2630226..2631074 /locus_tag="CMS_2481" /old_locus_tag="CMS2481" /db_xref="GeneID:6158065" CDS 2630226..2631074 /locus_tag="CMS_2481" /old_locus_tag="CMS2481" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711137.1" /db_xref="GI:170782803" /db_xref="GeneID:6158065" /translation="MDARAPGQDDDLITLPLDALRERVYAQGADETDERWIRAAAELT RRERGHSPAAGAEDGGAEDGGAAVGTSEADADATARPSRRPLAWAGAALVVGLLAGAG IATSLGGSATPSADATATPSAIATASAEPAPDPASVRSLLGADISRTSDPVAVDGILA APQEEADTPPRSPGGDIDLTSIRGVQTSVGLYVARTSSGDACLLVYPWSGSAPAAGNS PGSGVASCAPPAQLAVSGLEITWIADVPARAFDGSVRMAGGGLSVVWSPDGTLTLSSP DALLAY" misc_feature 2630481..2630549 /locus_tag="CMS_2481" /old_locus_tag="CMS2481" /note="1 probable transmembrane helix predicted for CMS2481 by TMHMM2.0 at aa 86-108" gene complement(2631109..2632884) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /db_xref="GeneID:6158066" CDS complement(2631109..2632884) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711138.1" /db_xref="GI:170782804" /db_xref="GeneID:6158066" /translation="MIFDEVTIGVNEGDRIGIVGRNGDGKSTLLSLLAGRLEPDSGRV TRRRGITIGVLDQSDTLPDGQTVGEAIVGGIDEHEWAGNPLVRDVIDGLASDVPWDAD VAQLSGGQRRRVALAKLLIGDHDILFLDEPTNHLDVEGIAWLAGHLRRRWAPNSGGLI VVTHDRWFLDEVANATWEVHDRLIEPFEGGYAAYILQRVERDRSAAVSEAKRQNLMKK ELAWLRRGAPARTAKPKFRIEAANALIADEPPARDAVSLASMAMQRLGKDVVDLLDVS VSYGEKQILKDVEWRIAPGERTGILGVNGAGKSTLLSLVAGSLQPTTGKVKRGKTIKV AVLTQQLDELKDVLEDRVSTVIGRQRTTYVAGGKEMTPGQLLERLGFTSAQLSTPVKD LSGGQKRRLQLLLIVLDEPNVLILDEPTNDLDTDMLAAMEDLLDSFPGTLLVVSHDRY LIERVTDQQYAVMNGNLRHLPGGVEQYLKLRAQPGNAEKATVARPDEVGGQATATLGG SGGSGGSQLQGAELRNAQKELASISRKLEKADTRRRQTLDAMAAHDPNDYDGLGKLNE GVRAIEAEVEAFESRWMELSELLEG" misc_feature complement(2631490..2632002) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.4e-36" misc_feature complement(2631664..2631708) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /note="PS00211 ABC transporters family signature." misc_feature complement(2631892..2631915) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2631958..2631981) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2632339..2632848) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.7e-36" misc_feature complement(2632525..2632569) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /note="PS00211 ABC transporters family signature." misc_feature complement(2632804..2632827) /locus_tag="CMS_2482" /old_locus_tag="CMS2482" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2633085..2634377 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /db_xref="GeneID:6158067" CDS 2633085..2634377 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /codon_start=1 /transl_table=11 /product="putative drug efflux protein" /protein_id="YP_001711139.1" /db_xref="GI:170782805" /db_xref="GeneID:6158067" /translation="MTTSRTETASVPAAGAPVASAPSPARRESAAGLLVYALTLLVLV ASGAAPSPLYPVYQEEWALPPVVLTVVFAVYVAGLLATLLTAGRLSDHIGRRPVILGA LAVSTAAMLVFAFAHDGLALVVARILQGLAIGLATGALGAGMIDHQPTRRSGLAAFLN GVVPPAALTVGALGSGFLVAYGPAPEETVFVVLAALMVAAGIAVAFVPERQPRRAGAL RSLVPSVAVPRAARSVFTAVVGGMIASWALGGMFLAFIGSVLGTTFGLHSAALTGAAI ALFTGTGAITGIVIRTRDARRSLIVGVVALVLGPVGLVAAIWTASLPLFAIAAVIGGV GFGAGFQAGLRLVLAEAPVDQRASLLSSVYVASYLAFGVPSIVAGVFVEADGLPIVLT VYGAFVAASALVALVLQLAGRRTRRAERIADALDAAKA" sig_peptide 2633085..2633165 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /note="Signal peptide predicted for CMS2483 by SignalP 2.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.723 between residues 27 and 28" misc_feature order(2633178..2633246,2633274..2633342,2633376..2633435, 2633448..2633516,2633553..2633621,2633649..2633708, 2633793..2633861,2633889..2633957,2633976..2634044, 2634057..2634125,2634162..2634230,2634240..2634308) /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /note="12 probable transmembrane helices predicted for CMS2483 by TMHMM2.0 at aa 32-54, 64-86, 98-117, 122-144,157-179, 189-208, 237-259, 269-291, 298-320, 325-347,360-382 and 386-408" misc_feature 2633190..2634233 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 2633340..2633390 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /note="PS00216 Sugar transport proteins signature 1." misc_feature 2633385..2633477 /locus_tag="CMS_2483" /old_locus_tag="CMS2483" /note="PS00044 Bacterial regulatory proteins, lysR family signature." gene 2634530..2634700 /locus_tag="CMS_2483A" /old_locus_tag="CMS2483A" /db_xref="GeneID:6158068" CDS 2634530..2634700 /locus_tag="CMS_2483A" /old_locus_tag="CMS2483A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711140.1" /db_xref="GI:170782806" /db_xref="GeneID:6158068" /translation="MAFIVVLLVLWLILTVVGFAIKGLVWLGIIGIILILGTIVLGSL RRRYNAAKTPKA" gene complement(2634697..2635377) /locus_tag="CMS_2484" /old_locus_tag="CMS2484" /db_xref="GeneID:6158069" CDS complement(2634697..2635377) /locus_tag="CMS_2484" /old_locus_tag="CMS2484" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711141.1" /db_xref="GI:170782807" /db_xref="GeneID:6158069" /translation="MHMTGSTPVDGPAVCELTDVTRAFRGREVVRGLSLRVEAGEMVA LTGRSGCGKSTVLNMIGLLDRPTSGQLALFGAPAPRPGTRGARRLLAERIGYLFQSFA LLDEETADGNLRVAQAWTGGTRHSRAEQRADALATVGLADHARDRVYELSGGEQQRLA VARLALRPRALVLADEPTGSLDPENRASVLDMLEGMRRRGTAVVIVTHDPEVAAACTR VVPLERAR" misc_feature complement(2634703..2635260) /locus_tag="CMS_2484" /old_locus_tag="CMS2484" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.1e-49" misc_feature complement(2634883..2634927) /locus_tag="CMS_2484" /old_locus_tag="CMS2484" /note="PS00211 ABC transporters family signature." misc_feature complement(2635216..2635239) /locus_tag="CMS_2484" /old_locus_tag="CMS2484" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2635377..2637650) /locus_tag="CMS_2485" /old_locus_tag="CMS2485" /db_xref="GeneID:6158070" CDS complement(2635377..2637650) /locus_tag="CMS_2485" /old_locus_tag="CMS2485" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711142.1" /db_xref="GI:170782808" /db_xref="GeneID:6158070" /translation="MTSKLLVALLVILTAVVGGSAVVRADVEDRAARDAVAAGWGSRF AIPVLPEDTDPGIVADALVSAGQETGVSVIRRAEGFSGAGERTTLYVLLADGSGLPGA FPLEAGRFLTPEESRGVTGSVATAAVGDPASVGTIADLGGDDRFLIRPLRAAFDTLTP DGEYRMECRTAEDCRAFVERTAAMIDERAPGAALTADALTATHSGGGSSTGGVEPVTA VIALLVLFVVILILYRQLAQARRTGVLRLHGRGTFEVWFLITARIVLLSVGITGIVAV AATTLVSGSGAALMITVGGAIARLLGGLLVVSFLTCITIRRLRIADALKDRTDTRSLF WTSTALKAAATVVLLITGATTLAQVQVIRHQQELLGSWRQAAGYAVFHPQAGGDDAAI GGGSDLGRLANAVFDLYDEADSRGALYVDDSALGSSDGSAPESAAGGGSAHTASLTVN PNYLVSFPVVGEDSKPVVVEDSDADWVVLVPASMRGQEDGLRRAILDQRHSVAQADRS LLHHADAIDTATQQVRIIWTRPDQHLFAFDPSLGTEDGGRVTDPVVQVMTRGNSVGFD RANMMRGGVADALKVRLDGTTEDTLAELAPTLHRLHLDDTLTHLSTLDDYQAGEVQRL EDDLRLLAITGAVLLVGLLVLTLQSIGLMFDRFSRRVVVRRMFGHGFVRRYAEFLGVL AGVWFLQIAAALAAESSGYAGLGAASAADGSRADAGPAGVLTAAAVVLVIELVVSTTW LVRLERRRTVDILKGAF" sig_peptide complement(2635377..2635451) /locus_tag="CMS_2485" /old_locus_tag="CMS2485" /note="Signal peptide predicted for CMS2485 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.791 between residues 25 and 26" misc_feature complement(order(2635419..2635487,2635560..2635628, 2635689..2635757,2636586..2636654,2636712..2636780, 2636823..2636891,2636952..2637020,2637582..2637638)) /locus_tag="CMS_2485" /old_locus_tag="CMS2485" /note="8 probable transmembrane helices predicted for CMS2485 by TMHMM2.0 at aa 5-23, 211-233, 254-276, 291-313,333-355, 632-654, 675-697 and 722-744" gene complement(2637682..2638002) /locus_tag="CMS_2486" /old_locus_tag="CMS2486" /db_xref="GeneID:6158071" CDS complement(2637682..2638002) /locus_tag="CMS_2486" /old_locus_tag="CMS2486" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711143.1" /db_xref="GI:170782809" /db_xref="GeneID:6158071" /translation="MQGRAYLATAVIAVGIIGASAAPALAENSYRPVDCHCYWDYGTQ TNSVFDKRVYSHYETDVHYHSATVRCPDDSNSDKEYAAAGVRASAEVHCSPFQHGYAY WDNY" sig_peptide complement(2637682..2637759) /locus_tag="CMS_2486" /old_locus_tag="CMS2486" /note="Signal peptide predicted for CMS2486 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.914 between residues 26 and 27" misc_feature complement(2637925..2637984) /locus_tag="CMS_2486" /old_locus_tag="CMS2486" /note="1 probable transmembrane helix predicted for CMS2486 by TMHMM2.0 at aa 7-26" gene complement(2638125..2638541) /gene="moaE" /locus_tag="CMS_2487" /old_locus_tag="CMS2487" /db_xref="GeneID:6158072" CDS complement(2638125..2638541) /gene="moaE" /locus_tag="CMS_2487" /old_locus_tag="CMS2487" /codon_start=1 /transl_table=11 /product="molybdopterin converting factor subunit" /protein_id="YP_001711144.1" /db_xref="GI:170782810" /db_xref="GeneID:6158072" /translation="MLFARIAGGAIRVEDCADAVRADDAGAVVTFEGVVRDHDDGRGV LWLDYSAHPAARQAIRQVALDVSARYPEVRIAVEHRIGRLGIGDVALTCAVSSAHRAD AFAACGLLVDEVKQRVPIWKQQAFDDGTSEWVASLG" misc_feature complement(2638188..2638535) /gene="moaE" /locus_tag="CMS_2487" /old_locus_tag="CMS2487" /inference="protein motif:HMMPfam:PF02391" /note="HMMPfam hit to PF02391, Molybdopterin biosynthesis MoaE, score 5e-36" gene complement(2638553..2639107) /gene="mog" /locus_tag="CMS_2488" /old_locus_tag="CMS2488" /db_xref="GeneID:6158818" CDS complement(2638553..2639107) /gene="mog" /locus_tag="CMS_2488" /old_locus_tag="CMS2488" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein Mog" /protein_id="YP_001711145.1" /db_xref="GI:170782811" /db_xref="GeneID:6158818" /translation="MSAADPRGRAVVIVASTRAAAGEYQDRTGPVIAAWLAERGYRVG APIVRADGPGVAAALAEAVAGGARVILTTGGTGITPTDRTPEATRPLLDLEIPGIMEE ARRIGTAHTPTAVLTRGHAGLARGTFVMNLPGSPGGVRDGLGLLDRILDHVLEQARGA VHPSTDPAAGTARPDAAPDAGARA" misc_feature complement(2638670..2639086) /gene="mog" /locus_tag="CMS_2488" /old_locus_tag="CMS2488" /inference="protein motif:HMMPfam:PF00994" /note="HMMPfam hit to PF00994, Molybdenum cofactor biosynthesis protein, score 8.1e-27" misc_feature complement(2638862..2638903) /gene="mog" /locus_tag="CMS_2488" /old_locus_tag="CMS2488" /note="PS01078 Molybdenum cofactor biosynthesis proteins signature 1." gene complement(2639104..2639646) /gene="moaC" /locus_tag="CMS_2489" /old_locus_tag="CMS2489" /db_xref="GeneID:6158820" CDS complement(2639104..2639646) /gene="moaC" /locus_tag="CMS_2489" /old_locus_tag="CMS2489" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein C" /protein_id="YP_001711146.1" /db_xref="GI:170782812" /db_xref="GeneID:6158820" /translation="MTDPATTDPATTEPATTEPEAAAAAPSLTHLRQDGSAHMVDVTD KAVTKRRAVAQAVLVTRPEVVAAVISGDLPKGEAVGTARIAGIMAAKQTSSLIPLCHP LPIGRIEIDITGDDDRLTVVASVSTTGVTGVEMEALTAASVAALTLYDMVKAVDARAV ITDVLVREKQGGKSGDWARP" misc_feature complement(2639131..2639532) /gene="moaC" /locus_tag="CMS_2489" /old_locus_tag="CMS2489" /inference="protein motif:HMMPfam:PF01967" /note="HMMPfam hit to PF01967, Molybdopterin cofactor biosynthesis protein MoaC, score 1.2e-71" gene complement(2639639..2640931) /gene="moeA" /locus_tag="CMS_2490" /old_locus_tag="CMS2490" /db_xref="GeneID:6158817" CDS complement(2639639..2640931) /gene="moeA" /locus_tag="CMS_2490" /old_locus_tag="CMS2490" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein MoeA" /protein_id="YP_001711147.1" /db_xref="GI:170782813" /db_xref="GeneID:6158817" /translation="MTPDRPADRRRRTVDAHRAAVSALLAPLAELPAEELAVDAAALA ADPHRFADRVLAHDVTSPIDLPPFRNSQMDGYAVRAADLADAGGARPAVLRIAPRIPA GVAPAPLAPGTAAPCMTGAPVPPGADAIVPIEAATPDRFVDEQAADATVSFAEPVDPG AFVRAQGSDLAAGAVLVARGTRLLPAHWGVLASAGVATVAVRRRPVVLLLSTGLELRG RGEELAPGQIHDANSVALAAALADAGVEVRALRVASDDADRVRDAIRDAAGVDLLITT GGVSAGAYEVVRDVLAGGGVEFVSVAVQPGGPQGLGTAEIGGQRIPVVAFPGNPVSAL VSFELFLRPVLRALAGHQRPDRPSRELPLAAPLDSPAAKHQVRRGRLDADGRVVAVGG PGSHLLHAYATATHLVHIPAGVDRLEAGDPVTVWSIDD" misc_feature complement(2639645..2639854) /gene="moeA" /locus_tag="CMS_2490" /old_locus_tag="CMS2490" /inference="protein motif:HMMPfam:PF03454" /note="HMMPfam hit to PF03454, MoeA, C-terminal, domain IV, score 3e-10" misc_feature complement(2639912..2640319) /gene="moeA" /locus_tag="CMS_2490" /old_locus_tag="CMS2490" /inference="protein motif:HMMPfam:PF00994" /note="HMMPfam hit to PF00994, Molybdenum cofactor biosynthesis protein, score 2.4e-39" misc_feature complement(2640347..2640901) /gene="moeA" /locus_tag="CMS_2490" /old_locus_tag="CMS2490" /inference="protein motif:HMMPfam:PF03453" /note="HMMPfam hit to PF03453, MoeA, N-terminal, domain I and II, score 6.4e-52" gene 2641059..2641274 /locus_tag="CMS_2491" /old_locus_tag="CMS2491" /db_xref="GeneID:6158819" CDS 2641059..2641274 /locus_tag="CMS_2491" /old_locus_tag="CMS2491" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711148.1" /db_xref="GI:170782814" /db_xref="GeneID:6158819" /translation="MRMDPHERRAAVRRRVTAAIAAVLLAAAIGVAANTCGADLGLLL LVAAFALLTAGAGLGVSAVGSAADHPR" misc_feature order(2641089..2641157,2641185..2641253) /locus_tag="CMS_2491" /old_locus_tag="CMS2491" /note="2 probable transmembrane helices predicted for CMS2491 by TMHMM2.0 at aa 21-43 and 53-75" misc_feature 2641278..2642106 /note="submitted with no further information" gene 2641329..2642075 /locus_tag="CMS_2492" /old_locus_tag="CMS2492" /db_xref="GeneID:6158073" CDS 2641329..2642075 /locus_tag="CMS_2492" /old_locus_tag="CMS2492" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711149.1" /db_xref="GI:170782815" /db_xref="GeneID:6158073" /translation="MTCHAVCMENLIGIIGVMVAFAISIYSHRQNHPKRELRYAIAPW SPQADTSDGTLMRLLVWSTGRADIPSAQFDSGHPIVFVFSAPVSPQFGVTETAPQWSP AFTSPTEFRIPTRLLRTDFRVQVPFQASEPFLVTVSNPLIDVPILRDLKAEKTTVASQ EHAIQKSRARARVSLLAIASWLTAISFITLIVGAAISGNDETLGAGIGIPGMLAFPIC LALLGVAGFKRMLTRVKIRRRERANQSPVS" misc_feature order(2641359..2641412,2641845..2641913,2641941..2642009) /locus_tag="CMS_2492" /old_locus_tag="CMS2492" /note="3 probable transmembrane helices predicted for CMS2492 by TMHMM2.0 at aa 4-21, 166-188 and 198-220" gene 2642157..2642930 /locus_tag="CMS_2493" /old_locus_tag="CMS2493" /db_xref="GeneID:6158074" CDS 2642157..2642930 /locus_tag="CMS_2493" /old_locus_tag="CMS2493" /codon_start=1 /transl_table=11 /product="putative transferase" /protein_id="YP_001711150.1" /db_xref="GI:170782816" /db_xref="GeneID:6158074" /translation="MTIAALGQTLVDLHTAPELLRVVNVWDAVSAAAIGSLPETRALA TASHSIAATFGYEDGERIPLDLHLDMIGRIVAAVEQPVSADLESGYGDAGETVRRAIG VGVVGANLEDGMRPLADSVRAVEAAVAAAQAEGVPFALNARTDAYVLGGDRDRSDVLA DAVERTRAYMAAGATSVFVPGPLTEDEVRTLVEAVGPQRLTVIGVPGSLSPARFEELG VGRISYGPWTQRVALTALQDTAKDLYAGGALPKGTRPLN" gene complement(2642965..2644092) /locus_tag="CMS_2494" /old_locus_tag="CMS2494" /db_xref="GeneID:6158075" CDS complement(2642965..2644092) /locus_tag="CMS_2494" /old_locus_tag="CMS2494" /codon_start=1 /transl_table=11 /product="putative bile acid:sodium symporter" /protein_id="YP_001711151.1" /db_xref="GI:170782817" /db_xref="GeneID:6158075" /translation="MLSGSGRVGGSGGVGADGGSGGVRADDASSGGGDATRPALTDGV RIPARSLLLFLGAIALGSLVGIASPDTGAALGDGVDPTVLVLVTVLFSELDLSGLRRL RLRGASRVLGAAWLANFVLMPLLGFGIASLFLSGAPLLFAGVVIYFTAPCTDWFLGFT RLAGGDTSLGAVLLPINMVTQLLAYPFLLSALVHTPAVADPLVIAETLVRWCVVPASL ALGIRLAVALLLPRGAGLRIRAVTGRLVPLVIAALIVQIFAANVGTIRDHADAFAALL GAVILFFALGYTLVDRIARALGFAHPQRALLAMTTAARNAPLMLALTTVALPDEPLVA ASIVIGMLIEFPHLAGITWLLTRRRPARVRRIAAREPAPTV" misc_feature complement(order(2643028..2643096,2643109..2643162, 2643223..2643282,2643298..2643366,2643403..2643471, 2643514..2643582,2643616..2643684,2643694..2643762, 2643796..2643849,2643892..2643945)) /locus_tag="CMS_2494" /old_locus_tag="CMS2494" /note="10 probable transmembrane helices predicted for CMS2494 by TMHMM2.0 at aa 50-67, 82-99, 111-133, 137-159,171-193, 208-230, 243-265, 271-290, 311-328 and 333-355" misc_feature complement(2643289..2643846) /locus_tag="CMS_2494" /old_locus_tag="CMS2494" /inference="protein motif:HMMPfam:PF01758" /note="HMMPfam hit to PF01758, Bile acid:sodium symporter,score 0.00011" gene complement(2644086..2645210) /locus_tag="CMS_2495" /old_locus_tag="CMS2495" /db_xref="GeneID:6158076" CDS complement(2644086..2645210) /locus_tag="CMS_2495" /old_locus_tag="CMS2495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711152.1" /db_xref="GI:170782818" /db_xref="GeneID:6158076" /translation="MPSSLPQILDALVIGAGPAGLGTAIALDAVDGLRSGVVERGSVG ETFRRWPERQRFLSPSFTGNGFGATDLNAIHPSTSPAYSLGVDYPSGSEYARYLAGVA RHFPVPLMTGTEVTEVTPGDDGFRVETNRGTVGARTVVWAGGEFHDPAAARFAGGQLA DHSAAAAAWEPRTGRLVVIGGYESGIDIACHHVALGAEVTVVDPKHPWAPGSGSDPSY RLAPRSVQRLAAAVATGRLTLVGDARVVGIRPAGAGHLVQVSGATALDSDSRPVLATG FGPGLGPVSELFARRDDGWPLLTEDDESTVVPGLFLSGPAVRHGDVRFCFVYKYRQRF AHIARVIGERLGADCAGLELWREAGMLTDDLSCCGVECAC" gene 2645254..2646297 /locus_tag="CMS_2496" /old_locus_tag="CMS2496" /db_xref="GeneID:6158077" CDS 2645254..2646297 /locus_tag="CMS_2496" /old_locus_tag="CMS2496" /codon_start=1 /transl_table=11 /product="putative purine phosphorylase" /protein_id="YP_001711153.1" /db_xref="GI:170782819" /db_xref="GeneID:6158077" /translation="MILNKVGCARAACGRPGRDARAGLIDWGDDPKEHDVTDTPAPAT AASVPRAEVGVIGGSGLYSLLDPATSESHRIQTPFGPTSSEVTVGELAGRRVAFLTRH GADHSVAPHLIDYRANIWALASLGVSAIVSSSAVGGVSPDYPPGSLVLTDQLLDRTWG RPDTFFDAGVVQHLSAADPFDPELHARAAAALVELEGGDRADPAGPLRTSGTVVVIQG PRFSTRAESLWFRQAGAHIVNMTQYPEVVLASELNIGTVNLSFVTDADAGLAPLPGEQ GDAVTADLVFARLRDAQPRIVRAIEAVVRAIPDDYRGRPLIDPDAVASVLGRPVTGAT GDAGATDPTGARS" misc_feature 2645401..2646180 /locus_tag="CMS_2496" /old_locus_tag="CMS2496" /inference="protein motif:HMMPfam:PF00896" /note="HMMPfam hit to PF00896, Purine phosphorylase,family 2, score 3.1e-74" misc_feature 2645548..2645670 /locus_tag="CMS_2496" /old_locus_tag="CMS2496" /note="PS01240 Purine and other phosphorylases family 2 signature." gene 2646294..2647358 /locus_tag="CMS_2497" /old_locus_tag="CMS2497" /db_xref="GeneID:6158078" CDS 2646294..2647358 /locus_tag="CMS_2497" /old_locus_tag="CMS2497" /codon_start=1 /transl_table=11 /product="putative epimerase/dehydratase" /protein_id="YP_001711154.1" /db_xref="GI:170782820" /db_xref="GeneID:6158078" /translation="MSDGILLVTGGAGFIGGAIVQAALEEGRRVRVLDSLRADVHGGA PEIDPRVELVHGDVTDPDAVARALDGVDVVCHQAAKVGLGVDFLDAPDYVATNDGGTA VLLAAMTRAGIDRLVLASSMVVYGEGAYEGAYGPVRPPARRVADLDAGLFDPVDPATG EPLVPTLIGEDVPLDPRNVYATTKLAQENLASSWTRATGGRAAALRYHNVYGPGMPQN TPYAGVASLFRSALARGEAPRVFEDGRQRRDFVHVRDVAGANLAALVWTAEREAGSFR AFNVGSGTVHTIGEMAEALAREAGGSAPVTTGEYRLGDVRHITASSDRLRAELGWEPR MTFEEGMREFATAPLRSAVA" sig_peptide 2646294..2646359 /locus_tag="CMS_2497" /old_locus_tag="CMS2497" /note="Signal peptide predicted for CMS2497 by SignalP 2.0 HMM (Signal peptide probability 0.696) with cleavage site probability 0.586 between residues 22 and 23" misc_feature 2646306..2646365 /locus_tag="CMS_2497" /old_locus_tag="CMS2497" /note="1 probable transmembrane helix predicted for CMS2497 by TMHMM2.0 at aa 5-24" misc_feature 2646309..2647349 /locus_tag="CMS_2497" /old_locus_tag="CMS2497" /inference="protein motif:HMMPfam:PF01370" /note="HMMPfam hit to PF01370, NAD-dependent epimerase/dehydratase, score 3e-53" gene 2647509..2647958 /locus_tag="CMS_2498" /old_locus_tag="CMS2498" /db_xref="GeneID:6158079" CDS 2647509..2647958 /locus_tag="CMS_2498" /old_locus_tag="CMS2498" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711155.1" /db_xref="GI:170782821" /db_xref="GeneID:6158079" /translation="MTSASPRSVSRRSGLALAVAAASLALAGCSGITDDLADIYAITY EVTTAGPADGGLTDVSYAEASHRGRPSIVKEVGQASLAPGDDSASSVWSVESVVTAED WAFVQATPADGEALTCRILVDGVKEIATSTAAPGQPVSCQVPTAPFG" sig_peptide 2647509..2647619 /locus_tag="CMS_2498" /old_locus_tag="CMS2498" /note="Signal peptide predicted for CMS2498 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.711 between residues 37 and 38" misc_feature 2647563..2647595 /locus_tag="CMS_2498" /old_locus_tag="CMS2498" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2648017..2648874) /gene="lvr" /locus_tag="CMS_2499" /old_locus_tag="CMS2499" /db_xref="GeneID:6158080" CDS complement(2648017..2648874) /gene="lvr" /locus_tag="CMS_2499" /old_locus_tag="CMS2499" /codon_start=1 /transl_table=11 /product="levodione reductase ((6r)-2,2,6-trimethyl-1,4-cyclohexanedione reductase)" /protein_id="YP_001711156.1" /db_xref="GI:170782822" /db_xref="GeneID:6158080" /translation="MRSHGSVAPPTRRGPPPHSSGDPMTTTRFTDKVVLITGGGSGLG RAAAVRLAAEGARLALVDISEGGLADTVAAVTAATPDAEILTVLADVSKESDVDAYVG QTVERFGRIDGFFNNAGIEGRQNLTEDFTAAEFDRVVAINLRGVFLGLEKVLAVMREQ GSGMVVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQFGIRINAIAPGAIWT PMVEASMKQSDADDPRGFAEQFIQGNPTKRYCEAEEIASVVAFLLSDHAAYVNAAVLP IDGGQSAKY" misc_feature complement(2648032..2648775) /gene="lvr" /locus_tag="CMS_2499" /old_locus_tag="CMS2499" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 5.1e-79" gene complement(2648883..2649896) /locus_tag="CMS_2500" /old_locus_tag="CMS2500" /db_xref="GeneID:6158798" CDS complement(2648883..2649896) /locus_tag="CMS_2500" /old_locus_tag="CMS2500" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711157.1" /db_xref="GI:170782823" /db_xref="GeneID:6158798" /translation="MTAAAPHPAPASSARADGIPDPRLDAQTRDPRSWLPAVAAALLG WAALGIALGLAIGIAEAVTRATGADEIVEMALQAVLMSALAVSAVVLLRRRLDRRSLA SLGLSRRIGRPLALGVGVGALTGAVVWVPAGLLGWIRVDDLDLVAFAGFLLLNGIVLA FYEAIPEELAFRGYMWTNLRDGLGLVAATILTTALFPLLSVVIAPVRWIVDVLTGADP DPLSVTPGSGQDPIVFVVQLVLFGLALIAARRIPVEGAVLVAVAFHWTQLTVTRAVLG GMSWTPSFGDVVFVEPDAIVLVLVHIVLGGAVFVAVRKAWEWRTPELRVPRGARVQET DLR" misc_feature complement(order(2648961..2649017,2649075..2649134, 2649153..2649206,2649285..2649353,2649411..2649464, 2649492..2649560,2649621..2649677,2649720..2649788)) /locus_tag="CMS_2500" /old_locus_tag="CMS2500" /note="8 probable transmembrane helices predicted for CMS2500 by TMHMM2.0 at aa 37-59, 74-92, 113-135, 145-162,182-204, 231-248, 255-274 and 294-312" misc_feature complement(2649072..2649437) /locus_tag="CMS_2500" /old_locus_tag="CMS2500" /inference="protein motif:HMMPfam:PF02517" /note="HMMPfam hit to PF02517, Abortive infection protein,score 0.0098" gene complement(2650002..2650469) /locus_tag="CMS_2501" /old_locus_tag="CMS2501" /db_xref="GeneID:6158081" CDS complement(2650002..2650469) /locus_tag="CMS_2501" /old_locus_tag="CMS2501" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711158.1" /db_xref="GI:170782824" /db_xref="GeneID:6158081" /translation="MTIDDRPALSDAQLTARDHVPGLVHHVVLFCLRDDTAPADRDEV ERRFRALADSPHPDGSGPYIRSLHAGRQSSPEGVGRGFELAFVLTFSSEGDRNLYLGE PLIADPSRIDAQHAAFKDFVGPLLAPDPHGVLVFDFIEASSTSGGASAGASAG" gene complement(2650539..2650721) /locus_tag="CMS_2502" /old_locus_tag="CMS2502" /db_xref="GeneID:6158082" CDS complement(2650539..2650721) /locus_tag="CMS_2502" /old_locus_tag="CMS2502" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711159.1" /db_xref="GI:170782825" /db_xref="GeneID:6158082" /translation="MATTVIAWIMTVAGALVTLDALATVVVARRAGRRIARRTWPQLA VGVFGLALGVPLLVTS" misc_feature complement(order(2650545..2650604,2650641..2650709)) /locus_tag="CMS_2502" /old_locus_tag="CMS2502" /note="2 probable transmembrane helices predicted for CMS2502 by TMHMM2.0 at aa 34-56 and 69-88" gene 2650852..2651943 /locus_tag="CMS_2503" /old_locus_tag="CMS2503" /db_xref="GeneID:6158083" CDS 2650852..2651943 /locus_tag="CMS_2503" /old_locus_tag="CMS2503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711160.1" /db_xref="GI:170782826" /db_xref="GeneID:6158083" /translation="MTDPLDAPDAALTRRLRDDPAAAHRLEELRRAAYGRDGSTAPLV EVPADLRARTGYDEARLPAPLVALLVEEARLVDEGAALLAAERPVVAAMEATTAPEAD AEPDADGTPPAPGPSARRRLRPGVLAGAAAGILLVIGIGVASTAGAFDDRTSASPPTS EDVGSAVTATSTPRGQAMGTPDGRRGSVVPDFTADPPVEVPQTEAELAEDLRVRADRA WGLVLEQQPDAVRPDVRMERLVDEAEFIDQQVACLREAGVTASVIGQDSYSLTDADPV AVYACQVRFPQREAGPRTDAELAYIHDYYLSFLLPCYAAEGEPYVGEVPAVDDFIAAV RAERPWTPFPDGMDEQLAAACPVLPAAYR" misc_feature 2651227..2651295 /locus_tag="CMS_2503" /old_locus_tag="CMS2503" /note="1 probable transmembrane helix predicted for CMS2503 by TMHMM2.0 at aa 126-148" gene 2651940..2653031 /locus_tag="CMS_2504" /old_locus_tag="CMS2504" /db_xref="GeneID:6158084" CDS 2651940..2653031 /locus_tag="CMS_2504" /old_locus_tag="CMS2504" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711161.1" /db_xref="GI:170782827" /db_xref="GeneID:6158084" /translation="MNAAASPAEALRRRLRDDPAAARALVDLRQAAYGREDGDAPLVD VPEGIRLDSGLGVDALPAPLVALLVEEHRLVGEGRELLAAEAGAAAPTSGPAVTPPAS DDVVATAGQASDPRARPLVPRRRRLLRPGVFAAVLAGALVVVGLGTASASGLFVDDDS WRSQEPTSTPGPPSTPDPRIGVPVPAFTAEPPARLYASLSDAETAARLQESADSSWEM LLSREPDARRPEVAMERIAEGADRVRQQASCLRDAGVDVRVIGAGDDIRLSSSATPSV TSYACEVRFPMRPQGLITDAALAYLHRYYVDFLLPCYSSEGAAYEGEVPDLADFIARE RSDDPWYPEASSNDGAIAFRCPQAPDAFR" misc_feature 2652333..2652401 /locus_tag="CMS_2504" /old_locus_tag="CMS2504" /note="1 probable transmembrane helix predicted for CMS2504 by TMHMM2.0 at aa 132-154" gene 2653497..2654390 /locus_tag="CMS_2505" /old_locus_tag="CMS2505" /db_xref="GeneID:6158085" CDS 2653497..2654390 /locus_tag="CMS_2505" /old_locus_tag="CMS2505" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711162.1" /db_xref="GI:170782828" /db_xref="GeneID:6158085" /translation="MLPDRIQDLVTLSVSVIVESLPFVILGIVLSIVVQVWVPPGVIE RRLPHNRFARRACISFLGMALPVCECGNVPLARGLVVRGFTVPESITFLLAAPILNPI TIITTHAAFGWDGLILVARLVGGFLIANVVGWLFSLHPEPDRLLTDEFRAECALPDPH AHGGARMRKSISLFGREATTIMPALVIGSLLAGLIQVAVPREVLVTLGGSPILSVLAL MLLAFVVSVCSNVDAFFVLSFGSVFLPGGIVAFLVFGPVIDVKMLALMRTTYSTRTLV MITSVVALISLALGWGVNAIA" misc_feature 2653506..2654381 /locus_tag="CMS_2505" /old_locus_tag="CMS2505" /inference="protein motif:HMMPfam:PF03773" /note="HMMPfam hit to PF03773, Predicted permease, score 2.2e-49" misc_feature order(2653539..2653607,2653764..2653832,2653842..2653910, 2654013..2654081,2654109..2654177,2654196..2654264, 2654307..2654375) /locus_tag="CMS_2505" /old_locus_tag="CMS2505" /note="7 probable transmembrane helices predicted for CMS2505 by TMHMM2.0 at aa 96-118, 138-160, 213-235,239-261, 296-318, 328-350, 357-379 and 394-416" gene 2654497..2655255 /locus_tag="CMS_2506" /old_locus_tag="CMS2506" /db_xref="GeneID:6158086" CDS 2654497..2655255 /locus_tag="CMS_2506" /old_locus_tag="CMS2506" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711163.1" /db_xref="GI:170782829" /db_xref="GeneID:6158086" /translation="MLLAACIVSTLWLTITGQLGLYIHPRYFVFTAIMAVIGLVATVA GFALRPADAAEEHDHDHGSPAPGDPAAARRSSLRARASRVAVAAVVTITVVAVLVLPP RTLTQSTVTQRALNSSSVASDAAPDQELLGTSDFSTLGVKDWSQLLAQTTDPTFFTSK SVDITGFVSADPDDPDDVFYVTRFVVTCCAVDAQPVGVPVYQPGWASTLQTDEWVRVT GPFASNPSAKSRQPLAVMPQGVEPVDQPADPYVY" misc_feature order(2654500..2654568,2654581..2654640,2654746..2654814) /locus_tag="CMS_2506" /old_locus_tag="CMS2506" /note="3 probable transmembrane helices predicted for CMS2506 by TMHMM2.0 at aa 2-24, 29-48 and 84-106" gene 2655263..2656654 /locus_tag="CMS_2507" /old_locus_tag="CMS2507" /db_xref="GeneID:6158087" CDS 2655263..2656654 /locus_tag="CMS_2507" /old_locus_tag="CMS2507" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711164.1" /db_xref="GI:170782830" /db_xref="GeneID:6158087" /translation="MTDVPASPRAFRRAFTAVILVLAIVCGGLLAVAGSQGPRLVRTD VDPLAVVQQSRQRLVLAANRPVQPVDASRIRMEPGADFTVDTQADRIIIDFTRPLAYD ADYTVSIDGVQGVGGGPASDLRTGFRTGDPGMYVLVRGGAQEADRIVRQDVAGNREGA SDVVFEATKIQEYAVVGKSLVVATLQDDGTNGLMIGALDGSGQVDLPLPGRGTLQDLH AEDAGSMVGFRFTSTDGGPYDDTLMVDDVAASAAPTPVVGLDGQPISAQAWGFVPGRP QLVAHGQDGDLYLVTIDGSSPIVPLGRHGTLGPFSADGTRLAVTDPGSTTEIDLRTAQ QTTLPTETGGGDLQYDGAISFVPGDDGAVLRVRTALDPATGTATQRLVVVRDGKASDV YVPADPATRITGLTVTPNGRFALLETVPDPARGASDDYPRNPRDSTVTTLLVELATGT VTRSVAGFEVTIG" sig_peptide 2655263..2655367 /locus_tag="CMS_2507" /old_locus_tag="CMS2507" /note="Signal peptide predicted for CMS2507 by SignalP 2.0 HMM (Signal peptide probability 0.901) with cleavage site probability 0.283 between residues 18 and 19" gene 2656889..2658094 /locus_tag="CMS_2508" /old_locus_tag="CMS2508" /db_xref="GeneID:6158088" CDS 2656889..2658094 /locus_tag="CMS_2508" /old_locus_tag="CMS2508" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="YP_001711165.1" /db_xref="GI:170782831" /db_xref="GeneID:6158088" /translation="MPMRALIAGGGIAGLACGVALRRAGIAATVLERRDAATDEAGSW LQVAGNGMAALEALGLGEVASGLGEPSGRLRTHAADGRTTADMPFGPRPGRGPSARTL MRAELHGILRQEAERQGVDIIRGARVTSAEQDVHGASLVTATGERHSADLVIGADGVR SAVRATILPPDPAAAPAAPTMVDIVGSAAAASLPEEYAAPAGTLQFRFGRDCFVATVA LRDGSTWWFANPRLSALPGGAASAAHLSPDEWAEAVVRLAAPDALPVEHLVAEAPRLV ARLSARAAPQARWGSGRCVLVGDAAHTMPSTSGQGASLALEDAVVLGRIIGSTSSPTD VVASLARRRDERVARIIAQGTLLDRSKLLGPVGSLLRDRVVLPLAARDAARTGSGPSS WMYEFTDEG" misc_feature 2657333..2657953 /locus_tag="CMS_2508" /old_locus_tag="CMS2508" /inference="protein motif:HMMPfam:PF01360" /note="HMMPfam hit to PF01360, Flavoprotein monooxygenase,score 5.1e-17" gene complement(2658174..2658344) /locus_tag="CMS_2509A" /old_locus_tag="CMS2509A" /db_xref="GeneID:6158089" CDS complement(2658174..2658344) /locus_tag="CMS_2509A" /old_locus_tag="CMS2509A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711166.1" /db_xref="GI:170782832" /db_xref="GeneID:6158089" /translation="MSGPQSLAMEGDDAVLEGTTVEVGPDAASLLTSTFGTTAVTDQL VDGIAEIAVSIE" gene 2658483..2658821 /locus_tag="CMS_2509" /old_locus_tag="CMS2509" /db_xref="GeneID:6158091" CDS 2658483..2658821 /locus_tag="CMS_2509" /old_locus_tag="CMS2509" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711167.1" /db_xref="GI:170782833" /db_xref="GeneID:6158091" /translation="MTVHWTPRVVGRVNDQYVEVAKPRGELTWHAHDAEDEMFLVVSG RLRLQLRDDQEVAVGPGQFHVVPRGVLHNPVADEEVEIVLIETVTTAHTGDVVMPGTV PVERQVGDFR" misc_feature 2658483..2658776 /locus_tag="CMS_2509" /old_locus_tag="CMS2509" /inference="protein motif:HMMPfam:PF00190" /note="HMMPfam hit to PF00190, Cupin, score 0.0032" gene complement(2658947..2659633) /locus_tag="CMS_2510" /old_locus_tag="CMS2510" /db_xref="GeneID:6158090" CDS complement(2658947..2659633) /locus_tag="CMS_2510" /old_locus_tag="CMS2510" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711168.1" /db_xref="GI:170782834" /db_xref="GeneID:6158090" /translation="MRNLTKSVFGLATAGFLVVGLAACSTPAETPSSSSKPAATATTE ANPTPLATIPKLTGVDTKVTLDSGFTGALTTLGLTPGVIGTATLDGSTGTLAFPITGG NVKYFDPQQSYRPYVQGEIDHAGSGISLTAGSTVVKLTDFVIDPGTSRLTGSVQVGDG EVMKDVYIFNLDGTTLKPLAMEGDNAVLEGTTVKVSPDAASLLNSTFGTTAVTDQLVV GIAKITVNTK" sig_peptide complement(2658947..2659081) /locus_tag="CMS_2510" /old_locus_tag="CMS2510" /note="Signal peptide predicted for CMS2510 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.438 between residues 45 and 46" misc_feature complement(2659547..2659615) /locus_tag="CMS_2510" /old_locus_tag="CMS2510" /note="1 probable transmembrane helix predicted for CMS2510 by TMHMM2.0 at aa 7-29" misc_feature complement(2659562..2659594) /locus_tag="CMS_2510" /old_locus_tag="CMS2510" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2659899..2660582 /locus_tag="CMS_2511" /old_locus_tag="CMS2511" /db_xref="GeneID:6158092" CDS 2659899..2660582 /locus_tag="CMS_2511" /old_locus_tag="CMS2511" /codon_start=1 /transl_table=11 /product="PadR family transcriptional regulator" /protein_id="YP_001711169.1" /db_xref="GI:170782835" /db_xref="GeneID:6158092" /translation="MRTHDHDDHFSSPSSDGVPVDRHEPCMQHHRGSRPRIMPGHPLA RGFRPGDGPGFPGFPGFPGMGGFGGPGFGPGRGRGGRGRARRGDVRLAILSLLADAPS NGYGLITGIATKTEGAWRPSPGSVYPTLQQLVDEDLIVADESGAKSVYSLTDQGRAHV EEHRAEIDAAWAATTDKTEGEDAFQTSLMKLMGVVKPLMHDATDAQRQAAAEKLDETR RALYAILAD" misc_feature 2660145..2660387 /locus_tag="CMS_2511" /old_locus_tag="CMS2511" /inference="protein motif:HMMPfam:PF03551" /note="HMMPfam hit to PF03551, Transcriptional regulator PadR-like, score 1.1e-21" gene complement(2660674..2660973) /locus_tag="CMS_2512" /old_locus_tag="CMS2512" /db_xref="GeneID:6158093" CDS complement(2660674..2660973) /locus_tag="CMS_2512" /old_locus_tag="CMS2512" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711170.1" /db_xref="GI:170782836" /db_xref="GeneID:6158093" /translation="MHGASAPHRPAKESTVSDIENPRDPADRDLDDTGVDEEELVGAD AREAQEAIDAERVVPLDDDPVDDDDADGGLGIDITESDGPDLEAGDDLDTGAAIR" gene complement(2661045..2662620) /locus_tag="CMS_2513" /old_locus_tag="CMS2513" /pseudo /db_xref="GeneID:6158094" misc_feature complement(2661046..2661402) /locus_tag="CMS_2513" /old_locus_tag="CMS2513" /inference="protein motif:HMMPfam:PF03404" /note="HMMPfam hit to PF03404, Mo-co oxidoreductase dimerisation domain, score 3.9e-11" /pseudo misc_feature complement(2661406..2661981) /locus_tag="CMS_2513" /old_locus_tag="CMS2513" /inference="protein motif:HMMPfam:PF00174" /note="HMMPfam hit to PF00174, Oxidoreductase,molybdopterin binding, score 1.1e-12" /pseudo gene complement(2662659..2663921) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /db_xref="GeneID:6158095" CDS complement(2662659..2663921) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001711171.1" /db_xref="GI:170782837" /db_xref="GeneID:6158095" /translation="MTADSFLIVVLTALVCAAVVGLGASVLLRALRRRSLVLQICVVA LAAVLSVVGGMVAVTASMLVDDAGLTAFLSVAAVSALVSLVMAAMLGMTLVRGSRELG RYAASMGEEAAVEPGRPTSTEFAQLARELSAANRRLADARDRMEAQERSRRELIAWMS HDLRTPLAGIRAMAESLEDGMVDDEHRYFRQIRVQANRLNGMVDDLFELSRINSGSLE LAVERVSLYDIVSDTVAELGPVAQARKVDLRGETAHDDLVVQGDPRELSRVVGNLVMN AIQQSLPGGRIVISAHRDSGNLAVLSVEDTAGGIPEADLPRVFDAGWRSTGSRTPRAY GKSAAEKTALGPDFPVAPVEATPPDPQVQAEGTHDGGYASGGGGAGLGLAIVRGIVRA HDGDVTVQNIDGGCRFDVILPYSKPVAS" sig_peptide complement(2662659..2662730) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /note="Signal peptide predicted for CMS2514 by SignalP 2.0 HMM (Signal peptide probability 0.951) with cleavage site probability 0.367 between residues 24 and 25" misc_feature complement(2662677..2663141) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 1.2e-28" misc_feature complement(2663277..2663471) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 3.3e-20" misc_feature complement(2663502..2663708) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 0.029" misc_feature complement(order(2663640..2663708,2663751..2663819, 2663838..2663906)) /locus_tag="CMS_2514" /old_locus_tag="CMS2514" /note="3 probable transmembrane helices predicted for CMS2514 by TMHMM2.0 at aa 6-28, 35-57 and 72-94" gene complement(2663918..2664676) /locus_tag="CMS_2515" /old_locus_tag="CMS2515" /db_xref="GeneID:6158096" CDS complement(2663918..2664676) /locus_tag="CMS_2515" /old_locus_tag="CMS2515" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001711172.1" /db_xref="GI:170782838" /db_xref="GeneID:6158096" /translation="MVEDDPTVNEVVCRYLKASGFQVETVADGLEAVRVATERMPDLV VLDRMLPGLDGLEVCRRIRAHHPESPVPVVMLTALGQGEDRVNGLDAGADDYLAKPFS PRELVLRVRAVLRRTVPEAVPEPPFVAGPFVLDLGAREIHQAGVMLSLTSREFDLLAF LLRNPRRVFGRDDLLRSVWGWEIGDLSTVTVHVRRLREKIEADPAHPVLLGTVWGVGY RFDPDAAAPAPSAAATPDADAEAVDPAPSAGADA" misc_feature complement(2664017..2664244) /locus_tag="CMS_2515" /old_locus_tag="CMS2515" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 4e-23" misc_feature complement(2664323..2664673) /locus_tag="CMS_2515" /old_locus_tag="CMS2515" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 6.2e-41" gene 2664920..2665627 /locus_tag="CMS_2516" /old_locus_tag="CMS2516" /db_xref="GeneID:6158097" CDS 2664920..2665627 /locus_tag="CMS_2516" /old_locus_tag="CMS2516" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711173.1" /db_xref="GI:170782839" /db_xref="GeneID:6158097" /translation="MTQPLVDVVLPCLDEEEALPFVLSRLPEGYRAIVVDNGSTDRSA EVAREHGALVVEERRRGFGAAAHAGLEAATAPLVAFCDADASMDPALLPRVVDPVRDG ERDLVLGRRIPSTRGAWPLHARIANLELARRLRRITGVPLHDLGPMRCGRRTELLGLG ILDRRSGYPLEMLLRASAAGWSILEVEMPYAPRVGRSKVTGTVRGTVTAVRDMSRVLA EARAAAVGADRTPGGSA" misc_feature 2664938..2665390 /locus_tag="CMS_2516" /old_locus_tag="CMS2516" /inference="protein motif:HMMPfam:PF00535" /note="HMMPfam hit to PF00535, Glycosyl transferase,family 2, score 1.1e-22" gene 2665624..2666307 /locus_tag="CMS_2517" /old_locus_tag="CMS2517" /db_xref="GeneID:6158098" CDS 2665624..2666307 /locus_tag="CMS_2517" /old_locus_tag="CMS2517" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711174.1" /db_xref="GI:170782840" /db_xref="GeneID:6158098" /translation="MTTVVVIAKECIPGRVKTRLHPPFTLEEAAELASAALADTLAAV DDAAPERRVLLFDGANPPAEAAGYDVIPQVAGDLDERLAAMYDALDGPVLLVGMDTPQ LTAALLRPVLDSWADGAGGPDAWFGPANDGGFWALGLRDPDGALVRGVPMSRDDTGAV QLSRLIDAGLDVAMLPELTDVDTVADARDAAAAAPAHRFAAVLRTLDTGAGTRAATTA SATSQRDPA" gene 2666304..2666999 /locus_tag="CMS_2518" /old_locus_tag="CMS2518" /db_xref="GeneID:6158099" CDS 2666304..2666999 /locus_tag="CMS_2518" /old_locus_tag="CMS2518" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711175.1" /db_xref="GI:170782841" /db_xref="GeneID:6158099" /translation="MSLAVDHPEDRASARVRTFGSGGGEPYARALRDSGVLFLSLASD DDSAEAMDISRWSADADAVDASLLAGAAGPVLDIGCGPGRMVRAAMDAGLGALGIDVS PTVVEMAAGLGLPVLHRSVFERLPREGGWGTLLLLDGNIGIGGDAAALLARCGDLLDD QGALVVETHPDPARDRTFECTVEDGQGRASDPFPWAQVGRDAVARMAAGAGLDLVQCW ETDGRSFCRLVRA" gene complement(2666948..2667451) /locus_tag="CMS_2519" /old_locus_tag="CMS2519" /db_xref="GeneID:6158100" CDS complement(2666948..2667451) /locus_tag="CMS_2519" /old_locus_tag="CMS2519" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711176.1" /db_xref="GI:170782842" /db_xref="GeneID:6158100" /translation="MMSGTRTPAPGDGARVTRGMVAARIALVAIGVVGLAFGARTLLE TQRTDQVVGVAVFLLLAILVHDAILSPVVFVTGLLLRKAGRRLPPGSLVIVQAGVVVM AVMTLVVVPEIRARAIGNDNPTILIADYAPRLALMWVATAVATAVVAALYARTRRQKD RPSVSQH" misc_feature complement(order(2666993..2667052,2667110..2667178, 2667212..2667280,2667323..2667391)) /locus_tag="CMS_2519" /old_locus_tag="CMS2519" /note="4 probable transmembrane helices predicted for CMS2519 by TMHMM2.0 at aa 21-43, 58-80, 92-114 and 134-153" misc_feature complement(2667011..2667058) /locus_tag="CMS_2519" /old_locus_tag="CMS2519" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(2667448..2668686) /locus_tag="CMS_2520" /old_locus_tag="CMS2520" /db_xref="GeneID:6158101" CDS complement(2667448..2668686) /locus_tag="CMS_2520" /old_locus_tag="CMS2520" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711177.1" /db_xref="GI:170782843" /db_xref="GeneID:6158101" /translation="MRTLMHETRRRLASPARTTRLAVVIGRLLGLAFLVCFATGLYSH FLQDPLPWMRFPTAPVSLYRLSQGIHITAGIACVPLLLAKLWIVFPELLTYPPVTGVV SFLERASIAVFVGASLLEVAMGLLNTFQWVPFPFYFRQTHFALAFVVIGSLAIHIGVK LPAIAGHWRRGQADESPIVEDQSAATAADGTPARAPRGVTGRVLAWIDDTPVTPTPIA RRGFLVAVGASVAAVVGLTAGQSFRILAPLNAFGPRVMGTGPQGLPVNRTAEAAGVTE SAVDPAWALTVSNGSVSRAFTMDDLRGMGLVTATLPISCVEGWSQSATWRGVRLMDLM DQVGADPVARLRVTSLEKSGGFRRTEMGPEYVRDPLTLVALELDGAPLDIQHGYPARM IAPGRPGVLQTKWLSTLEVM" sig_peptide complement(2667448..2667588) /locus_tag="CMS_2520" /old_locus_tag="CMS2520" /note="Signal peptide predicted for CMS2520 by SignalP 2.0 HMM (Signal peptide probability 0.749) with cleavage site probability 0.369 between residues 47 and 48" misc_feature complement(order(2667955..2668023,2668195..2668263, 2668291..2668359,2668420..2668488,2668558..2668626)) /locus_tag="CMS_2520" /old_locus_tag="CMS2520" /note="5 probable transmembrane helices predicted for CMS2520 by TMHMM2.0 at aa 21-43, 67-89, 110-132, 142-164 and 222-244" gene 2668765..2670213 /locus_tag="CMS_2521" /old_locus_tag="CMS2521" /db_xref="GeneID:6158102" CDS 2668765..2670213 /locus_tag="CMS_2521" /old_locus_tag="CMS2521" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711178.1" /db_xref="GI:170782844" /db_xref="GeneID:6158102" /translation="MRTALTAFVLVVMAALTGWSVVAFDLFGDADDEAFFRREGAAPL FWLVVVIWVVFGAAVLLVRKLPARSAAALIILGSVGLGAVAMAGPPNTSTDSARYAWD GIVQNAGESPYRYTPADPELRDLRPDWLYPKTVVGSDGAATCEGKRIIGVREEETHEP MCTALNRPKVPTIYPPMAELFFAGVRAAVPVTAEYWAFQAAGLLMMTAVTLLLVRALR KRGKPVWWAALWAWCPLVASEVVTNSHVDALGALLALAASLLVAGGMRWRGGIALGAA IATKLIPVIAAPALLRKQPWKVITAAVVTFALLYVPYVLSTGIAVLGYLPGYLQEEGY GDGGRFPLVELVVPGQYGLIAVGLILAVTAGLVWWRTDPADPWLGQLVMIGVTLLAVS PRYPWYALLLIPFIAMTGRGEWFAVVAALALRLFAPDEWAWQIALAAALVIVVAGSLV RLGPDGRARLIPAVVRRRLGRERVTAGGPDAG" sig_peptide 2668765..2668854 /locus_tag="CMS_2521" /old_locus_tag="CMS2521" /note="Signal peptide predicted for CMS2521 by SignalP 2.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.637 between residues 30 and 31" misc_feature order(2668777..2668845,2668882..2668950,2668969..2669028, 2669347..2669415,2669434..2669502,2669569..2669637, 2669656..2669724,2669803..2669871,2669890..2669958, 2670055..2670123) /locus_tag="CMS_2521" /old_locus_tag="CMS2521" /note="10 probable transmembrane helices predicted for CMS2521 by TMHMM2.0 at aa 5-27, 40-62, 69-88, 195-217,224-246, 269-291, 298-320, 347-369, 376-398 and 431-453" gene complement(2670214..2671305) /locus_tag="CMS_2522" /old_locus_tag="CMS2522" /db_xref="GeneID:6158103" CDS complement(2670214..2671305) /locus_tag="CMS_2522" /old_locus_tag="CMS2522" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001711179.1" /db_xref="GI:170782845" /db_xref="GeneID:6158103" /translation="MSASACRGTAADGLDAHVVVERPAFRLDVRLRVPAGSATAVVGP NGAGKSTLLRALAGLAPLTAGRVALDGRVLEEPGGGAARIPAEGRGIGVVFQDHLLFP HLSALQNVAFGPRAHGVPRADADDRARALLDRLGIAQLADRRPAALSGGQSQRVALAR ALVLEPALLLLDEPMAALDAGTRLDVRDLLADELRRFGGAAVMVTHDPVDALALTDRI HVLEDGRQVQEGAPAEVAARPATAYVARLVGMNRLTGRDADGQAVVIIAAPADVRLAR GPAPEGIGGGTRDVVTTGTVRRVEGAAGRVRVALRVAEPDAAVTALDPAAVAIEPGTE ITAELDAASFAALRPVAAERLTVRIPRGI" misc_feature complement(2670634..2671200) /locus_tag="CMS_2522" /old_locus_tag="CMS2522" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.5e-64" misc_feature complement(2670820..2670864) /locus_tag="CMS_2522" /old_locus_tag="CMS2522" /note="PS00211 ABC transporters family signature." misc_feature complement(2671156..2671179) /locus_tag="CMS_2522" /old_locus_tag="CMS2522" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2671302..2672081) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /db_xref="GeneID:6158104" CDS complement(2671302..2672081) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711180.1" /db_xref="GI:170782846" /db_xref="GeneID:6158104" /translation="MLLWIPAGVALAFLVLPLAALVVRAPWATLGERLADPGIARALG LSLGSALAATGLSLLLGVPLAFVLSRSAGRPPVVQRILRALVTVPLVLPPVIGGVALL LLLGRRGLIGGPLEALTGITIPFTTPAVVIAETFVAMPFLVLAVEGALRGADRRFEDA AATLGASRWTVLRRVTLPLVAPGIGAGAVLCFARALGEFGATLTFAGSFPGVTQTVPL SAYLALQTDPDAAVVLSLVLLAVSVVVLVSLRDRWASGVHA" sig_peptide complement(2671302..2671376) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /note="Signal peptide predicted for CMS2523 by SignalP 2.0 HMM (Signal peptide probability 0.980) with cleavage site probability 0.413 between residues 25 and 26" misc_feature complement(2671314..2671955) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 7.8e-19" misc_feature complement(order(2671335..2671394,2671491..2671559, 2671644..2671712,2671770..2671838,2671875..2671943, 2672001..2672069)) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /note="6 probable transmembrane helices predicted for CMS2523 by TMHMM2.0 at aa 5-27, 47-69, 82-104, 124-146,175-197 and 230-249" misc_feature complement(2671554..2671619) /locus_tag="CMS_2523" /old_locus_tag="CMS2523" /note="Predicted helix-turn-helix motif with score 1032.000, SD 2.70 at aa 155-176, sequence RRFEDAAATLGASRWTVLRRVT" gene complement(2672155..2672943) /locus_tag="CMS_2524" /old_locus_tag="CMS2524" /db_xref="GeneID:6158105" CDS complement(2672155..2672943) /locus_tag="CMS_2524" /old_locus_tag="CMS2524" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001711181.1" /db_xref="GI:170782847" /db_xref="GeneID:6158105" /translation="MRGARAVVVGALAAGLLAGCSAGGSAPSGVPDPAPDSLAGTLVV QAAASLTGSMDEVARGFEGAHPGVTVTVSYGGSSTLAQQIVQGAPADVFASASDATMT TVVDAGETAADPRVFARNALEIAVPPGNPARIAGLADFADPARTLALCAPEVPCGAAA AQAFREAGVTPQPDSLEQDVRAALTRVELGEVDAAVVYETDVRAAGDRVEGVPLPDEV NVTTDCVVAPLAESASPALAAAFADYVAGDDARSVFTAAGFRAP" gene complement(2672943..2673455) /locus_tag="CMS_2525" /old_locus_tag="CMS2525" /db_xref="GeneID:6158106" CDS complement(2672943..2673455) /locus_tag="CMS_2525" /old_locus_tag="CMS2525" /codon_start=1 /transl_table=11 /product="putative substrate binding transport regulator" /protein_id="YP_001711182.1" /db_xref="GI:170782848" /db_xref="GeneID:6158106" /translation="MTQKRDRTPARAADAEPPVTVAPASGPFRYRVSEAAALIGVSDD TLRRWADAGRLDLVRGEGRLIQVDGVQLAHLATELAADGSLAASGAGRPPASARNRMP GIVTRVVRDGVMAQVEIQAGPFRMVSLISREAADELGLEVGAPAAATVKATNVGVELL APETLTGGRA" misc_feature complement(2672985..2673173) /locus_tag="CMS_2525" /old_locus_tag="CMS2525" /inference="protein motif:HMMPfam:PF03459" /note="HMMPfam hit to PF03459, TOBE, score 5.5e-12" misc_feature complement(2673255..2673365) /locus_tag="CMS_2525" /old_locus_tag="CMS2525" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 0.00011" misc_feature complement(2673303..2673368) /locus_tag="CMS_2525" /old_locus_tag="CMS2525" /note="Predicted helix-turn-helix motif with score 1107.000, SD 2.96 at aa 30-51, sequence YRVSEAAALIGVSDDTLRRWAD" gene 2673549..2674634 /gene="moaA" /locus_tag="CMS_2526" /old_locus_tag="CMS2526" /db_xref="GeneID:6158107" CDS 2673549..2674634 /gene="moaA" /locus_tag="CMS_2526" /old_locus_tag="CMS2526" /note="together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="YP_001711183.1" /db_xref="GI:170782849" /db_xref="GeneID:6158107" /translation="MSTSLGMPAMPRPAAAPGPARPDDPALLDPFGRRATDLRISLTD RCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLRRDL IEIIAACAALPDRPEISLTTNAIGLASRAQALKDAGLDRINVSLDSVHAETFRLITRR PFLDRVLDGIDAAAAAGLTPIKINAVLVRGVNDDQAADLLAWAVAGGHQLRFIEQMPL DADHAWDRDEMITAAEIRARLSERFTLVPDEEPRDGSPAELWRVHSLDGGAGTAMLGR VGVIASVTEPFCADCRRTRLTATGGVRSCLFSHEETDLLAPLRSGASDAEIADLWRGA MWAKPKGHGMDDADFIQPARSMSAIGG" misc_feature 2673666..2674157 /gene="moaA" /locus_tag="CMS_2526" /old_locus_tag="CMS2526" /inference="protein motif:HMMPfam:PF04055" /note="HMMPfam hit to PF04055, Radical SAM, score 1e-41" misc_feature 2673672..2673707 /gene="moaA" /locus_tag="CMS_2526" /old_locus_tag="CMS2526" /note="PS01305 moaA / nifB / pqqE family signature." misc_feature 2674170..2674580 /gene="moaA" /locus_tag="CMS_2526" /old_locus_tag="CMS2526" /inference="protein motif:HMMPfam:PF06463" /note="HMMPfam hit to PF06463, Molybdenum cofactor synthesis C, score 2.2e-47" gene 2674636..2674899 /locus_tag="CMS_2527" /old_locus_tag="CMS2527" /db_xref="GeneID:6158816" CDS 2674636..2674899 /locus_tag="CMS_2527" /old_locus_tag="CMS2527" /codon_start=1 /transl_table=11 /product="putative molybdopterin converting factor" /protein_id="YP_001711184.1" /db_xref="GI:170782850" /db_xref="GeneID:6158816" /translation="MIVPVELFAAAAALGRTTDTLDLPSAAVLGDLMDALGTRAAASE DPANAAAVLARCTYLVEGVATTDRDAPLTAGSAVDVLPPFSGG" misc_feature 2674648..2674896 /locus_tag="CMS_2527" /old_locus_tag="CMS2527" /inference="protein motif:HMMPfam:PF02597" /note="HMMPfam hit to PF02597, ThiamineS, score 0.00015" misc_feature 2675063..2677952 /note="submitted with no further information" gene 2675177..2676751 /locus_tag="CMS_2528" /old_locus_tag="CMS2528" /db_xref="GeneID:6158108" CDS 2675177..2676751 /locus_tag="CMS_2528" /old_locus_tag="CMS2528" /codon_start=1 /transl_table=11 /product="putative lambdoid prophage protein" /protein_id="YP_001711185.1" /db_xref="GI:170782851" /db_xref="GeneID:6158108" /translation="MERLFTWRTLVYAYYYDHQGSRFEIGGVKIAKLDFEYKNDSEHT TPLPTQFTTLDNTYAPLGQDESYYANLLNLFGVKETKRILAAVGDMAVDLRRFEKLRS EPVVFESLMRDITGSTVTGTYARILAGDGQDSFALKYTRPSTNDLAESVILDFAVQPE SFPPTNVHVLVGRNGSGKTTHLRDMALSLLGPSAGESIGTFREHADVLPDIANVVYVS FSAFDNAILPHEDSVDKYEVRYSYVGLVTSAPENETSRTFGTSHSEDHISIESRARDK IVPTRTRAPEELAEEFARSAWVVVREKSRGLWREALETLESDPIFADADVSSLAQLHH EPSFKQFAAHAKIIYGTLSSGHKIVLLTVTRLAQSVTEKSLVLIDEPEGHLHPPLLSA FIRTLSNLMSSRNGIAIVATHSPVVLQEVPRNSAWKIRRVAGVSRANRLKVESFGENI GVLTSSVFGLEVSASGFHKLLLDTAAEVRDFYLVLERFNGQIGGDGRALLLSWFANQG LPVRSFKANRDWPGYE" misc_feature 2675690..2675713 /locus_tag="CMS_2528" /old_locus_tag="CMS2528" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2676751..2677572 /locus_tag="CMS_2529" /old_locus_tag="CMS2529" /db_xref="GeneID:6158109" CDS 2676751..2677572 /locus_tag="CMS_2529" /old_locus_tag="CMS2529" /codon_start=1 /transl_table=11 /product="putative lambdoid prophage protein" /protein_id="YP_001711186.1" /db_xref="GI:170782852" /db_xref="GeneID:6158109" /translation="MRISSAPAVNVASVLDRLSSGVRIDTVHASRSMLIRAEKTYNYY LSQQAATNVPTVNAGISSSTAKSVRWAYKNHLRSRKSAGREIYALLRSLADLCPTCRV RDAVALDHYLPKETYPTYAIQPTNLVPICTSCNDKKWHKQASSIYDQFLHPYFDDLHD DSWLIASAVRGAGRSVTYSVAAQHFSDPILQKRVEFHLEFFGLSLLYASKASTYVGGH IAMLQDAHAKGDPEHVSDFLFTLSSSVQIFGEEPWVAAALAAWAADLEFCDEGWY" gene complement(2678120..2678599) /locus_tag="CMS_2530" /old_locus_tag="CMS2530" /db_xref="GeneID:6158110" CDS complement(2678120..2678599) /locus_tag="CMS_2530" /old_locus_tag="CMS2530" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711187.1" /db_xref="GI:170782853" /db_xref="GeneID:6158110" /translation="MSRITPTLWFGEGIEEAARFYVDLFPGSRILDTSRYPDDFPDPA LRGTALVVDLELDGQPHRLLNGGPGMQATEAVSLSISAADQQEVDRYWDAFADGGTEG RCGWVRDRWGFWWQVVPEAMATTIGGPDPEGAARAMAAMMGMGRLVVAELQAAYDGR" misc_feature complement(2678144..2678449) /locus_tag="CMS_2530" /old_locus_tag="CMS2530" /inference="protein motif:HMMPfam:PF06983" /note="HMMPfam hit to PF06983, 3-demethylubiquinone-9 3-methyltransferase, score 6.7e-44" gene complement(2678709..2679674) /locus_tag="CMS_2531" /old_locus_tag="CMS2531" /db_xref="GeneID:6158111" CDS complement(2678709..2679674) /locus_tag="CMS_2531" /old_locus_tag="CMS2531" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711188.1" /db_xref="GI:170782854" /db_xref="GeneID:6158111" /translation="MTTPAPLPLPTGARVAVVAPAAVIALALGVAAVVLAPTLPGRIA VHFAADGTPDGWGSPWAMLAVALGLAVVAVALAVAALRARDRRTAATVLLVANLVTGI LAAGWIATAASAAVGDGTLPVWWSVVLLGAGATAAGIPVAVLVRAAGPLPAHDVAPLE IPATARVAWRARTGSGWFAGIGAVVVVLGFVAAASASAVDADTAALSGIPLVVAGLAM LALARVDVTVDRRGLRVVSTWTRIPIMRVPLARIESAGWEDVSPGQWGGWGLRVSGRG VAYVTRSGPGLVVRLTGGRARLVTVADADRGAAVLEALLAGRRAA" sig_peptide complement(2678709..2678855) /locus_tag="CMS_2531" /old_locus_tag="CMS2531" /note="Signal peptide predicted for CMS2531 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.520 between residues 49 and 50" misc_feature complement(order(2679009..2679068,2679081..2679149, 2679240..2679308,2679345..2679413,2679432..2679500, 2679558..2679626)) /locus_tag="CMS_2531" /old_locus_tag="CMS2531" /note="6 probable transmembrane helices predicted for CMS2531 by TMHMM2.0 at aa 17-39, 59-81, 88-110, 123-145,176-198 and 203-222" gene complement(2679671..2680021) /locus_tag="CMS_2532" /old_locus_tag="CMS2532" /db_xref="GeneID:6158112" CDS complement(2679671..2680021) /locus_tag="CMS_2532" /old_locus_tag="CMS2532" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001711189.1" /db_xref="GI:170782855" /db_xref="GeneID:6158112" /translation="MLITVDPTAKTSLAEQVATQIRYAIARGEVASGERLPSARDLAA SIDVNMHTVLRAYASLQADGLIELRRGRGATVIRSGNASFDRLRTLVEELREQADTLG VPMDDLFTMIKGAR" misc_feature complement(2679794..2679985) /locus_tag="CMS_2532" /old_locus_tag="CMS2532" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 4e-16" gene complement(2680069..2680980) /locus_tag="CMS_2533" /old_locus_tag="CMS2533" /db_xref="GeneID:6158113" CDS complement(2680069..2680980) /locus_tag="CMS_2533" /old_locus_tag="CMS2533" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001711190.1" /db_xref="GI:170782856" /db_xref="GeneID:6158113" /translation="MNGMPGISEETKRRVLDAAEALAYRPSRFGRGLVTGGDHQLGLV VDDLRNPWSPELAAAVVRIAAARGWNVSLADVGLAADSDRMVEALGAQTDAVIGTLGS RAAEWIARLGSVPVVELDPRGDPLRAAVQLDPSEAIDALADHLEAVGVRHPVVLDAAV AAGPSPRAALLVRAFEARSMEVSVVRASAPTAEAAAVATERVVARPRTADAIVAFNDV CALGVLSACRRAGVDVPGDVRVVGIDGLSLGRLLAPTLTTLAVDLDELARHALDLAVA MIAGELPRSGPEVIRTVRHQLVVRESA" misc_feature complement(2680078..2680869) /locus_tag="CMS_2533" /old_locus_tag="CMS2533" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 0.00023" gene complement(2681079..2683112) /locus_tag="CMS_2534" /old_locus_tag="CMS2534" /db_xref="GeneID:6158114" CDS complement(2681079..2683112) /locus_tag="CMS_2534" /old_locus_tag="CMS2534" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711191.1" /db_xref="GI:170782857" /db_xref="GeneID:6158114" /translation="MTDPTTTTPTAPGWAVLGPGSIARRFLSQLPASERGARLVAAGS SSAERAEAFATEAADHGFADVTGADYDAVLADPAVHAVYISTVHTGHADLVIRALDAG KAVLCEKPLAVNHGTAMALVDAAREAGLPLVEAYMYRFHPQTAALLQLLRDGVIGDVA HVDASFSFRTGSRTGRLYDTATAGGGILDVGGYTVTAVAAVVQAATGIAVAEPLTLEV DGTVGPTGVDEWSVARATYRGVAGKPGITATLRTGVALDEPQALTILGSKGRIHLSDP WTLGDAPTIEVSVVGEEPRTLSFAGAKPYAIEADATTDALAAGLGESAQMTLDETLAT ARTLDRWRAALELRYPFEAEDADIPTVSGRPLRVRDDSPMLYGEIPGVGKRMSRLVMG VDNQPDLAHASAIFDHFVEQGGNAFDTGYIYGGGVLEGRLGKWIRNRGIREDVVVITK GAHTPHCDPESLTSQLLESLERQGTDYADIYLMHRDNPDVPVGEFVDVMDEHQRAGRI RSYGVSNWTPERFDEAQAYAQANGRAGFQALSDHFGLAEAYDVPWAGCVHVTDPASKA WLEERQVPLLPWSSQARGFFTGRARPDDLSDPELVRCYYGDDNFERLRRAEELAAEHG VQATAIALAYVLAQPFPTFPLFGPRTISEVRSSMRGLSVELTPEQVAWLDLRG" misc_feature complement(2681085..2681975) /locus_tag="CMS_2534" /old_locus_tag="CMS2534" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 5.7e-14" misc_feature complement(2682705..2683067) /locus_tag="CMS_2534" /old_locus_tag="CMS2534" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 8.5e-21" gene 2683226..2684335 /locus_tag="CMS_2535" /old_locus_tag="CMS2535" /db_xref="GeneID:6158115" CDS 2683226..2684335 /locus_tag="CMS_2535" /old_locus_tag="CMS2535" /note="GC Frameplot suggests recent fusion of 2 CDSs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711192.1" /db_xref="GI:170782858" /db_xref="GeneID:6158115" /translation="MAIVERKGCQDRSPPSASISATSRPSSRVSSVRSRADQSPTSSP RSARAVAELRSSTRSASGVARTRTARRSSGSGSRITRPRASRRWTCAVIVDLSTPCQS ASTRIRVAPHSARWPRSQVSVDENASPSSASMRRRTSGRDAQRVIARTARSITAPTAA PSLPGSSLTVRSPSPPYSPTVGILKPYRPIRLDRHTARSERKHPMSTPSTDPRAHAVP ATPREVIASYTEYADAQAAVDTLSDREFPVASTQIVGHDVRTVETVTGRVTNSSAAVR GAAGGAWFGLMLGFLFGIFTPGVAWLGVLLVAVGIGALWGALFGFVGHYATRGKRDFA SVQTLTAGRYDVLVDSARAAEASRILFDTTGAPRA" misc_feature order(2684042..2684110,2684123..2684191) /locus_tag="CMS_2535" /old_locus_tag="CMS2535" /note="2 probable transmembrane helices predicted for CMS2535 by TMHMM2.0 at aa 273-295 and 300-322" gene complement(2684388..2684999) /locus_tag="CMS_2536" /old_locus_tag="CMS2536" /db_xref="GeneID:6158116" CDS complement(2684388..2684999) /locus_tag="CMS_2536" /old_locus_tag="CMS2536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711193.1" /db_xref="GI:170782859" /db_xref="GeneID:6158116" /translation="MSAEPVIARSDDLRASELRAAGWIVTARSWGAQLDAADADPARL RALVDRVTASAVLRELAPHDVPAILALDAATLADYPGGPATRHAGLTPDSARVPAAGR RGFGAFDPAGGLLAMTFVDVDPAGRAAETDVTVVDAAHRGRGLGTAVKAASVLALVEA GVAVFRTGGSSENAAIIAAGTALGYRVDEEWLTLEAPRDAPRT" gene 2685171..2686442 /locus_tag="CMS_2537" /old_locus_tag="CMS2537" /db_xref="GeneID:6158117" CDS 2685171..2686442 /locus_tag="CMS_2537" /old_locus_tag="CMS2537" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711194.1" /db_xref="GI:170782860" /db_xref="GeneID:6158117" /translation="MDDDVQLISDGDGLAVIGEPAAVERFLAANELPKGRDLGLERLK PVAGMAAAAVQAGSVVAENHGRWVKLSEKSTALLKQHSAMKGSLPTLERGVIMDGNKI KGIVEFARGPGAYLTNPAILSGAAGIMAQYAMQQAMDEISDYLAVIDAKVDDILRGQK DAVLADMIGVEMVIDEATLIRAQAGRVSDITWSKAQGTTQTLARTQGYALRQLDALAE KLERTTKVDDLVRVTKDAEATVREWLAVIARCFQLQDAVAVLELDRVLDASPEELDEH RLALRVVRQNRLAVIGRTTDRLLERMDAAAGTANAKVLLNPFDSRAIVGSSNRAATGV VQFNGLLGVADERESLEARRWLAAVGDTWDSARDQGAEGVDAARRLGAAAFGRGRAAA DGLSLKLAEGALRRCKGKGDQTTDAPEDDAS" gene complement(2686468..2687655) /locus_tag="CMS_2538" /old_locus_tag="CMS2538" /db_xref="GeneID:6158118" CDS complement(2686468..2687655) /locus_tag="CMS_2538" /old_locus_tag="CMS2538" /codon_start=1 /transl_table=11 /product="putative sulfurylase" /protein_id="YP_001711195.1" /db_xref="GI:170782861" /db_xref="GeneID:6158118" /translation="MGSSLPLVDLDGTHPGGRGLGGHGSGQDAQERRERHSRHLALPG IGMGGQSRIDQARVLVIGAGGLGSPVLQYLAAAGIGTLGIVDDDAVDLSNLQRQTIHG TPDVGRPKTSSAADSVHRTDPGVEVVEHAERLTNDNAIGILSGYDVVVDATDNFATRY LISDAAALVGVPCVWGSVYRWDAQVTVFWDAAPDGRGIDYRDVFPEPPADGAVLSCEE AGVFGAVCGTVGSLMVTEVIKLVTGAGQPLLGRVVVLDALAGTSRTIGVKRAKGRQRV TALADYDLFCGVGAATDGTELDAEEVERILASDERVVLLDVREPDERLVDSIPGHVAV PVRIVTVDPGAVPGEITDRVVVYCASGVRSRAAAAALREAGRDAVSLRGGIKSWRSVA GRA" misc_feature complement(2686483..2686764) /locus_tag="CMS_2538" /old_locus_tag="CMS2538" /inference="protein motif:HMMPfam:PF00581" /note="HMMPfam hit to PF00581, Rhodanese-like, score 0.00012" misc_feature complement(2686801..2687073) /locus_tag="CMS_2538" /old_locus_tag="CMS2538" /inference="protein motif:HMMPfam:PF05237" /note="HMMPfam hit to PF05237, MoeZ/MoeB, score 3.6e-26" misc_feature complement(2687092..2687496) /locus_tag="CMS_2538" /old_locus_tag="CMS2538" /inference="protein motif:HMMPfam:PF00899" /note="HMMPfam hit to PF00899, UBA/THIF-type NAD/FAD binding fold, score 1.4e-53" gene 2687654..2689360 /locus_tag="CMS_2539" /old_locus_tag="CMS2539" /db_xref="GeneID:6158119" CDS 2687654..2689360 /locus_tag="CMS_2539" /old_locus_tag="CMS2539" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711196.1" /db_xref="GI:170782862" /db_xref="GeneID:6158119" /translation="MTDLRTDGGRGPASTGPSVRRPADGPRGGRPHGPLGRFHHRRWG DAWLIGLLGFLLALPLAGAPSVWYDEAATVISATRGWDDLLRELGTVDAVHGLYYAGM KVWFELVGYSPTSLRFPSAVFIGLAAAGVVLLTRTVSTRATGIVAGIVFVVIPRSAWM GTEGRSFALGTLIAVALTIVLVLAARRAGSRWQVQARWWALYGLLAWLGASTFVYLAL LVGAHGVVILWAIASARVGRRSRRPMVVSLLGWALSSIAAGLLSLPLVRVVTEQSGQV GWIDPIGPNTVTQVLSTQLFYQNDVFAVIAWVLALLGLALLVRRGIRLVRARRASTVE PEGGIAEFESAYLHAGWSPTILQLAVVWFAVPTLLLIGASTLMSPLYSPRYMAYTAPA FAMLMAVGILALKWKPLIAAVTAVLVTLSLMQLVHDRTTTVKADSDWAAIARIVSEER AQEAPDTTDAVIFGPVRRHPKATSRIVAYSYPDAFRGMDDILLRTPPGDTDGLWEETY PLADRVDEVEGADVVWLVTSDKQDIRDDVAEALTPRGFAKTDDWHVKNANIERYERVA AG" misc_feature order(2687789..2687857,2688047..2688115,2688152..2688220, 2688278..2688346,2688383..2688451,2688554..2688607, 2688725..2688793,2688806..2688865,2688878..2688931) /locus_tag="CMS_2539" /old_locus_tag="CMS2539" /note="9 probable transmembrane helices predicted for CMS2539 by TMHMM2.0 at aa 46-68, 132-154, 167-189,209-231, 244-266, 301-318, 358-380, 385-404 and 409-426" gene complement(2689379..2690293) /locus_tag="CMS_2540" /old_locus_tag="CMS2540" /db_xref="GeneID:6158120" CDS complement(2689379..2690293) /locus_tag="CMS_2540" /old_locus_tag="CMS2540" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001711197.1" /db_xref="GI:170782863" /db_xref="GeneID:6158120" /translation="MDSCYRPTNHQNKSKGLVMVTVHHRTVSIDGLDVFWREAGPADA PVLLLLHGYPSSSHMFRHLIPALAGRFRVIAPDHVGFGRSSAPSAEDFDYSFAALTEV TRGFLAAIGVTRYAIYVQDYGAPISWRLALADPAAVTGVITQNGNAYEEGFMPSFWDP IWADAAERTDATRDALRPALGRDAVEWQYTHGVPDPTVVDPDAWEHDLALLARPGQDD VQLALFRDYATNRDLYPAVHAWLRESRVPVLAIWGRNDEIFAASGAEAFRRDAPHARI ELVDGGHFLLESDLDRVLAAIGEWHDGL" misc_feature complement(2689397..2690083) /locus_tag="CMS_2540" /old_locus_tag="CMS2540" /inference="protein motif:HMMPfam:PF00561" /note="HMMPfam hit to PF00561, Alpha/beta hydrolase fold,score 4.4e-28" gene 2690326..2690829 /locus_tag="CMS_2541" /old_locus_tag="CMS2541" /db_xref="GeneID:6158121" CDS 2690326..2690829 /locus_tag="CMS_2541" /old_locus_tag="CMS2541" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711198.1" /db_xref="GI:170782864" /db_xref="GeneID:6158121" /translation="MDHDEELLLALLNSAPVVDGHRDDRLAGASGRGLARGWGGTGTA AEVERLRRTRDALHAVIRGGAPATPAVDELAAVVDGVVRTPRVTPDGVTWDLHVPADD RLPVDAVLAWSSVTARLPGRLRPCANAECELFLIDHSRPGTARWCSMATCGNRMKARA HAQRVRD" misc_feature 2690326..2690820 /locus_tag="CMS_2541" /old_locus_tag="CMS2541" /inference="protein motif:HMMPfam:PF07336" /note="HMMPfam hit to PF07336, Protein of unknown function DUF1470, score 6.5e-22" gene 2690883..2691302 /locus_tag="CMS_2542" /old_locus_tag="CMS2542" /db_xref="GeneID:6158122" CDS 2690883..2691302 /locus_tag="CMS_2542" /old_locus_tag="CMS2542" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711199.1" /db_xref="GI:170782865" /db_xref="GeneID:6158122" /translation="MSTFFVAGSWRNREAVGDVVAALDAVGVRSYCFVRAAYDADAAV FAAPGGADDADLDDPGIRRLFEQDLAALRAADRFVLVLPAGAAAHMEAGIAVGLGKPC VAVGAAERTETLHLAFEAMCAGPTGRIRHLRDTGAVG" gene 2691399..2692361 /locus_tag="CMS_2543" /old_locus_tag="CMS2543" /db_xref="GeneID:6158123" CDS 2691399..2692361 /locus_tag="CMS_2543" /old_locus_tag="CMS2543" /note="N/R/C" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001711200.1" /db_xref="GI:170782866" /db_xref="GeneID:6158123" /translation="MTHANAPFTPAGRVRLARLIIEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAG ITVIRVLTDNGSCYRSHAFTEALGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHP YRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature 2691471..2691536 /locus_tag="CMS_2543" /old_locus_tag="CMS2543" /note="Predicted helix-turn-helix motif with score 1316.000, SD 3.67 at aa 25-46, sequence WPVRRAAERFQCSPATASRWAR" misc_feature 2691795..2692337 /locus_tag="CMS_2543" /old_locus_tag="CMS2543" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.9e-42" gene complement(2692358..2692825) /locus_tag="CMS_2544" /old_locus_tag="CMS2544" /db_xref="GeneID:6158124" CDS complement(2692358..2692825) /locus_tag="CMS_2544" /old_locus_tag="CMS2544" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711201.1" /db_xref="GI:170782867" /db_xref="GeneID:6158124" /translation="MRTGRGGLVGETADAVRAWESLFRAQVSVMRRLTAEFPSRELSF NEYDVLFNISRQPEGRLRLRDLNQHVLLTQPSVSRLIDRLVARGLVVKCGDESDGRAT IVRLTDVGDAAFRAVARVHMESIASTVGGALTPDELNTLRALTDKLRGSVAEA" misc_feature complement(2692382..2692702) /locus_tag="CMS_2544" /old_locus_tag="CMS2544" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.2e-17" misc_feature complement(2692580..2692645) /locus_tag="CMS_2544" /old_locus_tag="CMS2544" /note="Predicted helix-turn-helix motif with score 1261.000, SD 3.48 at aa 61-82, sequence LRLRDLNQHVLLTQPSVSRLID" gene complement(2693135..2693743) /locus_tag="CMS_2545" /old_locus_tag="CMS2545" /db_xref="GeneID:6158125" CDS complement(2693135..2693743) /locus_tag="CMS_2545" /old_locus_tag="CMS2545" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711202.1" /db_xref="GI:170782868" /db_xref="GeneID:6158125" /translation="MPEGTEARGFAIYVGLDELKASAAGTDLGTVVAALKRLAAELAP GVETHAAVALAPEGAGGRDIDVVRLALQDPAAVAQHREQPEDDDRVDGGVTVDLSRKR VVLDGETAPLTYKEFELLQYLVLREGRTIERSELISSLWSAADEDDVPNERTIDVHVR RLRSKLGRYEEIVRTVRGAGYRFDRHADVAVHHASTQSPDLF" misc_feature complement(2693195..2693425) /locus_tag="CMS_2545" /old_locus_tag="CMS2545" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 3.8e-19" gene complement(2694305..2694952) /gene="upp" /locus_tag="CMS_2546" /old_locus_tag="CMS2546" /db_xref="GeneID:6158126" CDS complement(2694305..2694952) /gene="upp" /locus_tag="CMS_2546" /old_locus_tag="CMS2546" /EC_number="2.4.2.9" /note="Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="YP_001711203.1" /db_xref="GI:170782869" /db_xref="GeneID:6158126" /translation="MEPMRVHVADHPLITHKLTALRDRTTPSPVFRSLADELVTLLAY EATRDVRVETITVQTPVAPAEGLTLSDPKPLVVPILRAGLGMLDGLMRLMPSAEVGFL GMVRNEETLQPDIYAERLPTDLSNRQCFVVDPMLATGGSLIAAIEYLFDRGAVDVTCI CLIAAPEGLKAVEEATAGREVTIVLGALDEKLDEVGYIIPGLGDAGDRLYGTAAH" misc_feature complement(2694410..2694895) /gene="upp" /locus_tag="CMS_2546" /old_locus_tag="CMS2546" /inference="protein motif:HMMPfam:PF00156" /note="HMMPfam hit to PF00156, Phosphoribosyltransferase,score 8.7e-12" gene 2694976..2695452 /gene="tadA" /locus_tag="CMS_2547" /old_locus_tag="CMS2547" /db_xref="GeneID:6159086" CDS 2694976..2695452 /gene="tadA" /locus_tag="CMS_2547" /old_locus_tag="CMS2547" /EC_number="3.5.4.-" /codon_start=1 /transl_table=11 /product="tRNA-specific adenosine deaminase" /protein_id="YP_001711204.1" /db_xref="GI:170782870" /db_xref="GeneID:6159086" /translation="MDLPVPGDYERWMAVALDEARACAETGDVPVGAVVVDAAGVVIG RGRNLREARQDPTAHAEVEALRAAAEATGDRHLVGATLVVTLEPCVMCAGAILAARVP RVVFGAWDEKAGAAGSLYDVLRDRRLPHRAEVFAGVLAAECAAVLDDFFADRRADA" misc_feature 2694994..2695299 /gene="tadA" /locus_tag="CMS_2547" /old_locus_tag="CMS2547" /inference="protein motif:HMMPfam:PF00383" /note="HMMPfam hit to PF00383, Cytidine/deoxycytidylate deaminase, zinc-binding region, score 4.6e-32" misc_feature 2695150..2695263 /gene="tadA" /locus_tag="CMS_2547" /old_locus_tag="CMS2547" /note="PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature." gene complement(2695941..2696933) /locus_tag="CMS_2549" /old_locus_tag="CMS2549" /db_xref="GeneID:6159004" CDS complement(2695941..2696933) /locus_tag="CMS_2549" /old_locus_tag="CMS2549" /codon_start=1 /transl_table=11 /product="putative cation transport protein" /protein_id="YP_001711205.1" /db_xref="GI:170782871" /db_xref="GeneID:6159004" /translation="MARLRRPGHARPGGPSRLAGRGGPALSESHGSKAIFAALAANVG IAITKFVAAFFSGSSSMLAEGVHSLADSGNQILLLIGGKRAKRMADEEHPFGYGRVRY VYAFIVSIILFSVGGVYSLYEGIHKIEHPEPLDVPWLPIVVLVIAIGLESFSLRTAIT ESNPLRGTQTWVQFVRRAKSPELPVLLLEDTAALSGLVFALLGVTASIITGDGIYDGI GTLLIGVLLVAVAVILGVEMSSLLVGEGASKPDLAAIRAAITSGHEAESIIHMKTLYL GPDELLVAAKIAMPATSSLGDLAAGIDAIERRVREAVPVARVIYLEPDVRVATR" misc_feature complement(2695956..2696831) /locus_tag="CMS_2549" /old_locus_tag="CMS2549" /inference="protein motif:HMMPfam:PF01545" /note="HMMPfam hit to PF01545, Cation efflux protein,score 1.6e-63" misc_feature complement(order(2696226..2696285,2696304..2696363, 2696454..2696522,2696559..2696627,2696763..2696831)) /locus_tag="CMS_2549" /old_locus_tag="CMS2549" /note="5 probable transmembrane helices predicted for CMS2549 by TMHMM2.0 at aa 35-57, 103-125, 138-160, 191-210 and 217-236" gene 2697059..2697880 /gene="proC" /locus_tag="CMS_2550" /old_locus_tag="CMS2550" /db_xref="GeneID:6158127" misc_feature 2697059..2697823 /gene="proC" /locus_tag="CMS_2550" /old_locus_tag="CMS2550" /inference="protein motif:HMMPfam:PF01089" /note="HMMPfam hit to PF01089, Delta 1-pyrroline-5-carboxylate reductase, score 6.8e-70" CDS 2697071..2697880 /gene="proC" /locus_tag="CMS_2550" /old_locus_tag="CMS2550" /EC_number="1.5.1.2" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="YP_001711206.1" /db_xref="GI:170782872" /db_xref="GeneID:6158127" /translation="MLGTGSMNGAILGGLLQPGVEVDGDVRVTTRSAASAAALGERDG VAAASVEEDADANRRAVRGARVVIVGVKPHMVPDLLREIADDLDAGALVISVAAGVTI ATFESLLPDHVAVLRSMPNTPSLVGRGVTGLAAGTRSTQEDRALARAVFATVGDVVEV PEERIDALSTISGSGPAYVFLLIEELTRTAEAKGFSPDEARVLVQGTFRGAVELLAAS DVDPAELRRRVTSPKGTTERAVEVLQAAGLSGLFDRATDAALARARELAAG" gene complement(2697929..2698597) /locus_tag="CMS_2551" /old_locus_tag="CMS2551" /db_xref="GeneID:6158884" CDS complement(2697929..2698597) /locus_tag="CMS_2551" /old_locus_tag="CMS2551" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711207.1" /db_xref="GI:170782873" /db_xref="GeneID:6158884" /translation="MGERIPHNAPVLVIGLGRFGAATAGQLARLDREVLAIDASEGLV QKWSDRVTHAVQADARNIEALQQLGAKDFSIAVVAVGSSIEASVLITANLVDLKIPQI WAKAISQSHGKILERIGANHVIYPEAEAGERVAHLVSGRMLDFIEFDDDFVLAKMYPP KPIRGMTLLESAVRRRYRITVVGVKTPGKPFTYATSETLVSNHDLIIVSGTSADIEKF ASLS" misc_feature complement(2698220..2698570) /locus_tag="CMS_2551" /old_locus_tag="CMS2551" /inference="protein motif:HMMPfam:PF02254" /note="HMMPfam hit to PF02254, TrkA-N, score 2.9e-30" gene complement(2698651..2700075) /locus_tag="CMS_2552" /old_locus_tag="CMS2552" /db_xref="GeneID:6158128" CDS complement(2698651..2700075) /locus_tag="CMS_2552" /old_locus_tag="CMS2552" /codon_start=1 /transl_table=11 /product="putative cation transport protein" /protein_id="YP_001711208.1" /db_xref="GI:170782874" /db_xref="GeneID:6158128" /translation="MRVRPDHGRPLLGRIRDFLDYFAHSTPARFAILIFAALVLTLTT ILMLPGMTSTGDTAPFADALFTAVSAICVTGLATVDMATYWTPLGHAFIALGVQIGGI GVLTLASIMGLIVSRRLGLKARLMAASDSNPLRIHHGPVAEGQAVKLGEIGTLLLTVA ISALVIELSIAALLFPRILLEGIPVGQAALDSFYYSLMAFTNTGFVFSEAGFELYHQD YWFLSLLMIGVFLGSIGFPVIYAVYRGWRKPRRFSVHVKLTLWTSLILIVLGTLAYVV LEWDNTKTFALMDPVQHGFQALFLSVMTRSGGFSTLDMADFGNASLLVTDMLMFIGGG SASTAGGIKVTTLAILFLAAFAEARGSESMEVFERRIPSDVLRLAVSIVLWGATTVAL SSIVLLQISGERLDYVLFDAISAFATSGLSTGFTAEASDPAKYVLAATMFLGRVGTVT LAAALAASTRRQLFQRSEERPIVG" sig_peptide complement(2698651..2698815) /locus_tag="CMS_2552" /old_locus_tag="CMS2552" /note="Signal peptide predicted for CMS2552 by SignalP 2.0 HMM (Signal peptide probability 0.969) with cleavage site probability 0.791 between residues 55 and 56" misc_feature complement(2698696..2699640) /locus_tag="CMS_2552" /old_locus_tag="CMS2552" /inference="protein motif:HMMPfam:PF02386" /note="HMMPfam hit to PF02386, Cation transporter, score 2.4e-42" misc_feature complement(order(2698705..2698773,2698876..2698944, 2699002..2699070,2699248..2699316,2699350..2699418, 2699554..2699622,2699728..2699796,2699839..2699907, 2699926..2699994)) /locus_tag="CMS_2552" /old_locus_tag="CMS2552" /note="9 probable transmembrane helices predicted for CMS2552 by TMHMM2.0 at aa 28-50, 57-79, 94-116, 152-174,220-242, 254-276, 336-358, 378-400 and 435-457" gene 2700155..2700700 /locus_tag="CMS_2553" /old_locus_tag="CMS2553" /db_xref="GeneID:6158129" CDS 2700155..2700700 /locus_tag="CMS_2553" /old_locus_tag="CMS2553" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_001711209.1" /db_xref="GI:170782875" /db_xref="GeneID:6158129" /translation="MADIFDVVADPTRRDLLRVLLDRRAVPEAPTGEISVSELVQTLG ISQPTVSKHLRVLRDSDLVSVREEGQHRYYRLESAPLEALDAWVAPFVDDDQDEASDD GHADPDTGLLGGGLSADPDGDDDGDPAGYPFAASLGRIWADTRYQAAAAVHDATRVAG SAGQAGLGRLRGRKPGNSRDA" misc_feature 2700167..2700427 /locus_tag="CMS_2553" /old_locus_tag="CMS2553" /inference="protein motif:HMMPfam:PF01022" /note="HMMPfam hit to PF01022, Bacterial regulatory protein, ArsR, score 2.6e-20" misc_feature 2700254..2700319 /locus_tag="CMS_2553" /old_locus_tag="CMS2553" /note="Predicted helix-turn-helix motif with score 1858.000, SD 5.52 at aa 61-82, sequence ISVSELVQTLGISQPTVSKHLR" gene 2700823..2701062 /gene="xis" /locus_tag="CMS_2554" /old_locus_tag="CMS2554" /db_xref="GeneID:6158130" CDS 2700823..2701062 /gene="xis" /locus_tag="CMS_2554" /old_locus_tag="CMS2554" /codon_start=1 /transl_table=11 /product="putative excisionase" /protein_id="YP_001711210.1" /db_xref="GI:170782876" /db_xref="GeneID:6158130" /translation="MSRDLSDVRFLTVAEVAEMMRVSKMTVYRLVHSGDLPAIRFGRS FRVPESAVLAAIDPSNAVPGQPGEASRHSGMSDVG" misc_feature 2700853..2700918 /gene="xis" /locus_tag="CMS_2554" /old_locus_tag="CMS2554" /note="Predicted helix-turn-helix motif with score 1732.000, SD 5.09 at aa 11-32, sequence LTVAEVAEMMRVSKMTVYRLVH" gene 2701137..2701235 /locus_tag="CMS_2555" /old_locus_tag="CMS2555" /db_xref="GeneID:6159099" CDS 2701137..2701235 /locus_tag="CMS_2555" /old_locus_tag="CMS2555" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711211.1" /db_xref="GI:170782877" /db_xref="GeneID:6159099" /translation="MGSVIKKRRKRMAKKKHRKLLRKTRHQRRNKK" gene complement(2701354..2702106) /locus_tag="CMS_2556" /old_locus_tag="CMS2556" /db_xref="GeneID:6158131" CDS complement(2701354..2702106) /locus_tag="CMS_2556" /old_locus_tag="CMS2556" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001711212.1" /db_xref="GI:170782878" /db_xref="GeneID:6158131" /translation="MVEQAGTPILAFFDVDNTLIHGASAFHLVRGLRSAGLLTVRDIV GSGWKHARFKARGENDRHLASARARGLEVVTGVTVADMAVLADDIYEQHTAPMVWPET LGLAREHLAKGHQVWLVTASPSFLADVIARRLGLTGALGTVLQVRDGAYTGRLEGEFL HGAHKAAAARGLLARTGADAAECWAYSDSRHDIPLLSLVGRPVVVNPDRALAAHARGS GWPSMRLWRQSIRDARRRVRREAAQADGPARN" misc_feature complement(2701480..2702085) /locus_tag="CMS_2556" /old_locus_tag="CMS2556" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 0.00021" gene 2702141..2702458 /locus_tag="CMS_2557" /old_locus_tag="CMS2557" /db_xref="GeneID:6158132" CDS 2702141..2702458 /locus_tag="CMS_2557" /old_locus_tag="CMS2557" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711213.1" /db_xref="GI:170782879" /db_xref="GeneID:6158132" /translation="MAGRAAGGAIRGLAYAGRMSATVLTLVGKPGCHLCDDARGVVTQ VLEGLDATRAAEVTLEERSILDDPALADRFAEEIPVLLIDGRVHNYWRIDAERLRQAL VER" gene 2702493..2702795 /locus_tag="CMS_2558" /old_locus_tag="CMS2558" /db_xref="GeneID:6158133" CDS 2702493..2702795 /locus_tag="CMS_2558" /old_locus_tag="CMS2558" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711214.1" /db_xref="GI:170782880" /db_xref="GeneID:6158133" /translation="MTLRHVVSWKLADRDPAAIDRDAARIAEVLGTLPGLVPGIRSFQ VGRDVVGSARSHDVVLIADFDDRAALDAYDVHPEHQRVAAVVRGLVGSAASVDFEV" gene 2702839..2703480 /locus_tag="CMS_2559" /old_locus_tag="CMS2559" /db_xref="GeneID:6158134" CDS 2702839..2703480 /locus_tag="CMS_2559" /old_locus_tag="CMS2559" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711215.1" /db_xref="GI:170782881" /db_xref="GeneID:6158134" /translation="MGDAVEVERVSVVVDGIPLLHPTDLTAAPGEALAVTGPNGAGKT TLLRVVAGLTRPSTGTARVQGRPVDERDAALRRAVSGSIGHPPVARDLTLAEHLAVIA ATWGMDASAARDRAAVHLERWRLAPLARRFPHELSSGQSQLAALAMATVRPYDVLLLD EPEQRLDPDRLQLAIGILRAELEDGRALVLATHSPTLREAVAHRSIALVGDAA" misc_feature 2702926..2703471 /locus_tag="CMS_2559" /old_locus_tag="CMS2559" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.9e-31" misc_feature 2702947..2702970 /locus_tag="CMS_2559" /old_locus_tag="CMS2559" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2703244..2703288 /locus_tag="CMS_2559" /old_locus_tag="CMS2559" /note="PS00211 ABC transporters family signature." gene 2703477..2705003 /locus_tag="CMS_2560" /old_locus_tag="CMS2560" /db_xref="GeneID:6158135" CDS 2703477..2705003 /locus_tag="CMS_2560" /old_locus_tag="CMS2560" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711216.1" /db_xref="GI:170782882" /db_xref="GeneID:6158135" /translation="MSTRRVLRTVRALRRERGGATPMDLAYVLYAGALTVLIVGVPVL RAIVLELAEPDAAAALRDLGPQASAAVVGLAATTLVMAGGARGPALLSPFLTAALAGS GLARRSVLARPFARAALGSSALAGLVALLPALALLVAGDADPWPVAVWTAGGAPVGVI LAGCWLAGQRLGPGGRAVGGAVLLGSTVVAVLVPAAITPWSAVRVLFPARGAWPPAPD AALALGVLGGLTLAVVALAPVLLGGLRGPELLAQAQRWQAATTLATTGDLAMAVGGFR PLPRIGRGWGAVRGGSPAALVAWRDLVGAARTPVRAASACLGVAASGALLAVSLDGAG AGLVIPALGAVLVGFLALGVGADGFRHVVDVASAPPLYGIPTGRLLLLHATLPAAAGV ACALVGAGIAVAGGAGAAALVVAPAVTLLLVVVRALDAAKGPLPLEVMAPVITPAGDA SALVIAAWQADALLLAGGSVLAVVSAAATVGPVAAALVLPLGAGVASRVRHRIQAVRD" misc_feature order(2703555..2703623,2703723..2703791,2703828..2703896, 2703909..2703977,2704014..2704082,2704140..2704208, 2704398..2704466,2704476..2704544,2704611..2704679, 2704692..2704760,2704779..2704847,2704890..2704958) /locus_tag="CMS_2560" /old_locus_tag="CMS2560" /note="12 probable transmembrane helices predicted for CMS2560 by TMHMM2.0 at aa 27-49, 83-105, 118-140, 145-167,180-202, 222-244, 308-330, 334-356, 379-401, 406-428,435-457 and 472-494" gene complement(2705030..2705245) /locus_tag="CMS_2561" /old_locus_tag="CMS2561" /db_xref="GeneID:6158136" CDS complement(2705030..2705245) /locus_tag="CMS_2561" /old_locus_tag="CMS2561" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711217.1" /db_xref="GI:170782883" /db_xref="GeneID:6158136" /translation="MALTNLPYDDEAILGAAESANAISREVRDVQVDFTGTGVGEDGV ARITATISWTVPADEAVRILEQAMPRG" gene complement(2705322..2706374) /locus_tag="CMS_2562" /old_locus_tag="CMS2562" /db_xref="GeneID:6158137" CDS complement(2705322..2706374) /locus_tag="CMS_2562" /old_locus_tag="CMS2562" /note="Recent fusion suggested by GC Frameplot" /codon_start=1 /transl_table=11 /product="fusion protein" /protein_id="YP_001711218.1" /db_xref="GI:170782884" /db_xref="GeneID:6158137" /translation="MADASPPALLLVNGTYGVGKSAVLDHLGELLAEAGRPFSLMDVD WFHRSWPPASWDPENIVVEARAMAATWALFQEAGPRQLVISGVAAERADLDRYRDALG IDVRSVLLTASPTVVEARLRSRYDDDRSAARDWHLARHAQLAARLRESGLDETTIPTD DRPPPAGGAGGARRVRRRRPLGIRGRRDPRPPENCFLCCRNIGPITRCPHPRAAEPST PRDPQDPRRRRDLRTGHGGGQGMGQLIFDSTTRTTIDDRALAHLQIVMINKLRRRESF AFSWKYPASEGDGRSTVWVAPELPLHFRFSGSRVPAINPAWVEVLMESANTGSGLHLI PEPPPGSSPHPEPRAD" misc_feature complement(2706312..2706335) /locus_tag="CMS_2562" /old_locus_tag="CMS2562" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2706367..2707596) /locus_tag="CMS_2563" /old_locus_tag="CMS2563" /db_xref="GeneID:6158138" CDS complement(2706367..2707596) /locus_tag="CMS_2563" /old_locus_tag="CMS2563" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711219.1" /db_xref="GI:170782885" /db_xref="GeneID:6158138" /translation="MPHETRHDRSLAPGIARHGRLRKPSAVRTAVLAVVVVAAVAVVS TGSVAAVAAWDLARTVQANAVDIGDGKAAPPSIGGIDGGANILLVGGDTREGQGDGYG TGKDVQTGNLNDVTMLLHISEDHTRATVVSFPRDMLVDMPACTRPDASEEPASSDEQI NVALKRGGLPCVVRTVEAITGLEVPYGGVIQFNGVLAMSNAVGGVPVCVAKRIYDPKT DLDLQPGVHPLQGREAVQFLRTRHGVGDGSDIDRISNQQVFLSALLRTITSTDTLTNP AKLYGIARAAVDNMVLSTSLDTPSAITSLALTAKDIPLDRFTFVQYPSIRLESQRVAQ DVVKGDEMIRLIAADADFSLAPGSTGQGVAAPEPAAGETPAPDAGSTPSAEPSAPAVL PSGVTGQTAAEETCSNG" sig_peptide complement(2706445..2706516) /locus_tag="CMS_2563" /old_locus_tag="CMS2563" /note="Signal peptide predicted for CMS2563 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.412 between residues 24 and 25" misc_feature complement(2706790..2707263) /locus_tag="CMS_2563" /old_locus_tag="CMS2563" /inference="protein motif:HMMPfam:PF03816" /note="HMMPfam hit to PF03816, Cell envelope-related transcriptional attenuator, score 6.1e-47" misc_feature complement(2707438..2707506) /locus_tag="CMS_2563" /old_locus_tag="CMS2563" /note="1 probable transmembrane helix predicted for CMS2563 by TMHMM2.0 at aa 5-27" gene complement(2707781..2709097) /gene="aspS" /locus_tag="CMS_2564" /old_locus_tag="CMS2564" /db_xref="GeneID:6158139" CDS complement(2707781..2709097) /gene="aspS" /locus_tag="CMS_2564" /old_locus_tag="CMS2564" /EC_number="6.1.1.12" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /protein_id="YP_001711220.1" /db_xref="GI:170782886" /db_xref="GeneID:6158139" /translation="MTVTSRTLIKNLAALDDGDVAVSGWVETVRDQKKIQFVILRDES GAVQLTYKRQGDEDATADTISGLAAGTFLTATGTLKHDERVKLGGLEIGLSGIEVAAA AIPETPIAADSSIDKRLDWRFIDLRAPRNSLIFRVQTTLVHALRTYWVEHDFIEVFSP KLMATPSESNAELFKVDYFDGVAYLAQSPQFFKQMAQSAGFGKMFEVGPAFRADPSFT SRHATEFTSVDAEISWIESHEDVARLQEELIVAALTAVKEKHGDEIRELFDVEVTVPS IPFPRIPLLEAKDIVAKRGHVIDRADDDLDPEGERQIAAHVMEEFGHEFVFLTDYPST IRPFYHMRNAEDPSITNSYDLIWNGVEITTGAQREHRVDVLEAQAREKGLDPEELGSY LDFFRYGVPPHGGFGMGLNRVLMLLLHQSNLREVTYLFRGPNRLAP" misc_feature complement(2707802..2708758) /gene="aspS" /locus_tag="CMS_2564" /old_locus_tag="CMS2564" /inference="protein motif:HMMPfam:PF00152" /note="HMMPfam hit to PF00152, tRNA synthetase, class II (D, K and N), score 8.3e-65" misc_feature complement(2708411..2708467) /gene="aspS" /locus_tag="CMS_2564" /old_locus_tag="CMS2564" /note="PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1." misc_feature complement(2708798..2709040) /gene="aspS" /locus_tag="CMS_2564" /old_locus_tag="CMS2564" /inference="protein motif:HMMPfam:PF01336" /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding, score 7.7e-13" gene 2709218..2710060 /locus_tag="CMS_2565" /old_locus_tag="CMS2565" /db_xref="GeneID:6158615" CDS 2709218..2710060 /locus_tag="CMS_2565" /old_locus_tag="CMS2565" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711221.1" /db_xref="GI:170782887" /db_xref="GeneID:6158615" /translation="MQIDLNSDLAESFGRWTLGDDDAMLDVVSSANVACGFHAGDPLV MLHALERAARNGVAVGAHVAYRDLQGFGRRDLDASPAELTGDVLYQLAAISGLARTVG ARVSYIKPHGALYNRIAHDPVQAQAVVDAVVALDPTLPVLGLPGSEILRLADAAGLPT RVEAFTDRAYTPEGALVSRRQEGSVIHDPADVAARSVRMATEGTVVAIDGSVVRLDPD SLCVHSDTPGAVGLARAVRDALEAAGVEIRPVPDAAGADAAATAAPAGADRRALPARD RRAL" misc_feature 2709221..2709946 /locus_tag="CMS_2565" /old_locus_tag="CMS2565" /inference="protein motif:HMMPfam:PF03746" /note="HMMPfam hit to PF03746, LamB/YcsF, score 1.3e-131" gene 2710057..2710686 /locus_tag="CMS_2566" /old_locus_tag="CMS2566" /db_xref="GeneID:6158140" CDS 2710057..2710686 /locus_tag="CMS_2566" /old_locus_tag="CMS2566" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711222.1" /db_xref="GI:170782888" /db_xref="GeneID:6158140" /translation="MTLRLLPCGDAAVMLDLDSLDEVLRLQPVLDATRPRGVVDIVPG ARSILVTVDPHVLPLAAARSWALAAEPARPADEAGSRGDAPVEIDVVYDGEDLADVAA LLGIGVREVVERHTSGTWTVAFGGFAPGFGYLAGVPGLEVPRRTSPRPRVPAGAVALA GEFSGIYPRVSPGGWQLIGTTRAVLWDPEREPAALLQPGSAVRFREVDA" misc_feature 2710063..2710644 /locus_tag="CMS_2566" /old_locus_tag="CMS2566" /inference="protein motif:HMMPfam:PF02682" /note="HMMPfam hit to PF02682, Protein of unknown function DUF213, score 3.7e-51" gene 2710746..2711600 /locus_tag="CMS_2567" /old_locus_tag="CMS2567" /db_xref="GeneID:6158141" CDS 2710746..2711600 /locus_tag="CMS_2567" /old_locus_tag="CMS2567" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711223.1" /db_xref="GI:170782889" /db_xref="GeneID:6158141" /translation="MIERTGPLMLVQDAGRPGHGGIGVSPSGALDPRALADANLLVGN APGAAGLEIVLGGAVLRATAAVWVAVTGAVGPLVRTVGRRSRPAPYAAAVLLDAGDAL EIGSAVAGIRWYLAVRGGIDVAPVLGSRATDMLSRVGPAPVAVGDVLPVGSAPARPVP PIDSLAVSAPADGDVVLRASPGPRLDWFVDGSWTALLDRGWEVTAEADRVGVRLDGEP LERRIPGELPSEGVVTGALQVPPSGRPILFLADHPMTGGYPVIGVVARDDVRLAAQLR PGQRIRFV" misc_feature 2710806..2711597 /locus_tag="CMS_2567" /old_locus_tag="CMS2567" /inference="protein motif:HMMPfam:PF02626" /note="HMMPfam hit to PF02626, Urea amidolyase-related,score 2.6e-57" gene complement(2711653..2712471) /locus_tag="CMS_2568" /old_locus_tag="CMS2568" /db_xref="GeneID:6158142" CDS complement(2711653..2712471) /locus_tag="CMS_2568" /old_locus_tag="CMS2568" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711224.1" /db_xref="GI:170782890" /db_xref="GeneID:6158142" /translation="MTDSTGTPSTPAGWYADPAGSDRLRWWDGTRWTDHLADAPAAAA ASSSAGQQGDVQGSAGQPAAAPGSGHVAPEAPGAAAAPPAYGQQAPGQPYGQQPYAQA GYAQTPYAAPTPPPQVPASTSPFTWAIWVLAALPLVSIVLALNVDYRTALEMSPRGPR PDALVASAISSLVQFLLWGGSVALAFVDWRDLTRRGIVRPFHWAWAFIPVAGGVYLIG RSIVVRRRIEGAPANALSPIWLWVGLNVIVAFISIVKFVEAFSTTMQMYSTGRY" misc_feature complement(order(2711701..2711769,2711803..2711871, 2711914..2711982,2712040..2712099)) /locus_tag="CMS_2568" /old_locus_tag="CMS2568" /note="4 probable transmembrane helices predicted for CMS2568 by TMHMM2.0 at aa 125-144, 164-186, 201-223 and 235-257" gene complement(2712590..2715088) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /db_xref="GeneID:6158143" CDS complement(2712590..2715088) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /codon_start=1 /transl_table=11 /product="UvrABC system protein A (UvrA protein) (excinuclease ABC subunit A)" /protein_id="YP_001711225.1" /db_xref="GI:170782891" /db_xref="GeneID:6158143" /translation="MPASPTPPASDHHAADTGQADGFVRVRGASENTLRDVDVDIPRD RIVAFTGVSGSGKSSLAFGTVYAEAQRRFFESVAPYARRLIRQEQTPHVESITGLPPA VALQQRRGAPSTRSTVGTVTTLSNSLRMLMSRAGTYPAGQGRLDSDAFSPNTAAGACP VCHGLGVAHTVTEASLVPDPSLSIREGAISAWPGAWQGKNLRDVTIALGYDVDVPWRE LPRESRDWILFTEEQPVVQITPQRDRVAKPYNGRFWSARSYVLHTLADSASPRLRDAA LAHMVSGTCERCGGSGLTPEALAVTFAGRSIQELNALTLADLATAIAPADGMGDVAVT ITTDLVARLAVLVDLGLGYLSLGRVTTTLSPGEMQRLRLATQLRSGLFGVVYVLDEPS AGLHPADAEPLLEVLEQLRDSGNSVFVVEHDMDVVRRADWIVDVGPGAGQAGGSVVYS GPVDGLREVEASATRPHLFPDLAPPRAERTPRTPTGSIRATGVTLHNLVDLDVEIPLG VMVAVTGVSGSGKSTLVSRVLPDLLRASLAPDRVVVEQADDADGDDDASGPARIARVE GADAVDRLVSVDQRPIGRTPRSTLATYTGLFDAVRRTYAATDEARARGYGAGRFSFNV AGGRCETCQGEGSVTVELLFLPGSYGPCPTCHGARYEPATREIEYHGKSIADVLGMTV DEAHGFLQDVPLAARALATLRDVGLGYLRLGQPATELSGGEAQRIKLATELQRAPRGH TLYLLDEPTTGLHPADVVLLLRQLQGLVDAGNTVVVVEHEMDVVADADRVIDLGPSGG DQGGRIVAQGTPREVADAAGSRTAPYLARRLDAS" misc_feature complement(2712707..2713567) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.5e-29" misc_feature complement(2712890..2712934) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /note="PS00211 ABC transporters family signature." misc_feature complement(2713523..2713546) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2713772..2714959) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.7e-09" misc_feature complement(2713958..2714002) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /note="PS00211 ABC transporters family signature." misc_feature complement(2714915..2714938) /gene="uvrA" /locus_tag="CMS_2569" /old_locus_tag="CMS2569" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2715199..2715411) /locus_tag="CMS_2570" /old_locus_tag="CMS2570" /db_xref="GeneID:6159090" CDS complement(2715199..2715411) /locus_tag="CMS_2570" /old_locus_tag="CMS2570" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711226.1" /db_xref="GI:170782892" /db_xref="GeneID:6159090" /translation="MALTQAAPGQTDIPGISWSPVAAGLWVARRGDEFAGLSEERWGV GFHVTDRLGRDVGDFPTLQEARRALG" gene complement(2715590..2717611) /locus_tag="CMS_2571" /old_locus_tag="CMS2571" /db_xref="GeneID:6158144" CDS complement(2715590..2717611) /locus_tag="CMS_2571" /old_locus_tag="CMS2571" /EC_number="3.2.1.23" /codon_start=1 /transl_table=11 /product="beta-galactosidase" /protein_id="YP_001711227.1" /db_xref="GI:170782893" /db_xref="GeneID:6158144" /translation="MDPDRRDSPRPLTWPRGTEALRYGGDYNPEQWPRETWHEDVRLM REAGVNLVSIGIFSWSVLEPSEGVYDFALLDEVMDLLHANGIDVDLGTPTAAPPAWFW ARYPDSRPVTRSGTALGFGSRGMVSPSSPEYRRAATEIARRLAERYRDHPSLVMWHVH NEYGAPISDCYSDHSVRAFRAWLEARYGSLDELNRAWGTSFWGQRYGTWDEIDAPRQS ASTTNQTQRLDFARFTSDALLACFTAERDAIREHTPHLPITTNFMASSCPSIDYWRWS REVDVVANDHYLTAERRDSHVMLALDADLTRSFAGNRPWMLMEHSTSAVNWQPRNIAK RPGEMARNSLAHVARGSDAVMFFQFRASRFGAEKFHSAMLPHGGTDTRIWREVVALGA DVAALAPVRGSRVRARVAILWDIQSSWAQDLEWRPSVELDHRERVEAFYTALWHRGVT VDFAHPHHDLSGYDVVLAPAQYLLDEEGSRNLRDFVAGGGRLVVSYFSGIVDQDDAVH EGMAPGALRDVLGLGVQEFIPLRADETVALDSGATGTGWADDIVLCGAEALVRYASGP AADGPAITRNAVGSGAAWYVSTRLDPAALDALLADVLAQAGIDAEPAPDGLERVTRHG DGEAFTFLVNHADDPRTVAIRGAELLTGTEADGALEVPAGAVRVVRTAG" misc_feature complement(2715761..2716987) /locus_tag="CMS_2571" /old_locus_tag="CMS2571" /inference="protein motif:HMMPfam:PF02449" /note="HMMPfam hit to PF02449, Glycoside hydrolase, family 42, score 1e-127" gene 2717812..2719106 /locus_tag="CMS_2572" /old_locus_tag="CMS2572" /pseudo /db_xref="GeneID:6158145" misc_feature 2717860..2718531 /locus_tag="CMS_2572" /old_locus_tag="CMS2572" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 1.2e-05" /pseudo gene 2719316..2720203 /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /db_xref="GeneID:6158146" CDS 2719316..2720203 /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711228.1" /db_xref="GI:170782894" /db_xref="GeneID:6158146" /translation="MLVPYAMLAPGIILFALFMLAPIVYTLMLSFQRKQVVGLGLGSG GSTTVFAGLDNYAGALGDPEFAASVGRVLLYGLILIPCMLGLALLFALLLDSRRSRAT GFSRVAIFLPYAVPAVISSLLWGFLYLPAVSPFYYLADLVGWDAPEVLSSGLIMFGIA NIALWGGVGFNMIVMYTSLKAVPTEIYEAARIDGASEVQVALRIKIPIITPSLIMTGL FSIIATLQVFAEPTTLRPLTNTLSTSWTPLMKIYRDAFTRDDIYSAAASSIVIAGATF LVSFLFLRVVQKRAFGQED" sig_peptide 2719316..2719414 /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /note="Signal peptide predicted for CMS2574 by SignalP 2.0 HMM (Signal peptide probability 0.626) with cleavage site probability 0.364 between residues 33 and 34" misc_feature order(2719331..2719399,2719418..2719486,2719529..2719597, 2719634..2719702,2719760..2719828,2719931..2719999, 2720096..2720164) /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /note="7 probable transmembrane helices predicted for CMS2574 by TMHMM2.0 at aa 6-28, 35-57, 72-94, 107-129,149-171, 206-228 and 261-283" misc_feature 2719508..2720188 /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 0.0007" misc_feature 2719850..2719936 /locus_tag="CMS_2574" /old_locus_tag="CMS2574" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2720207..2721109 /locus_tag="CMS_2575" /old_locus_tag="CMS2575" /db_xref="GeneID:6158147" CDS 2720207..2721109 /locus_tag="CMS_2575" /old_locus_tag="CMS2575" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711229.1" /db_xref="GI:170782895" /db_xref="GeneID:6158147" /translation="MSTITAPRAAGERALTPPLAPRRRAPGRPSAVATVILILGAVYC LLPVVWVVMASTKSSGELFSTFTFAPSANLFANIAELSAYRDGIYWRWMLNTALYAGV GAILSTYVSALSGYVLAKFAFPGRDAVFTVLLMGVLVPGVILAIPQYFLMAQVGLTNT YWAVLLPQIISPYGIYLARIYSAASVPTDVMEAARTDGAKEMYVFHRIAMPMMLPGLV TILLFQFVAIWNNFLLPYIMLGDDSLFPLTVGLNGLLNQGASAPSMYTLVITGALLSI LPLIAMFLLLQRFWRVDLAAGAVK" misc_feature order(2720300..2720368,2720492..2720560,2720591..2720659, 2720687..2720755,2720816..2720884,2720996..2721064) /locus_tag="CMS_2575" /old_locus_tag="CMS2575" /note="6 probable transmembrane helices predicted for CMS2575 by TMHMM2.0 at aa 32-54, 96-118, 129-151, 161-183,204-226 and 264-286" misc_feature 2720471..2721079 /locus_tag="CMS_2575" /old_locus_tag="CMS2575" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 2.5e-18" gene 2721135..2722151 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /db_xref="GeneID:6158148" CDS 2721135..2722151 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001711230.1" /db_xref="GI:170782896" /db_xref="GeneID:6158148" /translation="MVTRSGRRRPTIEDVAAEAGVSRGTVSRVLNGGHWVSADKLQAV NAAIKKTQYRVNPHARGLVTRRSDSVAFLLTERHELLFEDPNFSRLMRGTAEALAERD VSLVLIMAGTPDEQRRAKEFIIAGHIDGVLLVSWHSGARDLVNDIHLAGVPVVACGVP LGFERSLGYVAADDEEGARTMTAHLRGLGRTRVETITGPPDTSGGTKRLEGYRAELGD AFDPALVAVGDYGVESGARAMAELLERAPDLDAVFAANDLMATGALRVLAERGRRVPE DVAVGGFDDSPVAATASPALTTMRQPFDRVSSEMVRLLMQVIEGERPASIVLPTDLVI RDSA" misc_feature 2721162..2721239 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 8.7e-08" misc_feature 2721162..2721227 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /note="Predicted helix-turn-helix motif with score 2159.000, SD 6.54 at aa 10-31, sequence PTIEDVAAEAGVSRGTVSRVLN" misc_feature 2721168..2721224 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /note="PS00356 Bacterial regulatory proteins, lacI family signature." misc_feature 2721333..2722142 /locus_tag="CMS_2576" /old_locus_tag="CMS2576" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 3.4e-09" gene complement(2722231..2723274) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /db_xref="GeneID:6158149" CDS complement(2722231..2723274) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /codon_start=1 /transl_table=11 /product="RNA polymerase principal sigma factor HrdD" /protein_id="YP_001711231.1" /db_xref="GI:170782897" /db_xref="GeneID:6158149" /translation="MTMTPTRTTAAETASDTELDHIESARPVDPYADSDLPEPSLVTP GASTDAVKDYLRQIGRVPLLTAELEVSVARRIEVGVLSQEVLDTRTDLTPAERREYQT LAQDGMRAKQHLVNANLRLVVSIAKRYTGRGLPFLDLIQEGNMGLVRAVEKFDYQAGF KFSTYASWWIKQSITRGMADTSRTIRIPVHTVEHINRINAVQRELGDELGRDPSMEEI ARESDTPVTKVRYLLDRAQEPMSLQVLVGGSGGDGDTEMADLIEDADVTQPIDVVTQQ LMAAHVTRLIDGLAERDAEVVRMRFGLAGLEPRSLAFVSQQLGVTRERVRQIEKKVLA KLRIPELEMYIRG" misc_feature complement(2722261..2722422) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /inference="protein motif:HMMPfam:PF04545" /note="HMMPfam hit to PF04545, Sigma-70 region 4, score 1.3e-17" misc_feature complement(2722285..2722350) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /note="Predicted helix-turn-helix motif with score 1854.000, SD 5.50 at aa 282-303, sequence RSLAFVSQQLGVTRERVRQIEK" misc_feature complement(2722471..2722713) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /inference="protein motif:HMMPfam:PF04539" /note="HMMPfam hit to PF04539, Sigma-70 region 3, score 3.3e-16" misc_feature complement(2722723..2722935) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /inference="protein motif:HMMPfam:PF04542" /note="HMMPfam hit to PF04542, Sigma-70 region 2, score 2e-25" misc_feature complement(2722822..2722863) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /note="PS00715 Sigma-70 factors family signature 1." misc_feature complement(2723023..2723133) /gene="hrdD" /locus_tag="CMS_2577" /old_locus_tag="CMS2577" /inference="protein motif:HMMPfam:PF00140" /note="HMMPfam hit to PF00140, Sigma-70 region 1.2, score 1.4e-11" gene 2723630..2724235 /locus_tag="CMS_2578" /old_locus_tag="CMS2578" /db_xref="GeneID:6158760" CDS 2723630..2724235 /locus_tag="CMS_2578" /old_locus_tag="CMS2578" /codon_start=1 /transl_table=11 /product="putative phosphoglycerate mutase related enzyme" /protein_id="YP_001711232.1" /db_xref="GI:170782898" /db_xref="GeneID:6158760" /translation="MHNPHGVLYGRIPGYGLSELGHRMADAAAQALEEAGAPVNRVIA SPLQRAQESAAPWAERFALEVQTDERVIEPTNRFEGSKFPSPARIARSPRLWPLVVDP VKPSWGESYRSIAARMAEAVKAAYRSVPDGDVVIVSHQLPIWMVHLSLSGERLFHDPR QRRCALSSITTVERVGDRFVETGYIDPAAGLAADAVDQGAV" misc_feature 2723657..2724181 /locus_tag="CMS_2578" /old_locus_tag="CMS2578" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 0.00013" gene 2724232..2724843 /locus_tag="CMS_2579" /old_locus_tag="CMS2579" /db_xref="GeneID:6158150" CDS 2724232..2724843 /locus_tag="CMS_2579" /old_locus_tag="CMS2579" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711233.1" /db_xref="GI:170782899" /db_xref="GeneID:6158150" /translation="MMPGVSRRSILAAAASAVLGAVALSGCTEDPLAAEFKAGDNKRY IAGDGTFTEIPLAERAAPVEFSGTLSDGTEITSADYVGAVTVLNFWYAECPPCRLEAK DLQAASEEHAPDGVKFLGVNTRDQRPNVDSFDKTYGITYPSVLDVEDTSMQLAFAGTI APNAVPATIILDRQGRVASRVLGQIDPGVLRTLVKDTVAEAAG" sig_peptide 2724232..2724333 /locus_tag="CMS_2579" /old_locus_tag="CMS2579" /note="Signal peptide predicted for CMS2579 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.377 between residues 34 and 35" misc_feature 2724280..2724312 /locus_tag="CMS_2579" /old_locus_tag="CMS2579" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2724844..2725584 /locus_tag="CMS_2580" /old_locus_tag="CMS2580" /db_xref="GeneID:6158151" CDS 2724844..2725584 /locus_tag="CMS_2580" /old_locus_tag="CMS2580" /codon_start=1 /transl_table=11 /product="putative cytochrome C biogenesis protein" /protein_id="YP_001711234.1" /db_xref="GI:170782900" /db_xref="GeneID:6158151" /translation="MDQIQSVLSGQLLVAVPLALLAGLVSFASPCVLPLVPGYLGYIG GMAEAKGGSATRRRLLLGTALFVLGFSAVFIVTTLVSATAGFWLMRWQDVITRILGVV LIVMGLVFTGRLGFLQRQVKSSWRPATGLAGAPLLGVVFGIGWAPCIGPTLAVVISMS LTSADAGRGVLLGVAYCIGLGVPFLLVALGLGWMTRTVGFLRRHIRTLNLVGGALLVI TGVLMVSGLWSAWMLQLQGVIATYVPAI" sig_peptide 2724844..2724927 /locus_tag="CMS_2580" /old_locus_tag="CMS2580" /note="Signal peptide predicted for CMS2580 by SignalP 2.0 HMM (Signal peptide probability 0.961) with cleavage site probability 0.736 between residues 28 and 29" misc_feature order(2724886..2724954,2725015..2725083,2725126..2725194, 2725252..2725320,2725348..2725416,2725471..2725539) /locus_tag="CMS_2580" /old_locus_tag="CMS2580" /note="6 probable transmembrane helices predicted for CMS2580 by TMHMM2.0 at aa 15-37, 58-80, 95-117, 137-159,169-191 and 210-232" misc_feature 2724898..2725518 /locus_tag="CMS_2580" /old_locus_tag="CMS2580" /inference="protein motif:HMMPfam:PF02683" /note="HMMPfam hit to PF02683, Cytochrome c biogenesis protein, transmembrane region, score 7.2e-46" gene 2725568..2727214 /locus_tag="CMS_2581" /old_locus_tag="CMS2581" /db_xref="GeneID:6158152" CDS 2725568..2727214 /locus_tag="CMS_2581" /old_locus_tag="CMS2581" /codon_start=1 /transl_table=11 /product="putative integral membrane cytochrome synthesis protein" /protein_id="YP_001711235.1" /db_xref="GI:170782901" /db_xref="GeneID:6158152" /translation="MSRPSDHVDSPRQAPREGAPITQPKLGFLGTLRWFWRQLTSMRT ALFLLLMLAFAAIPGSLVPQRSSDPNGVTQFRADNPDLYPILDKLQVFDTYSSVWFSS IYLLLFISLIGCVVPRAKHHFDALRQAPPKTPARLSRLAGYTTRATTADPVDAIRQAR ALLKRQRYRTVLVDDASDAGGVLSVSAERGYMRETGNLVFHSALVGILVTVGIGGGFG YSGQKVLVEGQSFVNTLSTFDSFNPGRFFDDSSLTPYRVKLNALHVQYEQENPNAIGQ PLDFTADVTADVPGGQPQDREVKVNDPLAIGGTDMYLLGNGYAPHVTVRDPQGTVVYS ADVPFLPQDAKLTSLGVVKVPDGLREQVGMLGFFYPTQGAEKAPFFSSYPDLDNPLLT LNVYTGDLGIDGGVPTSVYTLDTGNLTQLTGGKTGVQSIELAPGQTTDLPDGLGSVSL DSVPRFVSFDVHHDPTQRWVLLFAILVLGGLLTSLFVPRRRVWVKAVPQADGSTTLEY AGLARGEDPTLEAAVAALASTHVAGLTPDAVSDAEVRLHS" misc_feature 2725691..2727142 /locus_tag="CMS_2581" /old_locus_tag="CMS2581" /inference="protein motif:HMMPfam:PF05140" /note="HMMPfam hit to PF05140, ResB-like, score 1.1e-57" misc_feature order(2725700..2725753,2725850..2725918,2726159..2726227, 2726972..2727031) /locus_tag="CMS_2581" /old_locus_tag="CMS2581" /note="4 probable transmembrane helices predicted for CMS2581 by TMHMM2.0 at aa 45-62, 95-117, 198-220 and 469-488" gene 2727211..2728236 /locus_tag="CMS_2582" /old_locus_tag="CMS2582" /db_xref="GeneID:6158153" CDS 2727211..2728236 /locus_tag="CMS_2582" /old_locus_tag="CMS2582" /codon_start=1 /transl_table=11 /product="putative cytochrome biogenesis protein" /protein_id="YP_001711236.1" /db_xref="GI:170782902" /db_xref="GeneID:6158153" /translation="MNTAMLDDVSLIALIVAMGLYAAAFIAFALDLARRSALVADAAT TAARQPSAVGATAARRGGTTTIEREPASSGGGRVATGPGAPVAAGRSLSLNVAMVLLV VGFVAHAIATVLRGLAASRVPWANMYEFAMTGTLLILSVYLIVLTRRDLRFLGTFVTG LILILLGIAVVQYRVEVAPLPPSLQSYWLVIHVFVAALGTGFFALAFALSGVQLLQFR RESLAADAQAAKMRFLATLPDSVTLESMAYRLNIVGFIFWTFTLMAGAVWAERAWGRY WGWDTKEVWTFIIWVLYAGYIHARATRGWRGSRSAWLAIIGFSAVMFNFGVVNVFFKG LHTYSGL" sig_peptide 2727211..2727336 /locus_tag="CMS_2582" /old_locus_tag="CMS2582" /note="Signal peptide predicted for CMS2582 by SignalP 2.0 HMM (Signal peptide probability 0.916) with cleavage site probability 0.463 between residues 42 and 43" misc_feature order(2727238..2727306,2727484..2727552,2727580..2727648, 2727667..2727735,2727778..2727846,2727958..2728017, 2728060..2728113,2728138..2728206) /locus_tag="CMS_2582" /old_locus_tag="CMS2582" /note="8 probable transmembrane helices predicted for CMS2582 by TMHMM2.0 at aa 10-32, 92-114, 124-146, 153-175,190-212, 250-269, 284-301 and 310-332" misc_feature 2727580..2728218 /locus_tag="CMS_2582" /old_locus_tag="CMS2582" /inference="protein motif:HMMPfam:PF01578" /note="HMMPfam hit to PF01578, Cytochrome c assembly protein, score 5.9e-43" gene complement(2728276..2729259) /gene="menC" /locus_tag="CMS_2583" /old_locus_tag="CMS2583" /db_xref="GeneID:6158154" CDS complement(2728276..2729259) /gene="menC" /locus_tag="CMS_2583" /old_locus_tag="CMS2583" /EC_number="4.2.1.-" /note="catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate" /codon_start=1 /transl_table=11 /product="O-succinylbenzoate synthase" /protein_id="YP_001711237.1" /db_xref="GI:170782903" /db_xref="GeneID:6158154" /translation="MLPALDDLLATARVVALPLRTRFRGLDVREAVLIEGPLGWTEFS PFTEYDDAESAAWLVAAFDFGWTAPPAPLRDHVLVNATIPAVEASRVAEVLARFPGCR TAKVKVAERGTTLADDVTRVAEVRRLLGPEGRVRIDANAAWNVDEAEHAIHALAEHDL EYAEQPCASVEELAELRGRIRHLGVPIAADESVRKADDPLRVARAGAADLLVIKAQPL GGIHRALRITRDAGLPVVVSSALDTSVGISMAAHLAAAIPELPHDCGLGTVSLFVEDV VAEPLVPVDGRIPVRRVTPDASLLDAHAADADRRAWWLDRIRRTHAVLARA" misc_feature complement(2728333..2729043) /gene="menC" /locus_tag="CMS_2583" /old_locus_tag="CMS2583" /inference="protein motif:HMMPfam:PF01188" /note="HMMPfam hit to PF01188, Mandelate racemase/muconate lactonizing enzyme, score 4.9e-08" gene 2729314..2730225 /gene="menB" /locus_tag="CMS_2584" /old_locus_tag="CMS2584" /db_xref="GeneID:6158806" CDS 2729314..2730225 /gene="menB" /locus_tag="CMS_2584" /old_locus_tag="CMS2584" /EC_number="4.1.3.36" /note="catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA" /codon_start=1 /transl_table=11 /product="naphthoate synthase" /protein_id="YP_001711238.1" /db_xref="GI:170782904" /db_xref="GeneID:6158806" /translation="MVKQVSDIHDPTRWRDVPLAEDFTDITYHHDLTGRIARIAFDRP EVRNAFRPRTVDELYQALDDARQDPRIGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRD GYKYGEGETAEGVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDL TIASAEHGRFKQTDADVGSFDGGYGSAYFARQVGQKAAREVFFLAEEHSAQRMYEMGA VNRVVPHAELESTALDWAETILGKSPTAIRMLKYAFNAVDDGMVGQQVFAGEATRLAY GTDEAVEGRDSFLEKRAPDWSPYPWQF" misc_feature 2729422..2729985 /gene="menB" /locus_tag="CMS_2584" /old_locus_tag="CMS2584" /inference="protein motif:HMMPfam:PF00378" /note="HMMPfam hit to PF00378, Enoyl-CoA hydratase/isomerase, score 4.6e-39" misc_feature 2730019..2730042 /gene="menB" /locus_tag="CMS_2584" /old_locus_tag="CMS2584" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2730287..2731459 /gene="menE" /locus_tag="CMS_2585" /old_locus_tag="CMS2585" /db_xref="GeneID:6158805" CDS 2730287..2731459 /gene="menE" /locus_tag="CMS_2585" /old_locus_tag="CMS2585" /EC_number="6.2.1.26" /codon_start=1 /transl_table=11 /product="O-succinylbenzoate--CoA ligase" /protein_id="YP_001711239.1" /db_xref="GI:170782905" /db_xref="GeneID:6158805" /translation="MPLLRAALAGDGPALLARPVDAPAAAVAAGDPPPPAEVERRVAL VVETSGTTSRPKRVALSSDALLASAAASQAALGAPGQWILALPTHYIAGLQVIVRSIA AGTAPAVLAPGSFDPRAFAELAGSLDARVARYTSLVPTQLHRLVDAAEGGAGVDRAAT GDDTRRIRDAVRGLDAILVGGQATPPHLVDRAAALGWRVVRTYGSSETAGGCVYDGVP VATAEVAVVDGQVELAGPMLAEGYLGDPAATDAAFAEHDGRRWYRTGDGGELVDGVLR IIGRLDDVVISGGEKLRLAAVEEAVRSLAAWRAGLGEAVAVPGEHAGWGQRPVVFVPG VVDLELAERVRRELAARLGRVAGSTLVRGIDAMPSLPSGKPDRRALRALADGDPTV" sig_peptide 2730287..2730376 /gene="menE" /locus_tag="CMS_2585" /old_locus_tag="CMS2585" /note="Signal peptide predicted for CMS2585 by SignalP 2.0 HMM (Signal peptide probability 0.926) with cleavage site probability 0.223 between residues 30 and 31" misc_feature 2730293..2731234 /gene="menE" /locus_tag="CMS_2585" /old_locus_tag="CMS2585" /inference="protein motif:HMMPfam:PF00501" /note="HMMPfam hit to PF00501, AMP-dependent synthetase and ligase, score 2e-07" misc_feature 2730419..2730454 /gene="menE" /locus_tag="CMS_2585" /old_locus_tag="CMS2585" /note="PS00455 Putative AMP-binding domain signature." gene complement(2731549..2731722) /locus_tag="CMS_2586" /old_locus_tag="CMS2586" /db_xref="GeneID:6158808" CDS complement(2731549..2731722) /locus_tag="CMS_2586" /old_locus_tag="CMS2586" /codon_start=1 /transl_table=11 /product="general stress response protein" /protein_id="YP_001711240.1" /db_xref="GI:170782906" /db_xref="GeneID:6158808" /translation="MSADDKAQNTGEKLAGKAKEAFGKVSGDDSKVAEGKTQQSGASA KQAGENIKDVFKK" misc_feature complement(2731552..2731710) /locus_tag="CMS_2586" /old_locus_tag="CMS2586" /inference="protein motif:HMMPfam:PF05532" /note="HMMPfam hit to PF05532, CsbD-like, score 3.7e-12" gene 2731855..2732163 /locus_tag="CMS_2587" /old_locus_tag="CMS2587" /db_xref="GeneID:6158155" CDS 2731855..2732163 /locus_tag="CMS_2587" /old_locus_tag="CMS2587" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711241.1" /db_xref="GI:170782907" /db_xref="GeneID:6158155" /translation="MATRTPDARAKGLLSWLILAVGVVIAAFTVAILVAAVQADGVGE VTGTLVAGGIATVVAAVAFVDQRRKVRATRTAELAAGTRTNADADAGAAAPGDDAVSR" sig_peptide 2731855..2731971 /locus_tag="CMS_2587" /old_locus_tag="CMS2587" /note="Signal peptide predicted for CMS2587 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.918 between residues 39 and 40" misc_feature order(2731891..2731959,2731987..2732046) /locus_tag="CMS_2587" /old_locus_tag="CMS2587" /note="2 probable transmembrane helices predicted for CMS2587 by TMHMM2.0 at aa 13-35 and 45-64" gene 2732286..2733248 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /db_xref="GeneID:6158156" CDS 2732286..2733248 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711242.1" /db_xref="GI:170782908" /db_xref="GeneID:6158156" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 2732358..2732423 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 2732423..2732544 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 2732544..2732609 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 2732694..2733236 /locus_tag="CMS_2588" /old_locus_tag="CMS2588" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(2733259..2735067) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /db_xref="GeneID:6158157" CDS complement(2733259..2735067) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711243.1" /db_xref="GI:170782909" /db_xref="GeneID:6158157" /translation="MSVTGVTGEERDDFSREESKQIRRRSTRLLVSTIQPVKRTLILT AATILVATAANVAGPALIGIGLDRALPALLDTGDFTGLALVIGAYVLVAITGAVLVAK YQVMSARIAQEILLDLRKRMFLHTQKLSLEFHETYTSGRIISRQTSDLDSIRELLNGG INQLVQGALYMAFTAIALFSFDWVSGLVLLAALVPLFFLSLWFAVKSQALFRQTRVKS ARLIVHFVETMTGIRAVKAFRKEKRNAEEFSEHVEGYRDTNMRVIQVFGIFDPGLILI GNVTVAVVLLVGGLRVADGQLGIGALLAVVLYTRQFFGPAQDMAMFYNSYQSASAALE KISGVLEEEPSVPDPVQPVDLWESTGHVSFEGVEFGYGKGKTILPRFDLDMPAGQTIA LVGSTGAGKTTLAKLISRFYDPSDGRVALDGIDLRDLHPKDLRRAIVMVTQEAYLFSG SVADNIAIGKPDATRGEIRAAAEAVGAHTFIESLPDGYDTDVNKRGGRVSAGQRQLIS FARAFLADPAVLILDEATSSLDIPSERLVQQGLTTLLADRTAIIIAHRLSTVAIADRV LVMEQGRIVEDGTPESLIQGTGRFSQLHAAWRESLV" misc_feature complement(2733352..2733906) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.3e-62" misc_feature complement(2733529..2733573) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /note="PS00211 ABC transporters family signature." misc_feature complement(2733862..2733885) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2734120..2734947) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 5.3e-42" misc_feature complement(order(2734126..2734179,2734207..2734275, 2734453..2734521,2734534..2734602,2734765..2734833, 2734876..2734944)) /locus_tag="CMS_2589" /old_locus_tag="CMS2589" /note="6 probable transmembrane helices predicted for CMS2589 by TMHMM2.0 at aa 42-64, 79-101, 156-178, 183-205,265-287 and 297-314" gene complement(2735064..2736836) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /db_xref="GeneID:6158158" CDS complement(2735064..2736836) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711244.1" /db_xref="GI:170782910" /db_xref="GeneID:6158158" /translation="MLMRLLPFARPAMPSIIAGMVVALIGSLLSLVIPQILRGLVDGP LGDGDSAAVVPAVLLILGLGILEAAMIALRRWFVLKPGTLMEADMRNAFYRKLQRLPV AFHDRWQSGQLLSRMVSDLNLIRRWMAFGLVLFIVNILTILVGIGFLVSIDWRLGLGF LVCSIPLWVYGYLFEQKYSSVARLSQDQSGDLATSVEQSVHGIRVLKAFGRGKHMHDA FAEQAEELRGTEIKKAKAIAGIWLWLLLVPDLTFALALLGGVLLAAGGQISVGDLVAF FATAAVLRWPIESVGFLLSMTFDARTAIDRYFEVMDEDDTITDPATPVRIQEPRGRLV FRGARFRYQDAVPGQPDLIDGVDLDLQPGETMALVGITGCGKSTLTALTTRLYDVTGG SVELDGVDIRNLGLEELRSRIAMAFEDATLFSSSVRDNVLLGRPDLADGGPEAERVLR EALDIAQAGFVHDLPDGVDTTVGEEGLSLSGGQRQRLALARAVAAAPDVLVLDDPLSA LDVDTEALVEAALRRVLASTTALIVAHRPSTVMLADRVALMQDGRITAVGRHSDLLAT SEHYRFVISSLDVEGNTVREEASA" sig_peptide complement(2735064..2735216) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /note="Signal peptide predicted for CMS2590 by SignalP 2.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.390 between residues 51 and 52" misc_feature complement(2735181..2735750) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.3e-50" misc_feature complement(2735358..2735402) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /note="PS00211 ABC transporters family signature." misc_feature complement(2735706..2735729) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(order(2735952..2736020,2736048..2736116, 2736315..2736371,2736381..2736449,2736618..2736686, 2736729..2736800)) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /note="6 probable transmembrane helices predicted for CMS2590 by TMHMM2.0 at aa 13-36, 51-73, 130-152, 156-174,241-263 and 273-295" misc_feature complement(2735976..2736791) /locus_tag="CMS_2590" /old_locus_tag="CMS2590" /inference="protein motif:HMMPfam:PF00664" /note="HMMPfam hit to PF00664, ABC transporter,transmembrane region, score 4e-41" gene complement(2737516..2738700) /locus_tag="CMS_2591" /old_locus_tag="CMS2591" /db_xref="GeneID:6158159" CDS complement(2737516..2738700) /locus_tag="CMS_2591" /old_locus_tag="CMS2591" /EC_number="3.5.3.18" /note="extra N-terminal integral membrane region ALL other homologues" /codon_start=1 /transl_table=11 /product="integral membrane NG,NG-dimethylarginine dimethylaminohydrolase" /protein_id="YP_001711245.1" /db_xref="GI:170782911" /db_xref="GeneID:6158159" /translation="MSAALVSAGVSAILGLLFSVLTLFSSNQPSAAVLVTLLDYWTVH TLVAFVLLAALAGVGMHRRLWTSILGSVAAAVVGALTGSLVGALGQGATVTGDIVGPL LETLLGLNLMFVLGVALASILLGRRLWARLVGAGDAEVVRERVALVRIPSSHLADGEL THLDRRPVDSELADQQWERYVLAFEEAGWSTREVPPADDHPDSVFVEDAVLVLGTTAV LLTSGADSRRGERSGVERALEDMDLQVTSIDLPATIDGGDVLEVGRTLYVGASSRTNA AGIQRLREIARPLGYAVVGVPVSRTLHLKSQVTALPDGTVIGYEPLVDEPRLFPSFLP VPEAEGTAVVALDDDTLLVSAAAPRTADLLRGLGYEIVAVDISEFEKLEGCVTCLSVR IG" sig_peptide complement(2737516..2737608) /locus_tag="CMS_2591" /old_locus_tag="CMS2591" /note="Signal peptide predicted for CMS2591 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.508 between residues 31 and 32" misc_feature complement(2737522..2738289) /locus_tag="CMS_2591" /old_locus_tag="CMS2591" /inference="protein motif:HMMPfam:PF02274" /note="HMMPfam hit to PF02274, Amidinotransferase, score 5.6e-40" misc_feature complement(order(2738326..2738394,2738437..2738505, 2738524..2738583,2738626..2738694)) /locus_tag="CMS_2591" /old_locus_tag="CMS2591" /note="4 probable transmembrane helices predicted for CMS2591 by TMHMM2.0 at aa 3-25, 40-59, 66-88 and 103-125" gene complement(2739107..2739222) /locus_tag="CMS_r004" /old_locus_tag="CMSr004" /db_xref="GeneID:6158160" rRNA complement(2739107..2739222) /locus_tag="CMS_r004" /old_locus_tag="CMSr004" /product="5S ribosomal RNA" /db_xref="GeneID:6158160" gene complement(2739392..2742436) /locus_tag="CMS_r005" /old_locus_tag="CMSr005" /db_xref="GeneID:6159111" rRNA complement(2739392..2742436) /locus_tag="CMS_r005" /old_locus_tag="CMSr005" /product="23S ribosomal RNA" /db_xref="GeneID:6159111" gene complement(2742883..2744400) /locus_tag="CMS_r006" /old_locus_tag="CMSr006" /db_xref="GeneID:6159112" rRNA complement(2742883..2744400) /locus_tag="CMS_r006" /old_locus_tag="CMSr006" /product="16S ribosomal RNA" /db_xref="GeneID:6159112" gene complement(2744958..2746583) /gene="purH" /locus_tag="CMS_2592" /old_locus_tag="CMS2592" /db_xref="GeneID:6159113" CDS complement(2744958..2746583) /gene="purH" /locus_tag="CMS_2592" /old_locus_tag="CMS2592" /EC_number="3.5.4.10" /note="involved in de novo purine biosynthesis" /codon_start=1 /transl_table=11 /product="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase" /protein_id="YP_001711246.1" /db_xref="GI:170782912" /db_xref="GeneID:6159113" /translation="MSGPRHDPSLFRDRDDIEVARALVSVSDKTGLLELAAALAGAGV EIVSTGSTASTIAEAGYPVTQVQDVTGFPESLDGRVKTLHPAVHAGLLADLRLESHEV QLAELGISPFQLVVVNLYPFVETVASGAPASDVIEQIDIGGPAMVRASAKNHANVAIV VSPSSYDEVIQAVGSGGTTLEQRRRLAAAAFAHTADYDRAVADYFRSTVVGAGSSEPA DPAWPASWHVAGELAQVLRYGENSHQDAALYRRPDGTGIAQAVQLHGKEMSYNNFVDA DAAVRAAYDFAEPAVAIIKHANPCGIAVAAPRAVDAIAAAHRSAHDCDPVSAFGGVIA ANRTVTLGMAETVKEIFTEVLVAPGFDDDALTLLKTKKNLRLLTLPEGYHREGLEARQ ISGGYLVQSGDAFPTDGTRISVSWTLATGDPVDEQTLADLEFAWKACRAVKSNAILLA HHGASVGVGMGQVNRVDSCQLAVQRAGDRASGSVAASDAFFPFADGLQVLLDAGVRAV VQPGGSVRDEEVVAAARAAGVAMYFTGERHFFH" misc_feature complement(2745156..2746136) /gene="purH" /locus_tag="CMS_2592" /old_locus_tag="CMS2592" /inference="protein motif:HMMPfam:PF01808" /note="HMMPfam hit to PF01808, AICARFT/IMPCHase bienzyme,score 6.3e-134" misc_feature complement(2746149..2746493) /gene="purH" /locus_tag="CMS_2592" /old_locus_tag="CMS2592" /inference="protein motif:HMMPfam:PF02142" /note="HMMPfam hit to PF02142, Methylglyoxal synthase-like, score 1.7e-47" gene complement(2746580..2747179) /gene="purN" /locus_tag="CMS_2593" /old_locus_tag="CMS2593" /db_xref="GeneID:6158900" CDS complement(2746580..2747179) /gene="purN" /locus_tag="CMS_2593" /old_locus_tag="CMS2593" /EC_number="2.1.2.2" /note="glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /protein_id="YP_001711247.1" /db_xref="GI:170782913" /db_xref="GeneID:6158900" /translation="MRVLNVVVLISGSGTNLHALLEAADHADYPARVVAVGADRDADG LVFAEERGIPTFTVPFASFPDRAAWGDELSAAIAGWDPDLVVLSGFMRLLPPRAVQAF APRIVNTHPAYLPEFPGAHAVRDAIAAGATSSGASIIVVDTGVDTGPVLAQERVPVEP GDTEHSLHERIKVVERRLLVDTVRAISLGTIDLKELSPA" misc_feature complement(2746631..2747170) /gene="purN" /locus_tag="CMS_2593" /old_locus_tag="CMS2593" /inference="protein motif:HMMPfam:PF00551" /note="HMMPfam hit to PF00551, Formyl transferase,N-terminal, score 2.5e-44" gene complement(2747183..2748463) /locus_tag="CMS_2594" /old_locus_tag="CMS2594" /db_xref="GeneID:6158903" CDS complement(2747183..2748463) /locus_tag="CMS_2594" /old_locus_tag="CMS2594" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711248.1" /db_xref="GI:170782914" /db_xref="GeneID:6158903" /translation="MNRHATALFAALEALLVVGVGVALPLVPLTVLWAGQYDLQIDWG VFARTAVDLWLLGHGVPLTASLDPSLASSLGLPGVDAPFALTLAPLGFALLTLLLGIR AGRRIVETDHPGIGAGSAVATTAVLSLGLALAAQHDGVSPALVRGAILPTLVLALGLL VGGIARADRARARRWWGSLSSGRAAGAIRGARDAFDRLPDGAASVVATAVRGGAATAF AVVAVSAVVVAVLLGLQYATVITLYETLQTGIVGGVALTLAQIALLPNLVMWAASWLI GPGFALGTGSSISPLGTTVGPIPSVPVLGILPQGAFDLGYLGILVPVVVSFVAAVALS PRVARIPEPEARRWPWFLVAGLGMGVVGAVVLALLAVLSGGAAGPGRLADVGPAAGWI LLVAFLEIGVASVAGMFVSGLMAPLVRRSPEGRG" sig_peptide complement(2747183..2747284) /locus_tag="CMS_2594" /old_locus_tag="CMS2594" /note="Signal peptide predicted for CMS2594 by SignalP 2.0 HMM (Signal peptide probability 0.969) with cleavage site probability 0.940 between residues 34 and 35" misc_feature complement(order(2747234..2747302,2747345..2747413, 2747450..2747518,2747561..2747629,2747648..2747716, 2747744..2747812,2747969..2748037,2748065..2748124, 2748161..2748229,2748377..2748445)) /locus_tag="CMS_2594" /old_locus_tag="CMS2594" /note="10 probable transmembrane helices predicted for CMS2594 by TMHMM2.0 at aa 7-29, 79-101, 114-133, 143-165,218-240, 250-272, 279-301, 316-338, 351-373 and 388-410" gene complement(2748625..2749512) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /db_xref="GeneID:6158161" CDS complement(2748625..2749512) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /EC_number="6.2.1.5" /note="Catalyzes the only substrate-level phosphorylation in the TCA cycle" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit alpha" /protein_id="YP_001711249.1" /db_xref="GI:170782915" /db_xref="GeneID:6158161" /translation="MSILLDENSKIIVQGLTGSEGTKHAGRMLASGSKVVGGVNPRKA GSTVTIEGVELPIFGSVAEAMTETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITE GIPVKDSAEFWSHAKSTGGKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKS GTLTYQMMFELRDLGISTAIGIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDA EERAAEYIKAHVTKPVVAYVAGFTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVK VGKTPTETANLLREVFAAL" misc_feature complement(2748679..2749098) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /inference="protein motif:HMMPfam:PF00549" /note="HMMPfam hit to PF00549, ATP-citrate lyase/succinyl-CoA ligase, score 3.5e-37" misc_feature complement(2748754..2748795) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /note="PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site." misc_feature complement(2748958..2749041) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /note="PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1." misc_feature complement(2749096..2749119) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2749144..2749167) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2749156..2749503) /gene="sucD" /locus_tag="CMS_2595" /old_locus_tag="CMS2595" /inference="protein motif:HMMPfam:PF02629" /note="HMMPfam hit to PF02629, CoA-binding, score 1.5e-49" gene complement(2749539..2750711) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /db_xref="GeneID:6159001" CDS complement(2749539..2750711) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /EC_number="6.2.1.5" /note="catalyzes the interconversion of succinyl-CoA and succinate" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit beta" /protein_id="YP_001711250.1" /db_xref="GI:170782916" /db_xref="GeneID:6159001" /translation="MTRVDLFEYQARDLFESYGVPVLPGIVADTAEEVRAAAEKLGGT VVVKAQVKTGGRGKAGGVKVAQSAAAAYEAAEGILGLDIKGHTVHRVMVAAGARIAQE FYFSILLDRAERSYLCLASYEGGMEIEELAVTRPEALARIEIDPVAGIDAAKAEEIAR AASFPEELIAKVAPVFERLWWVYRDEDATLVEVNPLVLTESGDSIALDGKVTLDENAG FRHEGHAALEDAAAADPLEAKAKESDLNYVKLDGQVGIIGNGAGLVMSTLDVVSYAGE QHGGVRPANFLDIGGGASAEVMAAGLDVILGDEQVTSVFVNVFGGITSCDAVANGIVG ALDKLGDAATKPLVVRLDGNNVEEGRRILEERAHPLVTVVGTMDEAADKAAELAAA" misc_feature complement(2749557..2749991) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /inference="protein motif:HMMPfam:PF00549" /note="HMMPfam hit to PF00549, ATP-citrate lyase/succinyl-CoA ligase, score 1.6e-30" misc_feature complement(2749737..2749769) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature complement(2749884..2749958) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /note="PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3." misc_feature complement(2750133..2750618) /gene="sucC" /locus_tag="CMS_2596" /old_locus_tag="CMS2596" /inference="protein motif:HMMPfam:PF02222" /note="HMMPfam hit to PF02222, ATP-dependent carboxylate-amine ligase-like, ATP-grasp, score 3.2e-18" gene 2750950..2751771 /locus_tag="CMS_2597" /old_locus_tag="CMS2597" /db_xref="GeneID:6159000" CDS 2750950..2751771 /locus_tag="CMS_2597" /old_locus_tag="CMS2597" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711251.1" /db_xref="GI:170782917" /db_xref="GeneID:6159000" /translation="MRSRTHPARRPGGSIRDLAGEGILLAAGGRAILLQIADPSVARG VAEHSDFASRPLDRLEGTLGYVYAVVFGSSDEIARARRIVGRAHAPVRAASAAADGSA PAYSAYDPDLQLWVAATLYDSAVTMFELCFGRLPDEAADRVYREYAVLGTALQVPEGR WPADRAAFREYWEDRVATLEPTEDARRVARTLLGGRVGSPALRAVMPVVALVTAGLLP PRMRSGFGMRWDARLERRHARLLALILAVYRVLPRVVREAPRSVITRRYRRRDAG" gene 2751962..2752670 /locus_tag="CMS_2598" /old_locus_tag="CMS2598" /pseudo /db_xref="GeneID:6158162" misc_feature 2752542..2752610 /locus_tag="CMS_2598" /old_locus_tag="CMS2598" /note="1 probable transmembrane helix predicted for CMS2599 by TMHMM2.0 at aa 97-119" /pseudo gene complement(2752642..2755089) /locus_tag="CMS_2600" /old_locus_tag="CMS2600" /db_xref="GeneID:6158163" CDS complement(2752642..2755089) /locus_tag="CMS_2600" /old_locus_tag="CMS2600" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA helicase" /protein_id="YP_001711252.1" /db_xref="GI:170782918" /db_xref="GeneID:6158163" /translation="MSADPAALSPSSTPIILDGRSGADGGPGAPADPLLEGLNPEQRE AVVYRGPALLVVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFTNKAAAEMRERV ESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIKQLDA DTLGFTVSSVSGRISKLKNELSDADTFARTANFNDPAEAMFVEIFRQYTRSLAAANAF DFDDLIGQTVYLFRAFPKVAALYQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDV PVDTRMSTNGMGGIDGASLTVVGDSDQSIYAFRGADIRNITEFERDFPQSKVVLLEQN YRSTQNILTAANAVISNNFDRKDKKLWTSIGDGDKIVGFTGYSGHDEAQFVADEIQKL HEEGTAYSEIAVFYRTNAQTRALEEILIRSAVPYRIMGGTKFYERAEIKDAMAYLVAV ANPADVLALRRILNTPKRGIGPATETALANFAESHGVTFREAMRRASELGLGPKVTQA ILTLSRMLDEVALLLDPERPEGRTSVSDLVTTLLKRSGLVQALRASKDAQDEARAENV EELVAVTKEFSRNNPEGQLVDFLTEVSLVAAADELDDSNGTVSLMTLHTAKGLEYDSV FLTGVEEDLLPHRMSANEPGGPAEERRLFYVGITRARRRLFISLAMTRAQFGEVNVAM PSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNARREGGGYGGRSRSSSGFEDPALP PPRPKTQWANTVTGQVRDNGDLELAFGDRIRHTDFGDGRVTGVAGEGRKRIAEVQFDG PAGRKRLLIKIAPIEKL" misc_feature complement(2753449..2754978) /locus_tag="CMS_2600" /old_locus_tag="CMS2600" /inference="protein motif:HMMPfam:PF00580" /note="HMMPfam hit to PF00580, UvrD/REP helicase, score 3.8e-189" misc_feature complement(2754898..2754921) /locus_tag="CMS_2600" /old_locus_tag="CMS2600" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2755416..2756378 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /db_xref="GeneID:6158164" CDS 2755416..2756378 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711253.1" /db_xref="GI:170782919" /db_xref="GeneID:6158164" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 2755488..2755553 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" misc_feature 2755553..2755674 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature 2755674..2755739 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature 2755824..2756366 /locus_tag="CMS_2601" /old_locus_tag="CMS2601" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(2756422..2757255) /locus_tag="CMS_2602" /old_locus_tag="CMS2602" /db_xref="GeneID:6158165" CDS complement(2756422..2757255) /locus_tag="CMS_2602" /old_locus_tag="CMS2602" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711254.1" /db_xref="GI:170782920" /db_xref="GeneID:6158165" /translation="MDDDRLCVRHGGARRGSGARSAHHGRTPLDPQEPMSPPIRLLHQ TVRPFVAAGLRGGLPTPLTATVPTDAPVGVVPGPDPDRVLALGGIGGSGVGLRTHAEG VAAQSAKALAAITGRGVEWRTVPLADQHLTATQEAVRQITELHRYDVVLVMPGVADAL ELARLTPWVHRLEDLLDHLVEQTADNSMVLVSDVPQVSQYVEAGAFVRGLFRDHAMYL SERKAEVCARFPQVTSVKLPDAGPVDFEGGEFRYASMYRRWGEHVGRVIADLQAERGG A" gene 2757303..2757623 /locus_tag="CMS_2603" /old_locus_tag="CMS2603" /db_xref="GeneID:6158166" CDS 2757303..2757623 /locus_tag="CMS_2603" /old_locus_tag="CMS2603" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711255.1" /db_xref="GI:170782921" /db_xref="GeneID:6158166" /translation="MTREPEPLIHHPHARFHQGAWRVQVASQPVLGYVVPTVRAPGAA TVFEVYADAVDDSGRRVWVSTAVTLEAAVAWMREHDMELLSFAGEHARRRRELATGMM PTHY" gene complement(2757648..2758544) /gene="ubiA" /locus_tag="CMS_2604" /old_locus_tag="CMS2604" /db_xref="GeneID:6158167" CDS complement(2757648..2758544) /gene="ubiA" /locus_tag="CMS_2604" /old_locus_tag="CMS2604" /note="UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin" /codon_start=1 /transl_table=11 /product="prenyltransferase" /protein_id="YP_001711256.1" /db_xref="GI:170782922" /db_xref="GeneID:6158167" /translation="MSDVRARPGAAEMLRTVALSSRPLSWVNTAFPFAAAYLTVTREL DLTAVLGTLYFLIPYNLAMYGINDVFDYESDMRNPRKGGVEGAVLARAMHRPVLLAVL VTNVPFLVYLVIVGSAASIAVLAVSVFAVIAYSLKGLRFKERPVLDSLTSSTHFTSPA VYGIVLAGGAFTPALWAILAAFFLWGVASHAFGAVQDIVADREGGISSIATVLGGAVT VRIAVLAYAAAGVAMLFTGLPGIIAAVLVIPYILSTAPFWSIRDEDAGAANRGWRRFL GLNFLSGFVVTMLLIAYWLTTA" misc_feature complement(order(2757654..2757722,2757783..2757851, 2757861..2757929,2757990..2758058,2758149..2758253)) /gene="ubiA" /locus_tag="CMS_2604" /old_locus_tag="CMS2604" /note="5 probable transmembrane helices predicted for CMS2604 by TMHMM2.0 at aa 98-132, 163-185, 206-228,232-254 and 275-297" misc_feature complement(2757663..2758481) /gene="ubiA" /locus_tag="CMS_2604" /old_locus_tag="CMS2604" /inference="protein motif:HMMPfam:PF01040" /note="HMMPfam hit to PF01040, UbiA prenyltransferase,score 6.2e-12" gene complement(2758537..2758905) /locus_tag="CMS_2605" /old_locus_tag="CMS2605" /db_xref="GeneID:6158168" CDS complement(2758537..2758905) /locus_tag="CMS_2605" /old_locus_tag="CMS2605" /codon_start=1 /transl_table=11 /product="c50 carotenoid epsilon cyclase" /protein_id="YP_001711257.1" /db_xref="GI:170782923" /db_xref="GeneID:6158168" /translation="MSYLVLDLLFLIPVAVVGFLFRRLLLREANAVPYGSSRFDYPEY YWYRRMPVAILLVMTLIFDNIMIKVGLVGYDEDKLVGLILGYAPIEDFAYAIAALVLL PAVWYLLRRRRSVSGIEAHE" misc_feature complement(order(2758579..2758647,2758705..2758773, 2758828..2758896)) /locus_tag="CMS_2605" /old_locus_tag="CMS2605" /note="3 probable transmembrane helices predicted for CMS2605 by TMHMM2.0 at aa 4-26, 45-67 and 87-109" gene complement(2758902..2759246) /locus_tag="CMS_2606" /old_locus_tag="CMS2606" /db_xref="GeneID:6158169" CDS complement(2758902..2759246) /locus_tag="CMS_2606" /old_locus_tag="CMS2606" /codon_start=1 /transl_table=11 /product="c50 carotenoid epsilon cyclase" /protein_id="YP_001711258.1" /db_xref="GI:170782924" /db_xref="GeneID:6158169" /translation="MRLVYLVLLLGALGCMMLVDRRWRLFFWRDRTAAAGTLLIGVAF FLLWDIAGISQGIFFRGETPFMTGILVGPELPLEEVFFLTLLCYLTMNLVNGFSRLAD HHVGRARERANR" misc_feature complement(order(2758956..2759024,2759067..2759135, 2759169..2759237)) /locus_tag="CMS_2606" /old_locus_tag="CMS2606" /note="3 probable transmembrane helices predicted for CMS2606 by TMHMM2.0 at aa 4-26, 38-60 and 75-97" gene complement(2759246..2761891) /locus_tag="CMS_2607" /old_locus_tag="CMS2607" /db_xref="GeneID:6158170" CDS complement(2759246..2761891) /locus_tag="CMS_2607" /old_locus_tag="CMS2607" /codon_start=1 /transl_table=11 /product="bifunctional enzyme phytoene desaturase/synthetase" /protein_id="YP_001711259.1" /db_xref="GI:170782925" /db_xref="GeneID:6158170" /translation="MTRRLPGRRPAAPQAPTGLEKYDRVAQETASVVIRRYSTSFGLA SRLLGPDVRQHIENVYALVRVADEIVDGAAAGAGVDPAHVEALLDALEQETEDAMLRG YSTNLVVHAFAITARRAGFGAELTAPFFASMRMDLRRMEHTPASFTEYVYGSAEVVGL MCLRAFLVGHATTRPERIRFEEGAKRLGAAFQKVNFLRDLAADHGALGRSYFPGVDVA TFSEADKERILDDIDHDLRVSGAVIPDLPASSRRAVALAQGLFAELAVRLRDTPASEL VRTRVRVPDPVKARIALAAASGAEPSGVDGRLVRRSRGPRAHAARPTPAARPAPTDPG PSESAPTDPEQQESAMTAPTAIVIGGGIAGLASASLLARDGYRVTLVEGRDEVGGRAG SWEKDGFRFDLGPSWYLMPEVFDHFFQLMGTSAAEQLDLVRLPGYRVLFEGDPDPIDI RDSREANLDLFESVEPGSRPAMARYLDSAKDVYEVAKKRFLYTTFSDYRPLLKRDVVT RTGTLAKLLLTPLETHVARYVKDRRLRQILGYPAVFLGSSPKLAPSMYHLMSHLDLED GVLYPQGGLITVIDAIEGVARAEGVEIRTGAPVSRILTEPTKAGKARARGVQITTDAG TETLEADVVVSTADLHHTETELIPEAFRTYPQSYWDKATVGPGAVLVYLGVKGGLPEL HHHTLLFTEDWDENFSRIFPPKGGSTSVPDPASIYVCKPSATDSSVSPDGYENVFILV PIPADPTIGRGGIDGAGDARVEEIADRAIQQISDWAGIPDLAERIVLRRTSGPGDFAA DLHSWKGTILGPAHTLTQSAMFRAGNTSKKVDGLHYAGGSTIPGIGLPMCLISAEILV KRLRGDTSTGPGAVPLVRTVGRPVA" misc_feature complement(2759312..2760808) /locus_tag="CMS_2607" /old_locus_tag="CMS2607" /inference="protein motif:HMMPfam:PF01593" /note="HMMPfam hit to PF01593, Amine oxidase, score 1.2e-21" misc_feature complement(2760989..2761792) /locus_tag="CMS_2607" /old_locus_tag="CMS2607" /inference="protein motif:HMMPfam:PF00494" /note="HMMPfam hit to PF00494, Squalene/phytoene synthase,score 2.4e-10" misc_feature complement(2761253..2761333) /locus_tag="CMS_2607" /old_locus_tag="CMS2607" /note="PS01045 Squalene and phytoene synthases signature 2." gene complement(2761888..2762910) /locus_tag="CMS_2608" /old_locus_tag="CMS2608" /db_xref="GeneID:6158171" CDS complement(2761888..2762910) /locus_tag="CMS_2608" /old_locus_tag="CMS2608" /codon_start=1 /transl_table=11 /product="geranylgeranyl pyrophosphate synthase" /protein_id="YP_001711260.1" /db_xref="GI:170782926" /db_xref="GeneID:6158171" /translation="MNGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRM VMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIAT TQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAA GELIDVEFSLTADVPSVDEILRMERLKTAVYSFEAPLQAGAVLAGARPEVVAALGDFD RDIGIAYQVVDDVLGVFGDEQETGKTNLGDLREGKRTVLIAHAVRSSEWGEISALVGK DDLSRGEAALVRSVLESSGARAYAEGVARDLAVAAVARLDDPVVPEALRRELAPVAES VLGRIR" misc_feature complement(2762008..2762838) /locus_tag="CMS_2608" /old_locus_tag="CMS2608" /inference="protein motif:HMMPfam:PF00348" /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score 2.3e-30" misc_feature complement(2762212..2762250) /locus_tag="CMS_2608" /old_locus_tag="CMS2608" /note="PS00444 Polyprenyl synthetases signature 2." misc_feature complement(2762644..2762688) /locus_tag="CMS_2608" /old_locus_tag="CMS2608" /note="PS00723 Polyprenyl synthetases signature 1." gene 2763003..2763575 /gene="idi" /locus_tag="CMS_2609" /old_locus_tag="CMS2609" /db_xref="GeneID:6158172" CDS 2763003..2763575 /gene="idi" /locus_tag="CMS_2609" /old_locus_tag="CMS2609" /EC_number="5.3.3.2" /note="catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate" /codon_start=1 /transl_table=11 /product="isopentenyl-diphosphate delta-isomerase" /protein_id="YP_001711261.1" /db_xref="GI:170782927" /db_xref="GeneID:6158172" /translation="MPQHTELVVLLDDDGETIGTAPKATVHTRDTALHLAFSCHVFDA EGRILVTRRAIGKLTWPGVWTNSFCGHPAPDEDMLEAVHRRAEQELGLTLESVELVLP DFRYRATDAAGVVENEICPVFRAVAATPVDPRPEEVGEYQWVDPEQLIPAVAHTPWAF SPWLTLQLPLLYPEHAAHAGLADAAAVPAA" misc_feature 2763099..2763512 /gene="idi" /locus_tag="CMS_2609" /old_locus_tag="CMS2609" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 7.2e-17" gene 2763745..2765037 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /db_xref="GeneID:6158763" CDS 2763745..2765037 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001711262.1" /db_xref="GI:170782928" /db_xref="GeneID:6158763" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATVTGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 2763793..2763816 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2763871..2763936 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /note="Predicted helix-turn-helix motif with score 1119.000, SD 3.00 at aa 43-64, sequence MSRRVAASRVGVHERTAQDWDR" misc_feature 2764558..2765016 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature 2764855..2764905 /locus_tag="CMS_2610" /old_locus_tag="CMS2610" /note="PS01043 Transposases, IS30 family, signature." gene complement(2765107..2766846) /locus_tag="CMS_2611" /old_locus_tag="CMS2611" /db_xref="GeneID:6158173" CDS complement(2765107..2766846) /locus_tag="CMS_2611" /old_locus_tag="CMS2611" /codon_start=1 /transl_table=11 /product="alpha-glucosidase" /protein_id="YP_001711263.1" /db_xref="GI:170782929" /db_xref="GeneID:6158173" /translation="MTPPSPTAPSPAARDDISTHPDSTPQHGTGSEWWRTAVIYQIYP RSFADSDGDGIGDLPGITERLPALRELGVDAVWLSPFYLSPQNDAGYDVADYCDVDPL FGTLDDFDRLQRRAHELGLRVIVDIVPNHTSSAHRWFQEAIATPVGSEERARYMLRDG KGADGELPPNNWESIFGGPAWTRLTEPDGTPGQWYLHLFDSSQPDLDWTNPWVRERFR EILRFWLDRGVDGFRVDVAHGMVKAPGLPDYTPPEGQGSMGGAGGVDDQPAPPPPYFA QEGVHEIYREWREIFDSYEGDRAMVAEAWVEPLAKLADWVRPDEMHQAFNFSYLETPW DAAALRRTIDASLATFSSVGAPSTWVLSNHDVVRHASRLALSGENPQGVGIGPESTVT VDEELGLRRARAASALMLALPGSAYIYQGEELGLPEDTRLPDSARQDPTFHRTAGERY GRDGCRVPIPWEAGKPSYGFSDGDASWLPQPDDWDRFARDTEQADPASTLSLYTEALL LRREHGLALGALEWIAAEGDDVIAFESAGVTVIANLGESAVPLPEGRVLLASRPLDGD AVPSDTTVWLIRE" misc_feature complement(2765479..2766726) /locus_tag="CMS_2611" /old_locus_tag="CMS2611" /inference="protein motif:HMMPfam:PF00128" /note="HMMPfam hit to PF00128, Alpha amylase, catalytic region, score 1.7e-85" gene 2767007..2767945 /locus_tag="CMS_2612" /old_locus_tag="CMS2612" /db_xref="GeneID:6158174" CDS 2767007..2767945 /locus_tag="CMS_2612" /old_locus_tag="CMS2612" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711264.1" /db_xref="GI:170782930" /db_xref="GeneID:6158174" /translation="MTDPARVPLGSSGLEVLPLSFGGNVFGWTADEATSFQLLDAYTA AGGNFIDTADVYSAWKPGNSGGESEEIIGRWLASRGRPDDLVIATKVGAHEAAKGTSR DSVRRGVEASLRRLGVDAIDLYYAHVDDQDTPIEETVTALAELVAEGKVRAIGASNFT AERLQAALDVSAREGIARFEVLQNRYNLVARDDYEGELVDLLIREGIASAPYSSLASG FLTGKYRGADVDSPRAGAASKYYDDHGRALLEVLDRVADAHGVSVTTVSLAWLRAQPS VTAPIASARDLTQLPDLLASVDLELTADEIRDLSAV" misc_feature 2767034..2767939 /locus_tag="CMS_2612" /old_locus_tag="CMS2612" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 1.2e-58" gene 2768060..2768131 /locus_tag="CMS_r033" /old_locus_tag="CMSr033" /db_xref="GeneID:6158175" tRNA 2768060..2768131 /locus_tag="CMS_r033" /old_locus_tag="CMSr033" /product="tRNA-Thr" /db_xref="GeneID:6158175" gene 2768170..2768243 /locus_tag="CMS_r034" /old_locus_tag="CMSr034" /db_xref="GeneID:6159064" tRNA 2768170..2768243 /locus_tag="CMS_r034" /old_locus_tag="CMSr034" /product="tRNA-Met" /db_xref="GeneID:6159064" gene 2768449..2768640 /locus_tag="CMS_2613" /old_locus_tag="CMS2613" /db_xref="GeneID:6159053" CDS 2768449..2768640 /locus_tag="CMS_2613" /old_locus_tag="CMS2613" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711265.1" /db_xref="GI:170782931" /db_xref="GeneID:6159053" /translation="MTHHESPDHPDHASGAEHDDVLYKTQGNPVPDAHDEERREAPAG GDYTASESEEEKEAREGGA" misc_feature 2769021..2769107 /note="similar to hypothetical protein" gene 2769246..2769689 /locus_tag="CMS_2615" /old_locus_tag="CMS2615" /db_xref="GeneID:6158177" CDS 2769246..2769689 /locus_tag="CMS_2615" /old_locus_tag="CMS2615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711267.1" /db_xref="GI:170782933" /db_xref="GeneID:6158177" /translation="MNPELQGRVLPAAAPYLVGREKVREFARAVGATHPVHLDPEAAR AAGHADVVAPSTFPVVVQEATLAQLLAEPDAGIDFSRVVHGEQAFTYSRPVVAGDELT ATLTVTKVATLGGNAMVTAESAMVDASGAHVVTAVSTLVVRGDDA" misc_feature 2769252..2769686 /locus_tag="CMS_2615" /old_locus_tag="CMS2615" /inference="protein motif:HMMPfam:PF05921" /note="HMMPfam hit to PF05921, Actinomycete protein of unknown function DUF875, score 1.5e-37" gene 2769737..2770120 /locus_tag="CMS_2616" /old_locus_tag="CMS2616" /db_xref="GeneID:6158178" CDS 2769737..2770120 /locus_tag="CMS_2616" /old_locus_tag="CMS2616" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711268.1" /db_xref="GI:170782934" /db_xref="GeneID:6158178" /translation="MAERSVHLTRDSLVRYAGASGDFNPIHYRDDVAASVGLPGVLAH GMLTMGQAVQPVADWAGDPSRVVSYGVRFTRPVVVDPADGQDLTVVAKIGAIDAEAGT VRIDIAVSVDGKTVLGRAQAQVRLA" misc_feature 2769737..2770081 /locus_tag="CMS_2616" /old_locus_tag="CMS2616" /inference="protein motif:HMMPfam:PF01575" /note="HMMPfam hit to PF01575, MaoC-like dehydratase,score 1.9e-14" misc_feature 2769860..2769892 /locus_tag="CMS_2616" /old_locus_tag="CMS2616" /note="PS00639 Eukaryotic thiol (cysteine) proteases histidine active site." misc_feature 2770058..2770081 /locus_tag="CMS_2616" /old_locus_tag="CMS2616" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2770127..2771281 /gene="murB" /locus_tag="CMS_2617" /old_locus_tag="CMS2617" /db_xref="GeneID:6158179" CDS 2770127..2771281 /gene="murB" /locus_tag="CMS_2617" /old_locus_tag="CMS2617" /EC_number="1.1.1.158" /note="catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis" /codon_start=1 /transl_table=11 /product="UDP-N-acetylenolpyruvoylglucosamine reductase" /protein_id="YP_001711269.1" /db_xref="GI:170782935" /db_xref="GeneID:6158179" /translation="MTIETHRDAPLADLTTLRVGGPAEELVTVSERDELVDTLLGLWA VGEDWMVLGGGSNSLISDEGVAGTVIRIATRGVEIGEERADGTVLVRVQAGEPWDALV ARTVADGLAGLEALSGIPGSTGTSPVQNIGAYGQEVADVLEGVDFLDYETGEVERLGA ADLGLGYRTSALKRGRVGVVLSVDFALTRGEGPDALGLPVAYPQLAGALGVELGDRVP VARVRETVLALRASKGMVLDDADPDTWSAGSFFTNPIVSAAFARTLPADAPRWPQEDP LRDLVVPLGDQWEVAEAIEREAAARRRREPAAVKLSAAWLIEHSGVHRGFRLPGSGAA VSSKHTLALTNRGTATAEDVAALARYVQGRVMSEHGVILQPEPVLVGLSL" misc_feature 2770193..2770705 /gene="murB" /locus_tag="CMS_2617" /old_locus_tag="CMS2617" /inference="protein motif:HMMPfam:PF01565" /note="HMMPfam hit to PF01565, FAD linked oxidase,N-terminal, score 0.00015" misc_feature 2770781..2771269 /gene="murB" /locus_tag="CMS_2617" /old_locus_tag="CMS2617" /inference="protein motif:HMMPfam:PF02873" /note="HMMPfam hit to PF02873,UDP-N-acetylenolpyruvoylglucosamine reductase, score 8.4e-23" misc_feature 2771393..2773202 /note="submitted with no further information" gene complement(2773267..2774484) /gene="aspC" /locus_tag="CMS_2621" /old_locus_tag="CMS2621" /db_xref="GeneID:6158829" CDS complement(2773267..2774484) /gene="aspC" /locus_tag="CMS_2621" /old_locus_tag="CMS2621" /EC_number="2.6.1.1" /note="catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="YP_001711270.1" /db_xref="GI:170782936" /db_xref="GeneID:6158829" /translation="MAEPQSTVPLSRVSTRIGSIAESATLKVDGKAKALQAAGRPVIS FAAGEPDFPTPDYVVEAAVEAARDPRNHRYTAAAGLPDLREAIAEKTRVSSGLDVGID RIIVTNGGKQAVYQAFQTLLDDGDEVLVPTPYWTTYPEAIRLAGGVPVDVFAGADQGY LVTVEQLEAAWTPRTKVLLFVSPSNPTGAVHSREQTREIGEWAESKGLWVISDEIYQD LVYDGAEAASIVDVVPALADRTILVNGVAKTYAMTGWRVGWMVGPADAIKAAGNLQSH LSSNVSNLSQRAAIAALRGPRDTVDRMREAFDRRRRTIVAELDAIPGFVTPTPQGAFY VYPDVTGLFGRDIDGVTPTTSLEVADVLLEKAEVAAVPGEAFGPSGFLRFSYALGDDA LLEGVRRIRDLLA" misc_feature complement(2773273..2774229) /gene="aspC" /locus_tag="CMS_2621" /old_locus_tag="CMS2621" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 3.7e-62" misc_feature complement(2773711..2773752) /gene="aspC" /locus_tag="CMS_2621" /old_locus_tag="CMS2621" /note="PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site." gene 2774674..2774746 /locus_tag="CMS_r2621" /db_xref="GeneID:6158614" tRNA 2774674..2774746 /locus_tag="CMS_r2621" /product="tRNA-Trp" /db_xref="GeneID:6158614" gene 2774834..2775106 /gene="secE" /locus_tag="CMS_2622" /old_locus_tag="CMS2622" /db_xref="GeneID:6159066" CDS 2774834..2775106 /gene="secE" /locus_tag="CMS_2622" /old_locus_tag="CMS2622" /note="forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecE" /protein_id="YP_001711271.1" /db_xref="GI:170782937" /db_xref="GeneID:6159066" /translation="MARKIVDEPSEEIVAQAREQRDARRNPFARLVLFIKQVVQELKK VVTPTRKELLTFTGVVLAFVIVMMVIVSLLDQLFGYLAIVVFGNGA" misc_feature 2774921..2775091 /gene="secE" /locus_tag="CMS_2622" /old_locus_tag="CMS2622" /inference="protein motif:HMMPfam:PF00584" /note="HMMPfam hit to PF00584, Protein secE/sec61-gamma protein, score 1.8e-17" misc_feature 2774987..2775055 /gene="secE" /locus_tag="CMS_2622" /old_locus_tag="CMS2622" /note="1 probable transmembrane helix predicted for CMS2622 by TMHMM2.0 at aa 52-74" gene 2775292..2776329 /gene="nusG" /locus_tag="CMS_2623" /old_locus_tag="CMS2623" /db_xref="GeneID:6158983" CDS 2775292..2776329 /gene="nusG" /locus_tag="CMS_2623" /old_locus_tag="CMS2623" /codon_start=1 /transl_table=11 /product="transcription antitermination protein" /protein_id="YP_001711272.1" /db_xref="GI:170782938" /db_xref="GeneID:6158983" /translation="MAESKRDDVDLAPAAEQSSEVDAVQEGHSIESSEESSDAAEHTA LHVEGDSVETDLTAALDAMESVDDPEADAIVEDALDIDSPDEAEAAVEATDDEAEEEA AEEALEPADVTPATADDIAEAEADLVPDEDASAEDAAEVDPYEEFRKELRSKPGKWYV IHSYAGFERRVKSNIENRMVSLNMEDDIYQIEVPMEDVVEIKNGQRKMVNRVRIPGYV LVRMALNEDSWSVVRHTPGVTGFVGNAHNPTPLRFEEAFSMLKSLVEIKEVAQVKGQP TKGGQAQRVVAAEVDFEIGETITIKEGSFAGLPGSISEIKPESGKLTVLVSLFERETP VELSFDQVTKL" misc_feature 2775754..2775885 /gene="nusG" /locus_tag="CMS_2623" /old_locus_tag="CMS2623" /inference="protein motif:HMMPfam:PF02357" /note="HMMPfam hit to PF02357, Bacterial transcription antitermination protein NusG, score 1e-18" misc_feature 2776165..2776278 /gene="nusG" /locus_tag="CMS_2623" /old_locus_tag="CMS2623" /inference="protein motif:HMMPfam:PF00467" /note="HMMPfam hit to PF00467, KOW, score 3.3e-06" gene 2776383..2776814 /gene="rplK" /locus_tag="CMS_2624" /old_locus_tag="CMS2624" /db_xref="GeneID:6158845" CDS 2776383..2776814 /gene="rplK" /locus_tag="CMS_2624" /old_locus_tag="CMS2624" /note="binds directly to 23S ribosomal RNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L11" /protein_id="YP_001711273.1" /db_xref="GI:170782939" /db_xref="GeneID:6158845" /translation="MAPKKKVTGLIKLQIKAGAANPAPPIGPALGQHGVNIMEFCKAY NAQTESQRGNVIPVEITVYEDRTFTFILKTPPAAELIKKAAGVAKGSGTPHTVKVAKL TMDQVREIAEQKQADLNANDIDAAAKIIAGTARSMGITVEA" misc_feature 2776410..2776586 /gene="rplK" /locus_tag="CMS_2624" /old_locus_tag="CMS2624" /inference="protein motif:HMMPfam:PF03946" /note="HMMPfam hit to PF03946, Ribosomal protein L11,score 2.5e-36" misc_feature 2776599..2776805 /gene="rplK" /locus_tag="CMS_2624" /old_locus_tag="CMS2624" /inference="protein motif:HMMPfam:PF00298" /note="HMMPfam hit to PF00298, Ribosomal protein L11,score 2.3e-36" misc_feature 2776764..2776808 /gene="rplK" /locus_tag="CMS_2624" /old_locus_tag="CMS2624" /note="PS00359 Ribosomal protein L11 signature." gene 2776914..2777600 /gene="rplA" /locus_tag="CMS_2625" /old_locus_tag="CMS2625" /db_xref="GeneID:6158947" CDS 2776914..2777600 /gene="rplA" /locus_tag="CMS_2625" /old_locus_tag="CMS2625" /note="in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L1" /protein_id="YP_001711274.1" /db_xref="GI:170782940" /db_xref="GeneID:6158947" /translation="MAKSKAYRAAAEKIDLTKAYTASEAVELARETGSSKFDSTVEVA LKLGVDPRKADQMVRGTVILPHGTGKTARVIVFATGPAAEAAIAAGADEVGGDELIEK VAGGYTSFDSAVSTPELMGKVGRLGKVLGPRGLMPNPKTGTVTPDVARAVSDIKGGKI EFRVDKHANVHFVVGKASFSPEQLSENVGAALEEIVRLKPSSSKGRYVQKATVSTTFG PGIPVDVNSI" misc_feature 2776953..2777573 /gene="rplA" /locus_tag="CMS_2625" /old_locus_tag="CMS2625" /inference="protein motif:HMMPfam:PF00687" /note="HMMPfam hit to PF00687, Ribosomal protein L1, score 4.5e-108" misc_feature 2777271..2777327 /gene="rplA" /locus_tag="CMS_2625" /old_locus_tag="CMS2625" /note="PS01199 Ribosomal protein L1 signature." gene 2777753..2778304 /locus_tag="CMS_2626" /old_locus_tag="CMS2626" /db_xref="GeneID:6158945" CDS 2777753..2778304 /locus_tag="CMS_2626" /old_locus_tag="CMS2626" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711275.1" /db_xref="GI:170782941" /db_xref="GeneID:6158945" /translation="MAVPADADAVAALAARTFALACPPTTTAEAIAEHIRTVLSPARF RAHLADPAHRVVLAEVGGEMVGYTMVVAAPPADADVAGVLRLRPEVELSKVYVEAGSH GVGVARPLMAETLRVARELAGERGLDGEAGIWLGVNEHNSRAIRFYERSGFRIVGTRS FRLSDAVETDHVMEQALAATAGE" sig_peptide 2777753..2777842 /locus_tag="CMS_2626" /old_locus_tag="CMS2626" /note="Signal peptide predicted for CMS2626 by SignalP 2.0 HMM (Signal peptide probability 0.846) with cleavage site probability 0.676 between residues 30 and 31" misc_feature 2777918..2778214 /locus_tag="CMS_2626" /old_locus_tag="CMS2626" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.4e-10" gene complement(2778316..2779272) /locus_tag="CMS_2627" /old_locus_tag="CMS2627" /db_xref="GeneID:6158180" CDS complement(2778316..2779272) /locus_tag="CMS_2627" /old_locus_tag="CMS2627" /codon_start=1 /transl_table=11 /product="putative zinc-binding oxidoreductase" /protein_id="YP_001711276.1" /db_xref="GI:170782942" /db_xref="GeneID:6158180" /translation="MRAVVVAETGGPDVLHLADVPVPHRLDSEVLVKVVAAGVNPIDL RLRAGESGGPTLGALPAVLGRDFSGVVVESPYEDHALHPGDEVFGLAMVPRMPGSYAP YIAVPSVSLARKPARLSHVEAAATPVSALTAWGMVVDIGRAHEGQVVLIHAGAGGVGH FAVQFARHFGARVVATGSPRNVDWLAELGADEVIDRTQVRFEDVLEDVDVVIDLVGNC TDDTGTRSLQVLRRDGLLVSAPVRGWPTLVQDAAAVGVRATHYEVAPDGQKLAVISRL LESGDIKVYVDEVFDLEDAAEAHRHMESGHARGKVVLNVSRG" misc_feature complement(2778328..2779245) /locus_tag="CMS_2627" /old_locus_tag="CMS2627" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 5.2e-59" gene complement(2779535..2779867) /locus_tag="CMS_2628" /old_locus_tag="CMS2628" /pseudo /db_xref="GeneID:6158181" gene complement(2779882..2780844) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /db_xref="GeneID:6158182" CDS complement(2779882..2780844) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /note="P/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711277.1" /db_xref="GI:170782943" /db_xref="GeneID:6158182" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTGNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2779894..2780436) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 2.5e-37" misc_feature complement(2780521..2780586) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2780586..2780707) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2780707..2780772) /locus_tag="CMS_2629" /old_locus_tag="CMS2629" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2781065..2781868) /locus_tag="CMS_2630" /old_locus_tag="CMS2630" /pseudo /db_xref="GeneID:6158183" misc_feature complement(2781146..2781472) /locus_tag="CMS_2630" /old_locus_tag="CMS2630" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 2e-05" /pseudo misc_feature complement(2781506..2781865) /locus_tag="CMS_2630" /old_locus_tag="CMS2630" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 2.1e-21" /pseudo gene complement(2782003..2782734) /locus_tag="CMS_2631" /old_locus_tag="CMS2631" /db_xref="GeneID:6158184" CDS complement(2782003..2782734) /locus_tag="CMS_2631" /old_locus_tag="CMS2631" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711278.1" /db_xref="GI:170782944" /db_xref="GeneID:6158184" /translation="MDIVVWNENVHESRGDATVLSHYPDGIHAVVADGLRELLGDDAR VSTATLQEDQHGLTEERLAATDVLYWWGHVAHGEVSDEVVARVIRHVHAGMGLVVLHS GHYSKVFTRLMGTTCSLKWRNDGERELVWTIAPQHPIAAGIPHPIVIDRQEMHGEQFD IPRPDEEVFLSTFAGGEVFRSGVAYHRGRGRVFYFSPGDQEYPVYHHPDIRRVLANAA RWVAPTDGRAELTADEHPRDWFLAR" misc_feature complement(2782009..2782734) /locus_tag="CMS_2631" /old_locus_tag="CMS2631" /inference="protein motif:HMMPfam:PF06283" /note="HMMPfam hit to PF06283, Protein of unknown function DUF1037, score 6.3e-123" gene 2782987..2783790 /locus_tag="CMS_2632" /old_locus_tag="CMS2632" /db_xref="GeneID:6158185" CDS 2782987..2783790 /locus_tag="CMS_2632" /old_locus_tag="CMS2632" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711279.1" /db_xref="GI:170782945" /db_xref="GeneID:6158185" /translation="MHAWSLDGTLGRPRVPGPDGSGPTTPGGRAAGALDLLDLPAELA RRGYRAVQITHFQLPTRDAGYLADLRASLAASGITLDAFLVDDGDLTHPADADLHERW ISAQLDDAEALGAHHARVVAGRSAPTPETLAASARRLSRLAAAHPGVAVVTENWREMM PDADAVLALLADAGDVRLLIDLGNWTQPHKHEQLARIAGHAVTCHAKAHRDEAGRLDD VDYARSLRVLQDAGYQGALAMVNESTRPDGSDEWDGLEQEHEVVRRVFG" gene complement(2783803..2785709) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /pseudo /db_xref="GeneID:6158186" misc_feature complement(2783944..2784498) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.3e-58" /pseudo misc_feature complement(2784121..2784165) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /note="PS00211 ABC transporters family signature." /pseudo misc_feature complement(2784454..2784477) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." /pseudo misc_feature complement(order(2784856..2784924,2785117..2785185)) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /note="2 probable transmembrane helices predicted for CMS2633 by TMHMM2.0 at aa 10-32 and 97-119" /pseudo misc_feature complement(order(2785410..2785478,2785515..2785583)) /locus_tag="CMS_2633" /old_locus_tag="CMS2633" /note="2 probable transmembrane helices predicted for CMS2634 by TMHMM2.0 at aa 50-72 and 85-107" /pseudo gene 2786124..2786891 /locus_tag="CMS_2635" /old_locus_tag="CMS2635" /db_xref="GeneID:6158187" CDS 2786124..2786891 /locus_tag="CMS_2635" /old_locus_tag="CMS2635" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711280.1" /db_xref="GI:170782946" /db_xref="GeneID:6158187" /translation="MATAADWIAHFHANADRHLSPEQLIPSGTPSPLDARTRRAFVRS FQRFALGESGDGVHLLRMATAAGDPAYTHALALLVQEEQKHAALFVRALDHLHAPALP AHWTDAAFTRLRHLIGLRTEISLFLIAETVATGYFHALADHAPDPALRALGQRIADDE LDHVRFQIDRLRTGFRDTPAPLRAVIGAAWTVVAAGAATVIVVDHRAALRACGVAPRA YWGRAMRGFGAAARSVLVDPRAPLLGPAGAADAPARA" gene complement(2786970..2788106) /locus_tag="CMS_2636" /old_locus_tag="CMS2636" /db_xref="GeneID:6158188" CDS complement(2786970..2788106) /locus_tag="CMS_2636" /old_locus_tag="CMS2636" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711281.1" /db_xref="GI:170782947" /db_xref="GeneID:6158188" /translation="MTGPASVSIPAPRVVFDDWMLDTVSGYHVYLSLDALPAEVDEPR YQYELNGSGTWQDMGGAAVGEGEAWAPASPGDHQVSFRVAGTVDGAFVTGTPTPRVLH RARGYVHESTPTAVVSGSRITFAWDVREALNGWPEEDGIGYTITGTPGWTPAPAVGSV TVDVGYDATITFWMEFGGGADFSRWGEVTATTGHAPSATQLLTSTPAPSIIGTAKVGN ILTVRTSTWEPKPVALSYQWNRNGNAIPGATNPTYTVVPADAGTQITISVTGAKAGFT SATKTSAATARVPQPIITGVAPTVSGVLKVGQTLTAKAGAWTPQPVTVTYQWKRNGVA IPGATATTYSLVAADKGATITVATTGAKAGYPSLVKTSAGKRIA" gene 2788141..2788578 /locus_tag="CMS_2637" /old_locus_tag="CMS2637" /db_xref="GeneID:6158189" CDS 2788141..2788578 /locus_tag="CMS_2637" /old_locus_tag="CMS2637" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711282.1" /db_xref="GI:170782948" /db_xref="GeneID:6158189" /translation="MYPDFEPVIVTVICLPTSAVRTAYVEAVAPETATPSDHHLKAKA VGAGVQEPVATVRVEPTVAEPEMTGAELEEKAMVAAACAGIAVPAAVVVPSAIAMARA IPRHVFVVAIIIASHSCESVSRRMNPHSGIARARPLFRGVLER" misc_feature 2788366..2788434 /locus_tag="CMS_2637" /old_locus_tag="CMS2637" /note="1 probable transmembrane helix predicted for CMS2637 by TMHMM2.0 at aa 76-98" gene complement(2788690..2788968) /locus_tag="CMS_2638" /old_locus_tag="CMS2638" /db_xref="GeneID:6158190" CDS complement(2788690..2788968) /locus_tag="CMS_2638" /old_locus_tag="CMS2638" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711283.1" /db_xref="GI:170782949" /db_xref="GeneID:6158190" /translation="MLGLIISLIVIGLIAGFIARAVVPGRQSMSILMTIVLGIVGSFV GGFLAFLLFQRDAMDGFFQPAGIIGSIIGAIIVLLIYVKVGGRKSVRR" misc_feature complement(2788711..2788866) /locus_tag="CMS_2638" /old_locus_tag="CMS2638" /inference="protein motif:HMMPfam:PF04226" /note="HMMPfam hit to PF04226, Transglycosylase-associated protein, score 4.4e-05" misc_feature complement(order(2788723..2788791,2788819..2788887, 2788900..2788968)) /locus_tag="CMS_2638" /old_locus_tag="CMS2638" /note="3 probable transmembrane helices predicted for CMS2638 by TMHMM2.0 at aa 22-44, 49-71 and 81-103" gene 2789050..2789754 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /db_xref="GeneID:6158191" CDS 2789050..2789754 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /codon_start=1 /transl_table=11 /product="putative two component response regulator" /protein_id="YP_001711284.1" /db_xref="GI:170782950" /db_xref="GeneID:6158191" /translation="MTTHPWGWDGGSMPAARTRPVTIALVDDYDVVLKGLAHMFDDYR DRVLVAEIDANAALSDEIDIVLYDSFAQPESDHHEIAELVRNPRARRVVVYTWNFQPE LIADARRQGVHGYLSKALPARELVEALERIHAGEELFNQAPLRAASAPSLDWPGKREG ITDRESEILALITQGKSNQEVAALTYLSPNTVKSYIRSIYRKIQVQSRTQAVIWGVGH GFSPDHHRIDHWLGGP" misc_feature 2789110..2789460 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 4.7e-05" misc_feature 2789521..2789694 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /inference="protein motif:HMMPfam:PF00196" /note="HMMPfam hit to PF00196, Bacterial regulatory protein, LuxR, score 5.4e-17" misc_feature 2789557..2789580 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 2789572..2789655 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /note="PS00622 Bacterial regulatory proteins, luxR family signature." misc_feature 2789575..2789640 /locus_tag="CMS_2639" /old_locus_tag="CMS2639" /note="Predicted helix-turn-helix motif with score 1468.000, SD 4.19 at aa 176-197, sequence KSNQEVAALTYLSPNTVKSYIR" gene complement(2789799..2789972) /locus_tag="CMS_2640" /old_locus_tag="CMS2640" /db_xref="GeneID:6158192" CDS complement(2789799..2789972) /locus_tag="CMS_2640" /old_locus_tag="CMS2640" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711285.1" /db_xref="GI:170782951" /db_xref="GeneID:6158192" /translation="MASGQDRSASEVGRTGLRDMEDQEPRLEALRLALVAGEESGEAA PFDLDTFIADKRA" misc_feature complement(2789802..2789972) /locus_tag="CMS_2640" /old_locus_tag="CMS2640" /inference="protein motif:HMMPfam:PF03693" /note="HMMPfam hit to PF03693, Protein of unknown function UPF0156, bacterial, score 1.1e-08" gene complement(2789979..2790761) /locus_tag="CMS_2641" /old_locus_tag="CMS2641" /db_xref="GeneID:6158193" CDS complement(2789979..2790761) /locus_tag="CMS_2641" /old_locus_tag="CMS2641" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711286.1" /db_xref="GI:170782952" /db_xref="GeneID:6158193" /translation="MRRRPTFRTWDDYFIPGTTVLRNKLTGPGKPHGETDSDKLRVSE EDIARVRLAELYRQPIDGHFDYPHMKAIHRHIFQDVYDWAGEERVAPVGSFMSKDGHS YYPAGPTLTEAAEAQYRQLADKDLLRGLDQREFVHELAESWGELNVIHSFREGNTRTQ FVFFSQLAEQAGYRIESSRFAVGSPLREQFVEARFHSQDTGSNARLEEVLGRAVVPLP RPTSPGTTRPEGPSPSRAVHGVARPGPVAGGRVGGRDSGYGR" misc_feature complement(2790162..2790557) /locus_tag="CMS_2641" /old_locus_tag="CMS2641" /inference="protein motif:HMMPfam:PF02661" /note="HMMPfam hit to PF02661, Filamentation induced by cAMP protein Fic, score 7.8e-08" gene 2791142..2792215 /locus_tag="CMS_2642" /old_locus_tag="CMS2642" /db_xref="GeneID:6158194" CDS 2791142..2792215 /locus_tag="CMS_2642" /old_locus_tag="CMS2642" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711287.1" /db_xref="GI:170782953" /db_xref="GeneID:6158194" /translation="MTRMIPSTSSRFRKSVPKAEAGDRAAVLSPAFAAPGMAPVVHVQ AMRRLQEATGLIPVEYPTTRRLGASAEDRAADITAAFADDSIRAIVSTVGGDDQVTVI PHVDIEELARNPKPFLGYSDNTNLHNLLAGLGIPSFYGGSTQVHLGAGPGIDDVHLRS LRAALIEGGELEITEPGESEDHGIDWTDPRALTEHGERTATEPWKWAGPAATVEGPTW GGCIEVIDQIAMAGRMPDLDRLEGGILLLETSEEVPSAASVKRWVRGLGERGILDVVA GVLVARPVTIVMGAPVPSPEERARLRAEQRDTVIEQIARYNPRAVVCVGVPFGHTRPQ WILPHGGTVRLDGAAKTVHADYS" misc_feature 2791412..2791627 /locus_tag="CMS_2642" /old_locus_tag="CMS2642" /inference="protein motif:HMMPfam:PF02016" /note="HMMPfam hit to PF02016, Peptidase U61,LD-carboxypeptidase A, score 2.1e-06" misc_feature 2792231..2794229 /note="submitted with no further information" gene complement(2792254..2792856) /locus_tag="CMS_2643" /old_locus_tag="CMS2643" /db_xref="GeneID:6158195" CDS complement(2792254..2792856) /locus_tag="CMS_2643" /old_locus_tag="CMS2643" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711288.1" /db_xref="GI:170782954" /db_xref="GeneID:6158195" /translation="MIGDALLRQGKYAEAVALYRQAAAADDPDAEYWLLYDVAFSYLI ERFDSPVQERQVAQANRQFDALSGENPGASDVEQVLALDLLSPFALWRLTEAERLAGR PVLPLLLGGALLLEDFPPMWDEALRAANTELPGALAPIIGAIKRHCREEFISFLYEDD FVDVDFRTSVLAAFEQVPDVEDIPAVARAYESYDDETSSK" gene complement(2792928..2793647) /locus_tag="CMS_2644" /old_locus_tag="CMS2644" /db_xref="GeneID:6158196" CDS complement(2792928..2793647) /locus_tag="CMS_2644" /old_locus_tag="CMS2644" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711289.1" /db_xref="GI:170782955" /db_xref="GeneID:6158196" /translation="MAVTSDEVFLGERAGSFVGNTRRALGGVRGLSLQASQKRDLVLN VAFTDDFVVVRLSGAHPRYMHYPALLAKGGLEEADRLAIQGNIMMAAYMALRSMGLGL QVYSALQAAIPIASSVYRADLIDVIMRDVIIARDLKSLLELAQRTILEPQSSIQVEAS LSLITHKGQIDDKVLELLADRFAAVAKLTGQAIIFYNAAQLMRSVNAAKARDLYMKAA DLDAVTASGHIGFATLAPLIM" gene complement(2793638..2794111) /locus_tag="CMS_2645" /old_locus_tag="CMS2645" /db_xref="GeneID:6158197" CDS complement(2793638..2794111) /locus_tag="CMS_2645" /old_locus_tag="CMS2645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711290.1" /db_xref="GI:170782956" /db_xref="GeneID:6158197" /translation="MPGRPQSHDNAEKSRRAFEERLPASWTFTAPTGDYGVDGDIEVF EAGFATGMHFLVQLKSVERLAGAPKKAIKNATRNYWAALDLPTLIVLWEAASGRIWWK WAHLVDDWGADPANKELTVIFEDEWSADTPNVVLDEVRAQRALKKVTRVSRSLWQ" gene complement(2794238..2795296) /locus_tag="CMS_2646" /old_locus_tag="CMS2646" /db_xref="GeneID:6158198" CDS complement(2794238..2795296) /locus_tag="CMS_2646" /old_locus_tag="CMS2646" /codon_start=1 /transl_table=11 /product="putative glycosyltransferase" /protein_id="YP_001711291.1" /db_xref="GI:170782957" /db_xref="GeneID:6158198" /translation="MQTPGDRAAHPDDARPSIRTAGTDQQHPEEILVLRAIKLGDILV AVPALRAIRRAHPDARIALATTGWLAPVVKLLGMVDEHLPQQGFDHPIAREPGTVDLA INLHGAGHESRALLHELRAHRTLGHAAPQLDRLPAADGPAWEDHVLERYRWARLVSWH GMPADPDDVGILVPAEPPVAEHAVVIHVGAAYGSRQWPVDRFAAVARALADEGRTVVF TGSDKERERALEVAALAGMPTETVLAGELALDAFAGIIAAADLVISADTGAAHLATAY GIPSVVIFGPASPEEWGPPASGPHIVLTDASQRLGDTFSSVPDPALLAITPAHVLEAA RSLDGHLVIRPLTDDPRD" misc_feature complement(2794322..2795032) /locus_tag="CMS_2646" /old_locus_tag="CMS2646" /inference="protein motif:HMMPfam:PF01075" /note="HMMPfam hit to PF01075, Glycosyl transferase,family 9, score 1.6e-08" gene complement(2795358..2796023) /locus_tag="CMS_2647" /old_locus_tag="CMS2647" /db_xref="GeneID:6158199" CDS complement(2795358..2796023) /locus_tag="CMS_2647" /old_locus_tag="CMS2647" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711292.1" /db_xref="GI:170782958" /db_xref="GeneID:6158199" /translation="MSAIQAMTPAAIHPSEGYDGFVGWVLGLIEVLGEVGVGLAVLIE TFVPPIPSEAILPVAGFLAYEGRMNAWGAWAAATIGALVGVLIWYAIGAALGRNRTRR LVGRIPLLDHADFDKAEAFFQRWGGTAVLLGRCVPLVRSFISIPAGIERMPVWRFSLY TVIGSGAWNAIWVGLGFAFGPAIRPVLEEWSGLISYAAIGIIALLVLWFVITRVIRRV RAA" misc_feature complement(order(2795391..2795459,2795487..2795555, 2795748..2795816,2795895..2795963)) /locus_tag="CMS_2647" /old_locus_tag="CMS2647" /note="4 probable transmembrane helices predicted for CMS2647 by TMHMM2.0 at aa 21-43, 70-92, 157-179 and 189-211" misc_feature complement(2795439..2795921) /locus_tag="CMS_2647" /old_locus_tag="CMS2647" /inference="protein motif:HMMPfam:PF00597" /note="HMMPfam hit to PF00597, DedA, score 5.4e-16" gene complement(2796387..2796662) /locus_tag="CMS_2648" /old_locus_tag="CMS2648" /db_xref="GeneID:6158200" CDS complement(2796387..2796662) /locus_tag="CMS_2648" /old_locus_tag="CMS2648" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711293.1" /db_xref="GI:170782959" /db_xref="GeneID:6158200" /translation="MGTSVCASAWHLRGDAADRVAERADADLSRALALLAEDGGADAG ARPPAPPSVRPARTSVAPVCVALSQPVKRARSSASRGSALAPGAPSA" gene complement(2796702..2797649) /locus_tag="CMS_2649" /old_locus_tag="CMS2649" /db_xref="GeneID:6158201" CDS complement(2796702..2797649) /locus_tag="CMS_2649" /old_locus_tag="CMS2649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711294.1" /db_xref="GI:170782960" /db_xref="GeneID:6158201" /translation="MIRSRCSRRTTGADQDPWQSEWTSRTPPSFIARLVHCPHAHEHA PTFQVRRIPLPHVGASMSARPLHPVHPLRPLRPLRPFGRTFLSTRRLLAFVAVGALAG LGLGLAAPSSDAFAADHGSSHARTRLERSLEDKTLVEDLKSGRVTQEDVLDAGEHGLT INGHHVDGWTKPSAAQQVAGQQMAAQLRADPAAAQSLRDEMGDLSDGDWPDSADAPAG SAPTGAAGITESKHWWNKVIKWFQGEHVYINGPWFKTIVAGGVAGGMIGLCLFFDFSK ITCSLVGAAVATVAEWIKNTTCARNGIWLYYPYWWKSHC" misc_feature complement(order(2796834..2796902,2797320..2797379)) /locus_tag="CMS_2649" /old_locus_tag="CMS2649" /note="2 probable transmembrane helices predicted for CMS2649 by TMHMM2.0 at aa 91-110 and 250-272" gene complement(2797646..2797882) /locus_tag="CMS_2650" /old_locus_tag="CMS2650" /db_xref="GeneID:6158202" CDS complement(2797646..2797882) /locus_tag="CMS_2650" /old_locus_tag="CMS2650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711295.1" /db_xref="GI:170782961" /db_xref="GeneID:6158202" /translation="MTRGKSREDGPRRERGFGAAIERFNERLRPYLGAPPLGPYTDDL VPEPQSRLCPMCGKPMPDHDIDRSGARTQVRCPV" gene 2797928..2798398 /locus_tag="CMS_2651" /old_locus_tag="CMS2651" /db_xref="GeneID:6158203" CDS 2797928..2798398 /locus_tag="CMS_2651" /old_locus_tag="CMS2651" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711296.1" /db_xref="GI:170782962" /db_xref="GeneID:6158203" /translation="MAHEGATRTDPLALESQLCFAAVLAARSVVALYRPILEPLGLTH PQYLVMLALWERDGRSISDLGGALALEPATVTPLLKRLQSAGLLERARSAEDERVVRV TLTDAGRALRQQAEQVPATVAERTGMTPTELGRIRDDLHAFLARIDAAPDPADA" misc_feature 2798051..2798356 /locus_tag="CMS_2651" /old_locus_tag="CMS2651" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.1e-20" gene complement(2798462..2799304) /gene="doc" /locus_tag="CMS_2652" /old_locus_tag="CMS2652" /db_xref="GeneID:6158204" CDS complement(2798462..2799304) /gene="doc" /locus_tag="CMS_2652" /old_locus_tag="CMS2652" /note="C-terminal extension relative to homologues" /codon_start=1 /transl_table=11 /product="putative death on curing protein" /protein_id="YP_001711297.1" /db_xref="GI:170782963" /db_xref="GeneID:6158204" /translation="MVVALSFEAVVEINLEFGGHGAGVRDANGVHAAVGRAFNGFGGV DPFPSVFDKAAALMHGLATTQYFHDGNKRTAFLSAVAFLELNGVVLGAVEPVEAEVFT LAVAAGVVETSRVAEWFRSVHERRQRGSAVDPRIEYLMLVGHVEERDGFLTDWYGVGI AGRLIDPRESKPPYQLPVFVCGKIHWREEDTGQGHVLALSVVPRDPGSMDPPRRNKSR HGLAPPVRGGHEHHPEDLMPSTFHFQVAPRIVVPGDLVVEVRLDSVLVGTLPFKVTLV TLSD" misc_feature complement(2798948..2799298) /gene="doc" /locus_tag="CMS_2652" /old_locus_tag="CMS2652" /inference="protein motif:HMMPfam:PF05012" /note="HMMPfam hit to PF05012, Death-on-curing protein,score 1.1e-11" gene 2799680..2800525 /locus_tag="CMS_2654" /old_locus_tag="CMS2654" /db_xref="GeneID:6158671" CDS 2799680..2800525 /locus_tag="CMS_2654" /old_locus_tag="CMS2654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711298.1" /db_xref="GI:170782964" /db_xref="GeneID:6158671" /translation="MTLSADGTLQDGRVLVGPVDAPELHVMTYNIRRLFRRYRPGSPD RWADREPLIAELLQREQPALLGTQEAMPTQGRALSHALGRHYRRIGHGRNADGHGEGC PTFYDTRRLELTTWRQVALSDTPAVAGSRTWGNMVPRIAVVADFTDRATGLPLRHVNT HFDHLSRRSREESARMILGIVAEVEAPTIVAGDTNAGINTEPHRLLIGSGALVDAWPA ARERLTPEWGTWSNYKAPKRTTRRIDWMLVTPDVEVERVGINTTRIDGRAPSDHEALQ AVVRC" misc_feature 2799749..2800516 /locus_tag="CMS_2654" /old_locus_tag="CMS2654" /inference="protein motif:HMMPfam:PF03372" /note="HMMPfam hit to PF03372,Endonuclease/exonuclease/phosphatase, score 3.3e-09" gene 2800519..2801196 /locus_tag="CMS_2655" /old_locus_tag="CMS2655" /db_xref="GeneID:6158205" CDS 2800519..2801196 /locus_tag="CMS_2655" /old_locus_tag="CMS2655" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711299.1" /db_xref="GI:170782965" /db_xref="GeneID:6158205" /translation="MLTDPSDPASLDDPHAPEDVAAFAGLAGLTFLQPPHGITAILAD AVRVIGLLTFLFSVFAWTGTTSAMFALALLGLVAPRSLGARPGLDLAIGVTTLVSAAS NRLDLYEMLPWWDIPAHLVTTAALAALVILLADRAGVVVDRRPLPLGILSLTVGLALS ALWELGEWAGRAWLDPAILTGYDDTIGDMAVGGLGALLIAPLMPMLLARSRWRQAPLA RSIDSTN" misc_feature order(2800576..2800644,2800663..2800731,2800849..2800917, 2800954..2801013,2801071..2801139) /locus_tag="CMS_2655" /old_locus_tag="CMS2655" /note="5 probable transmembrane helices predicted for CMS2655 by TMHMM2.0 at aa 20-42, 49-71, 111-133, 146-165 and 185-207" gene complement(2801157..2801771) /locus_tag="CMS_2656" /old_locus_tag="CMS2656" /db_xref="GeneID:6158206" CDS complement(2801157..2801771) /locus_tag="CMS_2656" /old_locus_tag="CMS2656" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711300.1" /db_xref="GI:170782966" /db_xref="GeneID:6158206" /translation="MGRRPSAVLRRRRPSKPERYVIALFCEGEATEPEYFKALAALPE IRSRAKLDMRISLTGAVPLTLVESAVAARARDEASEYWCVFDVEWPRQHPHLHEAFEL ARTRSIRLAVSNPCFEIWLILHMSEHGSHLDNDDARRRRRDLDGAGDKHVDAAAYLPL RAVAAGRARALELRHERESSLMPHNNPSTSVYQLVESIERASGA" misc_feature 2801172..2803179 /note="submitted with no further information" gene complement(2801771..2803054) /locus_tag="CMS_2657" /old_locus_tag="CMS2657" /db_xref="GeneID:6158207" CDS complement(2801771..2803054) /locus_tag="CMS_2657" /old_locus_tag="CMS2657" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711301.1" /db_xref="GI:170782967" /db_xref="GeneID:6158207" /translation="MLIRFAVENFRSINEPVELSMVALDANREGPRPSESLNASLLSV VGIFGPNASGKSNILAAIEWLRRAVTTSLRSWDEAIPVPNFAFGKDGSRPTKFWVEYL IEDIRFEYQLELDSTSVKYEGLFHYPAGRRRRLFERSDMELKLQDGLGELSGARKLLT ETALVLSIVRLFKEPLTRSFTRQVFNTSSKGLHSKTGMMREFGMGTFGSSAPLWFDMP EVTMSTDAEDDDQSAELPVNNKREQGLALLKMADLGIVDVIRREDESSIADQRNRKVT MLVHNADGGRYPLDMMAESAGTQTWFRLVGPLLQTLERGGVLVVDEIDASLHPKLSAE ILGIFSNPRTNPNNAQLIFTSHDASLLARLNRDEIWLTEKDDSGATSLTPLTDYNGDR VRKSQNLEKGYLEGRFGGVPDIDMVGVYRALGLIG" misc_feature complement(2802887..2802910) /locus_tag="CMS_2657" /old_locus_tag="CMS2657" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2803273..2804889 /locus_tag="CMS_2658" /old_locus_tag="CMS2658" /db_xref="GeneID:6158208" CDS 2803273..2804889 /locus_tag="CMS_2658" /old_locus_tag="CMS2658" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711302.1" /db_xref="GI:170782968" /db_xref="GeneID:6158208" /translation="MARGAVGYVSVMRSPGNDLEAVLFDRDGTLVVDVPYNGDPALVT LMPGAREAVDAVRAAGLRIGMVTNQSGIARGLITRQQADAVNARVQELLGAFDLVLLC PHGSEDGCECRKPRPGMVLEACRTWGVDPSRVAVVGDIAADMGAARAAGARGVLVPTP VTREEEVAEAELVAPTILDAVHLLIHDPAPRRVLVVRLDSVGDVLISGPAVRAVAADP RVEVHLLCGPRGASAGRLLPGVHAVHVWDAPWISSPAPAADAASVDALHAILAEVDAD EAVILTSFHQSPLPLALLLRLAGVERITGASVDYAGSLLDVRLKPGEDLDEDQPEPER ALAIAAAAGHALPDGDDGRLAVLPAELPSDVEALLPDGPFALVHPGAAVGARAYPADQ HRDAVALLAARGIPVVVTGGPDERDLTAHVAGSIALDLGGRTDLAGLGALMRRAAVLV SGNTGPAHLAAAVGLPVVSLFSPVVPPIRWAPYRVPVILLGDQDAACKLSRARDCPVP GHPCLAGVAPAEVADAVVRLMATSRAEVPA" misc_feature 2803327..2803752 /locus_tag="CMS_2658" /old_locus_tag="CMS2658" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 0.0029" misc_feature 2804059..2804805 /locus_tag="CMS_2658" /old_locus_tag="CMS2658" /inference="protein motif:HMMPfam:PF01075" /note="HMMPfam hit to PF01075, Glycosyl transferase,family 9, score 2.3e-07" gene 2804886..2805989 /locus_tag="CMS_2659" /old_locus_tag="CMS2659" /db_xref="GeneID:6158209" CDS 2804886..2805989 /locus_tag="CMS_2659" /old_locus_tag="CMS2659" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711303.1" /db_xref="GI:170782969" /db_xref="GeneID:6158209" /translation="MRILMWHVHGGWTDSFVLGSHEILFPTTPARDAWGLGRGGRAWP SSAREVDPSSLHDADVDLVLLQRMPEIAEAERLLGRRLGSDVPAVFLEHNTPRGAPTE TVHPLADRDDIPVIHVTRFNALMWDTGCAPTTVVEHGVPDPGALYTGEALSFGAVINE PVRRGRITGTDLLPAFAEVAPVEVFGMGTDLVPDAFPDLGERIVPRGDLPTSRMHPEL ARLRAYIHPHRWTSLGLSLLKAMHMGMPVLVLDATEASRAVPPDAGAISSDPADLVRA ARLLLADPDEAARRGRVAREAALARYSLGRFLHDMDAVLHDAVDAAGRRRAHRRAAGS TAPPEPPGTAPATALAPADPHPLPHPLDERTTR" gene 2805986..2807899 /locus_tag="CMS_2660" /old_locus_tag="CMS2660" /db_xref="GeneID:6158210" CDS 2805986..2807899 /locus_tag="CMS_2660" /old_locus_tag="CMS2660" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase/isomerase" /protein_id="YP_001711304.1" /db_xref="GI:170782970" /db_xref="GeneID:6158210" /translation="MRIAMISEHASPLATLGGVDAGGQNVHVAALSAALAEEGHTVTV YTRRDDEALPARVAFAPGVEVVHLDAGPARAVPKDELLPHMGELADGLLADWRTARPD VVHSHFWMSGVAALDAAARLASSPVGAAAAPPVLHTFHALGSVKRRHLGAEDTSPAAR AELEPGVGRRADAVIATCSDEAAELVRAGVDAARVTVIPCGVDIGHFTPRADEPDDAA DTADRLVPRKGVDLAIEALGILARRGRTDVELVIVGGSGDGASGSDDPEARRLMDAAR AAGVADRVRLHGRVSQADMPAVMRTADVVVCAPWYEPFGIVPLEAMASGVPVVASAVG GLTDSVVDGVTGILVPPRDPAAIAEALGELLADPARRRRLGRAGRDRMEHGYAWSTVA ARTAEAYLAAIQAAAPDDLPADPTVVDAHLDALGPVLDDLRRHAPRLTAWGREMADRL SHGARLIAAGNGGSAAEAQHLTSELVGRFDGDRRPFSAIALHSESSAVTAIGNDYGFD EVFARQVHAHARSGDIVVLLSTSGRSENLLRAAAAARAAGATTWAMTGPGPNPLVEAC DESLALDGPSANVQEAQLVAVHAICRAFESRLKANDRAAARASATTAVASASVPVTVS PASTTAAPAEVPA" misc_feature 2806589..2807128 /locus_tag="CMS_2660" /old_locus_tag="CMS2660" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 7.4e-48" misc_feature 2807324..2807755 /locus_tag="CMS_2660" /old_locus_tag="CMS2660" /inference="protein motif:HMMPfam:PF01380" /note="HMMPfam hit to PF01380, Sugar isomerase (SIS),score 8.3e-09" gene 2807896..2809278 /locus_tag="CMS_2661" /old_locus_tag="CMS2661" /db_xref="GeneID:6158211" CDS 2807896..2809278 /locus_tag="CMS_2661" /old_locus_tag="CMS2661" /codon_start=1 /transl_table=11 /product="putative bifunctional kinase/glycosyl transferase" /protein_id="YP_001711305.1" /db_xref="GI:170782971" /db_xref="GeneID:6158211" /translation="MRIVVVGDVLLDVDMTGAAHRLSPDAPVPVIEVEESLPRAGGAG LVATMLARDGHDVRLVTVLSDDHHSATLRACLDRIEVVAGPSGAPTPVKTRVRADGHA IARIDEGCAPPPTPAATDAMLDAIASADAIVVADYGRGVTRDPRLRAALDARAAEVPL VWDPHPAGEAPVPNTALATPNLAEARAFSGVAGRDVSAAADAARLLQAKWGVATVAVT MSERGALLVSAPASGAAGGSMPVVVPAPLVATGDPCGAGDRLAATALAGLAAGSPVED AVRDAVASAAEYVDAGGVATLVGPPAARPIGGHAASALQVVRATRAAGGTVVATGGCF DLVHAGHARTLAAARALGDCLVVLLNSDDSVRRLKGPERPIMTEEDRVDLLMSLGVVD AVVLFSEDTPEEALRSIKPDLWVKGGDYRAEDLPESAVIAEWGGQAVTVPYHPGRSTT KLAGALARVG" misc_feature 2807899..2808804 /locus_tag="CMS_2661" /old_locus_tag="CMS2661" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 6.4e-15" misc_feature 2808880..2809260 /locus_tag="CMS_2661" /old_locus_tag="CMS2661" /inference="protein motif:HMMPfam:PF01467" /note="HMMPfam hit to PF01467, Cytidylyltransferase, score 4.1e-17" gene 2809433..2810026 /locus_tag="CMS_2662" /old_locus_tag="CMS2662" /db_xref="GeneID:6158212" CDS 2809433..2810026 /locus_tag="CMS_2662" /old_locus_tag="CMS2662" /codon_start=1 /transl_table=11 /product="putative short chain oxidoreductase" /protein_id="YP_001711306.1" /db_xref="GI:170782972" /db_xref="GeneID:6158212" /translation="MLDLDTSSVTGMEAHRIDVSDTRATEALVTEIAQAHGGLDAVVT AAGIDHCGRLVDVAPTEWEKVIGVNLMGTVAVVRAALPFLTESHGRVVTVASSLAIKA VSDATAYCASKFGVLGFTRALAAETKGEVGVTTLIPSGMKTHFFDDRDPKYKPGSDAN LNDPAAVADSVMFILGQPRGCEIRELVITHELEDSWP" misc_feature 2809433..2810014 /locus_tag="CMS_2662" /old_locus_tag="CMS2662" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 3.8e-12" misc_feature 2809718..2809804 /locus_tag="CMS_2662" /old_locus_tag="CMS2662" /note="PS00061 Short-chain dehydrogenases/reductases family signature." misc_feature 2810080..2811961 /note="submitted with no further information" gene 2810242..2811723 /locus_tag="CMS_2663" /old_locus_tag="CMS2663" /db_xref="GeneID:6158213" CDS 2810242..2811723 /locus_tag="CMS_2663" /old_locus_tag="CMS2663" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711307.1" /db_xref="GI:170782973" /db_xref="GeneID:6158213" /translation="MFIKDNRRPDMPDGIRYGEFVDMISHMNQNSLLLELARRTSAEG ILDNYDPSKQGQNWVPPFAYADVARASISQGNREGFPAIGEIVDDYLHASIRIYVPNV EDLGEFGAHQNELRMMHIQGTDQQSPFSRAASAMALFTRTKIPPRAKLKVMKGDWFEE IMGVSLDELFYILMNLSLMFQIGKGVLTIKDLHRPIFAQAIETVSVEKFIHVLNIMSL DLESFRVMEAEEREGVEEGLQRLTHNPLGSSPFITGVTRGYVAPVWHWISSQVSTANL YYALISRAGSDFAGDLGQLFEAYVGEQLALLNVRLQEEVEYKDGKNRVKTTDWILELG GLTILIECKSTRPDKHVQRADEDMLAFVKDRVSKAVKQLNNTNAIFDTVIPADMSRAT MRVGIVLTMEPFYAVAETLAAIPDMAPDIPVAVINIRELEALVTLGSRRVEELISKSV EEAKQSGLMYFDLSEALAVTQHQDNPILAAAWDESILVKTLGG" gene complement(2811989..2812600) /locus_tag="CMS_2664" /old_locus_tag="CMS2664" /db_xref="GeneID:6158214" CDS complement(2811989..2812600) /locus_tag="CMS_2664" /old_locus_tag="CMS2664" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711308.1" /db_xref="GI:170782974" /db_xref="GeneID:6158214" /translation="MTTYPYESQWGDLACNAPLIERVESPADRFDWRTEGYPDESEYV FWSRHVCGLAGLRSVLRAWIPAAGALPMHELITRAVARGALTRDGSEVGGLYYRPFAE WVRDDFGIEAVVHPRIDVPELLAEVGEGRGVLASVSSEIRYPELPATRRGGHLVLVHA FDGDTATFHNPSGIEATAADARLGAEGFARFSAERGVALVRPR" gene 2812705..2813199 /locus_tag="CMS_2665" /old_locus_tag="CMS2665" /db_xref="GeneID:6158215" CDS 2812705..2813199 /locus_tag="CMS_2665" /old_locus_tag="CMS2665" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711309.1" /db_xref="GI:170782975" /db_xref="GeneID:6158215" /translation="MISTPRPGPRPTLSDEGPQRQLTDRATPELWGRLVARAFALPGV RESHSQVSPASSRGLFLEDRDEPIVPWTSLAPEGRLEPVHLHGVEDTSTHLCLPVARG AELTALGWATPHQYEDFGTEFLVYGPRDAAELDVVIGLIEESIAFARDPGDEQPAHLP APEG" gene 2813327..2814346 /locus_tag="CMS_2666" /old_locus_tag="CMS2666" /pseudo /db_xref="GeneID:6158216" misc_feature 2813372..2813440 /locus_tag="CMS_2666" /old_locus_tag="CMS2666" /note="1 probable transmembrane helix predicted for CMS2666 by TMHMM2.0 at aa 13-35" /pseudo repeat_region 2813473..2814352 gene 2814459..2815819 /locus_tag="CMS_2667" /old_locus_tag="CMS2667" /pseudo /db_xref="GeneID:6158217" repeat_region 2814950..2815825 gene 2815949..2817268 /locus_tag="CMS_2669" /old_locus_tag="CMS2669" /db_xref="GeneID:6158218" CDS 2815949..2817268 /locus_tag="CMS_2669" /old_locus_tag="CMS2669" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711310.1" /db_xref="GI:170782976" /db_xref="GeneID:6158218" /translation="MTRAHRRRETALALAAVLVGLVILPAPPGSGVEGGFAQLDRYAA LTPAQAQRMIHAHPALELQVMDASPDRVVSWWASKDRKHQRALIRSSPELVGNLDGVD YASRDAANRRQLRAELRTEREAVAAHPDDADARNRLTALTAIRAALHPEARAGGGADA QPERMLVSLTHRDPPLAAIAVGDLDTARQVTFTVPGMGTYTDDMQLWTETAQNVYDEQ AAVGAPAAHAVVAWIGYRTPPPGVDATLGDYAERGAPLLASEIQGLHAARHGGDLTSV DVIAHSYGSTMAADALAARDLGVDSFVMLGSAGVEDGIEDARQLHARHVYAGEAADDD EAVWGRLSRQDPRAPAFGATVISVDGDPARGLLPVTTHAPVLHSPWNDDPDSRAWTTI RDPAQRAAEFAAHEETYGYLDMGTESLLNAAIATTPHATQRLDPAAG" sig_peptide 2815949..2816041 /locus_tag="CMS_2669" /old_locus_tag="CMS2669" /note="Signal peptide predicted for CMS2669 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.517 between residues 31 and 32" misc_feature 2815982..2816035 /locus_tag="CMS_2669" /old_locus_tag="CMS2669" /note="1 probable transmembrane helix predicted for CMS2669 by TMHMM2.0 at aa 12-29" misc_feature 2816465..2816977 /locus_tag="CMS_2669" /old_locus_tag="CMS2669" /inference="protein motif:HMMPfam:PF06259" /note="HMMPfam hit to PF06259, Protein of unknown function DUF1023, score 9.8e-13" gene complement(2817309..2818445) /locus_tag="CMS_2670" /old_locus_tag="CMS2670" /db_xref="GeneID:6158219" CDS complement(2817309..2818445) /locus_tag="CMS_2670" /old_locus_tag="CMS2670" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711311.1" /db_xref="GI:170782977" /db_xref="GeneID:6158219" /translation="MPVVAPLHETFPDVRSIAVLRGGGLGDLIFALPAMAALRAAYPD ARITLLGTPLHRALLGGRPGGPDEIEVLPVAHGVRDVPGTDPDPAEVEAFAARMRERR FDLAVQVHGGGRNSNPFLLRLGARHTVGTATDDAERLERVIPYVYYQHEVLRGLEVAG LAGAPIADLEPVVQVTDAERAAAAEHVTGAPGGLVVIHPGATDPRRRWPVESFAEVAR RAAADDAQVVVVGDATDAADADRIVALGREGLSAEQAGRITSLADSLTLGELAGLFTH ADVVLGNDSGPRHLAQAVGARTVGVFWFGNVVNAAAFGRTRHRIHIGWTTRCPVCGVD VTQVGWTADRCAHDPSHVADVRVDDVHADVDQLRRASLGERVDA" misc_feature complement(2817393..2818175) /locus_tag="CMS_2670" /old_locus_tag="CMS2670" /inference="protein motif:HMMPfam:PF01075" /note="HMMPfam hit to PF01075, Glycosyl transferase,family 9, score 3.1e-12" gene complement(2818522..2819613) /locus_tag="CMS_2671" /old_locus_tag="CMS2671" /db_xref="GeneID:6158220" CDS complement(2818522..2819613) /locus_tag="CMS_2671" /old_locus_tag="CMS2671" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001711312.1" /db_xref="GI:170782978" /db_xref="GeneID:6158220" /translation="MFAQTSVMLATMTSPPSAVKSGGRRTLGGRTVSMADVAAHADVS AQTVSRVSNGAQNVEATTRQRVMDAMAELGYRPNSAARALKTGRFRSIGIIMFTLSTL GNMRTLDAIVTAASGAGYTITLMPVPHPTEGEVAGAFSRLQEEAVDGVVIIIEAHMLD RADVIIPVGLPVVIIDSDAGDPFVVVDTDQEQGTRLVTQHLLDLGHTAIVHVAGPSTS YSAARRAAEWRATMLDAGLEPEDPAQGDWTTASGYRIGRELGQRADITGIVAANDQMA LGIMHALHELGRDVPGDVSVVGFDDTEESSSFWPPLTTVHQDFTEIGRRSMQVLLEML DGREPSGDRMVPTRLVVRQSAAAPRGDAR" misc_feature complement(2818555..2819349) /locus_tag="CMS_2671" /old_locus_tag="CMS2671" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 1.1e-05" misc_feature complement(2819455..2819520) /locus_tag="CMS_2671" /old_locus_tag="CMS2671" /note="Predicted helix-turn-helix motif with score 1475.000, SD 4.21 at aa 32-53, sequence VSMADVAAHADVSAQTVSRVSN" gene 2819669..2820610 /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /db_xref="GeneID:6158221" CDS 2819669..2820610 /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711313.1" /db_xref="GI:170782979" /db_xref="GeneID:6158221" /translation="MTTMSTSATRPKVPDAARPSGPPMRRDKRRWTGLGFVAPFLVVF LVVLIAPVGYSIYLSLFQERMIGGNSFVGIANYTQALNDPNFWDALGRVALFLVVQVP IMLFIALFAALALDSACLHFTAFFRISIFLPYAVPAVVAALMWGFIYGNRFGLVGNVE QATGWDLPDLLSQSWILASIGNIVTWEFVGYNMLLFYAALRVISPDLYEAAELDGAGP FRIITGIKLPAIRGALVIGVIFSIIGSFQLFNEPNILQTLAPNAISSYFTPNMYAYNL SFAGQQFNYSAAIAIIMGVLTMVVAYVVQLVGTRKDS" sig_peptide 2819669..2819833 /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /note="Signal peptide predicted for CMS2672 by SignalP 2.0 HMM (Signal peptide probability 0.727) with cleavage site probability 0.423 between residues 55 and 56" misc_feature order(2819768..2819836,2819945..2820013,2820050..2820118, 2820191..2820259,2820347..2820415,2820521..2820589) /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /note="6 probable transmembrane helices predicted for CMS2672 by TMHMM2.0 at aa 34-56, 93-115, 128-150, 175-197,227-249 and 285-307" misc_feature 2819924..2820607 /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 6.4e-09" misc_feature 2820266..2820352 /locus_tag="CMS_2672" /old_locus_tag="CMS2672" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2820613..2821563 /locus_tag="CMS_2673" /old_locus_tag="CMS2673" /db_xref="GeneID:6158222" CDS 2820613..2821563 /locus_tag="CMS_2673" /old_locus_tag="CMS2673" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711314.1" /db_xref="GI:170782980" /db_xref="GeneID:6158222" /translation="MSTLTGTPLAAPDAGTPTRDAPAERTPKRRRSAGAPRERRSIVL TLVMALLLIYSVLPLFWLLVNSTKTQDALFSSFGLWFSGDFALWDNIQGVLTYGNGEF VRWLGNTRIYVVVGAGGATLLATLAGYGLAKFDFPGKKIVFAVVLGAVAIPGTALAVP TFLLFSQMGLTNTPWAIILPSLISPFGLYLIWTYAVDSVPEEILEAARIDGSSEIRTF FTISLRLLSPGLITVLLFSIVATWNNYFLPLIMLSDSRWYPLTVGLNQWNAQSTTVGG QPIYNLVITGSFLAIIPIVIAFLFLQRYWQSGLSAGGVKA" misc_feature order(2820736..2820804,2820943..2821002,2821036..2821104, 2821132..2821200,2821285..2821353,2821447..2821515) /locus_tag="CMS_2673" /old_locus_tag="CMS2673" /note="6 probable transmembrane helices predicted for CMS2673 by TMHMM2.0 at aa 42-64, 111-130, 142-164,174-196, 225-247 and 279-301" misc_feature 2820916..2821545 /locus_tag="CMS_2673" /old_locus_tag="CMS2673" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 7.8e-11" misc_feature 2821198..2821284 /locus_tag="CMS_2673" /old_locus_tag="CMS2673" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2821616..2822983 /locus_tag="CMS_2674" /old_locus_tag="CMS2674" /db_xref="GeneID:6158223" CDS 2821616..2822983 /locus_tag="CMS_2674" /old_locus_tag="CMS2674" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711315.1" /db_xref="GI:170782981" /db_xref="GeneID:6158223" /translation="MKGTTMSISFPRRAKRAIALGLGIVLAGSLAACSSGSGGASADS ASADDLAKALDTQSSITVWGWAPAIKPIAEAFEKEHPKITVDVQNVGTGADQYTKLQN AIKAGKGAPDVAQIEYFAIPQFALGKSLADLSGYGYTDLKDQFTASTWNAVTEGDALY ALPQDSGPMAMFYRQDIFDKYQIAVPTTWDEYVAAAEKMHAADPNQYITSDSGDAGFT TSMIWQAGGHPYKVDGDKVTIDMQDAGAKKYTAMWNKLVANGSLAQTPGWTDEWFRGL GDGSIATLITGAWMPGNLEAQATAGSGQWRVAPMPQYTAGDTATAESGGSSIAVMQQS ENKLVAAEFAKFTTANEEGRKISFDAGGFPSTTADLNSPEFLADAPEYFGGQKINEVL SDASKNVVTGWQYLPFQVYTNSIFSDSASAAYSNGTSLDPVLEAWGKAAAEYGQQQGF TVDVK" sig_peptide 2821616..2821741 /locus_tag="CMS_2674" /old_locus_tag="CMS2674" /note="Signal peptide predicted for CMS2674 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.613 between residues 42 and 43" misc_feature 2821664..2822677 /locus_tag="CMS_2674" /old_locus_tag="CMS2674" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 2.9e-27" misc_feature 2821682..2821714 /locus_tag="CMS_2674" /old_locus_tag="CMS2674" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2823016..2824863 /gene="bga" /locus_tag="CMS_2675" /old_locus_tag="CMS2675" /db_xref="GeneID:6158224" CDS 2823016..2824863 /gene="bga" /locus_tag="CMS_2675" /old_locus_tag="CMS2675" /EC_number="3.2.1.23" /codon_start=1 /transl_table=11 /product="beta-galactosidase" /protein_id="YP_001711316.1" /db_xref="GI:170782982" /db_xref="GeneID:6158224" /translation="MSRTSPLPCPALTQGHDMPGLPASSARFRIGADDFELDGRPHRV IAGALHYFRVHPDQWADRIRKARLMGLDTIETYVAWNAHSPERGTFDTSAGLDLGRFL DLVHAEGMHAIVRPGPYICAEWDGGGLPGWLFGDPAVGVRRSEPLYLAAVDEFLRRVY EIVAPRQIDMGGPVILVQIENEYGAYGDDAEYLRHLVDLTRESGIIVPLTTVDQPTDE MLSRGSLDELHRTGSFGSRAAERLETLRRHQRTGPLMCSEFWDGWFDHWGEHHHTTSA ADAAAELDALLAAGASVNIYMFHGGTNFGFTNGANHKGTYQSHVTSYDYDAPLDETGS PTEKYFAFRDVIARYRSVPDEVPTRRGDAPAFKVAFDAAVPLADLVADADAWRATDAV PSMDALGVFRGFALHRVELPASDRTRVLAFGEVRDRAVVSVDGVRVGVIQRDQHETAI AVPPGRILEVLVEDQGRVNYGVRIGEAKGLIGPATLDGRELTGWESLPLDLGAMAASV SSAASFAASSVAEPVRFLDGPVLAHATFDVDAPADLFLDTRSWGKGVAFVNGFALGRY WTRGPQHTLYVPGAQLRAGRNDLVVFETGAAADPVVAFLAQPELGHLES" misc_feature 2823115..2824062 /gene="bga" /locus_tag="CMS_2675" /old_locus_tag="CMS2675" /inference="protein motif:HMMPfam:PF01301" /note="HMMPfam hit to PF01301, Glycoside hydrolase, family 35, score 8.7e-171" misc_feature 2823526..2823564 /gene="bga" /locus_tag="CMS_2675" /old_locus_tag="CMS2675" /note="PS01182 Glycosyl hydrolases family 35 putative active site." gene complement(2824918..2825949) /locus_tag="CMS_2676" /old_locus_tag="CMS2676" /db_xref="GeneID:6158625" CDS complement(2824918..2825949) /locus_tag="CMS_2676" /old_locus_tag="CMS2676" /codon_start=1 /transl_table=11 /product="putative bacteriophage protein" /protein_id="YP_001711317.1" /db_xref="GI:170782983" /db_xref="GeneID:6158625" /translation="MLPLPTDYASVLAALKRQVRAAQLTAQRRVNTQLIELYWSIGNV ILERQAEEGWGSAVVARLAEDLRAEFPAMKGFSRSNLFYMRAFAEAWPDRAEVVQQAV GRLPWGHVTVLLGKLDDRGARDWYAARAAEHGWSRNVLANQIMNRTLERTEAPPTNFA GQLAPADSDLARELGKDPYVFDFLDLTDAVSERELEQALMDRIVDTLRELGAGFAFLG RQVHLDVDGDDFFVDLLFFHTEQLRYVVIELKTGSFEPAFAGQLGFYVAVIDDKMRRD FHRPTVGILICGSRNAHTVRHALGQTSAPMAVSTYTYESMPAAEQQALPAAERIIAAL DWAEGDGSA" misc_feature complement(2824969..2825919) /locus_tag="CMS_2676" /old_locus_tag="CMS2676" /inference="protein motif:HMMPfam:PF06250" /note="HMMPfam hit to PF06250, Protein of unknown function DUF1016, score 2.1e-93" gene 2826106..2827596 /locus_tag="CMS_2677" /old_locus_tag="CMS2677" /db_xref="GeneID:6158225" CDS 2826106..2827596 /locus_tag="CMS_2677" /old_locus_tag="CMS2677" /codon_start=1 /transl_table=11 /product="putative aldehyde dehydrogenase" /protein_id="YP_001711318.1" /db_xref="GI:170782984" /db_xref="GeneID:6158225" /translation="MTTDTALDIDLAVDPEEPEAGPGTLRITDPRDGSLVGAIDASSP EQVDAAVRRSVDAAAAWAATPPAQRGQAVRRAAHALAEHAEELAELNVRETGKPRGDA LGGVGAGVDTLLQYSELGPIHRGRSLLGTLPNVDFSVPRPRGVTVALTPWNDPVAVAA GIIGAALVMGNTVVHKPSERCPHTGELLGRILAEALPDGALVSVVGGGDVGDRLVAHE DTCVVAHVGSTAAGEAIARRAAGTPTHVIRENGGNDPLLVDAGIDPEWAAAQAALGSF ANAGQICTSVERIYVHRDIADRFTAALVAEAERWNSSGDLGPLVDERMRDAVHEQVAE ALTDGARALVGGHVPDGPGSRYPATVLVDCTADMTVMTAETFGPVAAVQVVADFDEAL ARASDDRYGLAASVLTGSMEHAQRAAAELPVGTIKVNGVFGGAPGGAAQPRGRSGSGF GYGPELLDEMSTTTVVHLGLPVLDAGATTAAEAASGSVSTDAGDAR" misc_feature 2826160..2827506 /locus_tag="CMS_2677" /old_locus_tag="CMS2677" /inference="protein motif:HMMPfam:PF00171" /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase,score 2.2e-87" gene 2827593..2829148 /locus_tag="CMS_2678" /old_locus_tag="CMS2678" /pseudo /db_xref="GeneID:6158226" misc_feature 2827644..2828558 /locus_tag="CMS_2678" /old_locus_tag="CMS2678" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 5.2e-21" /pseudo gene 2829200..2829442 /locus_tag="CMS_2680" /old_locus_tag="CMS2680" /db_xref="GeneID:6158227" CDS 2829200..2829442 /locus_tag="CMS_2680" /old_locus_tag="CMS2680" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711319.1" /db_xref="GI:170782985" /db_xref="GeneID:6158227" /translation="MAGTDASRPDPPTRGPTVAINPIELQKHLSGLDYPASKDAIVKK AEESGADSDTLDALQGIADKEYDAPTAINAAVSDAS" gene complement(2829567..2829812) /locus_tag="CMS_2681" /old_locus_tag="CMS2681" /db_xref="GeneID:6158228" CDS complement(2829567..2829812) /locus_tag="CMS_2681" /old_locus_tag="CMS2681" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711320.1" /db_xref="GI:170782986" /db_xref="GeneID:6158228" /translation="MRYIDRRLEVVALSSTEWRVCDARIPQSDASRLLAYVQQHEHRV ELMRMRPVPGFCDWFGSVDDALATIAAELPQDHALTA" gene complement(2829954..2830094) /locus_tag="CMS_2682" /old_locus_tag="CMS2682" /db_xref="GeneID:6158229" CDS complement(2829954..2830094) /locus_tag="CMS_2682" /old_locus_tag="CMS2682" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711321.1" /db_xref="GI:170782987" /db_xref="GeneID:6158229" /translation="MTALRLLGRVLMRILYVLGKVRLGGSGQNPSNGDPMGFDKPQQY RP" gene complement(2830237..2830410) /locus_tag="CMS_2683" /old_locus_tag="CMS2683" /db_xref="GeneID:6158230" CDS complement(2830237..2830410) /locus_tag="CMS_2683" /old_locus_tag="CMS2683" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711322.1" /db_xref="GI:170782988" /db_xref="GeneID:6158230" /translation="MADLTDKAEGLIDSDKGEQATDGAIDKGQDAASNATGGKSDGAA EKAGDVADQKLGQ" gene 2830501..2831067 /locus_tag="CMS_2684" /old_locus_tag="CMS2684" /db_xref="GeneID:6158231" CDS 2830501..2831067 /locus_tag="CMS_2684" /old_locus_tag="CMS2684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711323.1" /db_xref="GI:170782989" /db_xref="GeneID:6158231" /translation="MREAGSVDQIDPRRLAGVLADPELRAAYARVVLGSDLDDALAHL SPARRKKARASLVGSGLVAVDADGTASAPDSVFRAILAQQPATPPAQGVERFLRDGRI TQWPAGPADLDDLLRHVVAEALDPDEVLDEKTLTARLLRVTDDHALLRRHLVDAGLLL RTRSGSEYARAEAHADPRDGARATGEPT" gene complement(2831064..2831834) /locus_tag="CMS_2685" /old_locus_tag="CMS2685" /db_xref="GeneID:6158232" CDS complement(2831064..2831834) /locus_tag="CMS_2685" /old_locus_tag="CMS2685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711324.1" /db_xref="GI:170782990" /db_xref="GeneID:6158232" /translation="MRENALGGSGKGYLVIDADEFKSRLLREAVADGSYDSWIVPSAV REREAAGEKFHPMELSSLVHAESADLADELRVRAVAEGRNVVIDTVLSSDTKARQIMG ELERAGYDVQVVDVEVPREVSEERIQKRWREGNEAAQRDEGLGGRWVPSEFGAWVYGE PGGGSRPEANARMVAEESPAVSRYRVYRKTVEQEREDPRAPATLETDMSRATRGGPLV PTRSGQAEVPQARPLPGITRAGRTAPGRAGPARVDRGR" repeat_region complement(2831124..2832527) gene complement(2832090..2832548) /locus_tag="CMS_2686" /old_locus_tag="CMS2686" /db_xref="GeneID:6158233" CDS complement(2832090..2832548) /locus_tag="CMS_2686" /old_locus_tag="CMS2686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711325.1" /db_xref="GI:170782991" /db_xref="GeneID:6158233" /translation="MSARDVPEEVAPAALALLRLRLAELDYLREVRRLLDAGRAEEEL ARDLRVFRPEDLARLRAAREVSMPLEGFSGALPMEICERYAVGLIDRERLVDELARYP YVPRALPDGYDDLVVNPPGTWAEVSRAAAAGLIDDEAYGDAFERHDGSSR" gene complement(2832568..2833440) /locus_tag="CMS_2687" /old_locus_tag="CMS2687" /db_xref="GeneID:6158234" CDS complement(2832568..2833440) /locus_tag="CMS_2687" /old_locus_tag="CMS2687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711326.1" /db_xref="GI:170782992" /db_xref="GeneID:6158234" /translation="MHERLLRASVEEVPELRSERRAIVQAGPPGAGKTSIREHLLGDA SKSFLVVDADEFKTRLLREAVADGSYESWIRPAAVRESEAAGERFHPMELSSLVHAES ADLADRQRTEAIRSGKNVVIDTVLSADTKARQIMGELERAGYDVQVIDVEVPREVSEE RIRKRWREGNEKAERGEGLGGRWVPSEFGAWVYGQQDGGSRPEVNARMVAEESPAVSR YRVYRKTAEQEREDPLAPATLETDMSRASRGGPLVPTRSGPAAVPQARSLPAVSRARG AARATGVGRSGRGR" repeat_region complement(2832620..2834023) misc_feature complement(2832721..2833440) /locus_tag="CMS_2687" /old_locus_tag="CMS2687" /inference="protein motif:HMMPfam:PF06414" /note="HMMPfam hit to PF06414, Zeta toxin, score 1.7e-06" misc_feature complement(2833339..2833362) /locus_tag="CMS_2687" /old_locus_tag="CMS2687" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2833580..2834107) /locus_tag="CMS_2688" /old_locus_tag="CMS2688" /db_xref="GeneID:6158235" CDS complement(2833580..2834107) /locus_tag="CMS_2688" /old_locus_tag="CMS2688" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711327.1" /db_xref="GI:170782993" /db_xref="GeneID:6158235" /translation="MREAEHAGCPSFHDVAEEVVMGLFDAPVEVRPAERALRMLRLVE LDYLREVRRLLESGYDEKKLIEDLAVFQPADLERIAAACEVPTAVDGFSGVTPYEICE RYSVGMLDRERLVDELVRFPYVPRDQVDGYDDLVVNPPGTWADVERASGNDLIDIDIY SEVFDRRHGQDEVGV" gene complement(2834205..2834708) /locus_tag="CMS_2689" /old_locus_tag="CMS2689" /db_xref="GeneID:6158236" CDS complement(2834205..2834708) /locus_tag="CMS_2689" /old_locus_tag="CMS2689" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001711328.1" /db_xref="GI:170782994" /db_xref="GeneID:6158236" /translation="MLRRVNPSIPRPTRPEQVPRMADDDTWDALPATLRSADLQRILQ IGQTTVSLWFAKGTIPGYRISHSWIAFRSEVREWLESTSTVPVPPHEPYPHPLDAYPD HLTYRDLMELFQKSRPAILGWLRDGVIPAMRPGGRWLIEKSAIRRLLDETSNQRAGFV PKGRRAS" misc_feature complement(2834334..2834399) /locus_tag="CMS_2689" /old_locus_tag="CMS2689" /note="Predicted helix-turn-helix motif with score 1175.000, SD 3.19 at aa 104-125, sequence LTYRDLMELFQKSRPAILGWLR" misc_feature complement(2834399..2834544) /locus_tag="CMS_2689" /old_locus_tag="CMS2689" /note="Predicted helix-turn-helix motif with score 1288.000, SD 3.57 at aa 104-55, sequence AKGTIPGYRISHSWIAFRSEVREWLESTSTVPVPPHEPYPHPLDAYPDHL" misc_feature complement(2834544..2834609) /locus_tag="CMS_2689" /old_locus_tag="CMS2689" /note="Predicted helix-turn-helix motif with score 1288.000, SD 3.57 at aa 34-55, sequence LRSADLQRILQIGQTTVSLWFA" gene complement(2834750..2835931) /locus_tag="CMS_2690" /old_locus_tag="CMS2690" /db_xref="GeneID:6158237" CDS complement(2834750..2835931) /locus_tag="CMS_2690" /old_locus_tag="CMS2690" /codon_start=1 /transl_table=11 /product="putative exported peptidase" /protein_id="YP_001711329.1" /db_xref="GI:170782995" /db_xref="GeneID:6158237" /translation="MNGAGKGILILIGAPAALMGMIVFLVLFGFGGDDASACTTQGAA SSSTGPRTPVDGYSGDQLDNAAAIMDVAAGLGLSRQAQVLGVMAAMGESSLRAIDYGD NAVNPDGSIADSIGLFQQQSSWGSVQERMDPTSSAKLFLARLQKVEGWETLEPTLAIH EVQINKDPYHYRQYQQPAEDVVAQLSGAAAAAPAATPVASGTPDPAAAPAPAAAGGCS AGGTVLPLKAPFDQTSGYGPRESPTAGASSWHPANDYQTRETGTSSGRTGYSCGSPVL AAQAGSVTTAGRYTVSIRSAAGYTNSYLHMYEPDMEVHVGDTVTPGQEIGKVGSNGPS TGCHLDIRIDVAGSTDPRVSGLPQSQTQGAPVSGYVDPKAFFAAFGVTLCGGECKHAS E" misc_feature complement(2834879..2835190) /locus_tag="CMS_2690" /old_locus_tag="CMS2690" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 8.6e-13" misc_feature complement(2835842..2835910) /locus_tag="CMS_2690" /old_locus_tag="CMS2690" /note="1 probable transmembrane helix predicted for CMS2690 by TMHMM2.0 at aa 20-42" gene complement(2835928..2836518) /locus_tag="CMS_2691" /old_locus_tag="CMS2691" /db_xref="GeneID:6158238" CDS complement(2835928..2836518) /locus_tag="CMS_2691" /old_locus_tag="CMS2691" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711330.1" /db_xref="GI:170782996" /db_xref="GeneID:6158238" /translation="MRAAATAGMRVAVGMRVARIAGAVALAAALALTAAGCASVTVHG DAPGDPVTTPAASPADSMPGADDDAPADPGQTEDDAGAQPEPVADAASQTAALAAADR VMRTYAQPGISEAEWERQMTPLLSQQGAVAFVPTIPSRLTAHAVTGTGTVIPAPTAYA LIVRVPTDDGDYDVALIRSSTTAPWLADEIQAVRFK" sig_peptide complement(2835928..2836059) /locus_tag="CMS_2691" /old_locus_tag="CMS2691" /note="Signal peptide predicted for CMS2691 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.911 between residues 44 and 45" misc_feature complement(2836393..2836461) /locus_tag="CMS_2691" /old_locus_tag="CMS2691" /note="1 probable transmembrane helix predicted for CMS2691 by TMHMM2.0 at aa 20-42" misc_feature complement(2836408..2836440) /locus_tag="CMS_2691" /old_locus_tag="CMS2691" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2836518..2837933) /locus_tag="CMS_2692" /old_locus_tag="CMS2692" /db_xref="GeneID:6158239" CDS complement(2836518..2837933) /locus_tag="CMS_2692" /old_locus_tag="CMS2692" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711331.1" /db_xref="GI:170782997" /db_xref="GeneID:6158239" /translation="MTDAPTVPAFPRIDATITPTADGWATGVLIVNGVATPFAEAAED EIRREILRSVRGTALQMQRAVRLTTRDRFGSQALAVAPDGLIEALSELDRADAIAAPV PASVPAPVPAAAAPAPVPAAAAAGSAPPAGIPAQAPAATATAAPAAITPPAAPAAPTD PPLTRRAARQSFLTREEVEEPATQGMRGTLTRLGIRMSPSEDERREREWTRLVSQHWP GPRTVAVVNGKGGVGKTMTTICLSSVFARHGGAGVLAWDNNQTRGTLGWSTEQGPHDA SILDLLPQVDRLLGTGAQSADLAHFVHHQTRDRYDVLRSKPEVLATQQRFDDTTVDLI HAVAAKFYRLVLIDSGNDETDPMWLRAIERADQIVVPTIGEAKAAESAALLIEGLAER GGHFADLAERAVVVVSAHKHDLREAEVDKIARGFGSLARDVVTIPYDPALGADVLNYG ALRAQTQRAWLSAGAAVARGL" misc_feature complement(2837229..2837252) /locus_tag="CMS_2692" /old_locus_tag="CMS2692" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2838189..2838800 /locus_tag="CMS_2693" /old_locus_tag="CMS2693" /db_xref="GeneID:6158240" CDS 2838189..2838800 /locus_tag="CMS_2693" /old_locus_tag="CMS2693" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711332.1" /db_xref="GI:170782998" /db_xref="GeneID:6158240" /translation="MSDNGNPWVVDAPAVVDTPASDAPPLTRRERLRGPRAPQPATVA APAAADRLPVRRADGTAELWWVGAHGGAGETTLARLAPGSRAAGHAWPAPVAGSPASR VVVVARTDHSGLLAAQRVAREWASGQVAGLVDLVGLVLVADAPGRRPKELRQLEQLVA GGYPRAWTLPWIDAWRLGPADPADMGREHQRLLADLQLTASPR" gene 2838827..2839150 /locus_tag="CMS_2694" /old_locus_tag="CMS2694" /db_xref="GeneID:6158241" CDS 2838827..2839150 /locus_tag="CMS_2694" /old_locus_tag="CMS2694" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711333.1" /db_xref="GI:170782999" /db_xref="GeneID:6158241" /translation="MSPTLLALDVVHQASAHIHHAMDAVAIDVPNGDAQAPADWTEKF GRIIGIAKWVLLPLAVLSLIATGAMLFRNNRHEGGEIQERLIKIGFGLFLGLGAASLV SFVIA" misc_feature order(2838971..2839039,2839076..2839144) /locus_tag="CMS_2694" /old_locus_tag="CMS2694" /note="2 probable transmembrane helices predicted for CMS2694 by TMHMM2.0 at aa 49-71 and 84-106" gene 2839202..2839954 /locus_tag="CMS_2695" /old_locus_tag="CMS2695" /db_xref="GeneID:6158242" CDS 2839202..2839954 /locus_tag="CMS_2695" /old_locus_tag="CMS2695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711334.1" /db_xref="GI:170783000" /db_xref="GeneID:6158242" /translation="MSTPATPFHKRPLWIAVAALLAVILVVGGIAAGTGAFSGGGTPA AAPPGDATVAPDAAPAPGASALPDGAASVCGLQGYEETSSLTSAPEAKWEIIGTMAAP QAPKTAGPGVQEDDAQFRTCFAHTTEGALFATINFFATSTNPANQPRMYELLADGAAR DTVRSAGGGTQQGSSTRLQVAGFKVTQYNADTATIDLAMSVSSKDGALVSQPMVVKWE HGDWKIVLTEAGPQYKPAPLTSLGGYIPFSGV" sig_peptide 2839202..2839360 /locus_tag="CMS_2695" /old_locus_tag="CMS2695" /note="Signal peptide predicted for CMS2695 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.280 between residues 53 and 54" misc_feature 2839238..2839306 /locus_tag="CMS_2695" /old_locus_tag="CMS2695" /note="1 probable transmembrane helix predicted for CMS2695 by TMHMM2.0 at aa 13-35" gene 2840027..2841523 /locus_tag="CMS_2696" /old_locus_tag="CMS2696" /db_xref="GeneID:6158243" CDS 2840027..2841523 /locus_tag="CMS_2696" /old_locus_tag="CMS2696" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711335.1" /db_xref="GI:170783001" /db_xref="GeneID:6158243" /translation="MLSDAASNTLKQLVHDAVQTYGQVVASLGTMWVHVPSPQFTKGD SSTVGYTPNSTVTTDFDTLLGYIAWIGLVVAVLSIIGFAILYMRARSEDTGMDSLGRL GVVLAGVFLITSASSLVAWVIPHSAPDGSTSTVGFLQNSTWYIVLVMAVGSVVLAGIR LAWTQRTQPVGELVRSLVTLVMVSTIGLTVIQLAVQIGDVFAVGVLNAATSCDVSVVE GNCFGRNIGALIFLTDQSPIGAIGILILALIAVLITYVQIAMMVVRSAMLVLLAGILP LTASFTNTATGNQWFRKSLGWLTAFILYKPAAALVYAAAFRLIGTDLFAKDDQGIWSI LTGMALMLIALVALPALMRFIAPMVAPAGGVSGAAVAGAVMGGAGEAASGAIKQAGSM ASRSSGGGGGGGSASGPSGAANASAGARGGTAAKGAAAGAKAGAGASGAAAGGAAGGA AAAGAAVAGPVGLAALGVAKLAEGAKKAAHATKGAIEDAAGEGPSGAR" misc_feature order(2840216..2840284,2840321..2840389,2840447..2840515, 2840552..2840620,2840735..2840803,2840822..2840881, 2840909..2840977,2841014..2841082) /locus_tag="CMS_2696" /old_locus_tag="CMS2696" /note="8 probable transmembrane helices predicted for CMS2696 by TMHMM2.0 at aa 64-86, 99-121, 141-163, 176-198,237-259, 266-285, 295-317 and 330-352" gene 2841620..2843044 /locus_tag="CMS_2697" /old_locus_tag="CMS2697" /db_xref="GeneID:6158244" CDS 2841620..2843044 /locus_tag="CMS_2697" /old_locus_tag="CMS2697" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711336.1" /db_xref="GI:170783002" /db_xref="GeneID:6158244" /translation="MFPTMFGFAGAVMVIIVATNKGLVAGVITAAVFAGVLAAVAVKD KHGESGMIRIMNRAGWLFTRNRGAHLYRSGPLGFAEWGTAQLPGLAAGSRLTEWKDSY GRPFALIEVPSTNDFTVVLGAEPDGSALVDQEQVDIWVAEWGSWLEALADEPGLVAAS VTLETAPDTGTRLASEVLGRIDDRGSDFSKSVLRKIVATYPAGAATIKAYVAITFAGA TRTGAARRSPEEVGRELAYRLPGLTSGLSSTGAGAARPLTAQDLCEVVRIAYDPAAAI LIDQANSAGQATELYWPEVGPTAHQAAWDSYRHDSALSVSWMMSQAPRGNVGESILSR LLAPHRHIARKRVTMLYRPIDPARAAAIVEADKRDAEFLVGSTKNPTGRSRKDVIAAF ANESEESGGAGLVNFGMVVTATVQDPATIEDARAAVDSLSAQARIRLRVVHGSQDSAF AAGLPLGLVLPRHLAIPHDIRDQL" sig_peptide 2841620..2841721 /locus_tag="CMS_2697" /old_locus_tag="CMS2697" /note="Signal peptide predicted for CMS2697 by SignalP 2.0 HMM (Signal peptide probability 0.970) with cleavage site probability 0.205 between residues 34 and 35" misc_feature 2841677..2841745 /locus_tag="CMS_2697" /old_locus_tag="CMS2697" /note="1 probable transmembrane helix predicted for CMS2697 by TMHMM2.0 at aa 20-42" gene 2843197..2844675 /locus_tag="CMS_2698" /old_locus_tag="CMS2698" /db_xref="GeneID:6158245" CDS 2843197..2844675 /locus_tag="CMS_2698" /old_locus_tag="CMS2698" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711337.1" /db_xref="GI:170783003" /db_xref="GeneID:6158245" /translation="MLVQPSPEWRGTTVQVCGLWPYAVGSSSPISGVPLGLHLDTGAT VCADPISWFQSGIISNPSIFALGLPGLGKSTLIRRMCVGGDGMGYLPLVLGDLKPDYV DMVHALDGQVITLGRGRGHLNVLDPGGAIEAAEQLRAAGFEQERQRLIADAHGRRNTM VSSLLTILRKQAPDDVEESIIDAALRVLDDEFPGVPVLADLLRVIQDAHPAVRDVAVD RGDLGRYQEITRGLEASLISLTRGGRLGEIFAQQTDVAMRHDRPVVYDVSSIDESDTD LQAAVLLACWSQGFGTVNVATALADAGLQPRRHYLIVMDELWRALRVGKGIVDRIDSL TRLNRQRGVGLAMITHTMSDLLALADEQDRMKARGFVERAGMVVAGGLPRAEMSMLTQ AVALSRSEQDLVMSWQNPPGWSPDQEPPGRGRFLIKVGGHPGIPVHVELTEEERHIND TNKAWHATESFPEPDEASTRPSEPPLSAVDAAEPAAVEAGAA" misc_feature 2843395..2843418 /locus_tag="CMS_2698" /old_locus_tag="CMS2698" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2844672..2846468 /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /db_xref="GeneID:6158246" CDS 2844672..2846468 /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /codon_start=1 /transl_table=11 /product="conjugal transfer protein" /protein_id="YP_001711338.1" /db_xref="GI:170783004" /db_xref="GeneID:6158246" /translation="MSSERTNRRAEPGRANPGTIIATWAIGIAAGLLASAWAGLAAAH ALTGEGAALPADPLAVAIALKKGEVVWTPLAVVIAVAVAALLTALTVAVARAVRRLGR GRTRVDRSARYLASASDLDELRERASLAKAARLGVPGRPGVPLGRDLRSGGMLYASWE DVVVGIAGPRVGKTTSLVVPAILAAPGALITTSNKPDVVRATRDLRQGVGTTWVFDPQ QVVDEEPTWWWDPLSSVTDDTTAAKLAGHFAAGSREPDDRGDAFFDAAGKDLLTGLLL AAALDHRPITDVLRWLTNPDEREMVAVLRHGGYPLIADDVESASRTSPRQRDGVYATA RKMAACVRSSRINRWITPAGGDAAVDPRPRLDPDAFVRSTDTLYSLSVEGEGTAAPLV TALTVAIVEAAERLARTQPGGRLTTPLLCVLDEAANVCRWKELPDLYSHRGSRGIPVM SIFQSYAQGVDVFGREGMRKLFSAANEVVYLGGVKEAEWLRELSELIGDYDHETVSSS TTRGVRSTSVQNDRRRILDTSELAELPRGRGVLLASGVRASMIATVPWMDGPEAAVIR ASLAAADARAVSGAGSEAGSGAATRRAQGAAW" sig_peptide 2844672..2844806 /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /note="Signal peptide predicted for CMS2699 by SignalP 2.0 HMM (Signal peptide probability 0.985) with cleavage site probability 0.389 between residues 45 and 46" misc_feature order(2844729..2844797,2844894..2844962) /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /note="2 probable transmembrane helices predicted for CMS2699 by TMHMM2.0 at aa 20-42 and 75-97" misc_feature 2845044..2846447 /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /inference="protein motif:HMMPfam:PF02534" /note="HMMPfam hit to PF02534, TRAG protein, score 1.3e-06" misc_feature 2845170..2845193 /locus_tag="CMS_2699" /old_locus_tag="CMS2699" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2846462..2846932 /locus_tag="CMS_2700" /old_locus_tag="CMS2700" /db_xref="GeneID:6158247" CDS 2846462..2846932 /locus_tag="CMS_2700" /old_locus_tag="CMS2700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711339.1" /db_xref="GI:170783005" /db_xref="GeneID:6158247" /translation="MVTDAFGWGDAPAASASASASAEQVFADVEAFVRDLLAPTYRRE VSPRGESRWDPAWWRHPEAVARLEALWLAWEALRLEGATGMSVWWRDHADYHLTVLMG PTGPFARTSATTEAGEPLPCAPLPCAPLPCAPRPDAPRPDATGSPEPEPTGAAS" gene 2846929..2847774 /locus_tag="CMS_2701" /old_locus_tag="CMS2701" /db_xref="GeneID:6158248" CDS 2846929..2847774 /locus_tag="CMS_2701" /old_locus_tag="CMS2701" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711340.1" /db_xref="GI:170783006" /db_xref="GeneID:6158248" /translation="MKREVPGWFRLLLCWPALLVLGMGLLAVLTAAADPSVLTRPETL IPGLVLLLLCVAAVRTLVRGARVIQGMVRGAQHELARPAREAAAAQDLAVRSAAGWAE ACRLRASLLRGERPPGFPVWDVVAEPGEVFLYDVRADYERYYGQDVTYTRSSGFLVGS PAFVLGGMAAAAIGNATRRSAAEARAAEQWRELQQVRLVISDRRLLCQVGGRWLAFWY AGMTAVYPEVREWALVCQFPDVEPLRLRGVDAPIAAVLTVLGTQGLDAVRDHPSLQPL GAIGS" sig_peptide 2846929..2847027 /locus_tag="CMS_2701" /old_locus_tag="CMS2701" /note="Signal peptide predicted for CMS2701 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 between residues 33 and 34" misc_feature order(2846959..2847027,2847055..2847114,2847388..2847456) /locus_tag="CMS_2701" /old_locus_tag="CMS2701" /note="3 probable transmembrane helices predicted for CMS2701 by TMHMM2.0 at aa 11-33, 43-62 and 154-176" gene complement(2847791..2849002) /locus_tag="CMS_2702" /old_locus_tag="CMS2702" /db_xref="GeneID:6158249" CDS complement(2847791..2849002) /locus_tag="CMS_2702" /old_locus_tag="CMS2702" /note="C-terminal domain similar to upstream CDS" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711341.1" /db_xref="GI:170783007" /db_xref="GeneID:6158249" /translation="MPDTVARSGGSDPAGRASRDASSLQGPAEEARLRAVHDLRLVGS AAEERFDRITRIARELFDMPVAEINLVGDVEQFTKSPQPAGVSLLSDRTQSFCDIAIR SPEILVVPDATADARFAERTTVTGPRHIRFYAGRPLLSGGQTVGTLCLVDTEPRELAP DQERLLDVMGAWVERELRDSREEELAGEIQRRLLPVDRPLWPDFDLAGISRPARGVGG DFYAWGEDADGLHVTIADVMGKGAGAAILASAVRSGFQAHRGPDAARTVAAVQAQLQA DLDATETFATFLHCRVDGSTGRFAYTDGGHGLTVLIRADGTHEILPALGLPLGVVPGA DWAAASGELRPGDRILAFTDGALDLFDGSLDSVAPLIDLVRTAADAAARGTLGDDVSA VCVRYAGSATA" misc_feature complement(2847809..2848327) /locus_tag="CMS_2702" /old_locus_tag="CMS2702" /inference="protein motif:HMMPfam:PF07228" /note="HMMPfam hit to PF07228, Stage II sporulation E,score 1.2e-29" misc_feature complement(2848472..2848870) /locus_tag="CMS_2702" /old_locus_tag="CMS2702" /inference="protein motif:HMMPfam:PF01590" /note="HMMPfam hit to PF01590, GAF, score 2.5e-18" gene complement(2849158..2850486) /locus_tag="CMS_2703" /old_locus_tag="CMS2703" /db_xref="GeneID:6158250" CDS complement(2849158..2850486) /locus_tag="CMS_2703" /old_locus_tag="CMS2703" /note="C-terminal domain similar to downstream CDS" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711342.1" /db_xref="GI:170783008" /db_xref="GeneID:6158250" /translation="MSSPARASRLAALSMPAWVRRTAWIPESAARSGSAGTSGPTPVL KQLPMLVLFALAVLASFAVPTLGVTAPRALLVSCGILVVATLLAVVVTLRRDLARFAV VVPALDFLAVGLLRIGTGENLSVFGSLVILPVVWFSLNPSRWNVLVAFVGVYVSLGLP LLLRLGGQNANELWRGFFSALAFAVAALVVNELSRRTRFSLEASHDRERVSEEELTRA SIVQQALLPKTTVPLAGYQVAGACLPSKAVGGDFFDWYPVREGLAFTLGDVMGKGVGA GIIAATARAVVRSAKNVPDPVAAIERTADCFTAEMSAAASFATVFHARVRAEDHTVLY ADAGHGLTALVRADGTHERLESTDLPVGVPGAAGWSSHEVELGPGDLIVTFSDGVLDL YDGTLRAVDRVAELARESASADELVRRITALAAGQANPDDVTVVVLRREA" misc_feature complement(2849164..2849715) /locus_tag="CMS_2703" /old_locus_tag="CMS2703" /inference="protein motif:HMMPfam:PF07228" /note="HMMPfam hit to PF07228, Stage II sporulation E,score 2.1e-32" misc_feature complement(order(2849917..2849970,2849989..2850057, 2850130..2850189,2850208..2850270,2850280..2850348)) /locus_tag="CMS_2703" /old_locus_tag="CMS2703" /note="5 probable transmembrane helices predicted for CMS2703 by TMHMM2.0 at aa 47-69, 73-93, 100-119, 144-166 and 173-190" gene complement(2850486..2850908) /locus_tag="CMS_2704" /old_locus_tag="CMS2704" /db_xref="GeneID:6158251" CDS complement(2850486..2850908) /locus_tag="CMS_2704" /old_locus_tag="CMS2704" /codon_start=1 /transl_table=11 /product="putative regulator" /protein_id="YP_001711343.1" /db_xref="GI:170783009" /db_xref="GeneID:6158251" /translation="MTETTRSLTLQSPPDDVDAVHELVARLWDDRPDVGALDRMAFET ALVELASNVIEHADTGEGVSCVVRVTVDDGVMSARLSDGSEPGDFRLAPREMPGVDAE SGRGLAMVQMLCDELTYERVGGENVWSVRRTRIEPEAS" gene complement(2850901..2851269) /locus_tag="CMS_2705" /old_locus_tag="CMS2705" /db_xref="GeneID:6158252" CDS complement(2850901..2851269) /locus_tag="CMS_2705" /old_locus_tag="CMS2705" /codon_start=1 /transl_table=11 /product="putative anti-sigma factor antagonist" /protein_id="YP_001711344.1" /db_xref="GI:170783010" /db_xref="GeneID:6158252" /translation="MALTTATARREDDVTVVTAAGMLNMAAAPELRQAIHDALDPAPA RIVVDLAGVDFIDSSGLGALIAGLRAARDAGGDLRAARDAGGDLRIAAPGPQVAMVLQ LSNLDRVLISTPTAEAAYRD" misc_feature complement(2850916..2851257) /locus_tag="CMS_2705" /old_locus_tag="CMS2705" /inference="protein motif:HMMPfam:PF01740" /note="HMMPfam hit to PF01740, Sulfate transporter/antisigma-factor antagonist STAS, score 4.8e-12" gene 2851535..2851903 /locus_tag="CMS_2706" /old_locus_tag="CMS2706" /db_xref="GeneID:6158253" CDS 2851535..2851903 /locus_tag="CMS_2706" /old_locus_tag="CMS2706" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711345.1" /db_xref="GI:170783011" /db_xref="GeneID:6158253" /translation="MSTAPEHVPTERRITRLAIETSIGLAWNAEGAIRGLPPLAWQLG GPWEGVHFSGDADAYAPEVRRDVIESWIAGLGLADAIDLTDGPLTRRGDDMVWTGVID EVVFELRYPAECADPAGPHD" gene complement(2851900..2852538) /locus_tag="CMS_2707" /old_locus_tag="CMS2707" /db_xref="GeneID:6158254" CDS complement(2851900..2852538) /locus_tag="CMS_2707" /old_locus_tag="CMS2707" /codon_start=1 /transl_table=11 /product="putative mutase" /protein_id="YP_001711346.1" /db_xref="GI:170783012" /db_xref="GeneID:6158254" /translation="MDGPMQIPPAAPARLLLTRHAQTPWNREYRYNSRTDVDVGDDAA EQLAPLADRLRGEGVERILVSTLLRARSTARILQEQGVAPGVVPEPRSELVELDFGGF EGITRDELRGPVHGPAFAAWLTGDDGEPAAPGGGETWAAAAVRARAVLHDVAADPRTT LVVAHGYLLRVLYLTALGRSPALTRSLVWANGQLIELERDGSGWRERGATAG" misc_feature complement(2851915..2852502) /locus_tag="CMS_2707" /old_locus_tag="CMS2707" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 2.3e-12" gene 2852615..2853013 /gene="B1047H05.25" /locus_tag="CMS_2708" /old_locus_tag="CMS2708" /db_xref="GeneID:6158255" CDS 2852615..2853013 /gene="B1047H05.25" /locus_tag="CMS_2708" /old_locus_tag="CMS2708" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711347.1" /db_xref="GI:170783013" /db_xref="GeneID:6158255" /translation="MTTSRTRDATPAVRAAFAAASAAYLVNCAIGIAAATRILPPRPE LRLHHRAYLLTGALTAVALASPLWAGSTARPAARRAARALAPALIPLAALPRVGTRTR RHRAVALTAAPWYAAGTIATWRDPWSSSTS" sig_peptide 2852615..2852716 /gene="B1047H05.25" /locus_tag="CMS_2708" /old_locus_tag="CMS2708" /note="Signal peptide predicted for CMS2708 by SignalP 2.0 HMM (Signal peptide probability 0.721) with cleavage site probability 0.390 between residues 34 and 35" misc_feature order(2852651..2852719,2852762..2852830,2852930..2852983) /gene="B1047H05.25" /locus_tag="CMS_2708" /old_locus_tag="CMS2708" /note="3 probable transmembrane helices predicted for CMS2708 by TMHMM2.0 at aa 13-35, 50-72 and 106-123" gene 2852992..2853795 /locus_tag="CMS_2709" /old_locus_tag="CMS2709" /db_xref="GeneID:6158624" CDS 2852992..2853795 /locus_tag="CMS_2709" /old_locus_tag="CMS2709" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711348.1" /db_xref="GI:170783014" /db_xref="GeneID:6158624" /translation="MEFLDVLRSRRTTNGAFLPDPVSEEHQRLLMEVAGRAPSQLNSQ PWRFVLVEERDTIERIAEISGESMTETMSNGTFFERYKHYFRFSQEEMDRRRDGMLFD KLPAPLRPFTTQAFTRRGQRLMNVLRVPQTLGRANRELVAGSPLLIGVMLDRAEERPE SLASFYSTFSMGAAMENVWLTTGAIGMGIQFISFPMEIRAQWTRVEELLRVPPELELM AVYRLGYLPPEARRPAIDWSSRERKRPSQYVFRGTCDTPQEGWDEPAAS" misc_feature 2853010..2853666 /locus_tag="CMS_2709" /old_locus_tag="CMS2709" /inference="protein motif:HMMPfam:PF00881" /note="HMMPfam hit to PF00881, Nitroreductase, score 0.00036" gene 2853882..2854841 /locus_tag="CMS_2710" /old_locus_tag="CMS2710" /db_xref="GeneID:6158256" CDS 2853882..2854841 /locus_tag="CMS_2710" /old_locus_tag="CMS2710" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711349.1" /db_xref="GI:170783015" /db_xref="GeneID:6158256" /translation="MASGAWMRIPSPSTRQRWLLTAASLAFAGILLWSPVGAVTRLVD IAIGPSPLIRVGLPILLIVAVVGIAYLVVAERTAPPAIDVTRQVLRIGRKEWGFSEVT GARIELAGGPGDDTLILRLTTTGDGSCSVVVSTREGVRIDDAQRDALLALVAGSRIAP PRSKDDPNGRFAHVEFPGHLTLEDTAALVDGSGVAEPTSARGQRGQGSGARNVRPAGT PSRNPVSMRAQYVVAGIVTAMGAFFAVAAVRNPTGVFGRTEIPVVGLAIFFLAGGIGV ILVTRRDVRRAAEQRAAVDAARAEADHDGSAEPPEPARPAGGS" sig_peptide 2853882..2853995 /locus_tag="CMS_2710" /old_locus_tag="CMS2710" /note="Signal peptide predicted for CMS2710 by SignalP 2.0 HMM (Signal peptide probability 0.845) with cleavage site probability 0.475 between residues 38 and 39" misc_feature order(2853939..2854007,2854035..2854103,2854569..2854625, 2854653..2854721) /locus_tag="CMS_2710" /old_locus_tag="CMS2710" /note="4 probable transmembrane helices predicted for CMS2710 by TMHMM2.0 at aa 20-42, 52-74, 230-248 and 258-280" gene 2854863..2855432 /locus_tag="CMS_2711" /old_locus_tag="CMS2711" /db_xref="GeneID:6158257" CDS 2854863..2855432 /locus_tag="CMS_2711" /old_locus_tag="CMS2711" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711350.1" /db_xref="GI:170783016" /db_xref="GeneID:6158257" /translation="MRIPAPSYRQRLLFGSGWFLLIVWLSSNPLSLLGRRVGVAAAGA LLLLVITRLAPGLDIDADRGVLRLRGLERPFTDLVGARIELAPLPRESRYDKPRKRPR RDPLVIRLDLDGGARFRVVLAIGPTDTLSAARTTALVAAVRGSRIQAPIASYDPDGRF THLNFPGSLDRDDAVKLIEDPQSASALPR" misc_feature order(2854896..2854955,2854971..2855024) /locus_tag="CMS_2711" /old_locus_tag="CMS2711" /note="2 probable transmembrane helices predicted for CMS2711 by Phobius" gene complement(2857316..2857738) /locus_tag="CMS_2713" /old_locus_tag="CMS2713" /db_xref="GeneID:6158258" CDS complement(2857316..2857738) /locus_tag="CMS_2713" /old_locus_tag="CMS2713" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711351.1" /db_xref="GI:170783017" /db_xref="GeneID:6158258" /translation="MIPIAVEIPARDELLDLYGSVGWSAYTRDPERLERALAGSDLVA TARDADGLLVGLVRTVGDGATICYVQDLLVRPDQQRGGIGRALLEHVRASQPSGVLLV LTTDAGGTEDGDRSHPFYRALGFAPHGERGLAAFSLRV" misc_feature complement(2857361..2857606) /locus_tag="CMS_2713" /old_locus_tag="CMS2713" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 3.6e-06" gene 2857838..2858962 /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /db_xref="GeneID:6158259" CDS 2857838..2858962 /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface protein" /protein_id="YP_001711352.1" /db_xref="GI:170783018" /db_xref="GeneID:6158259" /translation="MHQSRHACTSSSRRTRSGSLAVASLAVAAIAASGLGAALLAPAS AFAATATVGLGTAASYSVLAGQGVTNTGPSTLSADLGTSPSASVTGFPPGVVGGATHA ADAAAGQAQSDLTTAYDDAAGRPTTAAVPADLVGSTLTPGVYTAAGPLANTGTVTLDA QGDPSAVFVIQAPSSLTTGSGSRVSLVNSAQACNVFWQVSSSATLGTNSGFAGTILAL TSVSVGSGATVDGRALARNGAVTLDDDAFTSSTCGTTTSPIGSGSTPVVTPTPAPSPG GGSTGGTTGGTTGGTTGGTTGGTTGGTTGGSTPTPSPTPTAGVPTLPTPPGDVPPPSG HLPRTGGDGARLALELGLGAAALAAGVVAVIAVRLRRRRH" sig_peptide 2857838..2857978 /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /note="Signal peptide predicted for CMS2714 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 between residues 47 and 48" misc_feature order(2857895..2857963,2858876..2858944) /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /note="2 probable transmembrane helices predicted for tmhmm2embl_unknown_000008_2857770_2858894 by TMHMM2.0 at aa 20-42 and 347-369" misc_feature 2858843..2858860 /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." misc_feature 2858843..2858857 /locus_tag="CMS_2714" /old_locus_tag="CMS2714" /note="submitted with no further information" gene 2859116..2860075 /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /db_xref="GeneID:6158260" CDS 2859116..2860075 /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711353.1" /db_xref="GI:170783019" /db_xref="GeneID:6158260" /translation="MTTTSRPARRSSADRPPRPRRSRMARREAVAGYLFISPWIIGFL VFTLGAMVYSLVVSFSDYNLATDVATPVGTENYERLFSDPRVALSLGNTLFYAILAVP FEVCLALLLAILLARLGRGAGIFRTLYYLPKMTPTVATASVFLLLLNGNTGAVNRGLE AIGIDGPQWLIDPAWVKPSIVLMTLWGVSGTMVIFLAALKDVPRELYEVSSLDGAGPV RQFFAITVPMISGAIFFNVVVLTIAALQVFDQAYLLFWRDQTNASPDSSLFYGVYLFQ QAFRSFDFGFAAAMAWLLFVIVLVITLIQVKLSNRFVYYEGDR" sig_peptide 2859116..2859277 /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /note="Signal peptide predicted for CMS2715 by SignalP 2.0 HMM (Signal peptide probability 0.732) with cleavage site probability 0.238 between residues 54 and 55" misc_feature order(2859203..2859271,2859392..2859460,2859497..2859565, 2859653..2859712,2859791..2859859,2859965..2860033) /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /note="6 probable transmembrane helices predicted for CMS2715 by TMHMM2.0 at aa 30-52, 93-115, 128-150, 180-199,226-248 and 284-306" misc_feature 2859371..2860057 /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 5.9e-13" misc_feature 2859710..2859796 /locus_tag="CMS_2715" /old_locus_tag="CMS2715" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene 2860075..2861070 /locus_tag="CMS_2716" /old_locus_tag="CMS2716" /db_xref="GeneID:6158261" CDS 2860075..2861070 /locus_tag="CMS_2716" /old_locus_tag="CMS2716" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711354.1" /db_xref="GI:170783020" /db_xref="GeneID:6158261" /translation="MAVTDRTPDAAATPGAVPAAATGDPRLAAALTPLPSRDPSPGRR DPDRVRRVRSRIGRALITALLVGFALLFLYPFAWLLAASLKPRGEVFDNSLWPRTFTP QNYVEVWEQLPLLGWMGNSLAIALLSAALVSISSALVAFGFAYFRFPGRRILFGLVLA TMMLPGAVTMVPQFLIWKNLGLIGTWIPLFGMNLFGSAFYIFLQRQFFLGLPRELFEA ARLDGASYFGMFRRIALPLSIPSFVIIFIFEFQASWNNLQASLIYLNAGSVEGFTVPL GLSYAMTAFSPTNGGQGDYQLVMVAALLVTLPMLLLFAFGQRYFVEGIATQGRKG" misc_feature order(2860252..2860320,2860444..2860512,2860531..2860599, 2860615..2860683,2860855..2860923,2860966..2861034) /locus_tag="CMS_2716" /old_locus_tag="CMS2716" /note="6 probable transmembrane helices predicted for CMS2716 by TMHMM2.0 at aa 60-82, 124-146, 153-175,181-203, 261-283 and 298-320" misc_feature 2860426..2861037 /locus_tag="CMS_2716" /old_locus_tag="CMS2716" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.2e-13" misc_feature 2860696..2860782 /locus_tag="CMS_2716" /old_locus_tag="CMS2716" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(2861072..2862331) /locus_tag="CMS_2717" /old_locus_tag="CMS2717" /db_xref="GeneID:6158262" CDS complement(2861072..2862331) /locus_tag="CMS_2717" /old_locus_tag="CMS2717" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711355.1" /db_xref="GI:170783021" /db_xref="GeneID:6158262" /translation="MVRFHGAEIGRVERGGRLERIRLFIGPDGGPADVRLTEAFATLP EAEVRTDLASNLFGGYAPEGNQRRALAERHSFDPRDLYATLEQFGSSIAGAVTFHSEA DPPVSPPSYESLSASDLGRLLRRAVKDGDLAVRDDSRSMIQGFQPKVLLTRFAEDGPW LQPHGGSHSTHIVKPQLPSRPSAIHDEHYSHQLARELGLASFRSSIGRAGAATYLAIE RFDRRVSGEAVELVHQEDLAQALSLDWVDDQAKFQDPRDPASARRPSAMRIAEAAASL DEDAVELWIRQLTFRILIGDNDGHAKNVGIIHLPGRDTLSDIYDAVPNLYQPGRIDWN LALAVDGEFDHRRMSVERIVREADSWRVTSRRRIDAVVQDAIERFARTLDATEVPRET TPGMRAGLEWNVTRLLAGQEIGQPRGM" gene complement(2862339..2862620) /locus_tag="CMS_2718" /old_locus_tag="CMS2718" /db_xref="GeneID:6158263" CDS complement(2862339..2862620) /locus_tag="CMS_2718" /old_locus_tag="CMS2718" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711356.1" /db_xref="GI:170783022" /db_xref="GeneID:6158263" /translation="MSIMWGYAHTIMPSHEIRKYSDLGEAIKHVRLRRGMTQSDLAEK LGFERFYVRELETGTRPPLFVTRLFRVLRLLRIRVTVSYDLREEERVDG" misc_feature complement(2862375..2862542) /locus_tag="CMS_2718" /old_locus_tag="CMS2718" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 5.7e-05" misc_feature complement(2862450..2862515) /locus_tag="CMS_2718" /old_locus_tag="CMS2718" /note="Predicted helix-turn-helix motif with score 1371.000, SD 3.86 at aa 36-57, sequence MTQSDLAEKLGFERFYVRELET" gene complement(2862688..2863011) /locus_tag="CMS_2719" /old_locus_tag="CMS2719" /db_xref="GeneID:6158264" CDS complement(2862688..2863011) /locus_tag="CMS_2719" /old_locus_tag="CMS2719" /codon_start=1 /transl_table=11 /product="putative quaternary ammonium compound efflux protein" /protein_id="YP_001711357.1" /db_xref="GI:170783023" /db_xref="GeneID:6158264" /translation="MSWIVLIVSGVLEAVWATALGKSAGFTKLGPSLVFGVAVVLSMV GLAYAMREISTGTAYAVWVGIGAALTVTYAIVTGSEPASVVKVLLLLGLVGCVVGLKV VDTGH" misc_feature complement(order(2862703..2862771,2862781..2862849, 2862868..2862927,2862955..2863011)) /locus_tag="CMS_2719" /old_locus_tag="CMS2719" /note="4 probable transmembrane helices predicted for CMS2719 by TMHMM2.0 at aa 34-53, 63-82, 89-111 and 115-137" misc_feature complement(2862730..2863011) /locus_tag="CMS_2719" /old_locus_tag="CMS2719" /inference="protein motif:HMMPfam:PF00893" /note="HMMPfam hit to PF00893, Small multidrug resistance protein, score 1.4e-14" gene complement(2863137..2864495) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /db_xref="GeneID:6158265" CDS complement(2863137..2864495) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001711358.1" /db_xref="GI:170783024" /db_xref="GeneID:6158265" /translation="MTRTHGTLAVIAAAATATLLAGCGSGGTGAADASFTTEATGTLK AWAFDGADDVGEARLAHAADALSDVTVDLDSTAFDAQKFTTRVASGQTPDVVQMDRQF VATYAAQDLILPLDECYSAHDVDPAERFYESVTNDIRYDDAIWAVPQFFQPPAILLNE CVLSAAGVSGDQFDTSKPDQLLDAVGKVYRESGGDPAVLGLDAVPTAQAALWMLGFGG QLVDDEGKPTLDDDANLPGLEFLTQLSDAQGGYAKGKSFSDAFDTFGDGNQFVKDQVG AQIDAQWYLNVVAPYRDDIDISAVPFRDSDGEPFAVAGGSAFVIPAGAKNKDAACAWM LDLTSQESWEAAGDVRAATVTENGGINTGLFTGSPAADQAIRDAHVVPSGDDGIDQAI ATFYDVVAEGRSIGGSPAGQQIQSELQNAVASTLLGDKTPEQALADAQTAAMRAYEQA AR" sig_peptide complement(2863137..2863226) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /note="Signal peptide predicted for CMS2720 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.474 between residues 30 and 31" misc_feature complement(2863464..2864477) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 1.3e-10" misc_feature complement(2863728..2863751) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(2864409..2864477) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /note="1 probable transmembrane helix predicted for CMS2720 by TMHMM2.0 at aa 7-29" misc_feature complement(2864427..2864459) /locus_tag="CMS_2720" /old_locus_tag="CMS2720" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2864620..2865522) /locus_tag="CMS_2721" /old_locus_tag="CMS2721" /db_xref="GeneID:6158266" CDS complement(2864620..2865522) /locus_tag="CMS_2721" /old_locus_tag="CMS2721" /codon_start=1 /transl_table=11 /product="putative secreted hydrolase" /protein_id="YP_001711359.1" /db_xref="GI:170783025" /db_xref="GeneID:6158266" /translation="MRTRRSLLSRLAPPVIALVGGQGEFASPHRTMARAGRRVLRPGG FAPPPFLRGVRVTARVEGGWHVYEVAPAGPEARRRALYAHGGGWTHEISPFHWWLVAG LARRTGTRFTVPIYPLVPSGTAAEVVERTAELAEALVAEVGPGAVTLMGDSAGGQIAL STAMALRDRGVPAPRDVVLLSPALDLSFTDPLIARIQPTDPWLAVDGMRAAVESWRGD LPVEDPRVSPMHGSLAGLGRVTVFSGTHDILFADARAFERKAAAVGHPVRIHVEPNLL HVYALMPIPEGARARDAMVELLRA" sig_peptide complement(2864620..2864697) /locus_tag="CMS_2721" /old_locus_tag="CMS2721" /note="Signal peptide predicted for CMS2721 by SignalP 2.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.941 between residues 26 and 27" gene complement(2865534..2866523) /gene="glpX" /locus_tag="CMS_2722" /old_locus_tag="CMS2722" /db_xref="GeneID:6158267" CDS complement(2865534..2866523) /gene="glpX" /locus_tag="CMS_2722" /old_locus_tag="CMS2722" /EC_number="3.1.3.11" /note="type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese" /codon_start=1 /transl_table=11 /product="fructose 1,6-bisphosphatase II" /protein_id="YP_001711360.1" /db_xref="GI:170783026" /db_xref="GeneID:6158267" /translation="MTEENYSNPDRNLGMELVRATEAAAIRSAPFIGKGDKNAADGAA VDAMRKFLGTVAFDGLVVIGEGEKDEAPMLFNGEHVGNGFGPACDIAVDPIDGTSLTA AGRMNALSVIAVSDRGSMFDPSAVFYMDKLVTGPEGRGVVDLDRPIGDNIRALAEAKG LAVEDMQVAVLDRPRHADLIAQIRAAGASTRLLLDGDVAGGINAARPDSRIDMCVGIG GTPEGIITACAIKALGGVLLSRLAPKDDAEKQRAIDAGHDLDRILDQDDLVTGDNAYF VATGVTDGALVAGVTRHRGMIRTSSIVLRSHSGTIRRVEADHLVSKWYSPAAG" misc_feature complement(2865570..2866496) /gene="glpX" /locus_tag="CMS_2722" /old_locus_tag="CMS2722" /inference="protein motif:HMMPfam:PF03320" /note="HMMPfam hit to PF03320, GlpX, score 2.8e-162" gene complement(2866582..2867727) /locus_tag="CMS_2723" /old_locus_tag="CMS2723" /db_xref="GeneID:6158726" CDS complement(2866582..2867727) /locus_tag="CMS_2723" /old_locus_tag="CMS2723" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711361.1" /db_xref="GI:170783027" /db_xref="GeneID:6158726" /translation="MSHDVEPSPGEPEPAAASAPHADRAPQRGITPGVLLAAEWSWRL LVIGIAVAAAVWLLVAVKEVVIPFLIGLLVCALLQPLVAALRRRRWPAWLAITSTLLG TAVVISGLVLLLVAQIRTGIPTLQREAMERFESVRDLLAQPPFNVVPSDYDALLASAG KALENSREALLTGVLDAGLGVGHLVTGALLAFFTIVIVLIDGRGIWRFVVSVFPRRAR PAIDGAGRAGWGTLSAFTRVQIFVAAGNAVGIGIAAWLLGLPLAIPIAVLVFLASFIP VVGAIVSGAFAVVIALVFVGPLQAAIMLVAVIGVHLLESHVLQPLVMGGAVHVHPLAV VLSVAAGSYVGGVAGALFAVPAVATLNVMVRYIAGGSWKAGTPAVGS" misc_feature complement(2866624..2867607) /locus_tag="CMS_2723" /old_locus_tag="CMS2723" /inference="protein motif:HMMPfam:PF01594" /note="HMMPfam hit to PF01594, Protein of unknown function UPF0118, score 1.7e-45" misc_feature complement(order(2866666..2866734,2866792..2866860, 2866879..2866947,2866957..2867025,2867128..2867196, 2867383..2867451,2867470..2867538,2867551..2867610)) /locus_tag="CMS_2723" /old_locus_tag="CMS2723" /note="8 probable transmembrane helices predicted for CMS2723 by TMHMM2.0 at aa 79-98, 103-125, 132-154,217-239, 274-296, 300-322, 329-351 and 371-393" misc_feature complement(2867179..2867214) /locus_tag="CMS_2723" /old_locus_tag="CMS2723" /note="PS00136 Serine proteases, subtilase family,aspartic acid active site." gene complement(2868329..2869291) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /db_xref="GeneID:6158268" CDS complement(2868329..2869291) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711362.1" /db_xref="GI:170783028" /db_xref="GeneID:6158268" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2868341..2868883) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" misc_feature complement(2868968..2869033) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /note="Predicted helix-turn-helix motif with score 991.000, SD 2.56 at aa 87-108, sequence AGPARLAPVTGVPSRTISRILR" misc_feature complement(2869033..2869154) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 87-46, sequence NRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRA" misc_feature complement(2869154..2869219) /locus_tag="CMS_2724" /old_locus_tag="CMS2724" /note="Predicted helix-turn-helix motif with score 1740.000, SD 5.11 at aa 25-46, sequence RPVAHVARELGVSRQCAHRWVN" gene complement(2869389..2870384) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /db_xref="GeneID:6158269" CDS complement(2869389..2870384) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711363.1" /db_xref="GI:170783029" /db_xref="GeneID:6158269" /translation="MSWLVMAAIFLVLELSGAADDFNVVGTAVFGTILFGIALFLFSL AVEGERKAKDRVITILVTVAFVLALIPLISLVFTAVTNGSARFDPLFFNSSLRNVVGE GGGGLHAIIGTLIVTAIAAVISIPVGLMAAIYLAEYGRGRLARAITFFVDVMTGIPSI VAGLFAYALLVIFLGPGVRLGFGGALALSVLMIPVVVRSAEEMLKLVPNELREASYAL GVPKWLTIMKIVLPTSLAGIVTGVMLAIARVIGETAPLLIVAGFTQSMNYNPFEDQMM TLPVFVFRQYADQGSDAFAYVDRAWTGALVLILIVMALNIVARLIARIFAPKLGR" misc_feature complement(2869392..2870057) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 8.1e-27" misc_feature complement(order(2869419..2869487,2869632..2869700, 2869794..2869862,2869872..2869940,2869977..2870045, 2870142..2870210,2870247..2870315)) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /note="7 probable transmembrane helices predicted for CMS2725 by TMHMM2.0 at aa 24-46, 59-81, 114-136, 149-171,175-197, 229-251 and 300-322" misc_feature complement(2869689..2869775) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." misc_feature complement(2870178..2870225) /locus_tag="CMS_2725" /old_locus_tag="CMS2725" /note="PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature." gene complement(2870489..2871499) /locus_tag="CMS_2726" /old_locus_tag="CMS2726" /db_xref="GeneID:6158270" CDS complement(2870489..2871499) /locus_tag="CMS_2726" /old_locus_tag="CMS2726" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711364.1" /db_xref="GI:170783030" /db_xref="GeneID:6158270" /translation="MTTAAPQPPQAPESDRPRDVAAAPAARRSSQDAKPKARVGDRVF SGLSRGSGTLILVILAAVALFLIVQSIPALTAPPAEVSGGGGFWAYVGPLMFGTVYAA ALAMLMAVPVAIGIALFISHYAPRRLAQGLGYIIDLLAAVPSVVFGLWGIAVLAKFLQ PFYVFLTDTFGWFPLFAGPVSGTGRTIFTVAVVLAVMILPIVTALSREVFLQTPKLHE EAALALGATRWEMIQTAVLPFGRPGIISASMLGLGRALGETMAVAIVLSPAAVVNFAW FQSTNSNTIAANIALSFPEAYGLKINELIASGLMLFVITLAVNMLARYIISRRKAFSR AN" misc_feature complement(2870507..2871217) /locus_tag="CMS_2726" /old_locus_tag="CMS2726" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 4.7e-13" misc_feature complement(order(2870522..2870590,2870669..2870737, 2870885..2870953,2871038..2871106,2871140..2871208, 2871296..2871364)) /locus_tag="CMS_2726" /old_locus_tag="CMS2726" /note="6 probable transmembrane helices predicted for CMS2726 by TMHMM2.0 at aa 46-68, 98-120, 132-154, 183-205,255-277 and 304-326" misc_feature complement(2870786..2870872) /locus_tag="CMS_2726" /old_locus_tag="CMS2726" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(2871606..2872703) /locus_tag="CMS_2727" /old_locus_tag="CMS2727" /db_xref="GeneID:6158271" CDS complement(2871606..2872703) /locus_tag="CMS_2727" /old_locus_tag="CMS2727" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711365.1" /db_xref="GI:170783031" /db_xref="GeneID:6158271" /translation="MKISRLSSAAALAAVTALALSSCASNEAPAEGGDASASTLSGTL NGIGATSQGAAQEAWNAAFQTANPDVTVTYAGEGSGAGREAFMAGGQNAAFAGSDRAL KTDELTKTFGQCADGVKPIDLPAYISPIALIFQVEGVKDLNLDAATTAGIFKGTITKW NDPAIVALNPDATLPDAGITAVHRSDDSGTTENFAKYLNTTAKDVWDAEPKGVWPYQG GEAAQGTTGVVDAVKGGSNIIGYADASKAGTLGVAKIKVGDEFVGYSPEAAAAVVEAS PEAEGREANDVVFDIDYSTTESGVYPIVLVSYLIACQEYKEPAVGELVKAYLGYVTST EGQALAAEKAGAAPLSDTVAAQVKTAVESIK" sig_peptide complement(2871606..2871716) /locus_tag="CMS_2727" /old_locus_tag="CMS2727" /note="Signal peptide predicted for CMS2727 by SignalP 2.0 HMM (Signal peptide probability 0.984) with cleavage site probability 0.507 between residues 62 and 63" misc_feature complement(2871690..2872679) /locus_tag="CMS_2727" /old_locus_tag="CMS2727" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 4.5e-09" misc_feature complement(2872635..2872667) /locus_tag="CMS_2727" /old_locus_tag="CMS2727" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2872906..2873856) /locus_tag="CMS_2728" /old_locus_tag="CMS2728" /db_xref="GeneID:6158272" CDS complement(2872906..2873856) /locus_tag="CMS_2728" /old_locus_tag="CMS2728" /codon_start=1 /transl_table=11 /product="putative NUDIX hydrolase" /protein_id="YP_001711366.1" /db_xref="GI:170783032" /db_xref="GeneID:6158272" /translation="MDDVTPAPSVFAAGAVVWRVVEGRIRVLIIHRTRRRDTSLPKGK VDPGETLPQTAVREVHEETGLRVALGVPLGAIEYGISGGRRKSVSYWAAEATDAMVEA GRFEPDDEVESVEWISIPNARKRLDYPGEVQILDLFAGLVETGSHRSFALIALRHGHA VQPYEWDGPDGGRPLSARGRDQARAIVPTLLAFGPRVVTSSTAERCLQTVAPLAEALG RRVKENAGISQDAYEIDGGSVRETVAKRVRKARSAVLCSHSPVLPEILHEIALATATP SASRMPRAGMLSPAEFSVVHLSASDPEAGILAVETYGPSA" misc_feature complement(2873179..2873229) /locus_tag="CMS_2728" /old_locus_tag="CMS2728" /note="PS00216 Sugar transport proteins signature 1." misc_feature complement(2873434..2873832) /locus_tag="CMS_2728" /old_locus_tag="CMS2728" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 5e-22" misc_feature complement(2873671..2873730) /locus_tag="CMS_2728" /old_locus_tag="CMS2728" /note="PS00893 mutT domain signature." gene complement(2873888..2876071) /gene="ppk" /locus_tag="CMS_2729" /old_locus_tag="CMS2729" /db_xref="GeneID:6158273" CDS complement(2873888..2876071) /gene="ppk" /locus_tag="CMS_2729" /old_locus_tag="CMS2729" /EC_number="2.7.4.1" /note="catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate" /codon_start=1 /transl_table=11 /product="polyphosphate kinase" /protein_id="YP_001711367.1" /db_xref="GI:170783033" /db_xref="GeneID:6158273" /translation="MDSETYIGDAKAVAESLDDFDDEDELLEDDGTLPEGRFLDRELS WLAFNRRVLELAEDPELPVLERANFLAIFASNLDEFFMVRVAGLKRRIATGLAVPTNI GRTPAEVLSAINETAYRLQVRHAAAFNDSVRPALEEHGIRIVRWDSLDEAQQDRLHEL FSEQVFPVLMPLAVDPAHPFPYISGLSLNLSVRIRNPKTNRQEFARIKVPQMLPRFMP LTPDTRSGPIDFIALEDLIANQLQTLFPGMEIVEHHVFRVTRNEDVQIEEDETENLIQ ALEKELLRRRFGPPIRLEISDDMDAVTLDLLMRELDITEQEVFTLPSPLDLGGLFDLA KLDRPALHYPNNVPTTAVALKPAEDNSRADIFRSIAQQDILLHHPYESFTTSVQAFLE QAAADPHVLAIKQTLYRTSGDSPIVEALIDAAEAGKQVLALVEIKARFDEQANITWAR KLEKAGVHVVYGVAGLKTHCKLALVIRQEKGGVLRHYSHIGTGNYNPKTSRIYEDLGL LTADDVVGKDLTRLFNELSGYGIEKKFKRLLVAPLHLRKGLLKRIAVETQNALDGKPS GIRIKVNSIVDEKIIDALYRASNAGVPVQVWVRGICSLTPGQPGLSENIEVRSILGRY LEHSRVFSFVNDGDQAAFIGSADMMHRNLDRRVEALVRLVDPAHLQEIEDLFDRAMAD TTSAWILDSDGEWTRRNKGADGTTLEDLQTAVMGIVTKRKRRVLR" misc_feature complement(2873936..2875972) /gene="ppk" /locus_tag="CMS_2729" /old_locus_tag="CMS2729" /inference="protein motif:HMMPfam:PF02503" /note="HMMPfam hit to PF02503, Polyphosphate kinase, score 0" gene complement(2876165..2877079) /locus_tag="CMS_2730" /old_locus_tag="CMS2730" /db_xref="GeneID:6158875" CDS complement(2876165..2877079) /locus_tag="CMS_2730" /old_locus_tag="CMS2730" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711368.1" /db_xref="GI:170783034" /db_xref="GeneID:6158875" /translation="MSAFPPPPEPDAPRVAHVEPAPDAVRGILALADRARADDGVAPF NEQTRLTLGADGGPTLLLAHGTDDDPLGAAVVAHGDAGIEAELVVDPAHRRRGVGRAL LDAVLAEAAGSPVSVWAHGDHPAARALADATGLDRARELLQLRASVAEARTGLGERQM PAGVALSSFTADDADDWVALNARAFASHPEQGRMTRGDLDDRVAEAWFDPASLLLARD ADGRLAGFHWLKVDGGQAEVYVLGVDPDRAARGLGSALLAAGLDLLAERGHDEVDLYV EADNTPALALYRRAAFRDAAVDVQYRRA" misc_feature complement(2876201..2876437) /locus_tag="CMS_2730" /old_locus_tag="CMS2730" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.2e-15" misc_feature complement(2876672..2876896) /locus_tag="CMS_2730" /old_locus_tag="CMS2730" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 4.8e-07" gene complement(2877048..2877740) /locus_tag="CMS_2731" /old_locus_tag="CMS2731" /db_xref="GeneID:6158274" CDS complement(2877048..2877740) /locus_tag="CMS_2731" /old_locus_tag="CMS2731" /codon_start=1 /transl_table=11 /product="putative transcriptional regulatory protein" /protein_id="YP_001711369.1" /db_xref="GI:170783035" /db_xref="GeneID:6158274" /translation="MAQLLILTSSADTDVLPALGLLSHRTRHIQADAASLVNAPAADL VLVDARRDLASAKSLCKILTTTGGGTPLILVLTEGGLTAVSADWGATDVILDSAGPAE VDARVRLVIGRAALEHTGSKIQASGVVIDEASYSAKVHGKPLDLTFKEFELLRFFASH PSRVFTREQLLSEVWGYDYFGGTRTVDVHVRRLRAKLGDLESLIGTVRNVGYRFNVYE EDSERVPAPAGA" misc_feature complement(2877099..2877320) /locus_tag="CMS_2731" /old_locus_tag="CMS2731" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 5.9e-24" gene 2877794..2878060 /locus_tag="CMS_2732" /old_locus_tag="CMS2732" /db_xref="GeneID:6158275" CDS 2877794..2878060 /locus_tag="CMS_2732" /old_locus_tag="CMS2732" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711370.1" /db_xref="GI:170783036" /db_xref="GeneID:6158275" /translation="MTSPLRSLVPVWLAAAVGAVVVAIAVGPDAAPRWFPLVLAVCVI ATFVIQLALPRKTGFVDRAVGSVVGAVLVLAVATAVVLLVPVAA" sig_peptide 2877794..2877883 /locus_tag="CMS_2732" /old_locus_tag="CMS2732" /note="Signal peptide predicted for CMS2732 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.540 between residues 30 and 31" misc_feature order(2877812..2877871,2877884..2877952,2877986..2878054) /locus_tag="CMS_2732" /old_locus_tag="CMS2732" /note="3 probable transmembrane helices predicted for CMS2732 by TMHMM2.0 at aa 7-26, 31-53 and 65-87" gene 2878104..2878220 /locus_tag="CMS_2733" /old_locus_tag="CMS2733" /db_xref="GeneID:6158276" CDS 2878104..2878220 /locus_tag="CMS_2733" /old_locus_tag="CMS2733" /codon_start=1 /transl_table=11 /product="putative small membrane protein" /protein_id="YP_001711371.1" /db_xref="GI:170783037" /db_xref="GeneID:6158276" /translation="MSSLLALELFFTGLLVLASLSIGWVSLVVVYNLFRGQR" misc_feature 2878131..2878199 /locus_tag="CMS_2733" /old_locus_tag="CMS2733" /note="1 probable transmembrane helix predicted for CMS2733 by TMHMM2.0 at aa 10-32" gene 2878232..2878831 /locus_tag="CMS_2734" /old_locus_tag="CMS2734" /db_xref="GeneID:6158277" CDS 2878232..2878831 /locus_tag="CMS_2734" /old_locus_tag="CMS2734" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711372.1" /db_xref="GI:170783038" /db_xref="GeneID:6158277" /translation="MIEIPTGLPAELVPLSWLLGVWEGSGVVEYAVGDETVRREFGQR ISFSHDGLPHLNYSSYAWIEGDDGPVPFVTETGYWRLRRRVTDGDPGPAMLPPTDERP FTTAEEVETLCNADGGFDVEVALVHPGGVSELYVGQVKSARIDLATDAVLRTEGAKSY TGATRLYGFVERDLLWAWDIAALGQPLRTHASGRVSHVD" gene 2878821..2879975 /locus_tag="CMS_2735" /old_locus_tag="CMS2735" /db_xref="GeneID:6158278" CDS 2878821..2879975 /locus_tag="CMS_2735" /old_locus_tag="CMS2735" /codon_start=1 /transl_table=11 /product="putative aminomethyltransferase" /protein_id="YP_001711373.1" /db_xref="GI:170783039" /db_xref="GeneID:6158278" /translation="MSTEPDPAVARSPFLDLPGAVAADGPDAGVPAHLGSLVQEQRAL AAGTAIVDLSHRAVLSVTGEDRLTWLDSITSQSLRGLAPGDSAETLFLDQNGRLEHAV GVLDDGVSTWLLLGAGDAASLLAYLQRMRFMLRVEPADRTAEMAVIGTLGEPDLPVAA PAGVPLVWRDPWAHVVPGGHQYAAAASHPGEGWTWSERLVPRSELPGVAARAASGDLP VAGVLAAEALRIAAWRPRFATEVDDRTIPHELDWLRSAVHLSKGCYRGQETVAKVHNL GRPPRRLVLLQLDGSDAVLPGAGSEVRLPAADDGAPGEVVGSVTSSALHHELGPVALA VVRRNVDPALQLEVVADDVRVQAMQDVIVPTDAGRSADVPRLPRLGAVRR" misc_feature 2878968..2879915 /locus_tag="CMS_2735" /old_locus_tag="CMS2735" /inference="protein motif:HMMPfam:PF01571" /note="HMMPfam hit to PF01571, Glycine cleavage T protein (aminomethyl transferase), score 7.6e-08" gene 2879959..2881080 /locus_tag="CMS_2736" /old_locus_tag="CMS2736" /db_xref="GeneID:6158279" CDS 2879959..2881080 /locus_tag="CMS_2736" /old_locus_tag="CMS2736" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711374.1" /db_xref="GI:170783040" /db_xref="GeneID:6158279" /translation="MRSAAERARERSARAARTLRHRADPRAALLRLWGSAPAALQIAI AATGGWAFAHHVLGHDTPLLATTVTITSLGFVRDARPVRVLETAIGMTVGITLSEVLL LGIGRGAWQLFVIILATLLVARLLSSNAAFAVAAGVQAVLVALLPAPPGGVFVRSVDG LVGGAVALLATALIPRDPRRQALREARRVFSECSYALTSLVTALRLGDATAADRALDR LRRTQPLIDAWSAAADSALSIARISPFLRRHVPELREQRRVLDGMDLAVRNLRVISRR IDFLVVDGVRRPMLAELLATVSNGVNLLGQSLADPSAAPLAQQNLVLVAVRLDPRELI PGAPVGEVMLVMLLRPLLVDLQVASGIDADTARRALPEV" sig_peptide 2879959..2880093 /locus_tag="CMS_2736" /old_locus_tag="CMS2736" /note="Signal peptide predicted for CMS2736 by SignalP 2.0 HMM (Signal peptide probability 0.684) with cleavage site probability 0.578 between residues 45 and 46" misc_feature order(2880043..2880111,2880256..2880324,2880343..2880402, 2880412..2880480) /locus_tag="CMS_2736" /old_locus_tag="CMS2736" /note="4 probable transmembrane helices predicted for CMS2736 by TMHMM2.0 at aa 29-51, 100-122, 129-148 and 152-174" repeat_region complement(2881139..2881686) gene 2881826..2883220 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /db_xref="GeneID:6158280" CDS 2881826..2883220 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711375.1" /db_xref="GI:170783041" /db_xref="GeneID:6158280" /translation="MRITRPTIICTLAVVALAAAMAAPAPAQAAAAPYRVEAAAPKGQ VAVEEVTVVLVDPQGVAPDYTREDVASNLAKVDAYYANETGGRVRVHATSISDWQVPD DPGVRCDDFASVNAFAQRYSGFTPGPDAHLMAMVPHDDACAQFSNGSEGEGVNDGGFV FIGQDLPTTLAHELGHNMSLFHASSVRCSDSWDYDERAMPASCTRSEYGNDADLMGNA YTFLPFTAGTLDRLGLISHRVVPTCGATRRIDIQTMSSGFDAQRIVSWADPEDPSVSW FVQYRDVVDGQEYAAVDDSPYADRDIRPSGVQLSRTDPLYPEATSIAVRPGDTSVTAQ RLVPGDEADLRHGMSVSVVGMDEDAHLATVDVTVPCGAGGRTVEPTRSDARSIPSGAI MQQAPGMPSMLGEPSGRPGAAAMPGMPAMPAMPGMSAMSDIDHAAMGMQPPGAATISV PGPRWNVARILRAS" sig_peptide 2881826..2881912 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /note="Signal peptide predicted for CMS2737 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.878 between residues 53 and 54" misc_feature 2881832..2881900 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /note="1 probable transmembrane helix predicted for CMS2737 by TMHMM2.0 at aa 27-49" misc_feature 2882330..2882359 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." misc_feature 2882501..2882530 /locus_tag="CMS_2737" /old_locus_tag="CMS2737" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." gene complement(2883260..2884084) /locus_tag="CMS_2738" /old_locus_tag="CMS2738" /db_xref="GeneID:6158281" CDS complement(2883260..2884084) /locus_tag="CMS_2738" /old_locus_tag="CMS2738" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711376.1" /db_xref="GI:170783042" /db_xref="GeneID:6158281" /translation="MPVPASPVGSVTRGTTNTNRLRRVDRWIATLDSLRTADAPLVVD LGYGASGITALEMHRRLRATRPDVRVVGIEIEPGRVARAREQLAAWPDASARERISFV RGGFEVPLPGGERATVIRAFNVLRQYDEADVPAAWARMAARLAPGGSVVEGTCDEIGR VASWVDVREDGPRSLTVSLRLAGLELPSIVAERLPKALIHRNVPGERVHEVLALLDRS WILSAPLGVYGPRQQWLGAVRRMRDAGVPVEGGHARWRLGELTVPWSAVAPQPDRP" gene 2884120..2884875 /gene="gpmA" /locus_tag="CMS_2739" /old_locus_tag="CMS2739" /db_xref="GeneID:6158282" CDS 2884120..2884875 /gene="gpmA" /locus_tag="CMS_2739" /old_locus_tag="CMS2739" /EC_number="5.4.2.1" /note="2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase" /protein_id="YP_001711377.1" /db_xref="GI:170783043" /db_xref="GeneID:6158282" /translation="MAEPRTLVLLRHGNSDWNQKNLFTGWVDVELSEQGVAEGQRAGE LLAESGILPDVLHTSVLIRAIDTANIALKRAGRSWIPVQRTWRLNERHYGALQGKDKA QTLAEYGPEQFATWRRSFDVPPPPIADDDEYSQSADPRYADLGDTLPRTECLKDVIER MLPYWESDIQPDLASGRTVLVTAHGNSLRALVKHLDGISDADIAELNIPTGIPLVYRL DEDFRPIVPGGEYLDPEAAAAGAAAVAAQGSKK" misc_feature 2884132..2884803 /gene="gpmA" /locus_tag="CMS_2739" /old_locus_tag="CMS2739" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 1.8e-121" gene complement(2884963..2885607) /gene="phoU" /locus_tag="CMS_2740" /old_locus_tag="CMS2740" /db_xref="GeneID:6158734" CDS complement(2884963..2885607) /gene="phoU" /locus_tag="CMS_2740" /old_locus_tag="CMS2740" /codon_start=1 /transl_table=11 /product="putative phosphate transport protein" /protein_id="YP_001711378.1" /db_xref="GI:170783044" /db_xref="GeneID:6158734" /translation="MFQQELHEVQERLIEISALVAISIENATRAFNESNVSLAETVIE QDRRIDELATSLDELAINILARQQPVARDLRIVVSALRISASLERMGDLAEHIAQLSR YRFPDKVVPKSLRPTFLELGQLDVAIARKLTDLLTTEDAKLAEEIRNDDDRIDELHLS VFDKVLGETWKGAAVDTVDSTLASRYHERFADHAVSIAKTVQYLATGDWVQADA" misc_feature complement(2885005..2885256) /gene="phoU" /locus_tag="CMS_2740" /old_locus_tag="CMS2740" /inference="protein motif:HMMPfam:PF01895" /note="HMMPfam hit to PF01895, PhoU, score 3.3e-13" misc_feature complement(2885305..2885571) /gene="phoU" /locus_tag="CMS_2740" /old_locus_tag="CMS2740" /inference="protein motif:HMMPfam:PF01895" /note="HMMPfam hit to PF01895, PhoU, score 7.5e-23" gene 2885835..2886983 /locus_tag="CMS_2741" /old_locus_tag="CMS2741" /db_xref="GeneID:6158867" CDS 2885835..2886983 /locus_tag="CMS_2741" /old_locus_tag="CMS2741" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001711379.1" /db_xref="GI:170783045" /db_xref="GeneID:6158867" /translation="MVLVCLLIGLAVGAGFVWLLHHAADRGDRAVEITNPVVPDGVDE VLEALESAGIVLDPSNNVMKASPGAISSGLVFHQALVHPELVTMVDRVRRSGEPLAEE VSLARGPFGAAEFQMHVRVARLGTRYVLLLAQDRTESHRLDQVRRDFVANISHELKTP IGAVGLLAEALDSCADDAVQVRRFAARLTTESARLARITQEIIELSRLEAANALEKAE PVDVDHVISVALDQVRLGAELRGIELARGKRSRSTVYGDEALLVVAVANLLSNAVNYS PDGSRVGIGVMVDDGAVEVVVADQGIGIPEDEQSRIFERFFRVDQARARDTGGTGLGL SIVKHVVQNHGGDVRVWSRPGRGSTFTIRLPEASQTPALAGTDIGEPT" misc_feature 2885838..2885906 /locus_tag="CMS_2741" /old_locus_tag="CMS2741" /note="1 probable transmembrane helix predicted for CMS2741 by TMHMM2.0 at aa 2-24" misc_feature 2886267..2886467 /locus_tag="CMS_2741" /old_locus_tag="CMS2741" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 5.6e-15" misc_feature 2886600..2886935 /locus_tag="CMS_2741" /old_locus_tag="CMS2741" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 6.1e-45" gene 2886980..2887660 /locus_tag="CMS_2742" /old_locus_tag="CMS2742" /db_xref="GeneID:6158283" CDS 2886980..2887660 /locus_tag="CMS_2742" /old_locus_tag="CMS2742" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001711380.1" /db_xref="GI:170783046" /db_xref="GeneID:6158283" /translation="MTRIMLVEDEASLSEPLAFLLQREGYEVDVVEDGPAAVAAFEKD GTDLILLDLMLPGLPGTEVCREIRTRSAVPIIMLTAKDSEVDIVVGLELGADDYVTKP YSTRELLARIRAVLRRRVEVDDEPLNVLEVGSVRMDVERHTVEVDGREIAMPLKEFEL LELLLRNAGRVLTRGQLIDRVWGSDYFGDTKTLDVHIKRIRSKIEREPSDPVLLVTVR GLGYRFEA" misc_feature 2886983..2887339 /locus_tag="CMS_2742" /old_locus_tag="CMS2742" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 6.3e-40" misc_feature 2887421..2887651 /locus_tag="CMS_2742" /old_locus_tag="CMS2742" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 1.3e-26" gene complement(2887747..2888313) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /db_xref="GeneID:6158284" CDS complement(2887747..2888313) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711381.1" /db_xref="GI:170783047" /db_xref="GeneID:6158284" /translation="MRARTASPIVLAALIAVGTSSCTFITPQATQISYFPSDGFDATV GDIEVRNAILLTEGGSSAGASLVVTLVNNSGDSLRVAFQHELTEGSADRETRTVTAAP GLTKFGAEDSQRITFDSVDPTPGSLTKIYIQYGDAEGVEMDVPVLNGDQETYTNLVPG ETGSTPDTKVTTTPGTTEGDEGLEDSTN" sig_peptide complement(2887747..2887848) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /note="Signal peptide predicted for CMS2743 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.439 between residues 34 and 35" misc_feature complement(2888119..2888154) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /note="PS00777 Glycosyl hydrolases family 11 active site signature 2." misc_feature complement(2888227..2888295) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /note="1 probable transmembrane helix predicted for CMS2743 by TMHMM2.0 at aa 7-29" misc_feature complement(2888248..2888280) /locus_tag="CMS_2743" /old_locus_tag="CMS2743" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 2888479..2888961 /locus_tag="CMS_2744" /old_locus_tag="CMS2744" /db_xref="GeneID:6158285" CDS 2888479..2888961 /locus_tag="CMS_2744" /old_locus_tag="CMS2744" /codon_start=1 /transl_table=11 /product="putative transcription factor regulator" /protein_id="YP_001711382.1" /db_xref="GI:170783048" /db_xref="GeneID:6158285" /translation="MLFEVGETVVYPHHGAATIIEVKKRVIRGVEKLYLKLDVNQGGL QIEVPAENVDMVGVRDVIGREGVESVFAVLRAEFTEEPTNWSRRYKANLEKLASGDVL KVAEVVRDLWRRNQDRGLSAGEKSMLQKARGILVGELALAEKTDEEHASTLLDEVLAS" misc_feature 2888482..2888814 /locus_tag="CMS_2744" /old_locus_tag="CMS2744" /inference="protein motif:HMMPfam:PF02559" /note="HMMPfam hit to PF02559, Transcription factor CarD,score 4.8e-28" gene 2889021..2890253 /gene="ispDF" /locus_tag="CMS_2745" /old_locus_tag="CMS2745" /db_xref="GeneID:6158286" CDS 2889021..2890253 /gene="ispDF" /locus_tag="CMS_2745" /old_locus_tag="CMS2745" /EC_number="4.6.1.12" /codon_start=1 /transl_table=11 /product="IspD/IspF bifunctional enzyme [includes: 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase" /protein_id="YP_001711383.1" /db_xref="GI:170783049" /db_xref="GeneID:6158286" /translation="MSHDPVVPSASVPADGAQDGPRLGVVVVAAGSGTRLGAGIPKAL VEVGGATLLARSLGSVLGLAEEAHVVVVAPETHLAETTAVVDAVAGVARGSVAVVVGG ATRQGSVAAGLAALAGSVDTVLVHDAARALTPAALFAAVAVAVRAEGAGIVPGLPVTD TVKRLDPDGECLGTVDRSDLVGVQTPQGFPRAALDAAYARADAEHTDDAALFQASGGR VRVIPGDALAFKVTTAWDLRRAEELVARDAGTGSAASRLRSGIGTDVHATDATQPLWL AGLHWPGQPGLAGHSDGDAVSHAMCDALLSAAGLGDIGGVFGTDDPELDGAHGEVFLR RTAELVRGAGYRIVNVAVQVMAVRPKLSPRRAEAERILSAAVGAPVSLAGTTTDGLGF TGRGDGVAAVATALVERV" misc_feature 2889087..2889758 /gene="ispDF" /locus_tag="CMS_2745" /old_locus_tag="CMS2745" /inference="protein motif:HMMPfam:PF01128" /note="HMMPfam hit to PF01128,4-diphosphocytidyl-2C-methyl-D-erythritol synthase, score 3.4e-54" misc_feature 2889387..2889410 /gene="ispDF" /locus_tag="CMS_2745" /old_locus_tag="CMS2745" /note="PS01295 Uncharacterized protein family UPF0007 signature." misc_feature 2889789..2890250 /gene="ispDF" /locus_tag="CMS_2745" /old_locus_tag="CMS2745" /inference="protein motif:HMMPfam:PF02542" /note="HMMPfam hit to PF02542, MECDP-synthase, score 2.4e-59" gene 2890337..2891791 /gene="cysS" /locus_tag="CMS_2746" /old_locus_tag="CMS2746" /db_xref="GeneID:6158773" CDS 2890337..2891791 /gene="cysS" /locus_tag="CMS_2746" /old_locus_tag="CMS2746" /EC_number="6.1.1.16" /note="catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="YP_001711384.1" /db_xref="GI:170783050" /db_xref="GeneID:6158773" /translation="MTLRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRS ALAYDQLRRWLAYRGLDVTLVRNVTDIDDKVIDNARRGQEAGGTEEWWALAYRVELEF SRAYAALGILPPSYEPRATASIGEMQAIIGRLVERGHAYPADDGSGDVYFDTASWPEY GELTRQRAADMEAAADADPRAKRDVRDFALWKGAKPGEPASASWPSPWGAGRPGWHIE CSAMSTRYLGAEFDIHGGGLDLRFPHHENELAQSRAAGDPFARYWLHNGLVAVAGQKM SKSLGNSLFAADLLASARPVVVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDR SARRLAGTRFQAEPAATDGAPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDA GDLQEAASLRADVSAMVAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREA RDFALADRIRQELAEAGITIEDSPGGSHWSIDGE" misc_feature 2890379..2891305 /gene="cysS" /locus_tag="CMS_2746" /old_locus_tag="CMS2746" /inference="protein motif:HMMPfam:PF01406" /note="HMMPfam hit to PF01406, Cysteinyl-tRNA synthetase,class Ia, score 9.2e-157" gene 2891781..2892854 /locus_tag="CMS_2747" /old_locus_tag="CMS2747" /db_xref="GeneID:6158652" CDS 2891781..2892854 /locus_tag="CMS_2747" /old_locus_tag="CMS2747" /codon_start=1 /transl_table=11 /product="putative tRNA/rRNA methyltransferase" /protein_id="YP_001711385.1" /db_xref="GI:170783051" /db_xref="GeneID:6158652" /translation="MANKPSRSGAVRKTKKGPLKGSGGQGRQALEGKKPTPKAEDRPY HPAGKRKLAKDRYEAASAGANRGRDERAERSAAPRSAAPRARATDRPAGADAPRARRA KQQDESEVVTGRNSVVEALRAKIPATALYIASRIEYDDRVKEVLSLATGRGIPVLEVM RPELDRIAGHDAVHQGLALKVPPYEYADAIELLDKTISRGQVPLMVALDGITDPRNLG AIIRSVAAFGGHGVIVPQRRSVGLTASAWKTSAGAAARTPVAMASNLTQTLKALKQRG VFVVGLDGGGDMSLHEFTLADRPIVVVVGSEGKGLSRLVTETCDTIVSIPIGASTESL NAGIAASVTLYEIGKLRAAARRK" misc_feature 2892387..2892815 /locus_tag="CMS_2747" /old_locus_tag="CMS2747" /inference="protein motif:HMMPfam:PF00588" /note="HMMPfam hit to PF00588, tRNA/rRNA methyltransferase (SpoU), score 1.9e-40" gene complement(2892930..2894234) /locus_tag="CMS_2748" /old_locus_tag="CMS2748" /db_xref="GeneID:6158287" CDS complement(2892930..2894234) /locus_tag="CMS_2748" /old_locus_tag="CMS2748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711386.1" /db_xref="GI:170783052" /db_xref="GeneID:6158287" /translation="MAGSLNITAATVDPALLDLPWQLPLDEWPSSAIATLPKGISRHL VRFANLSGYVIAIKETTDEMARGEYDMLRTLQRLEIPCVEPVAVIMNRTDEDGDPLKS VLVTRHLKFSLPYRALFSQQLRPDTATRLVDALAVLLVRLHMIGFFWGDVSLSNTLFR RDAGAFAAYLVDAETGKLFNGGLSNGQRENDLEIARVNIAGELMDLEAGGRIEEGLDP LETSTRIVAQYRTLWKELTGREEFPTSERWRINERVDRLNDLGFDIEELAIRTTAEGS QVRIQPKVVDAGHHQRRLLRLTGVDAQENQARRLLNDLDSYTAAADKQDLDEEMVAHE WLARVFEPVVRAIPRDLRGKLEPAEVFHQLLEHRWYMSQKTNRDIPLAEAVTAYVQDI LRHRRDEATVIDPPTESIGVIEDESEVPITEAEAAEDWRTKV" gene complement(2894336..2895499) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /db_xref="GeneID:6158288" CDS complement(2894336..2895499) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711387.1" /db_xref="GI:170783053" /db_xref="GeneID:6158288" /translation="MHHIHHHGSSGTYLPVKENTEMASVTFDKATRLYPGSTRPAVDQ IDLEVADGEFLVLVGPSGCGKSTTLRMLAGLEEVNDGNIFIGDRNVTDVPPKDRDIAM VFQNYALYPHMTVAENMGFALKIAGVGKDERATRVLEAAKLLDLEPYLSRKPKALSGG QRQRVAMGRAIVRQPQVFLMDEPLSNLDAKLRVQTRTQIASLQRRLGVTTVYVTHDQT EALTMGDRIAVLKDGVLQQVGTPRDLYEKPQNVFVAGFIGSPAMNLFTANVVDGGVQF GTAVVPVERDVLTNATGGAVTIGVGPEDVVVSTSQGQGLSVTVDLVEELGADGYLYGH TDIEGKRTDLVARVDGRLHPNAGDTVFITPQPGHLHAFDAESGLRLNAPVAAG" misc_feature complement(2894387..2894575) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /inference="protein motif:HMMPfam:PF03459" /note="HMMPfam hit to PF03459, TOBE, score 2.3e-07" misc_feature complement(2894801..2895346) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.6e-59" misc_feature complement(2894987..2895031) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /note="PS00211 ABC transporters family signature." misc_feature complement(2895302..2895325) /locus_tag="CMS_2749" /old_locus_tag="CMS2749" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2895751..2896668 /locus_tag="CMS_2750" /old_locus_tag="CMS2750" /db_xref="GeneID:6158289" CDS 2895751..2896668 /locus_tag="CMS_2750" /old_locus_tag="CMS2750" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711388.1" /db_xref="GI:170783054" /db_xref="GeneID:6158289" /translation="MSGTPPAHEPHGGHRRRREAAREKARLNRMKQRRRDVVGRYAIR GGIAAALVAVVVVVGLIVVQGARPAGPGPQNMASDGILIGKDLAASPTQALDPEQDPV PTESQAAGVAHIRVYVDYLCTACKEFQDTNGAQMEGWLQSGAATVEIHPVAILTSKSQ AYSLRAANAAACVADTAPDDFWAFNSALFAEQPAEQSTGLSDDRIVELAGQAGAGSSD VAKCISDQRFQSWVNAATDRVLDGDIPDSNVDKVVGAPIIVVGDRQYTGQPDDAKAFA AFVLQAAGQDATTTPTPTPSPSETPTTAP" misc_feature 2895871..2895939 /locus_tag="CMS_2750" /old_locus_tag="CMS2750" /note="1 probable transmembrane helix predicted for CMS2750 by TMHMM2.0 at aa 41-63" gene 2896710..2896782 /locus_tag="CMS_r035" /old_locus_tag="CMSr035" /db_xref="GeneID:6158290" tRNA 2896710..2896782 /locus_tag="CMS_r035" /old_locus_tag="CMSr035" /product="tRNA-Thr" /db_xref="GeneID:6158290" gene complement(2896797..2897408) /locus_tag="CMS_2751" /old_locus_tag="CMS2751" /db_xref="GeneID:6159065" CDS complement(2896797..2897408) /locus_tag="CMS_2751" /old_locus_tag="CMS2751" /codon_start=1 /transl_table=11 /product="putative nitroreductase" /protein_id="YP_001711389.1" /db_xref="GI:170783055" /db_xref="GeneID:6159065" /translation="MTDVPRHRAGGTADPSEPGTHARERPVLEALRGRRSRSSVGAAS PTHEELVPLVAATSRLADHGALRPWRIIEIRGGARDRLGAAMDEAAGDPGSGKHRKKT HRASLLVAVVVCRTPSRKVPEWEQEAVAAGVAHALTLLLEEQGWGVFWRTGSLTRSEP VRRMHGLRDGEDLLGWLYVGDAVADDKGPRPTVDGERMITVLE" misc_feature complement(2896866..2897318) /locus_tag="CMS_2751" /old_locus_tag="CMS2751" /inference="protein motif:HMMPfam:PF00881" /note="HMMPfam hit to PF00881, Nitroreductase, score 5.1e-06" misc_feature complement(2896992..2897024) /locus_tag="CMS_2751" /old_locus_tag="CMS2751" /note="PS00626 Regulator of chromosome condensation (RCC1) signature 2." gene complement(2897405..2897869) /locus_tag="CMS_2752" /old_locus_tag="CMS2752" /db_xref="GeneID:6158291" CDS complement(2897405..2897869) /locus_tag="CMS_2752" /old_locus_tag="CMS2752" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711390.1" /db_xref="GI:170783056" /db_xref="GeneID:6158291" /translation="MTMEARWDAAPRIDQRERTRTMAYEIEKTDDEWRQELSPEEYAV LRQQATERPWTGELLDEERTGVYGCKACGAELFTSDTKFDSHCGWPSFYAPKESDAVK LYTDTSLGMKRVEVVCARCGSHLGHVFDDAPQTPTGDRFCMNSVSMSFRTAE" misc_feature complement(2897411..2897782) /locus_tag="CMS_2752" /old_locus_tag="CMS2752" /inference="protein motif:HMMPfam:PF01641" /note="HMMPfam hit to PF01641, Protein of unknown function DUF25, score 4.6e-76" gene 2898044..2898373 /locus_tag="CMS_2753" /old_locus_tag="CMS2753" /db_xref="GeneID:6158292" CDS 2898044..2898373 /locus_tag="CMS_2753" /old_locus_tag="CMS2753" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711391.1" /db_xref="GI:170783057" /db_xref="GeneID:6158292" /translation="MDQRETSPATAPTTGPHPAVELDARDRAVLDFERDWTRHAGAKE EAIRHTFGLSATRYYQLLGSLLETRQALAYDPLLVGRLLRLRETRAAARAARALPTGL PHRPTAR" gene 2898407..2898979 /locus_tag="CMS_2754" /old_locus_tag="CMS2754" /db_xref="GeneID:6158293" CDS 2898407..2898979 /locus_tag="CMS_2754" /old_locus_tag="CMS2754" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711392.1" /db_xref="GI:170783058" /db_xref="GeneID:6158293" /translation="MLSHAPDRFDEVPGDLSRVGAHRAPRPRHHRLRAFAWAALATGL LVGLGVVGLFVIDDRVSFTDIIPSGGSSEEAAPTEEPTVAPTTVPGMVVTVLNGTRTS GLSARAATMLQSSGWAIGSRLNASSTDIATTTVYYYDAADEGAARGLVAQLGVGEVAQ SDQFRPAAGVPAAQASKLTAVLGADYAAKR" gene 2899216..2899434 /locus_tag="CMS_2755" /old_locus_tag="CMS2755" /db_xref="GeneID:6158294" CDS 2899216..2899434 /locus_tag="CMS_2755" /old_locus_tag="CMS2755" /codon_start=1 /transl_table=11 /product="putative cold shock protein" /protein_id="YP_001711393.1" /db_xref="GI:170783059" /db_xref="GeneID:6158294" /translation="MANGTVKWFNGEKGFGFITVDAVEGGPAQQDVFVHYSAIEMSGY KVLEEGQRVAFEIGQGSKGLQAENVTLA" misc_feature 2899216..2899431 /locus_tag="CMS_2755" /old_locus_tag="CMS2755" /inference="protein motif:HMMPfam:PF00313" /note="HMMPfam hit to PF00313, Cold-shock protein,DNA-binding, score 1.3e-33" gene 2899623..2901242 /gene="groEL" /locus_tag="CMS_2756" /old_locus_tag="CMS2756" /db_xref="GeneID:6158295" CDS 2899623..2901242 /gene="groEL" /locus_tag="CMS_2756" /old_locus_tag="CMS2756" /note="60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="YP_001711394.1" /db_xref="GI:170783060" /db_xref="GeneID:6158295" /translation="MAKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWG APTITNDGVSIAKEIELDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREG LRNVAAGADPISLKRGIEKAVAAVTEELKAAAKEIETKEEIAATASISAGDSTIGAII AEAIDKVGKEGVVTVEESNTFGTELELTEGMRFDKGYLSQYFVTDPERQEAVFEDAYI LIVNSKISNIKDLLPIVDKVIQSGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKA PGFGDRRKAQLQDIAILTGGQVIAEEVGLKLENVTLDLLGTARKVVITKDETTIVEGG GDATEIAARVQQIRNEIGNTDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKH RIEDAVRNAKAAVEEGIVAGGGVALIQAGKLAFEKLQLEGDEATGANIVRVAVDAPLK QIALNAGLEPGVVAERVRNLPSGHGLNAATGEYVDMLAAGINDPVKVTRSALLNAASI AGLFLTTEAVVADKPEKNPAPAGDPTGGMDF" misc_feature 2899686..2901191 /gene="groEL" /locus_tag="CMS_2756" /old_locus_tag="CMS2756" /inference="protein motif:HMMPfam:PF00118" /note="HMMPfam hit to PF00118, Chaperonin Cpn60/TCP-1,score 1.8e-193" misc_feature 2900829..2900864 /gene="groEL" /locus_tag="CMS_2756" /old_locus_tag="CMS2756" /note="PS00296 Chaperonins cpn60 signature." gene complement(2901383..2901673) /locus_tag="CMS_2757" /old_locus_tag="CMS2757" /db_xref="GeneID:6158736" CDS complement(2901383..2901673) /locus_tag="CMS_2757" /old_locus_tag="CMS2757" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711395.1" /db_xref="GI:170783061" /db_xref="GeneID:6158736" /translation="MTRYQVDSEAVLSATAAVQGSIGRIQAEVAGLHGQLAELQGSWS GSAATAFQGVVAEWKGTQQRVEEALASINQALSAAARQYAEVEEGNARMFAH" misc_feature complement(2901407..2901673) /locus_tag="CMS_2757" /old_locus_tag="CMS2757" /inference="protein motif:HMMPfam:PF06013" /note="HMMPfam hit to PF06013, Bacterial protein of unknown function DUF909, score 8e-14" gene complement(2901720..2903480) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /db_xref="GeneID:6158296" CDS complement(2901720..2903480) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /codon_start=1 /transl_table=11 /product="putative two-component system sensor kinase" /protein_id="YP_001711396.1" /db_xref="GI:170783062" /db_xref="GeneID:6158296" /translation="MRPVHDYVSDKWNNVSLRTKITSVTVLLLLLGLLVSGAGTMYLL RQQMVSQLDAQLRVTITQLPKVLNTDATMPDTFTQDDVATADPAWFVVLLDAQGDVLA DNWTGDSAEHPRVFGLDLARASQINNEIVVFSDNSGKKAWHGIVRVSQNASPDAMEYS TLVVARPLEQVDDLVATYIVIFASFGLAVVVLGAAVTRMLVTSTFGPLREVERTAAAI AGGDFSQRLGGATPNTEVGRLNRSLNMMLSRIDRAFADRAKTIDQMRRFVGDASHELR TPLVSVRGYAELYRMGALQTPEDVSQAMERIEKEAIRMGGLVEDLLELARLDETKPLQ LAPVDLYPIARDAALDAMASSQTRTVTALPPVLVNPVGPMLDADGLESTQDLSPEAPR GSGTTAGNDATGPIAFAGATLSRFRARRSRRPGETSTDALSPARPGDDDARVPAEGFA MVQAEENKIRQVVTNLIGNAVRFTPAGSPIELATVVDEAAREARIEVRDHGDGVPPQI REKIFQRFWRADTSRTRETGGSGLGLAIVSAIVAAHRGRVDVVETEGGGATFRVILPL LPSAENPATSTPSVPPAPAS" sig_peptide complement(2901720..2901830) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /note="Signal peptide predicted for CMS2758 by SignalP 2.0 HMM (Signal peptide probability 0.776) with cleavage site probability 0.574 between residues 37 and 38" misc_feature complement(2901780..2902121) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /inference="protein motif:HMMPfam:PF02518" /note="HMMPfam hit to PF02518, ATP-binding region,ATPase-like, score 9.2e-39" misc_feature complement(2902491..2902694) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /inference="protein motif:HMMPfam:PF00512" /note="HMMPfam hit to PF00512, Histidine kinase A,N-terminal, score 1.6e-19" misc_feature complement(2902725..2902937) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /inference="protein motif:HMMPfam:PF00672" /note="HMMPfam hit to PF00672, Histidine kinase, HAMP region, score 3e-11" misc_feature complement(order(2902893..2902961,2903349..2903417)) /locus_tag="CMS_2758" /old_locus_tag="CMS2758" /note="2 probable transmembrane helices predicted for CMS2758 by TMHMM2.0 at aa 22-44 and 174-196" gene complement(2903604..2904296) /locus_tag="CMS_2759" /old_locus_tag="CMS2759" /db_xref="GeneID:6158297" CDS complement(2903604..2904296) /locus_tag="CMS_2759" /old_locus_tag="CMS2759" /codon_start=1 /transl_table=11 /product="putative two-component system response regulator" /protein_id="YP_001711397.1" /db_xref="GI:170783063" /db_xref="GeneID:6158297" /translation="MSDGPKILIVDDEPNIRDLLTTSLRFAGFAVRAVGNGAQAISAV LEEEPDLIILDVMLPDMNGFGVTKRLRAAGYTAPILFLTAKDDTEDKITGLTVGGDDY VTKPFSLDEIVARIKAILRRTMHADEDAIIRAGELTMDQDTHEVLVGEEPIELSPTEF KLLRYLMLNPNRVLSKAQILDHVWEYDFNGDAGIVESYISYLRRKLDQHSSEPVIQTK RGFGYMLKAAKS" misc_feature complement(2903622..2903849) /locus_tag="CMS_2759" /old_locus_tag="CMS2759" /inference="protein motif:HMMPfam:PF00486" /note="HMMPfam hit to PF00486, Transcriptional regulatory protein, C-terminal, score 6.3e-27" misc_feature complement(2903925..2904284) /locus_tag="CMS_2759" /old_locus_tag="CMS2759" /inference="protein motif:HMMPfam:PF00072" /note="HMMPfam hit to PF00072, Response regulator receiver, score 5.8e-43" gene complement(2904374..2906014) /locus_tag="CMS_2760" /old_locus_tag="CMS2760" /db_xref="GeneID:6158298" CDS complement(2904374..2906014) /locus_tag="CMS_2760" /old_locus_tag="CMS2760" /codon_start=1 /transl_table=11 /product="putative DNA repair helicase" /protein_id="YP_001711398.1" /db_xref="GI:170783064" /db_xref="GeneID:6158298" /translation="MPDGPLIVQSDRTVLLEVAHADAEDARHDLAVFAELERAPEHIH TYRITRLGLWNARAAGHTAEDMLATLERYSRFPVPQSVTVDVTDTVGRYGRLVIGRDA DGELQISSTESAVLSEVASSRRIAPLLTERVDATTYRVQAWARGQLKQELVKIGWPAE DLAGYTPGTPHDMALVEDGWTLRGYQNDAVDHFLDGGSGVVVLPCGAGKTLVGAAAMA RAKTTTLILVTNTVSARQWRSELLKRTTLTEDEIGEYSGQSREVKPVTIATYQILTAK RKGEYAHLALLDALDWGLVVYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGREG DVFSLIGPKRFDAPWKEIEAQGFISPAECFEVRIDLPDDERLVYAAAADDERYRLAAT APAKLDVTRALVERHRGESILVIGQYLEQIDELSEALGAPKLTGATPVAERERLYQAF RDGTERVLVVSKVANFSVDLPDATVAIQVSGSFGSRQEEAQRLGRLLRPEASGLSASF YTLVSRDTVDQDFAQNRQRFLAEQGYSYTILDAAGIAA" misc_feature complement(2904515..2904733) /locus_tag="CMS_2760" /old_locus_tag="CMS2760" /inference="protein motif:HMMPfam:PF00271" /note="HMMPfam hit to PF00271, Helicase, C-terminal, score 1.6e-11" misc_feature complement(2905013..2905471) /locus_tag="CMS_2760" /old_locus_tag="CMS2760" /inference="protein motif:HMMPfam:PF00270" /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,N-terminal, score 5.5e-10" misc_feature complement(2905031..2905477) /locus_tag="CMS_2760" /old_locus_tag="CMS2760" /inference="protein motif:HMMPfam:PF04851" /note="HMMPfam hit to PF04851, Type III restriction enzyme, res subunit, score 4.2e-12" gene complement(2906035..2907906) /locus_tag="CMS_2761" /old_locus_tag="CMS2761" /db_xref="GeneID:6158299" CDS complement(2906035..2907906) /locus_tag="CMS_2761" /old_locus_tag="CMS2761" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711399.1" /db_xref="GI:170783065" /db_xref="GeneID:6158299" /translation="MLAARLRALGDASLAALVRDRGIDAARIADLFDLADALLSPDAV AGALEQLDRTALAVLAVAAEEGAPTRPVPLDAIRDSLARRSGEDPLDPAGLTGAARRA ADTLLASLGDAGLTTHQEVAVALAAWPAAGLPGTDELARLTPPAPLAAVPRVDPEEVD AHAGESAFRSVVAVAALIDELTREPARELSRGGMSLPDARRLAGALGVDLDDVPVYLS LAGRAALVARSGRTWSAAAASAAWSGRPTVERWESLSAAWLDALAPATRVILAERTDA SWGAGLVDSVLWRFPGGSAWIGERITAFTRDAGLLGITTGDVPSSAGRALLTTGSAAA AAALAPHLPAEVDRVYLQHDLTVVSPGPLDAAVESRLLSVADAEGRGLAATYRISAAS VTRALASGATVEGIRSLLAEVALTGIPQPLDYLIDEAAARFGRLRVRPASPSDAAPDA RTAVVSEDGPLLATLLVDRDLAPLRLVRAGDSVLTSAASPDAVERALAAARLAPVRED AEGRRLAPAPPTTPTPHADAHPEPDAADALVSRVRAADGPDDGAAWTTRQLEVAIRAK AALHVRVRMPDGREVDHVLEPSSVAGGRLRARDRVADVERTLPLSSIVAVSPGPATA" gene complement(2907932..2908201) /locus_tag="CMS_2762" /old_locus_tag="CMS2762" /db_xref="GeneID:6158300" CDS complement(2907932..2908201) /locus_tag="CMS_2762" /old_locus_tag="CMS2762" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711400.1" /db_xref="GI:170783066" /db_xref="GeneID:6158300" /translation="MASETAPSEGRVERILAYMLAGILLIAVLSILAILLAPLIAVDA SQYSTPMWQVILLLPAVGIPIAALLFIAILIISVRRRRRMDGTSR" sig_peptide complement(2907932..2908063) /locus_tag="CMS_2762" /old_locus_tag="CMS2762" /note="Signal peptide predicted for CMS2762 by SignalP 2.0 HMM (Signal peptide probability 0.936) with cleavage site probability 0.601 between residues 44 and 45" misc_feature complement(order(2907980..2908048,2908076..2908144)) /locus_tag="CMS_2762" /old_locus_tag="CMS2762" /note="2 probable transmembrane helices predicted for CMS2762 by TMHMM2.0 at aa 20-42 and 52-74" gene 2908314..2908697 /locus_tag="CMS_2763" /old_locus_tag="CMS2763" /db_xref="GeneID:6158301" CDS 2908314..2908697 /locus_tag="CMS_2763" /old_locus_tag="CMS2763" /codon_start=1 /transl_table=11 /product="putative cold shock protein" /protein_id="YP_001711401.1" /db_xref="GI:170783067" /db_xref="GeneID:6158301" /translation="MPTGKVKFYDEDKGFGFISSDDGQEVFLHASALPSGVAGVKAGT RLEFGIADGKRGAQALSARILDAPPSLARMSRKPADDMAVIVEDLVKVLDGIGTGLKR GRYPDEAHGRKIAALLRRVAEELDA" misc_feature 2908332..2908508 /locus_tag="CMS_2763" /old_locus_tag="CMS2763" /inference="protein motif:HMMPfam:PF00313" /note="HMMPfam hit to PF00313, Cold-shock protein,DNA-binding, score 2.8e-08" misc_feature 2908356..2908412 /locus_tag="CMS_2763" /old_locus_tag="CMS2763" /note="PS00352 'Cold-shock' DNA-binding domain signature." gene 2908690..2909382 /locus_tag="CMS_2764" /old_locus_tag="CMS2764" /db_xref="GeneID:6158302" CDS 2908690..2909382 /locus_tag="CMS_2764" /old_locus_tag="CMS2764" /note="Hydrophilic Asp-repeat in C-terminus" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711402.1" /db_xref="GI:170783068" /db_xref="GeneID:6158302" /translation="MPEPREDEVTMTDETTADAAATDDDVTAADVTDVTAADVTVADA TGEVTAPATEVAAPAEPAVPDAELLAAVDLARAALLEITPADTVGEPAGSIVEGDRVL SLLFANTMPGYPGWFWTVTLARVDDAAPTVLEAELMPGEGALLSPEWLPWSDRLAGVE AEQEAERLAAEGAEDDDDDPAEDAEDTDDVLDGVDFEAPASDDHDDDDDDDDDDDDDD DDDDTSFDGADR" gene complement(2909452..2910570) /gene="serC" /locus_tag="CMS_2765" /old_locus_tag="CMS2765" /db_xref="GeneID:6158303" CDS complement(2909452..2910570) /gene="serC" /locus_tag="CMS_2765" /old_locus_tag="CMS2765" /EC_number="2.6.1.52" /note="catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /protein_id="YP_001711403.1" /db_xref="GI:170783069" /db_xref="GeneID:6158303" /translation="MPATTIPTELLPLDGRFGCGPSKVRQAQLDHLALAGAQILGTSH RQAPVKDMVGRVRAGLSRLFRLPDGYEVVLGNGGSTAFWDAAAFSLIERRSQNLVFGE FGGKFAKAATAPFLEAPDVIRAEPGSRASANPVEGVDVYAWPHNETSTGVMAPVTRVH GDEGALTVVDATSAAGGIDFDAAQADVYYFAPQKNLASDGGVWLALFSPAALERVERI AASGRWIPEFLSLKNAVDNSRLDQTLNTPALATLLMLEDQLDWIERAGGLAWADARTR ESSSVLYDWAERAEYARPFVTDPAHRSQVVVTMDFDDSIDAAGVAKTLRANGIVDTEP YRKLGRNQLRVATFTAIEPDDVRALVRCIEFVVEQGAG" gene 2910677..2911375 /locus_tag="CMS_2766" /old_locus_tag="CMS2766" /db_xref="GeneID:6158988" CDS 2910677..2911375 /locus_tag="CMS_2766" /old_locus_tag="CMS2766" /codon_start=1 /transl_table=11 /product="putative metal dependent regulatory protein" /protein_id="YP_001711404.1" /db_xref="GI:170783070" /db_xref="GeneID:6158988" /translation="MTDLVDTTEMYLRTILDLEEEAIVPLRARISERLGHSGPTVSQT VARMERDGLVIVSGDRHLELTPEGRSKAVHVMRKHRLAERLLSDVIGLEWEFVHDEAC RWEHVMSEQVERKILDLLGHPTESPYGNPIPGLDELGDSPAVAFMAGVVSIVEASLGT TEDAPARGVIRRLGEPVQFDPELLSQLKQAGVLPGATGSFSREGAYVLVRVDGAGPGL ELPLEVAGHIFIER" misc_feature 2910683..2910865 /locus_tag="CMS_2766" /old_locus_tag="CMS2766" /inference="protein motif:HMMPfam:PF01325" /note="HMMPfam hit to PF01325, Iron dependent repressor,score 4.4e-26" misc_feature 2910869..2911081 /locus_tag="CMS_2766" /old_locus_tag="CMS2766" /inference="protein motif:HMMPfam:PF02742" /note="HMMPfam hit to PF02742, Iron dependent repressor,score 2.6e-32" misc_feature 2911127..2911372 /locus_tag="CMS_2766" /old_locus_tag="CMS2766" /inference="protein motif:HMMPfam:PF04023" /note="HMMPfam hit to PF04023, FeoA, score 0.0018" gene 2911699..2912646 /locus_tag="CMS_2767" /old_locus_tag="CMS2767" /db_xref="GeneID:6158304" CDS 2911699..2912646 /locus_tag="CMS_2767" /old_locus_tag="CMS2767" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711405.1" /db_xref="GI:170783071" /db_xref="GeneID:6158304" /translation="MSGVETQEVDNLAHGDISGSVGNPSDPTRPPAPGMDRLPTRREL RAAETAKAVRPRRDSATRTLQAPAPRLSPAPTPAGRSRRTKAANAVVMTFVTGLVGVM AIPAYAAGTSLEHTSSAEGTSLQDYTAANAQVVTAHNASSAPVEEEGFTATSVADLNA QKAAAARAALAEQRRTQLASSATSYTGASANQLAQNPIYQGTSASGVAAVARQYIDVP YVFGGETPAGFDCSGLVKYVFAQFGLNLPHSVRAQHNAGTVVSREDARPGDIVVWNDF SHDGIYTGNGIFIDAPKPGDQVKERPIWSTNVHFVRLLG" misc_feature 2911957..2912025 /locus_tag="CMS_2767" /old_locus_tag="CMS2767" /note="1 probable transmembrane helix predicted for CMS2767 by TMHMM2.0 at aa 94-116" misc_feature 2912344..2912634 /locus_tag="CMS_2767" /old_locus_tag="CMS2767" /inference="protein motif:HMMPfam:PF00877" /note="HMMPfam hit to PF00877, NLP/P60, score 3.4e-27" gene 2912821..2913504 /locus_tag="CMS_2768" /old_locus_tag="CMS2768" /db_xref="GeneID:6158305" CDS 2912821..2913504 /locus_tag="CMS_2768" /old_locus_tag="CMS2768" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711406.1" /db_xref="GI:170783072" /db_xref="GeneID:6158305" /translation="MRTCATAIGTIPGWASTWSTRAVTRSPRRHRRALGGAFACSAGA GRLIRIPGSRPGRSERDVVRTLVLNAGFEPLAVVSFKRALVLVLSGKATMLAQDEEHP ILGNGGAWGRPSVILLTRYVRIPHARRVPVSRRGVLRRDGGRCAYCARNATTIDHVLP RSRGGKDTWENLVACCLSCNNRKSDRTPEEMGWTLRTPPRAPQGSGWVVSGMERPAPG WDEFLAPAA" misc_feature 2913247..2913381 /locus_tag="CMS_2768" /old_locus_tag="CMS2768" /inference="protein motif:HMMPfam:PF01844" /note="HMMPfam hit to PF01844, HNH endonuclease, score 2e-13" gene 2913538..2915634 /locus_tag="CMS_2769" /old_locus_tag="CMS2769" /db_xref="GeneID:6158306" CDS 2913538..2915634 /locus_tag="CMS_2769" /old_locus_tag="CMS2769" /codon_start=1 /transl_table=11 /product="putative endopeptidase" /protein_id="YP_001711407.1" /db_xref="GI:170783073" /db_xref="GeneID:6158306" /translation="MTADARASDAPDDPFLWLEEIHGDRALAWVRAENERTLGRSPEA SRAGLTTELLEVLESDERIPYVTRHGEHLYNLWRDAEHVQGLWRRTTLDEYQAPAPEW EVLLDLDALGEAEGIPWQFSRAQLLSPARDRALVSLSPDGGDAVAVRELDLTTGRFVE GGFEVPVAKTMVSWIDRDTVFVGTDFGPGSLTESSYARTARRWSRGQALADAPEVHAV APTDMLVHVTHDPTPGFERDVVREVPDFFTSRTLLLTAAGTVSIEVPEDVDVDLHREW LVLRPRTDMAMGGVVHPAGSLLAARLDDFLAGSRELAVLFAPTSSRSLEDWAWTAGHL VLTLLEDVASRIRVLTPPTADGSGGWREEDVRVGTPFASVSVVATDRDTDEYWLAVTG FLTPPTLLHGVVGEGAPRPVKEQPATFDAEGLEVQQHFAVSDDGTRLPYFQVGPRDLP LDGSAATLLSGYGGFENSLLPSYSGVRGRGWLARGGVYVLANIRGGGEYGPAWHRAAL RKDRHRAYEDFAAVARDLVTRGVTVPARLGCEGRSNGGLLVGNMLTTYPELFGAVVCG VPLLDMRRYTRLSAGASWIAEYGDPDVPSDWDFIRTFSPYHNVRAGVEYPPTLVYAAT SDDRVGPVQARKMVALLHETGVEDAWYYENTAGGHGGSADNPATARLQSLIHAFLWER LGGVAAGGSVDDGREA" misc_feature 2913541..2914782 /locus_tag="CMS_2769" /old_locus_tag="CMS2769" /inference="protein motif:HMMPfam:PF02897" /note="HMMPfam hit to PF02897, Peptidase S9A, prolyl oligopeptidase, N-terminal beta-propeller, score 2.7e-24" misc_feature 2914948..2915595 /locus_tag="CMS_2769" /old_locus_tag="CMS2769" /inference="protein motif:HMMPfam:PF00326" /note="HMMPfam hit to PF00326, Peptidase S9, prolyl oligopeptidase active site region, score 3.8e-51" gene complement(2915654..2916418) /locus_tag="CMS_2770" /old_locus_tag="CMS2770" /db_xref="GeneID:6158307" CDS complement(2915654..2916418) /locus_tag="CMS_2770" /old_locus_tag="CMS2770" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711408.1" /db_xref="GI:170783074" /db_xref="GeneID:6158307" /translation="MIRVDVLGGFRVAGLGADAASASTGPDPAGAALSDGTRRLIAAL AIRARPADRSTLASQLWPDALDGRAASSLRSAIARLGDGGREIVGSAPGGLVLHDAVA VDLRTARATAARLLEPRQEEPDDADISPAAVALFSADLLPDWFDAWLEPAAEEWRHLR VNALEAQSQALLARSRLHEAAAAARRAIDVDPLRETAQRCLIAVHVAAGNRSDAIRAY EIYRTRLDREVGLEPTAMLTDLVSGLRARPAARRDG" sig_peptide complement(2915654..2915746) /locus_tag="CMS_2770" /old_locus_tag="CMS2770" /note="Signal peptide predicted for CMS2770 by SignalP 2.0 HMM (Signal peptide probability 0.934) with cleavage site probability 0.615 between residues 31 and 32" misc_feature complement(2915684..2916112) /locus_tag="CMS_2770" /old_locus_tag="CMS2770" /inference="protein motif:HMMPfam:PF03704" /note="HMMPfam hit to PF03704, Bacterial transcriptional activator domain, score 9.7e-12" gene complement(2916667..2917918) /locus_tag="CMS_2771" /old_locus_tag="CMS2771" /pseudo /db_xref="GeneID:6158308" misc_feature complement(2916691..2916750) /locus_tag="CMS_2771" /old_locus_tag="CMS2771" /note="1 probable transmembrane helix predicted for CMS2771 by TMHMM2.0 at aa 279-298" /pseudo misc_feature complement(2916883..2916912) /locus_tag="CMS_2771" /old_locus_tag="CMS2771" /note="PS00178 Aminoacyl-transfer RNA synthetases class-I signature." /pseudo gene complement(2918139..2918489) /locus_tag="CMS_2772" /old_locus_tag="CMS2772" /db_xref="GeneID:6158309" CDS complement(2918139..2918489) /locus_tag="CMS_2772" /old_locus_tag="CMS2772" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711409.1" /db_xref="GI:170783075" /db_xref="GeneID:6158309" /translation="MARKVVTTLVDDIDGVVIEEGKGETVPFALDGVNYEIDLSDANA AKLREALDTYVDRARRVGRASTGRSTGTRRSSSSAPKEDLGAAREWLREHGHKVSERG RISADLLEEYRANK" gene complement(2918855..2919637) /locus_tag="CMS_2773" /old_locus_tag="CMS2773" /db_xref="GeneID:6158310" CDS complement(2918855..2919637) /locus_tag="CMS_2773" /old_locus_tag="CMS2773" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711410.1" /db_xref="GI:170783076" /db_xref="GeneID:6158310" /translation="MTDTTRMIPWDGTLDERAAQALEAPGGLVVAATKVGYILMTTDG VGLERKFDAKQRNRDKPGVVLCTSIEQLEQLAVLNDEILAFYQEHWDADVLLGCILPW REDAKHLIPDEVAGELAMDRRGTSCFVIRFGRPAEQLAERLWASGRLSFASSANPSGK GNRGRVEGIGERIEQQADVIVAADDYVASIQPGLDETSRHEQGVMVSMVDASGALIPE QRGERSVTPNPTLIRRGLAVDVIMSALARSFPSWDYRHGEYY" gene 2919848..2921455 /locus_tag="CMS_2774" /old_locus_tag="CMS2774" /db_xref="GeneID:6158311" CDS 2919848..2921455 /locus_tag="CMS_2774" /old_locus_tag="CMS2774" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711411.1" /db_xref="GI:170783077" /db_xref="GeneID:6158311" /translation="MSAAAGWYDDQDPRYVRWWDGAQWTEHVQPKPEVTPTEPEPVPV APAAPPVDRLSKREARERAAAAEAHIAQLEDLVRRHGMREYAEVDDYRQRAEAEAEAA RRTGAEAASALVAAAREERDRMLAEAGAERRRAEADAGAVRDRAEADARAARLRAEAE LHAVDEAVHERIETRRALDAELAAARAELVDVTTTAELQGVGLFDYDHPAESSAELAS RLEALRYTIKNAVRDKRAVTATSGFTFNGSEAQGRRFVSDMSKVLLRAYNAEAENAVK ATKAGNLHVAQNRLTKAAEQIARSGTMIDLRIEDGYHELRLEELQLASAHLRVLQAEK EMERERRAELREQAKASAELQAEHDRLDKERAHYAATLAALENKGDLEGAARMRDRIE DVDRALVEVDYRAANVRAGYVYVISNVGAFGERMVKIGMTRRLEPMDRVVELGDASVP FRFDVHALFFADDAVGVEAMLHRTFADHRVNRINLRREFFYVTPDEVLDALKAHAVEI VEFALHPAAEEYRASRALDGAEAVPAS" gene complement(2921465..2922652) /locus_tag="CMS_2775" /old_locus_tag="CMS2775" /db_xref="GeneID:6158312" CDS complement(2921465..2922652) /locus_tag="CMS_2775" /old_locus_tag="CMS2775" /codon_start=1 /transl_table=11 /product="putative hydantoin utilization protein" /protein_id="YP_001711412.1" /db_xref="GI:170783078" /db_xref="GeneID:6158312" /translation="MRIGIDVGGTNTDAVLMDGDRVVVGIKSSTTQDVTSGIVGALAE LDRQHPFDPAGIDAVMIGTTHFINALVEARRLAPTAAVRLALPATASLPPFVDWPEEL VAAVRGTGYLAHGGHEFDGRVIAPLDHDELKRHAADIAARRLRSVAISSVFAPVNSEF EVEAAAVLAAELGPDVAISLSHEIGRIGLLERENATIINAPLRELADQIVGGLERAVR GHGITAPLYLSQNDGTLMGVDFARRYPVATFASGPTNSMRGAALLSGLGTCAVVDIGG TTSDVGVLAGGFPREATAEISVAGVRTNFRMPDVLSIGIGGGSLVRGDGDLVGPDSVG YELGRRALVFGGDTLTTTDIAVAAVAERIQRVQRILQVDLQDAKTRLALHLACRTVLA AGA" misc_feature complement(2921468..2922079) /locus_tag="CMS_2775" /old_locus_tag="CMS2775" /inference="protein motif:HMMPfam:PF01968" /note="HMMPfam hit to PF01968, Hydantoinase/oxoprolinase,score 3.6e-34" misc_feature complement(2922137..2922649) /locus_tag="CMS_2775" /old_locus_tag="CMS2775" /inference="protein motif:HMMPfam:PF05378" /note="HMMPfam hit to PF05378, Hydantoinaseoxoprolinase,N-terminal, score 1.1e-51" gene complement(2922649..2924004) /locus_tag="CMS_2776" /old_locus_tag="CMS2776" /db_xref="GeneID:6158313" CDS complement(2922649..2924004) /locus_tag="CMS_2776" /old_locus_tag="CMS2776" /codon_start=1 /transl_table=11 /product="putative purine permease" /protein_id="YP_001711413.1" /db_xref="GI:170783079" /db_xref="GeneID:6158313" /translation="MASTAPDDYALARVPQEARYHWFPIATQRVGQLSALSAFVVAAT LGFSMSFWDAFWAITIGAVILEVVCIFTGLIGMREGLNTSVLSRWTGFGHNGSALIGL AVGISLIGWFGIQSGVSASGLNSIMPWLPVWAWSLAFGLIITAVVMLGFHGMQWVANV AVPLFLLLVGWAVVIELQKHDISELVTQSAPGPQMSIIAGASIVAGGFIVGALISPDQ TRYNRSAADVVKQTIVSITVGEYLTGLSGVLLAHAVRTADVSAIILSSVGWVGVLVIL LGTIKINDWNLYSSGLGIVNFIDTVFGRRVNRALVTVVVGVLAAAGILGQFTAFLTLL GVAFPPIVGIMIAEYFVVKNWRPALDASRENGALPASAPRWVPVSLAIWVVSALVGYF ATFGLGSLNAVITAFVLYAVLGKAGLIRGVGEVCTEAVAQPAPGVAAPDAATAGKVAT R" misc_feature complement(2922745..2923968) /locus_tag="CMS_2776" /old_locus_tag="CMS2776" /inference="protein motif:HMMPfam:PF02133" /note="HMMPfam hit to PF02133, Permease for cytosine/purines, uracil, thiamine, allantoin, score 1.1e-07" misc_feature complement(order(2922766..2922834,2922844..2922912, 2922949..2923017,2923030..2923089,2923171..2923230, 2923243..2923311,2923369..2923437,2923480..2923539, 2923552..2923620,2923663..2923731,2923777..2923845)) /locus_tag="CMS_2776" /old_locus_tag="CMS2776" /note="11 probable transmembrane helices predicted for CMS2776 by TMHMM2.0 at aa 54-76, 92-114, 129-151, 156-175,190-212, 232-254, 259-278, 306-325, 330-352, 365-387 and 391-413" misc_feature 2924018..2935981 /note="submitted with no further information" gene 2924477..2924935 /locus_tag="CMS_2777" /old_locus_tag="CMS2777" /db_xref="GeneID:6158314" CDS 2924477..2924935 /locus_tag="CMS_2777" /old_locus_tag="CMS2777" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711414.1" /db_xref="GI:170783080" /db_xref="GeneID:6158314" /translation="MLSLLESLPEDLKQADPRTTPNYADRLDAEIKARSGGAYEGSSV ASDSPVLSTALFARDSGGPRASTTGPRIELAVNWVACATDIVGLIVQYGVPVGKVIGW IKDARAIYGSVRAIAAAIRRGDFGVTEGEDAAQVLEGLLGIDGVIADCFT" gene 2924932..2925558 /locus_tag="CMS_2778" /old_locus_tag="CMS2778" /db_xref="GeneID:6158315" CDS 2924932..2925558 /locus_tag="CMS_2778" /old_locus_tag="CMS2778" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711415.1" /db_xref="GI:170783081" /db_xref="GeneID:6158315" /translation="MNLEGSQMGNERARNSETWEPPGFGAAMSGHLLFGVLKAPGVLL ALWLLTTFFFDADVSFGGMVAGVAAATIAAGLVEVLVEDRFSRARRLSSPGGWDFALV PALAALPPIVLLGWSVTGALAGGLALAGAWALVEAVEIAWLRPWEPGMTQAEHDAKWV ELQEMTKETFADDVEEIRRRAGERSMQRYRDAIERKRRQAGGDEPGGC" misc_feature order(2925025..2925093,2925106..2925174,2925211..2925279, 2925292..2925360) /locus_tag="CMS_2778" /old_locus_tag="CMS2778" /note="4 probable transmembrane helices predicted for CMS2778 by TMHMM2.0 at aa 35-57, 62-84, 97-119 and 124-146" gene 2926049..2926411 /locus_tag="CMS_2779" /old_locus_tag="CMS2779" /pseudo /db_xref="GeneID:6158316" gene 2926461..2926637 /locus_tag="CMS_2780" /old_locus_tag="CMS2780" /db_xref="GeneID:6158317" CDS 2926461..2926637 /locus_tag="CMS_2780" /old_locus_tag="CMS2780" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711416.1" /db_xref="GI:170783082" /db_xref="GeneID:6158317" /translation="MTQDEFDRKYVELKNMTRETFAPDVEEIRRRAGERTMQKYRDAI ERKRREAERDGDPR" gene complement(2926662..2927282) /locus_tag="CMS_2781" /old_locus_tag="CMS2781" /pseudo /db_xref="GeneID:6158318" gene complement(2927465..2929243) /locus_tag="CMS_2782" /old_locus_tag="CMS2782" /db_xref="GeneID:6158319" CDS complement(2927465..2929243) /locus_tag="CMS_2782" /old_locus_tag="CMS2782" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711417.1" /db_xref="GI:170783083" /db_xref="GeneID:6158319" /translation="MTHFDVRRVALSGDAVARWGAEHPRNSNWPVVYVLDGPPSGQRA RGRVRDDLYVGESLRAAARLAQHLKSDARGHLATARVIVGENFNKSVCLDFESRLINL FSGDGAYTVLNRNIGITNADYYDRVTYTAEFERVFEKLRSEGLFQRSIAEIENDDLFK LSPFKALSPDQEVALEQVLESLVTDRQAGKESTTVIQGEPGTGKTVVGIYLLKLIADI GRLPVDDVLDSDSLFADFFLGENRDALQGMRTGFVIPQQSLRESVKKVFTRTPGLQGV EVLTPFQVGESAGRFDLLIVDEAHRLNRRANQASGPLNRKFEDITVALFGEDDKQRTQ LDWIRAKSIHQILMIDPAQSVRPADLGASTIDGVIAEARRDRRWQPLMSQMRVRAGTD YIGYIRRVLGATPSPRPEKPLTADALGDYELRMFDDVGDMHAAIRDRDREHGLARMVA GFAWEWVSRKDPHAFDIEIGAYRARWNSTQRDWIASANALEEVGSIHTVQGYDLNYAG VIIGPDLRYDPEAGRLFMDRDSYFDKKGQENNPTLGITFSDDDLRLLISNVYAVLMTR GIRGTFVHVIDPALCEHMQRLLPRGS" misc_feature complement(2928629..2928652) /locus_tag="CMS_2782" /old_locus_tag="CMS2782" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2929230..2929574) /locus_tag="CMS_2783" /old_locus_tag="CMS2783" /db_xref="GeneID:6158320" CDS complement(2929230..2929574) /locus_tag="CMS_2783" /old_locus_tag="CMS2783" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711418.1" /db_xref="GI:170783084" /db_xref="GeneID:6158320" /translation="MADCYRDRMASRDVREELAAFVAERDWAQFHTPENLAKSIAIEA GELLECYQWDADGDPEQVKAELADVLTYCLLLAERLGLDPDEIVQDKLAVTQAKYPVD RARGRSTRYDAL" gene 2929659..2930771 /locus_tag="CMS_2784" /old_locus_tag="CMS2784" /db_xref="GeneID:6158321" CDS 2929659..2930771 /locus_tag="CMS_2784" /old_locus_tag="CMS2784" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711419.1" /db_xref="GI:170783085" /db_xref="GeneID:6158321" /translation="MEFAERLAALALKVRNQREAIQTEEATKNAFIMPFISTILGYDV FNPLEVVPEFTADLGLKKGEKIDYAIMRDGEVQILIECKKSTEPLKIEHASQLFRYFA VTNARIAVLTNGEVYHFYTDLDAPNRMDEKPFLVLDLADIDETLLPELMKLTKDVFDL DSIISAAGELKYVGALKRAIAAEFREPTPEWVKLLTRRVYEGSFTEKVREQFTTLVGK ASKQYLNEQVNDRLKTALGAPAFPSAPTAPSADAITSEEVVEADLDRDTEIETTLEEL EGYQIVKAITCSEVKPQRVVHRDAKSYLAILLDDNNRKPIARLHFNGKKQKYLGLFDA HKVETRHPIGSLDEIYAHADTIREAIRVHAGDAVVA" misc_feature 2929719..2930042 /locus_tag="CMS_2784" /old_locus_tag="CMS2784" /inference="protein motif:HMMPfam:PF04313" /note="HMMPfam hit to PF04313, Protein of unknown function DUF450, score 2.8e-24" gene complement(2931387..2933414) /locus_tag="CMS_2785" /old_locus_tag="CMS2785" /db_xref="GeneID:6158322" CDS complement(2931387..2933414) /locus_tag="CMS_2785" /old_locus_tag="CMS2785" /codon_start=1 /transl_table=11 /product="putative conjugal trasnfer protein" /protein_id="YP_001711420.1" /db_xref="GI:170783086" /db_xref="GeneID:6158322" /translation="MVMPYSEEVVSGMALRDCAGHLGPRPAEFGVHGVDGTSIGFDDA MAGRHVLYLGGIGTGKTVGISALVASVRASMTADDVMVVFDTKGDYHETFHRPGDAVI AATLADEFAGQVSWNLFEEFRALPPGRLPEDEIFEMCSGLFSRLIADAGDNAYFANAA RDVFTALVTAMYRESEERSNCDIRMIVGGMGTSEMHALLDRPENADLRGARHYIAKEG SNSTMATMAFMQQVIQESFRSSFGRPGDFSIRAFLRAKGARALFLEYDIASGSTLAPV FTTMLDVAMKEAMSRRRAGGRVFFVLDEFALLPELTHLSDGVNFGRSLGLRFIVGTQN VKQVQEMYGPEMAASVLSAFGSVFAFRLYDGDSRRFVGDRFGANRKLTRFDASVRGSG LREEVITGAVVEDWDLSSLGVGTCIAAIPDGPPVSGSGSRRRRRRRRPRRGRTAGQSS GEPHRAVGSIASRGARLSMRDASEQAHDREGGPMHVVPLGYIGEFEGKPNLALLDPLT SKTRHHTLAPETAQLLRSIDPTLSDQDLDEQERRLLVGYAKLGIVALIGDDAPLLALD VIPVPRVDIILDEVLDDGYRFSSGSDEPFELTEYGARFLTKADGRRTLGEIAEATRDE ALADEADRAAIEEGVARTGQSFERFLMDEAYRLIAALQGRVAVTFEATERT" misc_feature complement(2932023..2933384) /locus_tag="CMS_2785" /old_locus_tag="CMS2785" /inference="protein motif:HMMPfam:PF02534" /note="HMMPfam hit to PF02534, TRAG protein, score 0.00064" misc_feature complement(2933232..2933255) /locus_tag="CMS_2785" /old_locus_tag="CMS2785" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2933458..2934051) /locus_tag="CMS_2786" /old_locus_tag="CMS2786" /db_xref="GeneID:6158323" CDS complement(2933458..2934051) /locus_tag="CMS_2786" /old_locus_tag="CMS2786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711421.1" /db_xref="GI:170783087" /db_xref="GeneID:6158323" /translation="MNDMRVVQLGHIAEFDGRHNMAVQDPLTRKAASYDLTPEALELL LSLDPTETGRVFTPEERRLLQICAGLRMVALVEDGAPLSELPIIPAPRYDVILDAILE DGYRFTSEVDEPFELSEYGARLMSRVDGRTTLGEIALAVKQEALADEEDRAAIRVGEV ELQQTFDEYIEDEVYRFIAALRGREAITFEATAGERA" gene complement(2934089..2934760) /locus_tag="CMS_2787" /old_locus_tag="CMS2787" /db_xref="GeneID:6158324" CDS complement(2934089..2934760) /locus_tag="CMS_2787" /old_locus_tag="CMS2787" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711422.1" /db_xref="GI:170783088" /db_xref="GeneID:6158324" /translation="MSEKEDDMHVVQLGYLSEVDGAPNVTLQDPRTRERKGYRLEHPM FELLQSLDPTETVHDFTPEEWHYLRGFARLGIVALTSDHDSVDELTFIPVPRADISFV GMTDSGYQLTSTLGEKFELSEHSTRFLGMADSERSLAEIVSAVHQEALDRVEERPAVE EMERESGASFGEFLEAEAYRFIRALRGNEAVSFEPHTIPVAVEEPSPGHAETGRLSPA GESGE" gene complement(2934757..2935344) /locus_tag="CMS_2788" /old_locus_tag="CMS2788" /db_xref="GeneID:6158325" CDS complement(2934757..2935344) /locus_tag="CMS_2788" /old_locus_tag="CMS2788" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711423.1" /db_xref="GI:170783089" /db_xref="GeneID:6158325" /translation="MHVVPLGHLSDSAGGPIVTVQDPSTEEARSYRLSPPLADLVPSL DPRETDRAFTEEESRLVAGMARLGVVALVADDAPLGDLRFIPVTRADVRFDAALDDGF RFDSDLHRPFELSEYGTRLLEKVDGRTDLGTIAEAVRQEALADEGDRAEIAEHQRTHG QSFEDFLVAEAYRFVDALRGNPTVTFEPAPARTCR" gene complement(2935385..2935981) /locus_tag="CMS_2789" /old_locus_tag="CMS2789" /db_xref="GeneID:6158326" CDS complement(2935385..2935981) /locus_tag="CMS_2789" /old_locus_tag="CMS2789" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711424.1" /db_xref="GI:170783090" /db_xref="GeneID:6158326" /translation="MHVIQLGQLHDSEPTPDITVQDPVTDEARSYTLTPRLLDLIRRV DPVAADQPFTADERRILRNMAGIGVIALVPDDAPFTRFDFIPATRADILFDAALEEGY RLTSELGGPFELSESGARFLHEADGRRTLGEIMQSVRDRALADDDERREIEEDERRGI SFDDLLRAEAFRFAKACIGHPALSLEPGSACPVDEPAT" gene complement(2936026..2936799) /locus_tag="CMS_2790" /old_locus_tag="CMS2790" /db_xref="GeneID:6158327" CDS complement(2936026..2936799) /locus_tag="CMS_2790" /old_locus_tag="CMS2790" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711425.1" /db_xref="GI:170783091" /db_xref="GeneID:6158327" /translation="MFEPQMDDDAATKPIVEDGGGGVTAPGSPTHPFRLLPDETVLGT YPVARRTRPLGRLVSYLFVTDSRVIYSAEAKTVTSSSTYSREYKIDKVDGIEVGRDTG YDALGVAALAGTAINLLVSLIAWLVLVGAGSSSLDGLAWLFGVGTFFALVLGVIGFFV LRSRAAVLSVITGSQRQEITTRHDVAKILFVLVLFVALGPIAILSAALWVLARELGIV SASDAGLYIRTDDLDRISFEAGALILDAQARGKLAGSWD" misc_feature complement(order(2936170..2936238,2936317..2936385, 2936413..2936481)) /locus_tag="CMS_2790" /old_locus_tag="CMS2790" /note="3 probable transmembrane helices predicted for CMS2790 by TMHMM2.0 at aa 107-129, 139-161 and 188-210" gene complement(2936804..2938879) /locus_tag="CMS_2791" /old_locus_tag="CMS2791" /db_xref="GeneID:6158328" CDS complement(2936804..2938879) /locus_tag="CMS_2791" /old_locus_tag="CMS2791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711426.1" /db_xref="GI:170783092" /db_xref="GeneID:6158328" /translation="MAGRRLPLLSAHDQVSRRVHPVARRRPTRDAPGARGRRRLAAAV LGIVIAFALSACGAVIDTTMSVDAGGSGSRQMTVTLNQQDLAKVPGGSAAIDASIRRH LPSPLAYSGISATADGGITATFTLAFSSPADYSGEVAALLSSRTGSSAPRLAVTDSAL VQGIELQESFTSSDLLGWMFSGLIADSVVDGSEGVGSLREEGRAAIVFAGERHADVGD PLSYSHEENHGFDGVSMATDASDPGRITRTITFRAEQGRDQADLARLDAFVRGAVPAG GEVAAPEPGTWTLAFTGDAAAIQADTTTALGGGATRFAVDISPRADDPSQEVMQLTDT ASCAAVCAVDAIGRSGVPDRFTAGADYSPESMDVGSMDVGSTTAGPVSFVLSPPISSL ASHLSIGSSGNVTGTTTIVVPKSSADAVGDGFLQRYRPDPDVGTIASDAGPDSTTYTV SIAGSSVEDFTDRYARWAPGASVGARLVDDGLLVQHSEYAIDPGFDALASGHRVLDGT DVTLDLPFGSWVAGAQGGSGADGARITVVRTSSLTPAGVAAVAVLALALAVGLALLIR RRRAVAARVATARARLDAALAARRRTRLDERLPIEPSLGADAVEHGSLLAFPAPSAMA GVLTGALDVDPPPEVVSGPPHRGALAMAPPPRSTVPVPGPTLLDARPTSATTSTTTRT TDRTDTWGA" misc_feature complement(order(2937185..2937253,2938694..2938762)) /locus_tag="CMS_2791" /old_locus_tag="CMS2791" /note="2 probable transmembrane helices predicted for CMS2791 by TMHMM2.0 at aa 49-71 and 552-574" misc_feature complement(2937422..2937457) /locus_tag="CMS_2791" /old_locus_tag="CMS2791" /note="PS00136 Serine proteases, subtilase family,aspartic acid active site." gene complement(2938970..2939284) /locus_tag="CMS_2792" /old_locus_tag="CMS2792" /db_xref="GeneID:6158329" CDS complement(2938970..2939284) /locus_tag="CMS_2792" /old_locus_tag="CMS2792" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711427.1" /db_xref="GI:170783093" /db_xref="GeneID:6158329" /translation="MPALLADIARFAASARRVTARGHARFVDPDDDEQRRIARSLVVD LSSAADRLPASFRDARPEIDWSGIRAVRNYVAHDYDGTDMEVLWRVVAVEFPRIADAL SA" misc_feature complement(2938979..2939215) /locus_tag="CMS_2792" /old_locus_tag="CMS2792" /inference="protein motif:HMMPfam:PF01934" /note="HMMPfam hit to PF01934, Protein of unknown function DUF86, score 7.3e-06" gene complement(2939302..2939763) /locus_tag="CMS_2793" /old_locus_tag="CMS2793" /db_xref="GeneID:6158330" CDS complement(2939302..2939763) /locus_tag="CMS_2793" /old_locus_tag="CMS2793" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001711428.1" /db_xref="GI:170783094" /db_xref="GeneID:6158330" /translation="MSDASVGEELRRLRREAALSQRELAAVTGVPQPNIAAYESGRRQ PSPETLVRLGAALRAPSLDRVRASRGPILEVAARRRLSDVRVFGSVARGDAAAGSDLD LLVHPAADASLFDLAGFMAEVAALLGIDVDVVSDRGSGPMMDRIRAEAVAL" misc_feature complement(2939569..2939736) /locus_tag="CMS_2793" /old_locus_tag="CMS2793" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 2.3e-13" gene complement(2939803..2939874) /locus_tag="CMS_r013" /old_locus_tag="CMSr013" /db_xref="GeneID:6158331" tRNA complement(2939803..2939874) /locus_tag="CMS_r013" /old_locus_tag="CMSr013" /product="tRNA-Arg" /db_xref="GeneID:6158331" gene 2940039..2943842 /locus_tag="CMS_2795" /old_locus_tag="CMS2795" /db_xref="GeneID:6159032" CDS 2940039..2943842 /locus_tag="CMS_2795" /old_locus_tag="CMS2795" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711429.1" /db_xref="GI:170783095" /db_xref="GeneID:6159032" /translation="MWRANERSDDDDLLSGFAAEHLEDPHVNASHNSTSPHDLRVGDV QLGSGNVAEPRWREWREQLAGIGGPSPLLHFVDAPGSRIELSTTHPGGLAQFITGKTT LLSSLIRDDLALRSARKAANRITQKGIELVSARGIESIHLAIGLAEWRFADEQFRAPV LLRPLAIRRHGSDYEVRLKGQPFLNPALARALEEQFQITLDAESFVALAVQNGAFKPQ PVIDRLRGLTSHLPAFAVQPRLVVSSFAEVGRALAEDAEHLDHLVIDAIAGNPTAKWG VGEAYAPVDPIPQDQRPPVTDTLLLDADPEQEYVIAQINAGNSLVVTTLPGTGGTQTI VNSIGCLVAQNKRVLVVSPRASSLKGIGQRLADVGLPGLAVAPKSLKRDVVQSIVRNE KAAPAQTAEVDDALVRLRHVLLDYRFALGRPDKDLGVSVLDALGELSRLALLPDPPAT TARLTRDAVTAIAHDRASAAASLVKAASLGEFRYGPGDSPWYGATFSTSAAATHAHDL AKSLSADGLPRLLERADELIGQTRMRAYKSIDELGVYLRLLLDVRETLDKFQPVVFDR SLSEIIAATGSRRDAPEMTSITRRRLRKLAREYVRPGVHISDMHESLKAIQKQRILWQ RYVAVGSTPEVPRGISDVHVRYQEVAADLKVLDAPLSMLTRPTPLGELPVDELREKVA QLAEDSEVLQNLQERTSLLAELRRLDLDPLLRDLSDRHVPQEAVAAELELAWWQSVLE QMLAGDKALLNANTSVLDRLESDFRLVDEAHATASAGLLAWQLAETWKIGVVDWPEEA HHLRQLLGGSAPVDAAALHHSAPHLSRTIAPVWLASPYEVPAITDEMPFDAVFLVDAG AMTLAEALGGIRRGKQTVVFGDPVTQTPSPFTIAVVPQSERSTPQLADDDSTLEERHA DSALARLGELLPTLSLTRSYRAGGEDLAELVNRRFYGGRIQSLPWAGTFLGHGSLSLD FVADGHGMPDEDTGAVESVDAEVIRVVELVLDHASHRPRESLMVITASARHAVRVQQA VLHAAAKRSDVTEFFIGDRAEPFMVATLEQCVAQSRDRVIFSVGYGRTPHGRVLSNFG ALAAPGGERLLAVAMTRARRSMVVVSCFQPSDIDQDRMKHGIVALAQILSEAEARFKE DPIPDDGDAMLVDLARRLEGLGLAPALGHRDKLGLVASYGGRAIAIETDPVVNQTSLR ESLRLRPEMLKRLGWHYLRVHSFELFADPDAVARRIATALGAISDAHPATAPVQVQAG AHRAE" misc_feature 2940318..2940341 /locus_tag="CMS_2795" /old_locus_tag="CMS2795" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2944152..2945114) /locus_tag="CMS_2796" /old_locus_tag="CMS2796" /db_xref="GeneID:6158332" CDS complement(2944152..2945114) /locus_tag="CMS_2796" /old_locus_tag="CMS2796" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711430.1" /db_xref="GI:170783096" /db_xref="GeneID:6158332" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(2944164..2944706) /locus_tag="CMS_2796" /old_locus_tag="CMS2796" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 2945262..2946332 /locus_tag="CMS_2797" /old_locus_tag="CMS2797" /db_xref="GeneID:6158333" CDS 2945262..2946332 /locus_tag="CMS_2797" /old_locus_tag="CMS2797" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711431.1" /db_xref="GI:170783097" /db_xref="GeneID:6158333" /translation="MTDIQDRSSAPTSAPTADAAPTDTAPSDTAAIEALELDLELDLD LDLLAEELLLEPAAPAAPVIPATSPHVRGAARRAARTSRSIRRRTVVMRAATVLLTAL VAVTLLFQASGGRWFVVQTPSMGTTAPVGTLLLTTPVLLEDVQPGDVVSFHPSTTPDE TYTHRVIAVDADGLTTQGDINGAVDPWKTDQAHLVGEATTILPGFGSLAKGVPLMLAG LVIVMILTRLIGSPTHRASMRMLGGALVAAFTVFLLKPFVGLVVLDAATRGSDVEATV VSTGILPIRIAAEGGTATTLAAGQVGTITAPAGDAGRFHDVSSTLDLPLWGWVVFFGL CAIPLIWTLVVGLPAEREERRA" misc_feature order(2945529..2945597,2945895..2945948,2945982..2946050, 2946234..2946302) /locus_tag="CMS_2797" /old_locus_tag="CMS2797" /note="4 probable transmembrane helices predicted for CMS2797 by TMHMM2.0 at aa 90-112, 212-229, 241-263 and 325-347" misc_feature 2945613..2945816 /locus_tag="CMS_2797" /old_locus_tag="CMS2797" /inference="protein motif:HMMPfam:PF00717" /note="HMMPfam hit to PF00717, Peptidase S24, S26A and S26B, score 0.022" gene 2946329..2947240 /locus_tag="CMS_2798" /old_locus_tag="CMS2798" /db_xref="GeneID:6158334" CDS 2946329..2947240 /locus_tag="CMS_2798" /old_locus_tag="CMS2798" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711432.1" /db_xref="GI:170783098" /db_xref="GeneID:6158334" /translation="MRLVDRLLGRRAGGPAADASPRRGSRLAGIAAATSAAALGAVLF LAPGTSGAYTAAITNTNNTAASSAAYFTCTSALAADRADALFAYAFTEAAGSSRATDI DSGAYPGTYRGSMRTTTTSPQACPRDSGSSYLLDGSSSQVTNGLQQNAPAAFSTELWF KTTVKGGKLIGFGDSQTGLSGSYDRHTYVNTAGQLVFGVYTQAAGIMTVTSPGVVTDG AWHHVVSTMSPTAGMTLWLDGVAVAANSTYRTAESTTGWWRIGYDNLDTWPGAGSRYF AGSMRFAAVYSTALTGQQVRNHYNAGR" gene complement(2947317..2948297) /locus_tag="CMS_2799" /old_locus_tag="CMS2799" /db_xref="GeneID:6158335" CDS complement(2947317..2948297) /locus_tag="CMS_2799" /old_locus_tag="CMS2799" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711433.1" /db_xref="GI:170783099" /db_xref="GeneID:6158335" /translation="MSVQRIPASLLARGTAALAGVVVLAGCSAPGPASAASDTTPDAT TAVATAAPVAGDGGTTADRTDSDTEDRNAATISTLFTAAFPDPASAGAQAAVLAAVAP DSTANGVGAKAGPSGVLDEFASAHQRVPGAHAVIKHIAADGDLVAVHWQVASNPDDER TGEAAVDLFRLADGKVTARWTFDQPIPQGKPASGNTNTMFSDLYQGGADAPELTEQQE EANRQLAVGAYDTLFRDHDASVLDRSFDPAYLQHNTVAANGTAALKAFFSGGAQFPAQ QSVISIADDDLVWTFSQPVGAKADDPFLAADIFRVDGGLIREHWDVVPAS" sig_peptide complement(2947317..2947421) /locus_tag="CMS_2799" /old_locus_tag="CMS2799" /note="Signal peptide predicted for CMS2799 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.920 between residues 35 and 36" misc_feature complement(2948217..2948249) /locus_tag="CMS_2799" /old_locus_tag="CMS2799" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2948649..2949335) /locus_tag="CMS_2800" /old_locus_tag="CMS2800" /db_xref="GeneID:6158336" CDS complement(2948649..2949335) /locus_tag="CMS_2800" /old_locus_tag="CMS2800" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711434.1" /db_xref="GI:170783100" /db_xref="GeneID:6158336" /translation="MRNLTKSVFGLATAGFLVVGLAACSTPAETPSSSSKPAATATTE ANPTPLATIPKLTGVDTKVTLDSGFTGALTTLGLTPGVIGTATLDGSTGTLAFPITGG NVKYFDPQQSYRPYVQGEIDHAGSGISLTAGSTVVKLTDFVIDPGTSRLTGSVQVGDG EVMKDVYIFNLDGTTLKPLAMEGDNAVLEGTTVKVSPDAASLLNSTFGTTAVTDQLVV GIAKITVNTK" sig_peptide complement(2948649..2948783) /locus_tag="CMS_2800" /old_locus_tag="CMS2800" /note="Signal peptide predicted for CMS2800 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.438 between residues 45 and 46" misc_feature complement(2949249..2949317) /locus_tag="CMS_2800" /old_locus_tag="CMS2800" /note="1 probable transmembrane helix predicted for CMS2800 by TMHMM2.0 at aa 7-29" misc_feature complement(2949264..2949296) /locus_tag="CMS_2800" /old_locus_tag="CMS2800" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(2949527..2950171) /locus_tag="CMS_2801" /old_locus_tag="CMS2801" /db_xref="GeneID:6158337" CDS complement(2949527..2950171) /locus_tag="CMS_2801" /old_locus_tag="CMS2801" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711435.1" /db_xref="GI:170783101" /db_xref="GeneID:6158337" /translation="MRRHRAARTADVAPASYGRRSAHRPAPRARPLLVPAIAVVIALA GAGTAYAVLADRATTTVSVTAGAVELDWGAGGADQLAVPIAGLRPGDAQVRLVDLANT GTVTASELMVTLGGTAVASTSDGFQVAVDRCTVAWTGAPGSATCAGTTTSVVADRPAS GRFALPGSPARAVGGRDNLRITVRLPASAPTTAQGATGSVTLQVDGNQRPGTQR" sig_peptide complement(2949527..2949679) /locus_tag="CMS_2801" /old_locus_tag="CMS2801" /note="Signal peptide predicted for CMS2801 by SignalP 2.0 HMM (Signal peptide probability 0.991) with cleavage site probability 0.744 between residues 51 and 52" misc_feature complement(2950010..2950078) /locus_tag="CMS_2801" /old_locus_tag="CMS2801" /note="1 probable transmembrane helix predicted for CMS2801 by TMHMM2.0 at aa 32-54" gene complement(2950171..2950959) /locus_tag="CMS_2802" /old_locus_tag="CMS2802" /db_xref="GeneID:6158338" CDS complement(2950171..2950959) /locus_tag="CMS_2802" /old_locus_tag="CMS2802" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711436.1" /db_xref="GI:170783102" /db_xref="GeneID:6158338" /translation="MTRERADRAARAAAAPATEPAAPVRAQARRSPARRALGVLGGLL TAAVGLAVVAVVALSVLGVTRFVPVLSDSMAPGMPVGSLAITAPTPRAEVATGDVVVF TAPSGPRVRVIHRVTHVFGPEDAERLDGWSDDRLAIQTKGDNNPSGDPWIVTIGDDAV WERTSVVPFLGWPFVWLGDPITRAIAFAVVGAVGTIWLLTVIWRRPPRPVADADASAD ASASASADASASASASASADGAPDGTDARTGFHADPARTTGGPA" misc_feature complement(order(2950351..2950419,2950786..2950854)) /locus_tag="CMS_2802" /old_locus_tag="CMS2802" /note="2 probable transmembrane helices predicted for CMS2802 by TMHMM2.0 at aa 36-58 and 181-203" gene complement(2950956..2951777) /locus_tag="CMS_2803" /old_locus_tag="CMS2803" /db_xref="GeneID:6158339" CDS complement(2950956..2951777) /locus_tag="CMS_2803" /old_locus_tag="CMS2803" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface-anchored protein" /protein_id="YP_001711437.1" /db_xref="GI:170783103" /db_xref="GeneID:6158339" /translation="MRAHHGTGSVAAAALCLTLVASGAAAPASAAAGSVAARAAAPAA IDSPALEVRELTGPDIPLDDLAPGDTVDWAADVTNVSAAGSPLAVRLDAMRSMALTGD AEGGIQLSVRLCADGFETLTAPMRCRGPVEPLGSGPAATLDGVVTRTPLEPGQTVGIA VRVQFPERADNRMESTAGMVRVSFALVGDGGTGTDPDPAPGGGAGTGNGGGTGTGAGT SPAGSAPAADAPRDLLPVTGRDIASALAGALLALLGGGILLLAGRHRRRTAEAAS" sig_peptide complement(2950956..2951045) /locus_tag="CMS_2803" /old_locus_tag="CMS2803" /note="Signal peptide predicted for CMS2803 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.322 between residues 30 and 31" misc_feature complement(2950992..2951060) /locus_tag="CMS_2803" /old_locus_tag="CMS2803" /note="1 probable transmembrane helix predicted for CMS2803 by TMHMM2.0 at aa 240-262" gene complement(2951905..2952606) /locus_tag="CMS_2804" /old_locus_tag="CMS2804" /db_xref="GeneID:6158340" CDS complement(2951905..2952606) /locus_tag="CMS_2804" /old_locus_tag="CMS2804" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711438.1" /db_xref="GI:170783104" /db_xref="GeneID:6158340" /translation="MSTTTAPQRRRPWKKIVATGAVVAVGTLITGGAFAIFTDSDTAT LQADAGQLDIVATGDYTVSDIAPGDTVQRPILLELPDATNDGDLVESVQLSYAVTAET PGTDDPALAGGGESLVSGAAGLTYSLQTCVGGEWTSATAPVGAYTCSGTVQQTGAGTL ASITGAGNSVTLLPANFGVAPTADGTFPSDTADVTLNTLMVLQLPDTADNDYENAAAS LTFTAAAIQRDGLQR" sig_peptide complement(2951905..2952009) /locus_tag="CMS_2804" /old_locus_tag="CMS2804" /note="Signal peptide predicted for CMS2804 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.534 between residues 35 and 36" misc_feature complement(2952493..2952561) /locus_tag="CMS_2804" /old_locus_tag="CMS2804" /note="1 probable transmembrane helix predicted for CMS2804 by TMHMM2.0 at aa 16-38" gene complement(2952756..2956151) /locus_tag="CMS_2805" /old_locus_tag="CMS2805" /db_xref="GeneID:6158341" CDS complement(2952756..2956151) /locus_tag="CMS_2805" /old_locus_tag="CMS2805" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711439.1" /db_xref="GI:170783105" /db_xref="GeneID:6158341" /translation="MARARAHRASSRPPAPRSRGTRRLAALVIAALAAVTLVASPAAP AVAAPLNVTESFTGTSVADPAWRTLGAACLTRATVAPHAGQSGVGVCASRTGAPASAA TPGSLQLTDNTVNSSGGIVYDTPLPVSGGLDVRFDQFQYGQGTNGNEGIAFFLADGSR PVAQIGGGAGSLGYAQTTARAGIDGAYLGVGLDSGGSFSVAADGRGTGCAQVAPGSRP NAVALRGAGQGGTGYCYLSGSGLGTSRQLHAALPSSSNAAPPGTAGRTIRVQVSNAAL PVVTVSYGASAGLPDAQLAVVHQYTMTTSPPASVKLGFTATTGTLTDTHLIQNVRIAS VAPTSGVLQLTKTLDPAFAQASYAEGQDVRYRFSITAPQLLSVINDVQVADPLVPSVQ CSANAFLLAGTITCTGAHRVTAQEAMQGSLVNTAVASGQPVLSSRLSSNADSVSVPIT RPSPLLALTKVGTLTDTNVNGVADAGERIAYSFIARNSGNVTLQGVAVTDPRVTGVAP ATATLAPGASQTFTSTAYTVTAADVAAGTPISNTATVTGRTLAGQEAPAALSTVTTPV RAAGAITLTKDASLVGGSVPGATVTYTLRATNTGGAAMTGVTIADPLAGLSAMAYTWP GTAGTLAVGASVTATATYSVKQSDVDAGQIANTATASGTLSGGTVVQGSASRTLALAR TATLDFTKTASPSNVIAAGDIVTYGFLVRNTGTTTLTGVGVADPRPGVSALTYTWPQT AGTLAPGHVVTATARYSATAADVQAGSIVNTATATATTSAGATVTRTASATVTAVPDP VADAATTAQGTAVVIDVLANDGRAATGAAFSRAQLSATPKLIGGASGPVPTAPASGSV TCVDSGTERGRCTYSPILGFTGVDVFDYALSSSVDTWNVRVTVTVTPVNRTPVARPDR LVATTGGATVTIDPRANDTDPAGDALAITSAPQPAALRGTLTCAAALCTYVPPTDGWT GSVVVTYSITDRPAAPATGITATSTLTVHVDPAPLTSRGFTDRADTSLGVSTGTWAGT SSITTATASCVAGRPVTGLAWAAAPGATDWVVERRLDGTTPGAWTTVARLAGTATSFS DDRLGESRSYQWRVRPDLQRWLGVASAPSIAVAQPAAFSAAGC" sig_peptide complement(2952756..2952896) /locus_tag="CMS_2805" /old_locus_tag="CMS2805" /note="Signal peptide predicted for CMS2805 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.541 between residues 47 and 48" misc_feature complement(2954286..2954510) /locus_tag="CMS_2805" /old_locus_tag="CMS2805" /inference="protein motif:HMMPfam:PF01345" /note="HMMPfam hit to PF01345, Protein of unknown function DUF11, score 4.3e-07" misc_feature complement(2956014..2956082) /locus_tag="CMS_2805" /old_locus_tag="CMS2805" /note="1 probable transmembrane helix predicted for CMS2805 by TMHMM2.0 at aa 24-46" gene 2956555..2958426 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /db_xref="GeneID:6158342" CDS 2956555..2958426 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /note="heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria" /codon_start=1 /transl_table=11 /product="molecular chaperone DnaK" /protein_id="YP_001711440.1" /db_xref="GI:170783106" /db_xref="GeneID:6158342" /translation="MARAVGIDLGTTNSVVSVLEGGEPTVIANAEGARTTPSVVAFTK DGEVLVGETAKRQNVTNVDRTISSVKRHMGTDWTVGIDDKKYTSQELSARILGKLKRD AEQYLGDSVTDAVITVPAYFNDAERQATKEAGEIAGLNVLRIINEPTAAALAYGLDRG KEDELILVFDLGGGTFDVSLLEVGKDDDFSTIQVRSTAGDNRLGGDDWDQRIVDHLVK RFKESTGVDVSNDKIAKQRLKEAAEQAKKELSSSTSTSIQLPYLSLTENGPANLDETL TRAKFEELTNDLLERTRKPFEDVIREAGVSVGDVAHVVLVGGSTRMPAVVDLVKKLTG GKEPNKGVNPDEVVAVGAALQAGVLKGERKDVLLIDVTPLSLGIETKGGIMTKLIERN TAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKNLGTFELTGIAPAPRGIPQVE VTFDIDANGIVHVSAKDKGTGKEQSMTITGGSSLAKEDIERMVREAEEHAAEDKTRRE QAEVRNNAEQLAYSIDKLIKENDDKLPEDVKSEVQGDVDGLKSALAGDDETAVKTAFD KLSASQTKLGEAIYAQGQQEQAAGEAPEGASEAKKDDEDIVDAEVVDEDDEDKKTDR" misc_feature 2956564..2958297 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /inference="protein motif:HMMPfam:PF00012" /note="HMMPfam hit to PF00012, Heat shock protein Hsp70,score 0" misc_feature 2956573..2956596 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /note="PS00297 Heat shock hsp70 proteins family signature 1." misc_feature 2957056..2957097 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /note="PS00329 Heat shock hsp70 proteins family signature 2." misc_feature 2957491..2957535 /gene="dnaK" /locus_tag="CMS_2806" /old_locus_tag="CMS2806" /note="PS01036 Heat shock hsp70 proteins family signature 3." gene 2958423..2959076 /gene="grpE" /locus_tag="CMS_2807" /old_locus_tag="CMS2807" /db_xref="GeneID:6158669" CDS 2958423..2959076 /gene="grpE" /locus_tag="CMS_2807" /old_locus_tag="CMS2807" /codon_start=1 /transl_table=11 /product="GrpE heat shock protein" /protein_id="YP_001711441.1" /db_xref="GI:170783107" /db_xref="GeneID:6158669" /translation="MTEDTANGEGTTPEDEGAEQSAPASPAGPDATADQAADEASVPG ADGAFVEAEGPDVETTDPMDEELQDLIEQTRAEPAEGDSEHLADLKRVTAEYANYRKR TEANREIERQRAVGDVVKGILPVLDDLDRAEKHGDLAEGGPLTAIVAKLRTNVERIGL VKVGAVGDAFDPQVHEAIFQKPNPEVQVDTVADVVESGYYIGETLLRAAKVVVDKPE" misc_feature 2958594..2959067 /gene="grpE" /locus_tag="CMS_2807" /old_locus_tag="CMS2807" /inference="protein motif:HMMPfam:PF01025" /note="HMMPfam hit to PF01025, GrpE protein, score 3e-33" misc_feature 2958930..2959061 /gene="grpE" /locus_tag="CMS_2807" /old_locus_tag="CMS2807" /note="PS01071 grpE protein signature." gene 2959197..2960210 /gene="dnaJ" /locus_tag="CMS_2808" /old_locus_tag="CMS2808" /db_xref="GeneID:6158737" CDS 2959197..2960210 /gene="dnaJ" /locus_tag="CMS_2808" /old_locus_tag="CMS2808" /codon_start=1 /transl_table=11 /product="chaperone protein DnaJ" /protein_id="YP_001711442.1" /db_xref="GI:170783108" /db_xref="GeneID:6158737" /translation="MASQDWFDKDFYKVLGVSKDVSEADLKKAYRKLARQYHPDSNPD PSAEARFKEISEAHAVLADKEQRKEYDQIRAMGSGARFSAPGAGAPGGGFEDVFGGMF GQQSGGRGRRTAGFGSGQPQYSQGGFEDILGGMFGNGGFGQSTGGYRGYGAPTKGRDV TASTTVDFLTAVQGDVVRLQDSDGRPLTVRVPAGVSDGQKIRLAGKGEPSGDGGASGD IILTVHVRPHPVFERDGLNLRVNVPVTFPEATLGATIEVPTLGGDPVRLKVAPGTSSG KVLRVKGRGVTTPKGTGDLLARIEVAVPSRLTDAQRVALDAFASSGPAEDPRRELIER ARS" misc_feature 2959224..2959418 /gene="dnaJ" /locus_tag="CMS_2808" /old_locus_tag="CMS2808" /inference="protein motif:HMMPfam:PF00226" /note="HMMPfam hit to PF00226, Heat shock protein DnaJ,N-terminal, score 1.6e-33" misc_feature 2959347..2959406 /gene="dnaJ" /locus_tag="CMS_2808" /old_locus_tag="CMS2808" /note="PS00636 Nt-dnaJ domain signature." misc_feature 2959791..2960153 /gene="dnaJ" /locus_tag="CMS_2808" /old_locus_tag="CMS2808" /inference="protein motif:HMMPfam:PF01556" /note="HMMPfam hit to PF01556, Chaperone DnaJ, C-terminal,score 1.6e-47" gene 2960212..2960679 /gene="hspR" /locus_tag="CMS_2809" /old_locus_tag="CMS2809" /db_xref="GeneID:6158668" CDS 2960212..2960679 /gene="hspR" /locus_tag="CMS_2809" /old_locus_tag="CMS2809" /codon_start=1 /transl_table=11 /product="putative heat shock protein HspR" /protein_id="YP_001711443.1" /db_xref="GI:170783109" /db_xref="GeneID:6158668" /translation="MDPRDTMDEDAPVFVISVAAELSGMHPQTLRQYDRLGLVSPTRT AGRSRRYSMRDIVQLREVARLGAEGVSLEGIARILELENQVSELRGRVRQLESALADE LLSRPGRRVFAARGDGDVVSLRAGVRPSQPTEVVLYRAALAMPDDDRSERDAR" misc_feature 2960254..2960364 /gene="hspR" /locus_tag="CMS_2809" /old_locus_tag="CMS2809" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 6e-09" gene 2960676..2961932 /locus_tag="CMS_2810" /old_locus_tag="CMS2810" /db_xref="GeneID:6158761" CDS 2960676..2961932 /locus_tag="CMS_2810" /old_locus_tag="CMS2810" /codon_start=1 /transl_table=11 /product="putative methyl transferase" /protein_id="YP_001711444.1" /db_xref="GI:170783110" /db_xref="GeneID:6158761" /translation="MSDAPAAAPDAAAPDAARVSAADDLLDLGALRRRPDVEAENLFA VDAADRLLLDELVALLAAASADGRPLRPEDVVVIGDHYGALALGAAAALRRAGAADPV RIRVHQDALASETALRLNAELIGETAEIAHHGLDAALAAHARVVIARLPCSLDALDEW AGVVAGAAADDVTVLAGGRVKHMTPAMTDVLRRRFGDVHATLARQKSRILVAREPVRP AAAADADAAYPRSESHPDLGLEVRAHGAAFAGARIDIGTRFLLSFLPDLPEDARVAVD LGCGTGVIASAVALARPGIRVIATDQSWAAVDSARATVAANGVAEWVTVVRDDAGSTV PDGSADLVLLNPPFHTGATVHAGLAPRLFAAAARMLRPGGQLWTVYNSPLGYRPQLTR IVGPTREAGRNAKFTVAVSTKPDHRA" misc_feature 2961699..2961719 /locus_tag="CMS_2810" /old_locus_tag="CMS2810" /note="PS00092 N-6 Adenine-specific DNA methylases signature." misc_feature 2961762..2961914 /locus_tag="CMS_2810" /old_locus_tag="CMS2810" /inference="protein motif:HMMPfam:PF05175" /note="HMMPfam hit to PF05175, Methyltransferase small,score 1.5e-05" gene 2962030..2962992 /locus_tag="CMS_2811" /old_locus_tag="CMS2811" /db_xref="GeneID:6158343" CDS 2962030..2962992 /locus_tag="CMS_2811" /old_locus_tag="CMS2811" /note="P/R part of the NRPS disruption" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711445.1" /db_xref="GI:170783111" /db_xref="GeneID:6158343" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 2962438..2962980 /locus_tag="CMS_2811" /old_locus_tag="CMS2811" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 2963060..2964838 /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /pseudo /db_xref="GeneID:6158344" misc_feature 2963147..2963200 /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 31" /pseudo misc_feature 2963201..2963254 /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 5.2" /pseudo misc_feature order(2963372..2963440,2963483..2963551,2964089..2964157, 2964185..2964253) /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /note="4 probable transmembrane helices predicted for CMS2812 by TMHMM2.0 at aa 105-127, 142-164, 344-366 and 376-398" /pseudo misc_feature 2964476..2964529 /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 61" /pseudo misc_feature 2964581..2964634 /locus_tag="CMS_2812" /old_locus_tag="CMS2812" /inference="protein motif:HMMPfam:PF00132" /note="HMMPfam hit to PF00132, Bacterial transferase hexapeptide repeat, score 0.61" /pseudo gene 2964835..2966148 /locus_tag="CMS_2813" /old_locus_tag="CMS2813" /db_xref="GeneID:6158345" CDS 2964835..2966148 /locus_tag="CMS_2813" /old_locus_tag="CMS2813" /codon_start=1 /transl_table=11 /product="putative metallopeptidase" /protein_id="YP_001711446.1" /db_xref="GI:170783112" /db_xref="GeneID:6158345" /translation="MRAAAGPSSGDAYTPEVGSTAYAVGRYDLDLDYRVARNRLKARA VITAVAREPLPRLELDLTGLRAGDVRVDGRRETRHVQRGGRLVVTPAAPIPAGATFTV DVAYSGEPGPRRTVWGDLGWEELGDGVLVASQPSGASTWFPCNDRPDDRAAFRIRIAC EVDYSVIASGRLVSRLERSGRATWTYEQDAPTAPYLATVQIGRYSERRVPAGSTQAVF AYPKPREARVLQDLALVPRMMAFFETLFGPYPFDEYRVVVTDDELEIPLEAQAMAVLG SNHADGTGGSERLVAHELAHQWFGNAVGLASWQHIWLNEGFACYAEWLWSEEAGGATA DQLARQHHTRLDRYGTQLGIGDPGPESMFDDVVYKRGALAVHALRLTLGDAAWRQLLL KWTDPAWTAPRTTADLVGAAGDAGALLRAWLADGPLPALPRVRRR" misc_feature 2964889..2965947 /locus_tag="CMS_2813" /old_locus_tag="CMS2813" /inference="protein motif:HMMPfam:PF01433" /note="HMMPfam hit to PF01433, Peptidase M1, membrane alanine aminopeptidase, score 7.7e-16" misc_feature 2965699..2965728 /locus_tag="CMS_2813" /old_locus_tag="CMS2813" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." gene 2966186..2967424 /locus_tag="CMS_2814" /old_locus_tag="CMS2814" /db_xref="GeneID:6158346" CDS 2966186..2967424 /locus_tag="CMS_2814" /old_locus_tag="CMS2814" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="YP_001711447.1" /db_xref="GI:170783113" /db_xref="GeneID:6158346" /translation="MLYFGSMYNDDGRHPSESLSPYTPGSVPTSLPGRADKLQQFREA AQRMASDGLFIPRVHVDHGPRGIGKTSLLREAQRIFGGYGVRTVLITADPDEDLVRSL LGELRQVVGTGTRLRKAALEAIDSATVTLGAPGIVQVGVSMTPEKRRTAASAKQVQQA IRAAIDAVIHDGDAGVAILIDEIQEADPESLRTLAYAWQEMAPLRAFEPGQPRTALFA VGLPGAPTKINKAVTFSERFSFQPMHGLSDAGAREALEGTATTVAVNWDVAALDRAVA ESSGYPYKVQLIGDASWRAAAGRLARDGLRPDDTIALEDVLAALPSVGAEMDTLFTAR WRSASPRQQDMLVAVARLGGVDVKRADLAEALSTTTRAISVARQKLLDKGLLDANKHG HLSFTVPGFTEFVLDQAENE" misc_feature 2966372..2966395 /locus_tag="CMS_2814" /old_locus_tag="CMS2814" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2967452..2968030) /locus_tag="CMS_2815" /old_locus_tag="CMS2815" /db_xref="GeneID:6158347" CDS complement(2967452..2968030) /locus_tag="CMS_2815" /old_locus_tag="CMS2815" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711448.1" /db_xref="GI:170783114" /db_xref="GeneID:6158347" /translation="MIPAPAVVHVSVARVAASADRSARTAAGRDALRALAAGLVGADP AAVTVRARCATCGGEHGRPVLGGSRALDGLHASVAHAGDAVVVAVSADGPVGIDAEPR DREAPPGMALAGWVRIEAVLKADGRGLLVDPGRVRFAGDADGTVAWIDGEEARYRVVE VALASDLVAAVARFAGPAGAQPLTAEIRSLAL" gene complement(2968051..2968755) /locus_tag="CMS_2816" /old_locus_tag="CMS2816" /db_xref="GeneID:6158348" CDS complement(2968051..2968755) /locus_tag="CMS_2816" /old_locus_tag="CMS2816" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711449.1" /db_xref="GI:170783115" /db_xref="GeneID:6158348" /translation="MNRTRPDGIREPGRMQTSEAVDRARTLWADGRRRDAIVELRTRV RKEPGDAVARLLLASWYREVRAPDQAARWGIALHGWTTPRERELLARLIASSGVRDEH LGRFLALPAGERPAELDEVMVVVGGLRAPDGWRGAKPLRRSDRRSQVVRTLAVLGWLM LGGSLLVSGCVAMTGDDATPLARGGAALALLLLAVAAVVEGTRARRGWWWVGPSTVLL AGALVAGAVVLARMAA" misc_feature complement(order(2968066..2968134,2968153..2968221, 2968231..2968299)) /locus_tag="CMS_2816" /old_locus_tag="CMS2816" /note="3 probable transmembrane helices predicted for CMS2816 by TMHMM2.0 at aa 153-175, 179-201 and 208-230" gene complement(2968752..2969210) /locus_tag="CMS_2817" /old_locus_tag="CMS2817" /db_xref="GeneID:6158349" CDS complement(2968752..2969210) /locus_tag="CMS_2817" /old_locus_tag="CMS2817" /codon_start=1 /transl_table=11 /product="putative acetyl transferase" /protein_id="YP_001711450.1" /db_xref="GI:170783116" /db_xref="GeneID:6158349" /translation="MTGIEVRALAASEVGRLEQEEPPGRGFARAMWALQEAGGSTLLV AWDGDRPVGAGQLDLRGDVPELRNLRVDEAERGRGIGTAIMRAAEERVGSGPLAVGVG LDNPRARALYERLGYRGTGENTTTTYAYVDDAGVTRRATETDEMLVRARG" misc_feature complement(2968857..2969084) /locus_tag="CMS_2817" /old_locus_tag="CMS2817" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 5.4e-19" gene complement(2969211..2972753) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /db_xref="GeneID:6158350" CDS complement(2969211..2972753) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /codon_start=1 /transl_table=11 /product="putative bifunctional dehydrogenase" /protein_id="YP_001711451.1" /db_xref="GI:170783117" /db_xref="GeneID:6158350" /translation="MRTWLAEAAQHPADPSAERLAGVLKDENGLDFTIGFVDRVVRPE DLPVAGNSLAALTAKTPGFLPWYMQGAIRAGGILGLVLPQIVVPVARRVLREMVGHLI VDATSEKLGPAIQKLREGGSRLNLNLLGEAVLGEKEAARRLAGTRELLARDDVDYVSI KVSSVVSQLSMWAFDEAVDKVVERLTPLYELASEAATPKFINLDMEEYKDLDLTIEVF TRVLDQPQVKDLEAGIVLQAYLPDALAGLQRLTAWAQERRAAGGAPIKVRIVKGANLA MEQVDGRMHDWPVATWSTKEQTDTHYKRMLEHALQPAAADAVKVGVAGHNLFDVAYAW LLAEERGVTDRIEFEMLLGMATGQAEAVKRTVGGLLLYTPVVHPTEFDVAISYLIRRL EENASQENFMSAVFELSTSAELFAREESRFRASLAGVDDTVPAPNRTQDRRFPPELDD VDPLAEPETPAEPEEEVDPQLTSVVQGFTRGSLLTPDALVDPDASATPFHNAADTDPA LPTNRAWGREILSRVEASQLGVATIEAARIDSTEQLDDIIDGVRTAAARWGARPGDQR AALLHRVGVAIERNRARLIEVMTSETGKTIAEADPEVSEAVDFAHYYAERARELDRVQ GARFVPSRVTVVAPPWNFPVAIPAGSMLAALASGSGVVVKPAGQARRSGAVLVEALRE AGVPRELLALVDAGEAEFGEHLISHPAVDRVILTGGYETAEVFRSWRSDLPLLAETSG KNAIIVTPSADLDLAAADVVKSAFGHAGQKCSAASLVILVGSVGKSRRFLTQLTDAVS SLRVGYPSDPTTQMGPIIEPAAGKLKHALTQLGVGEKWLVEPSQMDETGRLWSPGVRD GVKPGSYFHLTEFFGPVLGVMRARTLEEAIRFQNAIPYGLTAGLHSLDARELEQWLET VEAGNLYVNRGITGAIVQRQPFGGWKRSSVGSGTKAGGPNYLMGLGTWVADAGRHSSS LHLRGLSPRVTELIESAQPAIRYEDFDLVRRSALSDAVAWHDEFGQVKDPSGLGVERN LFRYRPLPVTVRLTESGALADLLRVLAAGRLARAEMHVSVPGILPAGLGQVLDDLPTV HVTIETDDAWLARVAASGIATERVRLVAARSSRLVEARALSDALRGTPDVAVFADEVT AAGRVEMLTFLREQAISITAHRFGNPDDWSEAVI" misc_feature complement(2969877..2971259) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /inference="protein motif:HMMPfam:PF00171" /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase,score 1.9e-46" misc_feature complement(2970429..2970464) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /note="PS00070 Aldehyde dehydrogenases cysteine active site." misc_feature complement(2970525..2970548) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /note="PS00687 Aldehyde dehydrogenases glutamic acid active site." misc_feature complement(2971527..2972543) /locus_tag="CMS_2818" /old_locus_tag="CMS2818" /inference="protein motif:HMMPfam:PF01619" /note="HMMPfam hit to PF01619, Proline dehydrogenase,score 3.4e-35" gene 2973050..2973943 /locus_tag="CMS_2819" /old_locus_tag="CMS2819" /db_xref="GeneID:6158351" CDS 2973050..2973943 /locus_tag="CMS_2819" /old_locus_tag="CMS2819" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_001711452.1" /db_xref="GI:170783118" /db_xref="GeneID:6158351" /translation="MRRLRLLRELKLRGTIGAVADALSFSPSSVSQQLAQLEREAGVP LLRRVGRRVVLTPQAEILVEHTTALLERLERAETEVNASLANVSGTIRVAAFQSALLA LVPPALTILRDDYPDLRVEITMREPESGLHDVWARDHDLVIAEQYPAHAAPRPADLDR EELCVDPLRLGLPPGRDDVRSISDARRLPWVMEPAGTASRHFAEQVCRVAGFEPDVRY VTADLQAHIDLVRGGHAASVLPDLVWAGREPDVRLIGLPGSPRRTVFTSSRVGSLDRP GIRACRDALARAVEDMGPVAG" misc_feature 2973050..2973229 /locus_tag="CMS_2819" /old_locus_tag="CMS2819" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 8.6e-14" misc_feature 2973299..2973919 /locus_tag="CMS_2819" /old_locus_tag="CMS2819" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 5.2e-25" gene complement(2974017..2974865) /locus_tag="CMS_2820" /old_locus_tag="CMS2820" /db_xref="GeneID:6158352" CDS complement(2974017..2974865) /locus_tag="CMS_2820" /old_locus_tag="CMS2820" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711453.1" /db_xref="GI:170783119" /db_xref="GeneID:6158352" /translation="MTPGDRIPTRTGRRPLRRLAAAVAGAALATGALALAGLAQGSGP DGALSASAHNYLVSSSPAAGSTIDAPPSEVTLTFNDVILDLAAAGGAGGDASTGSAPA GGSSVVQVTGPDGQGRHFETGCATDSGRSVTVPVALGGSGQYTVTWRVVSADGHPVSD SIAFTYQAPAGATASAGTADGPGCAAAQEGAAGSGAASSGGTASGGTGGADTSAADPG TAAGQEQGVAPYLGVIVGVGIGIVVLAAAAVVLIVVTGRRKPAAAAATDDADGDTPRD GGPPGA" sig_peptide complement(2974017..2974163) /locus_tag="CMS_2820" /old_locus_tag="CMS2820" /note="Signal peptide predicted for CMS2820 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.373 between residues 49 and 50" misc_feature complement(order(2974104..2974172,2974743..2974811)) /locus_tag="CMS_2820" /old_locus_tag="CMS2820" /note="2 probable transmembrane helices predicted for CMS2820 by TMHMM2.0 at aa 19-41 and 232-254" misc_feature complement(2974365..2974799) /locus_tag="CMS_2820" /old_locus_tag="CMS2820" /inference="protein motif:HMMPfam:PF04234" /note="HMMPfam hit to PF04234, Copper resistance protein CopC, score 5.4e-07" gene complement(2974862..2975626) /locus_tag="CMS_2821" /old_locus_tag="CMS2821" /db_xref="GeneID:6158353" CDS complement(2974862..2975626) /locus_tag="CMS_2821" /old_locus_tag="CMS2821" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711454.1" /db_xref="GI:170783120" /db_xref="GeneID:6158353" /translation="MTTSSPSRPRRRILRSATALIGGVALAVAVPLAASAHVRVSPDQ AAAGSYSTLTFKVPTESATATTTSVTVDLPKDAPFSSLSTEPVPGWTAKVTTEKLDTP VKTDDATITDAPVEVTWTADDGVGIKAGEFQRFTVSVGPVPDTGSIMLPAHQGYSDGS VVDWDQTTPASGEEPEHPAPTLYVDDAPPADSMSAVTTTAAPDATVTTAASDTSATSS AVAVGLGVGGLALGAVALVVAVFALTRARREGGGQA" sig_peptide complement(2974862..2974996) /locus_tag="CMS_2821" /old_locus_tag="CMS2821" /note="Signal peptide predicted for CMS2821 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.322 between residues 45 and 46" misc_feature complement(order(2974898..2974966,2975522..2975590)) /locus_tag="CMS_2821" /old_locus_tag="CMS2821" /note="2 probable transmembrane helices predicted for CMS2821 by TMHMM2.0 at aa 13-35 and 221-243" gene complement(2975800..2976411) /locus_tag="CMS_2822" /old_locus_tag="CMS2822" /db_xref="GeneID:6158354" CDS complement(2975800..2976411) /locus_tag="CMS_2822" /old_locus_tag="CMS2822" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711455.1" /db_xref="GI:170783121" /db_xref="GeneID:6158354" /translation="MIRGLAASTTATFVAALFHEAGGGAAPAWGVVAFGLALASLAAI ALAGTRTALWRLVAAVGVSQLLFHGLFTAAGDATGASVAADPHAGMGHGASALAIPGL DAVPSGAGGAIAPGMLLSHGAALVVTVLALRHGEAAIRALVQATGLRVVLALAIPFLR PEGRRDTALARAVRAPLALRDRCARLGRLRHRGPPRARALAAA" sig_peptide complement(2975800..2975874) /locus_tag="CMS_2822" /old_locus_tag="CMS2822" /note="Signal peptide predicted for CMS2822 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.481 between residues 25 and 26" misc_feature complement(order(2976016..2976084,2976190..2976258, 2976271..2976339)) /locus_tag="CMS_2822" /old_locus_tag="CMS2822" /note="3 probable transmembrane helices predicted for CMS2822 by TMHMM2.0 at aa 25-47, 52-74 and 110-132" gene complement(2976529..2978094) /locus_tag="CMS_2823" /old_locus_tag="CMS2823" /db_xref="GeneID:6158355" CDS complement(2976529..2978094) /locus_tag="CMS_2823" /old_locus_tag="CMS2823" /codon_start=1 /transl_table=11 /product="sugar hydrolase" /protein_id="YP_001711456.1" /db_xref="GI:170783122" /db_xref="GeneID:6158355" /translation="MTKRIRRGLSASAAATLVVASALLAGGSAQAAGTTPPRPTVHTQ EAYAPEDDFTAHWTRADAKQIAKLSDPTAAPRQNSMPEALTMPQVPQDFPSMTDQAYV WDTWPLTDSSGQTYSVDGYDVIFALTAPRTLSFDDRHTYAKIGYFTRPTGIPAEQRPE NGGWTYQGNVFEDGVTDGIFPDQSFSQQAEWSGSARIMADGTVKLFFTDVAFYRDAKG QDVKPADPVISLSQGRVEKVDGAVALKGFETVTPLLRPDGQKYQTNEQNWSTNFRDPF TFTDPDHPGKTYMVFEANVAGKRGEQRCDAADLGYRKGDPAAEDPKEVTASGANYQMA SIGLAVADDADLTKWHYLDPLLESACVTDQTERPEVMIENGKHYLFTISHRSTFANGI DGPEGVYGFVGNGLRSDYKPMNGGSGLVLGNPTNLNYAGGTAYAPDYNQTPGAFQAYS SYILPGGLVESFIDAVGSKESFRRGGTLGPTVRLEFDGDTSELDRGYGKGGLGGYADI PTTRAFDPAHPPQ" sig_peptide complement(2976580..2976621) /locus_tag="CMS_2823" /old_locus_tag="CMS2823" /note="Signal peptide predicted for CMS2823 by SignalP 2.0 HMM (Signal peptide probability 0.948) with cleavage site probability 0.691 between residues 14 and 15" misc_feature complement(2976568..2977959) /locus_tag="CMS_2823" /old_locus_tag="CMS2823" /inference="protein motif:HMMPfam:PF02435" /note="HMMPfam hit to PF02435, Glycoside hydrolase, family 68, score 1.2e-154" gene 2978292..2980001 /locus_tag="CMS_2824" /old_locus_tag="CMS2824" /db_xref="GeneID:6158356" CDS 2978292..2980001 /locus_tag="CMS_2824" /old_locus_tag="CMS2824" /codon_start=1 /transl_table=11 /product="putative sugar hydrolase" /protein_id="YP_001711457.1" /db_xref="GI:170783123" /db_xref="GeneID:6158356" /translation="MHALPLRSATRLPPIAHREETDDMTASPSRPPAAGPARRVRDRV RLLARRHPRALIVIVAILLVAALVVAVRGITGADRGPVTPPPPAPRAADGGIHIRPSG EFMNDPQRPFLLDGVWHAYALVNADHPGGNGSSWRHYTSADMVTWHDEGVAIDKYDTP LGDAETGSVVVDTANTSGLGAGTVIAILTQQSDGVQRQSLYYSTDGGYRFAPYARNPV MDNPGGPDFRDPKVVWDGAHGRWSMALAEGRRIGFYTSPDLIHWTYRSDFARDDLGTM ETPDVFPIASADEPDRVRWVLGVGANGAAQGRGTGYAYWVGDFDGERFTTDDDTPRWL DQGADLYAAVTWADPADGTAPTRRYAMGWTSSWDYADRLPLRDGGAGGGQSLVRELRL VPDGDGWALRSTPLDALAGREGDARPIPDARVDSDAPLADAPDGPSRLRLTLTPDPAD PARETRVRLASPEGGTVTVGFDAARRQAFVVRDDDPDGLMPDAYDRVSTAPLPDAAAG DPVTLDLVLDDRTLEAFVDGDAAVLTSATVGTLAGAGLSVEAVDGATRLTDASWTAFD VGR" misc_feature 2978451..2978519 /locus_tag="CMS_2824" /old_locus_tag="CMS2824" /note="1 probable transmembrane helix predicted for CMS2824 by TMHMM2.0 at aa 54-76" misc_feature 2978580..2979875 /locus_tag="CMS_2824" /old_locus_tag="CMS2824" /inference="protein motif:HMMPfam:PF00251" /note="HMMPfam hit to PF00251, Glycoside hydrolase, family 32, score 2.4e-21" gene complement(2980033..2980500) /locus_tag="CMS_2825" /old_locus_tag="CMS2825" /db_xref="GeneID:6158357" CDS complement(2980033..2980500) /locus_tag="CMS_2825" /old_locus_tag="CMS2825" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711458.1" /db_xref="GI:170783124" /db_xref="GeneID:6158357" /translation="MTTTDPLALESQVCFQAVVAARTVVAVYRPILEPLGLTHTQYLV MLALWERDDRSVSGLGSTLQLEPATLTPLLKRLQAAGFVDRARSSADERIVVVSLTAA GRELRERALDVPAQAAARTGMTVAELEALRDALDDVVGRLTGALADPDDEAAA" misc_feature complement(2980087..2980392) /locus_tag="CMS_2825" /old_locus_tag="CMS2825" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.6e-22" gene complement(2980567..2980977) /locus_tag="CMS_2826" /old_locus_tag="CMS2826" /db_xref="GeneID:6158358" CDS complement(2980567..2980977) /locus_tag="CMS_2826" /old_locus_tag="CMS2826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711459.1" /db_xref="GI:170783125" /db_xref="GeneID:6158358" /translation="MRLSVTDLARSRAFYEGVLGLTPAIESESDPSDAAVREDPAQYF GGVIYGVGSQLLGLRPIADGGVASDGAAFDPAARGLDHVSLQVGSRDDLVRAAALFAE RGISHGEVIDFPTGMSILSVHDPDDINVELVVAG" gene complement(2981133..2982074) /locus_tag="CMS_2827" /old_locus_tag="CMS2827" /db_xref="GeneID:6158359" CDS complement(2981133..2982074) /locus_tag="CMS_2827" /old_locus_tag="CMS2827" /codon_start=1 /transl_table=11 /product="putative aldose epimerase" /protein_id="YP_001711460.1" /db_xref="GI:170783126" /db_xref="GeneID:6158359" /translation="MTYVPRLPTGQQHELTAEVDGRSQRIVIAEVGAALRVLQVDGTD LVQSYPDHARPPFCSGIVLAPWPNRIRDGVWEHGGVTHQLDITEVDRENAIHGLLLHS PYRLVERHDVSITLAADVHPQRGYPFALETSVRYELTGSGVRVTHVIRNVGDADAPVA VGTHPFLRVGDVPTEDLEVVIDAPTHIEVDPVRLNPTGAQTPVDGTRYDLRQGVRVRD AQLDDAWADARVVDGVTRHGVQAPDGRRTEIWADGEFTYWQVFVTPWYPVADGHVWAV AVEPMTAPADAFNSGDGLITLEPGSEWSGTWGIDLHD" misc_feature complement(2981145..2982029) /locus_tag="CMS_2827" /old_locus_tag="CMS2827" /inference="protein motif:HMMPfam:PF01263" /note="HMMPfam hit to PF01263, Aldose 1-epimerase, score 1.3e-37" gene 2982114..2982962 /locus_tag="CMS_2828" /old_locus_tag="CMS2828" /db_xref="GeneID:6158360" CDS 2982114..2982962 /locus_tag="CMS_2828" /old_locus_tag="CMS2828" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711461.1" /db_xref="GI:170783127" /db_xref="GeneID:6158360" /translation="MAPPRSAAMRIPRIVGMARHENEKVRAIREKARIERALDDRRRK RRRLITQFSVAGGLVIVIAAIAGGVYLLGQSQAASAAGPVQDTTAALSTGDQVRIATE PTGVSVGAADAPVTMDVFEDYSCPHCAQYEAETGPLLDRIAATGQVRIVYHPIQIVTK YGVVAGSAAACVLAEEPDKWPAVHSALFDNHSTITDSWTHADFVTWLTTQGVTADAAR TCVAEGRYSSWITSNTSDATSAGVTGTPTLRIQGDIVTTVAGQDLVDALTKAGADLPQ GIAADS" misc_feature 2982267..2982335 /locus_tag="CMS_2828" /old_locus_tag="CMS2828" /note="1 probable transmembrane helix predicted for CMS2828 by TMHMM2.0 at aa 52-74" misc_feature 2982459..2982917 /locus_tag="CMS_2828" /old_locus_tag="CMS2828" /inference="protein motif:HMMPfam:PF01323" /note="HMMPfam hit to PF01323, DSBA oxidoreductase, score 3.5e-06" gene complement(2983027..2983971) /locus_tag="CMS_2829" /old_locus_tag="CMS2829" /db_xref="GeneID:6158361" CDS complement(2983027..2983971) /locus_tag="CMS_2829" /old_locus_tag="CMS2829" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711462.1" /db_xref="GI:170783128" /db_xref="GeneID:6158361" /translation="MTAPDARTTYVPDREVDLRLVLRPLFRGVVDPTCRWDPAPPGSR RVGVWRTARTPLGNASLRLDPRPDGGVDARAWGPGAEWVVDGVPELLGEGDDWSGLDV SAHPLLRDARRRLPALRLMRTNHVFEAMASAVLEQKVTGLEARRAWRQLILAHGEPAP GPVPAGMRVLPSPERWRLIPSWEWHRAGVDPKRSRTLIAVATSAAGLERTLALGRGSE EITRRLRSIPGVGIWTAAETTQRAHGDPDSVSVGDYHVHDMVGWALVGHPVDDDGMLE LLEPWRGHRQRVMRLIEASGFRKPRFGPRMTVQDHRAH" gene 2984099..2985274 /locus_tag="CMS_2830" /old_locus_tag="CMS2830" /db_xref="GeneID:6158362" CDS 2984099..2985274 /locus_tag="CMS_2830" /old_locus_tag="CMS2830" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711463.1" /db_xref="GI:170783129" /db_xref="GeneID:6158362" /translation="MRMDPVTNPYVPGAGRKPAALVGRDRPMERWGIALARLERGTGA QPVVLYGLRGVGKTVLLSEYRRQAVRRDWIVAQVEAGADRSLREALGEALHGPLTDAA RPSAGSRLLKALKTALSFRASYDSSGTWNFGLDLSGVAGGGADTGALETDLRKLVHDI ADGAAEDGVGLAILIDEAQDLSSEETTAMCAIAHAAAQDGWAVVFAFAGLPSLPRVLA EAKSYAERFDYERIEALDDEGALAALTQPAAGEGVRWADEAAALIARESGGYPYFLQQ LGQDTWNAAEGEAIDLVSARVGAATGRASLDTGFFRARWDRATRAEQDYLRALAVDGD SGSASGEVAARLGRPVRSFGPVRASLIAKGLVYAPEHGMVAFTVPGMGAFIERQHVT" misc_feature 2984249..2984272 /locus_tag="CMS_2830" /old_locus_tag="CMS2830" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(2985314..2986021) /locus_tag="CMS_2831" /old_locus_tag="CMS2831" /db_xref="GeneID:6158363" CDS complement(2985314..2986021) /locus_tag="CMS_2831" /old_locus_tag="CMS2831" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711464.1" /db_xref="GI:170783130" /db_xref="GeneID:6158363" /translation="MDPAPDGRSRPASPETGDLDRLARRAHGLVREGARAILAIAGSP GAGKTTLARALVARVDAMAGHGTAAYVPMDGFHLANATLDRLGRHDRKGAIDTFDGWG VLALVRRIRAETDHAVYAPSFDRAVDEGVAGAVAVDPGIRLVVVEGNYLLVDDGPWAL LRAEFDEAWFCATPGDERFARLVERHTAGGRAPSAAAAWARDVDGVNARLIEGTRGRA DLVVDGTAATVRDAADA" misc_feature complement(2985875..2985898) /locus_tag="CMS_2831" /old_locus_tag="CMS2831" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 2986042..2987085 /gene="pfkA" /locus_tag="CMS_2832" /old_locus_tag="CMS2832" /db_xref="GeneID:6158364" CDS 2986042..2987085 /gene="pfkA" /locus_tag="CMS_2832" /old_locus_tag="CMS2832" /EC_number="2.7.1.11" /codon_start=1 /transl_table=11 /product="6-phosphofructokinase" /protein_id="YP_001711465.1" /db_xref="GI:170783131" /db_xref="GeneID:6158364" /translation="MPHDGRVRIGILTSGGDCPGLNAVIRGAVLKGTTIHKQEFVGFR DGWRGVVDGDVMPLARRDIQGIGKQGGTILGTSRTNPFEGDGGVERIQENLDRLGIDA ILAIGGEGTLAAAKRLTDAGLKIVGVPKTVDNDLDATDYTFGFDTAVQIATDAMDRLR TTGDSHSRCMVAEVMGRHVGWIALHSGMAAGAHAILIPEQKTSMDEIIGWVRSAYDRG RAPLVVVAEGFIPEHASDAHGERGLDAFGRPRLGGIGEQIAPIIEERTGIETRATTLG HIQRGGTPSSYDRVLATRLGLAAVDSVRDGHWGRMVALRGTDIVHVGFEEALRRLKTV PQHRYDEAAILFG" misc_feature 2986063..2986956 /gene="pfkA" /locus_tag="CMS_2832" /old_locus_tag="CMS2832" /inference="protein motif:HMMPfam:PF00365" /note="HMMPfam hit to PF00365, Phosphofructokinase, score 2.9e-84" misc_feature 2986852..2986908 /gene="pfkA" /locus_tag="CMS_2832" /old_locus_tag="CMS2832" /note="PS00433 Phosphofructokinase signature." gene 2987151..2988176 /locus_tag="CMS_2833" /old_locus_tag="CMS2833" /db_xref="GeneID:6158859" CDS 2987151..2988176 /locus_tag="CMS_2833" /old_locus_tag="CMS2833" /codon_start=1 /transl_table=11 /product="putative alcohol dehydrogenase" /protein_id="YP_001711466.1" /db_xref="GI:170783132" /db_xref="GeneID:6158859" /translation="MTYRALVAEQTVADDGTTGIEVALRDLPDEQATGGAAGPGDGEV VLDVLFSSVNYKDGMLLGGRPGIARTSPLVAGIDAVGTVAASGSDAFSPGDLVVLNGA GLGESRDGGLAERVRVPADALVRVPDGITAARAAAIGTAGFTAMLSVLALERGGVEPG SGDVLVTGAGGGVGSVAVAILARLGHRVVASTGRVDELGDRLRALGAADVIDRSELGE PGKPLQRIRWAGAVDSVGSATLVNVLAQTRWGGVVTAAGLAQGPDLPGTVLPFILRAV TLAGINSVEAPAALRQEAWARLATDLDPALLDSITTTVPLDGAIAAGERILAGASSGR VVVDVRA" misc_feature 2987193..2988167 /locus_tag="CMS_2833" /old_locus_tag="CMS2833" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 4.3e-33" gene 2988270..2988662 /locus_tag="CMS_2834" /old_locus_tag="CMS2834" /db_xref="GeneID:6158365" CDS 2988270..2988662 /locus_tag="CMS_2834" /old_locus_tag="CMS2834" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711467.1" /db_xref="GI:170783133" /db_xref="GeneID:6158365" /translation="MTAVAATGTIFVALAALLHVFFFLLESVFFERPFAWKRFGVADQ EKALIIKPWAYNQGFYNLFLALGAGLGLILYFVGNVPAGLTLVLFTTACMVLTSIIIA STGKKYLIPALIQGVPPLLGLVFFAAAS" misc_feature order(2988297..2988356,2988444..2988497,2988507..2988575, 2988594..2988653) /locus_tag="CMS_2834" /old_locus_tag="CMS2834" /note="4 probable transmembrane helices predicted for CMS2834 by TMHMM2.0 at aa 10-29, 59-76, 80-102 and 109-128" gene 2988819..2989400 /locus_tag="CMS_2835" /old_locus_tag="CMS2835" /db_xref="GeneID:6158366" CDS 2988819..2989400 /locus_tag="CMS_2835" /old_locus_tag="CMS2835" /codon_start=1 /transl_table=11 /product="putative heme oxygenase" /protein_id="YP_001711468.1" /db_xref="GI:170783134" /db_xref="GeneID:6158366" /translation="MTALVTGRGCRDDYVALVAQHYFIYRAIEQATERMAADPVAARF ISTRLTRLPAIEADLDFLVGPDWRDIVRPLASTAAYVERIEQVASVWVGGFIAHHYTR YLGDLSGGRLLRSLLQRQFGFDTNGVGLYLFAEIAEPRRFCSTYREALDQAPWDDDER ARVVAEVENAYRLTTDVFAELARGRATAPLSLA" misc_feature 2988819..2989358 /locus_tag="CMS_2835" /old_locus_tag="CMS2835" /inference="protein motif:HMMPfam:PF01126" /note="HMMPfam hit to PF01126, Heme oxygenase, score 6.7e-42" gene 2989582..2990331 /locus_tag="CMS_2836" /old_locus_tag="CMS2836" /db_xref="GeneID:6158367" CDS 2989582..2990331 /locus_tag="CMS_2836" /old_locus_tag="CMS2836" /codon_start=1 /transl_table=11 /product="putative DNA/RNA non-specific endonuclease" /protein_id="YP_001711469.1" /db_xref="GI:170783135" /db_xref="GeneID:6158367" /translation="MRLDYLHFTVLMDTDRRLAALTAVNIDGARLVDVERSDDWHLDP RLPEEQQCGPELYARNDIDRGHLVRRRDPVWGDIAEAARASADTFVYTNAAPQAAEFN QSKELWLGLEDYVLENADLGDRRMTVLTGPVFSDDDPVYRGVRIPLMFWKIAAWASGD RLATTAYLLDQAPELGDLDRQSATADAPELGPYRTYQVAVAEIGALTGYDVAQLAAAD RLGVPATARPGTPEDGRDGWVELERFAAITL" misc_feature 2989591..2990235 /locus_tag="CMS_2836" /old_locus_tag="CMS2836" /inference="protein motif:HMMPfam:PF01223" /note="HMMPfam hit to PF01223, DNA/RNA non-specific endonuclease, score 2e-53" gene 2990450..2991289 /locus_tag="CMS_2837" /old_locus_tag="CMS2837" /db_xref="GeneID:6158368" CDS 2990450..2991289 /locus_tag="CMS_2837" /old_locus_tag="CMS2837" /note="good secretion signal" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001711470.1" /db_xref="GI:170783136" /db_xref="GeneID:6158368" /translation="MIPARSKRLALAMLLTAFVTPSVVGGAASDASAQISPLRLQRPV MAGTKIRSASGANCTAGAVMKYSGIGTAISGFAAAKRYVLTSEHCGKKGEKFTLGSTV TGTVTWVSPDTDLELITVLPTSRTSRYCGPSHSGTLFCQNVTTYTPQADGRVVLSALN TGSPITPIVNRTGSPGDEESFCRSGAVGGVDCTLMLTHIPSPVLAGLPGVASASPTSR RASEDGDSGAPVTSGSGGFTNVALYGILYGGGWYGGVWKNHYITIAKFFEETSGYSLA PAL" sig_peptide 2990450..2990548 /locus_tag="CMS_2837" /old_locus_tag="CMS2837" /note="Signal peptide predicted for CMS2837 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.908 between residues 33 and 34" gene complement(2991338..2992705) /gene="hemL" /locus_tag="CMS_2838" /old_locus_tag="CMS2838" /db_xref="GeneID:6158369" CDS complement(2991338..2992705) /gene="hemL" /locus_tag="CMS_2838" /old_locus_tag="CMS2838" /EC_number="5.4.3.8" /note="Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase" /protein_id="YP_001711471.1" /db_xref="GI:170783137" /db_xref="GeneID:6158369" /translation="MTHSQDLFDRARDVIPGGVNSPVRAFGSVGGTPRMMVRAAGPYV TDADGVEYVDLVNSWGPAILGHARPEVVKAVQDAAALGLGFGATTPAETELAELVTER VRVAGVDGSPDRRPVEKLRLVSTGTEATMTAIRLARGFTGRDLLVKFAGHYHGHSDSL LAEAGSGVATLALPGSAGIPEAIAAQTIVVPYNDLGAVRAVFAEHGPRIAAVITEAAA ANMGVVPPLPGFTAELARIAHDNGSLLISDEVLTGFRVHPAGYWGLDNDGLAADHPDA WTPDLVTYGKVIGGGLPVAALGGRADVMDHLAPLGPVYQAGTLSGNPVAVAAGLTTLR LADADVYRALDIAADILIYAVELAFDRAGLAYSVQRAGSLFSFTFGTPPEHGITDYAT VQAQETWRYPAFFHSMLDQGVSLPPSVFEAWFVSAAMDEASLDRVIRALPAAARAAAA ATPPA" misc_feature complement(2991359..2992639) /gene="hemL" /locus_tag="CMS_2838" /old_locus_tag="CMS2838" /inference="protein motif:HMMPfam:PF00202" /note="HMMPfam hit to PF00202, Aminotransferase class-III,score 2.7e-74" gene complement(2992786..2993766) /gene="hemB" /locus_tag="CMS_2839" /old_locus_tag="CMS2839" /db_xref="GeneID:6158746" CDS complement(2992786..2993766) /gene="hemB" /locus_tag="CMS_2839" /old_locus_tag="CMS2839" /note="catalyzes the formation of porphobilinogen from 5-aminolevulinate" /codon_start=1 /transl_table=11 /product="delta-aminolevulinic acid dehydratase" /protein_id="YP_001711472.1" /db_xref="GI:170783138" /db_xref="GeneID:6158746" /translation="MTSPYYRPRRLRTTPAMRRLTAETRLHAADLVLPMFVREGLTEA SPITSMPGVSQHSLDSLRRALVEAAEAGIGGVMLFGVPEVRDAEGSGASDPDGILNVA TRVAIEEFGDALVVQTDLCLDEFTDHGHCGVLDADGVVDNDRSLDRYRAMGLAQAEAG SHLLGLSGMMDGQVGAVREALDDAGHHDVAILAYAAKYASAFYGPFREAVDSQLQGDR RTYQMDNGNRREALREVELDIEEGADVVMVKPAMSYLDILADVAATSSVPVWAYQISG EYAMIEAAAQNGWIDRERAIDESVLGIKRAGADAILTYWAVELAERLARR" misc_feature complement(2992798..2993760) /gene="hemB" /locus_tag="CMS_2839" /old_locus_tag="CMS2839" /inference="protein motif:HMMPfam:PF00490" /note="HMMPfam hit to PF00490, Delta-aminolevulinic acid dehydratase, score 2.6e-187" misc_feature complement(2993005..2993043) /gene="hemB" /locus_tag="CMS_2839" /old_locus_tag="CMS2839" /note="PS00169 Delta-aminolevulinic acid dehydratase active site." gene complement(2993763..2994602) /locus_tag="CMS_2840" /old_locus_tag="CMS2840" /db_xref="GeneID:6158742" CDS complement(2993763..2994602) /locus_tag="CMS_2840" /old_locus_tag="CMS2840" /codon_start=1 /transl_table=11 /product="putative uroporphyrin-III c-methyltransferase/uroporphyrinogen-III synthase" /protein_id="YP_001711473.1" /db_xref="GI:170783139" /db_xref="GeneID:6158742" /translation="MTSTDQKPLKGWRVLVPRGGPWGDGVAYDLRAQGATPVVAPMIN FAATQDAQALESALADLAAGSFDWLTVTSATTVDVLASHRAVVPEGTRIAAVGETTAA ALVAAGYTVDFVPSIDSSATALLEEWTEMAAGSPRRRVLTLRSEIAKPTLTDGLIARG HDVRSVVAYRTVGVPVSDRIREDVSSGRVRAILVTSGSVAEQVHEQLGDVPDGVLIAC IGPRTAKDARRFGVRVDVVATERSAASLIQSLVEIARHEEPRPDTAGLTGLADLLDRS TTE" misc_feature complement(2993856..2994542) /locus_tag="CMS_2840" /old_locus_tag="CMS2840" /inference="protein motif:HMMPfam:PF02602" /note="HMMPfam hit to PF02602, Uroporphyrinogen III synthase HEM4, score 5.7e-27" gene complement(2994599..2995585) /gene="hemC" /locus_tag="CMS_2841" /old_locus_tag="CMS2841" /db_xref="GeneID:6158370" CDS complement(2994599..2995585) /gene="hemC" /locus_tag="CMS_2841" /old_locus_tag="CMS2841" /EC_number="2.5.1.61" /note="transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis" /codon_start=1 /transl_table=11 /product="porphobilinogen deaminase" /protein_id="YP_001711474.1" /db_xref="GI:170783140" /db_xref="GeneID:6158370" /translation="MTDGPTTSAPTTTLRIGTRGSALALAQTRAIAAEITGASGLEVE LVPVTTHGDTSRESLSSLGGTGVFASALRESLLRGECDLVVHSLKDLPTAPYAGLTVA SVPVREDPRDVLCARDGLTLATLPRGARVGTGSPRRRAQILAERPDLDVVDIRGNIDT RLSRVTAGDLDAVVLAAAGLERIDRIGAATEHLELDRWPTAPGQGALALEIRTEDAET HSVVGRAVEAVDDPFTHAAVLAERGVLAALEAGCAAPIGAWATVTSARLALTAVVYRP DGTQRMAASHELDTAGLDLAQLGASASALSGPVSRELLDAGAADLAPLGGTR" misc_feature complement(2994689..2994883) /gene="hemC" /locus_tag="CMS_2841" /old_locus_tag="CMS2841" /inference="protein motif:HMMPfam:PF03900" /note="HMMPfam hit to PF03900, Porphobilinogen deaminase,score 7.7e-06" misc_feature complement(2994704..2994736) /gene="hemC" /locus_tag="CMS_2841" /old_locus_tag="CMS2841" /note="PS00639 Eukaryotic thiol (cysteine) proteases histidine active site." misc_feature complement(2994917..2995549) /gene="hemC" /locus_tag="CMS_2841" /old_locus_tag="CMS2841" /inference="protein motif:HMMPfam:PF01379" /note="HMMPfam hit to PF01379, Porphobilinogen deaminase,score 7.9e-76" gene complement(2995582..2996736) /gene="hemH" /locus_tag="CMS_2842" /old_locus_tag="CMS2842" /db_xref="GeneID:6158743" CDS complement(2995582..2996736) /gene="hemH" /locus_tag="CMS_2842" /old_locus_tag="CMS2842" /EC_number="4.99.1.1" /note="protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="YP_001711475.1" /db_xref="GI:170783141" /db_xref="GeneID:6158743" /translation="MGPAHVEEPVAYDAILLASFGGPEGQDDVIPFLRNVTAGRGIPE ERLEEVAHHYRAFGGISPINEQNRELKAALEARLAERGIDLPVLWGNRNWGPYLNDAL REAEEKGYRQLIAVATSAYSSYSSCRQYREDFADALEDTQLQGVIRIDKVRQFFDHPG FVTPFIEGTRDGIRDVIAHFEAEGKPVDLATDVEILFSTHSIPSSDASKSGPAERGFD QDGAYAAQHLAVAEVVMHEVRKELGIDQDVPWQLVYQSRSGPPSMPWLEPDVNDAIGE LPAQGRRAVVIVPLGFVSDHMEVKWDLDNEATESAAENGLYSVRVPTPGVHAAYVDGL IDLVLERRDGMKAADRPHMTDLGPWYDVCRPGCCENVRLGFKPAVSGLAP" misc_feature complement(2995711..2996703) /gene="hemH" /locus_tag="CMS_2842" /old_locus_tag="CMS2842" /inference="protein motif:HMMPfam:PF00762" /note="HMMPfam hit to PF00762, Ferrochelatase, score 3.1e-97" gene complement(2996832..2998292) /locus_tag="CMS_2843" /old_locus_tag="CMS2843" /db_xref="GeneID:6158745" CDS complement(2996832..2998292) /locus_tag="CMS_2843" /old_locus_tag="CMS2843" /note="Weak but full length match to Q6AB01_PROAC" /codon_start=1 /transl_table=11 /product="putative heme synthetase" /protein_id="YP_001711476.1" /db_xref="GI:170783142" /db_xref="GeneID:6158745" /translation="MRATAADVPRAHHRRERDHGHRPRLARPHPPGARRLRRPPRRRH RLDRPDARRRVGRARARGARHRGAAVGAAPPRRPHRADRPGADPRARRRPRGRVGPLL PRGARGMGGRRPGASRGAVDGPCARPRVPPRAALGRRDPRLGPRARGRRRRAHRRRAR ARHMDGVRPAEGHARGQRPVRVARAGRRGRAPAGPPARAHRPRRPVGGRDDLTAARPM RGGVAARRTMGIMSIPAAESAASQVPPIESPGEARPDDGSTPEASPSGYALWAVLRRD PARPDDLDGREVPGAVDELDGIVHIVEAEGVTVRGFYDVSGMRADADLMVWIHGPQME TLQWAFREIRRARLIRALIPSWSAAGVHRDAEFNRSHVPGFLRGIEPRDWLCVYPFVR SYEWYLLPPEERGRMLAQHGRQGAAFRSVIANTVSSFGLGDYEWILPLESNELVDLVD MMRDLRNTDARRHVREEVPFYTGRRISTAELVEVLQ" misc_feature complement(2996874..2997437) /locus_tag="CMS_2843" /old_locus_tag="CMS2843" /inference="protein motif:HMMPfam:PF06778" /note="HMMPfam hit to PF06778, Chlorite dismutase, score 4.5e-67" gene complement(2998324..2999961) /locus_tag="CMS_2844" /old_locus_tag="CMS2844" /db_xref="GeneID:6158371" CDS complement(2998324..2999961) /locus_tag="CMS_2844" /old_locus_tag="CMS2844" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711477.1" /db_xref="GI:170783143" /db_xref="GeneID:6158371" /translation="MAEGGSVRARRREAREPGSLGAHPLMLPGLVGLAGSLILLAASF IVGHAPAESELSRTPVIGALRVSPLATSIASLAVVVGGLMLTSAWLLLGALLPRLGQA GLRATLRLAVVWTVPLLFSAPLFSRDIYSYIAQGRVLGAGLSPYEHGPAVLPDWRSTG VDPLWAHNPAPYGPLFLAIERVIGGIDDALGVEVAVLAARGVAVAGVVLMVVCGLRIA RRRRIDPVRTAWFLAASPLVVFNFVMAAHNDALMMGLLVAGLLAAIDSRPVLGVVLVT CAVAVKPIALLALPIVAIVHAEMRARRVDDRAPEGVAVDGSAGGVPGLRPPTRDPRVW AAWTVSGIAAMGLLALGGQLLGVGLGWISALSSPVSVVSWFMPFGVAAGAFGPLVEAL GGPGGAVEGGIKTAGILLGFAGAAWCILTTRTLSGEARLALAFACVVAMSPVVYPWYG LWVLVILAVVGIADGAAMSLAVSATVFLVGVNLLEPMAVVHSVASGWPRLLVVVVAVV GILGVLAPGLQGLAGTDPFRALRAPRHQFSAARQPPV" misc_feature complement(order(2998396..2998464,2998492..2998560, 2998579..2998647,2998690..2998749,2998786..2998854, 2998897..2998965,2999080..2999148,2999206..2999274, 2999308..2999376,2999587..2999640,2999677..2999745, 2999836..2999904)) /locus_tag="CMS_2844" /old_locus_tag="CMS2844" /note="12 probable transmembrane helices predicted for CMS2844 by TMHMM2.0 at aa 20-42, 73-95, 108-125, 196-218,230-252, 272-294, 333-355, 370-392, 405-424, 439-461,468-490 and 500-522" misc_feature complement(2998441..2998485) /locus_tag="CMS_2844" /old_locus_tag="CMS2844" /note="PS00211 ABC transporters family signature." gene complement(2999983..3000258) /locus_tag="CMS_2845" /old_locus_tag="CMS2845" /db_xref="GeneID:6158372" CDS complement(2999983..3000258) /locus_tag="CMS_2845" /old_locus_tag="CMS2845" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711478.1" /db_xref="GI:170783144" /db_xref="GeneID:6158372" /translation="MTTDRPRPTGPRSRAELKLDIQHTREEISATLDALEAKLNVRRR AKDGIADLRRRIRRTADEDPLLLVAVGVGAVVVVGGVVWAVARAARR" misc_feature complement(3000001..3000069) /locus_tag="CMS_2845" /old_locus_tag="CMS2845" /note="1 probable transmembrane helix predicted for CMS2845 by TMHMM2.0 at aa 64-86" gene complement(3000248..3000664) /locus_tag="CMS_2846" /old_locus_tag="CMS2846" /db_xref="GeneID:6158373" CDS complement(3000248..3000664) /locus_tag="CMS_2846" /old_locus_tag="CMS2846" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711479.1" /db_xref="GI:170783145" /db_xref="GeneID:6158373" /translation="MTDQDLNPKSKRSLVRLVADLPTLIVQLIKDEIESFKNELVTKL KHAGIGAGFLVVALFFAFIAFLVLVAAAILGLSEAFSPWLSALIVAGVFLLITVVLAL LGMRWIKKGVPPTPEETVDSLKEDVDAVKGTGKYDH" misc_feature complement(3000263..3000640) /locus_tag="CMS_2846" /old_locus_tag="CMS2846" /inference="protein motif:HMMPfam:PF07332" /note="HMMPfam hit to PF07332, Protein of unknown function DUF1469, score 1.1e-13" misc_feature complement(order(3000350..3000418,3000446..3000514)) /locus_tag="CMS_2846" /old_locus_tag="CMS2846" /note="2 probable transmembrane helices predicted for CMS2846 by TMHMM2.0 at aa 51-73 and 83-105" gene complement(3000697..3001038) /locus_tag="CMS_2847" /old_locus_tag="CMS2847" /db_xref="GeneID:6158374" CDS complement(3000697..3001038) /locus_tag="CMS_2847" /old_locus_tag="CMS2847" /note="no signal sequence detected by Prosite" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711480.1" /db_xref="GI:170783146" /db_xref="GeneID:6158374" /translation="MKGKLLFVAGAGVGYVLGARAGRKRYEQIRTNAKKVWDDPKVQR QVDNAAGFVKDHTPDVAHAVVGGAKKVVGTVTGGKKDSASGSTPSSASGTHYPTMDPA SPEPNGSGTSR" sig_peptide complement(3000697..3000765) /locus_tag="CMS_2847" /old_locus_tag="CMS2847" /note="Signal peptide predicted for CMS2847 by SignalP 2.0 HMM (Signal peptide probability 0.636) with cleavage site probability 0.296 between residues 23 and 24" misc_feature complement(3000973..3001026) /locus_tag="CMS_2847" /old_locus_tag="CMS2847" /note="1 probable transmembrane helix predicted for CMS2847 by TMHMM2.0 at aa 5-22" gene complement(3001166..3002551) /gene="hemY" /locus_tag="CMS_2848" /old_locus_tag="CMS2848" /db_xref="GeneID:6158375" CDS complement(3001166..3002551) /gene="hemY" /locus_tag="CMS_2848" /old_locus_tag="CMS2848" /EC_number="1.3.3.4" /codon_start=1 /transl_table=11 /product="protoporphyrinogen oxidase" /protein_id="YP_001711481.1" /db_xref="GI:170783147" /db_xref="GeneID:6158375" /translation="MVGGGVGGLIAARACALAGERVILVEASPALGGTVGSHVVDGLR LDSGAESFATRRSTVAAFLGELGLADRIVQPNPDGAWVQLAERAIQLPRTGLLGIPAH PFDATIATAIGRAGVARAKADLLLPAVVGAKERTLGGLVRARMGDRVVDRLVAPIVSG VHSAHPDEVDADSVAPGLHAGLAEHGSLGRAVASMRAASPAGSAVSGIVGGVHLLVDA LVADLARLGVDVRTSLAVESVHRHRSHEGASASDDWHVELADGRGIDAAGVVLAIPAA GLTRLFSGLAPRAVTEGWPEPSSVELVTLVVRAPELDAAPRGTGVLVAADAPGIRAKA LTHATAKWPWLKAAAGDRHVLRLSYGRAGGDDDTAGVPDDELTAIAVRDASGLLGVDL AGRVTGSARVRWTNALPFAASGHRERVQAVRDEAAEHPGLEITGSAVAGTGLASVVAD AQAAAARLLAR" misc_feature complement(3001175..3002536) /gene="hemY" /locus_tag="CMS_2848" /old_locus_tag="CMS2848" /inference="protein motif:HMMPfam:PF01593" /note="HMMPfam hit to PF01593, Amine oxidase, score 1.6e-08" gene complement(3002598..3003707) /gene="hemE" /locus_tag="CMS_2849" /old_locus_tag="CMS2849" /db_xref="GeneID:6158748" CDS complement(3002598..3003707) /gene="hemE" /locus_tag="CMS_2849" /old_locus_tag="CMS2849" /EC_number="4.1.1.37" /note="catalyzes the formation of coproporphyrinogen from uroporphyrinogen III" /codon_start=1 /transl_table=11 /product="uroporphyrinogen decarboxylase" /protein_id="YP_001711482.1" /db_xref="GI:170783148" /db_xref="GeneID:6158748" /translation="MITPSSSSSLASAALPLPAEHPLNTRTSSSLLVEAYRGHRGERA PVWFMRQAGRSLPEYRELRVGTRMLDACLDPEMASEITLQPVRRHHVDAGIFFSDIVI PLKLAGVGVDIVAGRGPVLEKPVRTAADVAALPSLDPAALEPIRQAVARTAAELGDTP LIGFAGAPFTLAAYLVEGGPSKDHIAARGLMHADPDAWDALMRWCAEITGVFLHAQVM AGASAAQLFDSWAGGLSLADYTQRVAPASALALDHVRTITAADGRTVPLVHFGVGTGE LLGAMHDVGVDAVGVDWRIPLDEASRRLGGSVPVQGNIDPALLAAPWPILEAHVRDVL ERGKTAPAHVLNLGHGVPPETDPTVLTRIVDLVRE" misc_feature complement(3002601..3003629) /gene="hemE" /locus_tag="CMS_2849" /old_locus_tag="CMS2849" /inference="protein motif:HMMPfam:PF01208" /note="HMMPfam hit to PF01208, Uroporphyrinogen decarboxylase (URO-D), score 2.6e-131" misc_feature complement(3003174..3003221) /gene="hemE" /locus_tag="CMS_2849" /old_locus_tag="CMS2849" /note="PS00907 Uroporphyrinogen decarboxylase signature 2." misc_feature complement(3003546..3003575) /gene="hemE" /locus_tag="CMS_2849" /old_locus_tag="CMS2849" /note="PS00906 Uroporphyrinogen decarboxylase signature 1." gene 3003824..3005143 /gene="hemA" /locus_tag="CMS_2850" /old_locus_tag="CMS2850" /db_xref="GeneID:6158744" CDS 3003824..3005143 /gene="hemA" /locus_tag="CMS_2850" /old_locus_tag="CMS2850" /EC_number="1.2.1.70" /note="catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA reductase" /protein_id="YP_001711483.1" /db_xref="GI:170783149" /db_xref="GeneID:6158744" /translation="MLICLTASHHNASFEVLEKLSVAAPSVAGTLMEQNDFIAGAVVL ATCNRFEAYLDVEEPLTAARALAVEATVDVVSGASGIARDDVRGSVDVKCGDAVAEHL FAVSSGLESVVVGEGEIAGQVRRALEGARTGGTTSTGLERLFQTASNTSRGVKTRTGL QSAGRSMVRLALDLAESRIADWSATRVLLVGTGAYAGASLAALRDRGVVDVHVYSPSG RAQKFAGPHGIPAVEGRDLLKALAASDMVVTCSTAPTAVLAAHHMQGAAAVSGDGRRR LVIDLGLPRNVDPDVVTVEGVELLDLETISLHAPLRDLTATDDAREIVSTAAAEFRAA SAEDEVAPAVVALRTHIFDVLEGELERVRKRGDSSEATEKALRHLVSVLVHKPSVRAR ELARQGEGARVVDAVQALFGLDVEMPAAVSSPVAVALPRTAEAGQAS" misc_feature 3003917..3004300 /gene="hemA" /locus_tag="CMS_2850" /old_locus_tag="CMS2850" /inference="protein motif:HMMPfam:PF05201" /note="HMMPfam hit to PF05201, Glutamyl-tRNA reductase,score 5e-19" misc_feature 3004310..3004762 /gene="hemA" /locus_tag="CMS_2850" /old_locus_tag="CMS2850" /inference="protein motif:HMMPfam:PF05200" /note="HMMPfam hit to PF05200, Glutamyl-tRNA reductase,score 1.2e-11" misc_feature 3004775..3005065 /gene="hemA" /locus_tag="CMS_2850" /old_locus_tag="CMS2850" /inference="protein motif:HMMPfam:PF00745" /note="HMMPfam hit to PF00745, Glutamyl-tRNA reductase,score 4e-07" gene 3005140..3005775 /locus_tag="CMS_2851" /old_locus_tag="CMS2851" /db_xref="GeneID:6158741" CDS 3005140..3005775 /locus_tag="CMS_2851" /old_locus_tag="CMS2851" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711484.1" /db_xref="GI:170783150" /db_xref="GeneID:6158741" /translation="MRPRILRGPRLDAPLRMSEPVRTERLVIRPYTADDLDDYADIQR RPDVVEYMFWPLRDREASKRHLAARCRKTRLEQSNDFLGLAVELPDEPSLNPRAGSGR VVGDVSLLLRNAASRQLEIGWVMNPDFAGRGYATEASRAMLDIAFQRAGAHRVLAQLD ARNTSSARMAERLGMRREGHFREEHLVKGEWVDSLYYAVLADEWATPPAAT" misc_feature 3005425..3005667 /locus_tag="CMS_2851" /old_locus_tag="CMS2851" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 6e-06" gene 3005790..3006395 /locus_tag="CMS_2852" /old_locus_tag="CMS2852" /db_xref="GeneID:6158376" CDS 3005790..3006395 /locus_tag="CMS_2852" /old_locus_tag="CMS2852" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711485.1" /db_xref="GI:170783151" /db_xref="GeneID:6158376" /translation="MDGDLPALDPFEVRGPVRTARLVLRPFTPDDVVALDAYAASPGA RPHLAGSSSDPARMLGDRLGWTRLADVGDRLALAIELPAQGQRWARVVGEVHLLLRDP GARQAELGVVVHEDVRGAGLATEAADRILELAFAEVGVHRVACRVNAADSAALGLAER LGMRREALLVHDRWARGAWADTVVVALLDVEWAARQSLDGL" misc_feature 3006045..3006281 /locus_tag="CMS_2852" /old_locus_tag="CMS2852" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 1.6e-07" gene 3006405..3007001 /locus_tag="CMS_2853" /old_locus_tag="CMS2853" /db_xref="GeneID:6158377" CDS 3006405..3007001 /locus_tag="CMS_2853" /old_locus_tag="CMS2853" /codon_start=1 /transl_table=11 /product="putative NUDIX hydrolase" /protein_id="YP_001711486.1" /db_xref="GI:170783152" /db_xref="GeneID:6158377" /translation="MTSTPDPAGRPVVPVLDDDDDDDLDELDELDGGGPGGSAARRRD PDERPLRVAALALIRDRHVLMVRVEGQDVLYLPGGKIEPGEGARQALVREAAEEVGLE IDPASIEDLFTVLADAHGAHAGRLVSMTVYRAEPRDGTRQQPVPSGEVAEVELVTSAD SDRCPPAGQAALDVLGHDVGDTRAAGVSPWLEWIRSVL" misc_feature 3006549..3006935 /locus_tag="CMS_2853" /old_locus_tag="CMS2853" /inference="protein motif:HMMPfam:PF00293" /note="HMMPfam hit to PF00293, NUDIX hydrolase, score 9.1e-20" gene complement(3006932..3007894) /locus_tag="CMS_2854" /old_locus_tag="CMS2854" /db_xref="GeneID:6158378" CDS complement(3006932..3007894) /locus_tag="CMS_2854" /old_locus_tag="CMS2854" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711487.1" /db_xref="GI:170783153" /db_xref="GeneID:6158378" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(3006944..3007486) /locus_tag="CMS_2854" /old_locus_tag="CMS2854" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(3007992..3009110) /gene="add" /locus_tag="CMS_2855" /old_locus_tag="CMS2855" /db_xref="GeneID:6158379" CDS complement(3007992..3009110) /gene="add" /locus_tag="CMS_2855" /old_locus_tag="CMS2855" /EC_number="3.5.4.4" /note="catalyzes the formation of inosine from adenosine" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="YP_001711488.1" /db_xref="GI:170783154" /db_xref="GeneID:6158379" /translation="MTIAPEDSTLPGGGSFRDLPKVSLHDHLDGGLRSGTIVEIADEI GLELPAQGAEALGEWFRTSADSGSLVDYLKTFDVTIAVMQTEQQLARVAREFVEDLAD DGVVYGEIRWAPEQHLTKGLSLDQAVEAVQSGIEEAVRGVEEAGGSIRVGQLVSAMRH LDRGTEIAELAIRHRDRGVVGFDIAGPEAGFPPSRMQGAFDLLAREWMPRTVHAGEAD GLESIRGALLDGRALRLGHGVRIAEDIEIDSEEGEEVFVTLGTLAQWIKDRGIPLELS PSSNLQTGAIEVWGDEMVDHPFDLLYQLGFAVTVNTDNRLMSGTSISRELSLLTDAFA YDLDDHEMFQLNAAAAAFLPLEEREALAEIISDGFARL" misc_feature complement(3008019..3009059) /gene="add" /locus_tag="CMS_2855" /old_locus_tag="CMS2855" /inference="protein motif:HMMPfam:PF00962" /note="HMMPfam hit to PF00962, Adenosine/AMP deaminase,score 5.4e-64" gene 3009213..3010148 /locus_tag="CMS_2856" /old_locus_tag="CMS2856" /db_xref="GeneID:6158592" CDS 3009213..3010148 /locus_tag="CMS_2856" /old_locus_tag="CMS2856" /codon_start=1 /transl_table=11 /product="putative nucleoside hydrolase" /protein_id="YP_001711489.1" /db_xref="GI:170783155" /db_xref="GeneID:6158592" /translation="MPTKILIDCDPGHDDALALMLAHGSPEVEVVGITTVAGNQTLEK VTRNALAVATVAGMQGVPIAAGCARPLVRPVMTAPEIHGETGLDGPELPEPAVALDPR HAVDLIIETVMAHAPGEITLVPLGALTNIALAVRREPRIVERVKEVVLMGGGYHHGNR TAVAEFNIAVDPEAAHIVFGEAWPVTMVGLDLTYQATATPEVMARIAALGTPASRFVV DSMESYGRAYHDRQDFPSPPVHDPCAVARVIDPRLVSARRAPVSVELTGTHTTGMTVT DLRRPAPADCTTQVAVDLDHAGFWDVVVDALERIG" misc_feature 3009216..3010145 /locus_tag="CMS_2856" /old_locus_tag="CMS2856" /inference="protein motif:HMMPfam:PF01156" /note="HMMPfam hit to PF01156, Inosine/uridine-preferring nucleoside hydrolase, score 6.1e-147" gene complement(3010198..3011496) /gene="deoA" /locus_tag="CMS_2857" /old_locus_tag="CMS2857" /db_xref="GeneID:6158380" CDS complement(3010198..3011496) /gene="deoA" /locus_tag="CMS_2857" /old_locus_tag="CMS2857" /EC_number="2.4.2.4" /note="Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate" /codon_start=1 /transl_table=11 /product="thymidine phosphorylase" /protein_id="YP_001711490.1" /db_xref="GI:170783156" /db_xref="GeneID:6158380" /translation="MSAAFDVVDLIRTKRDGGRLSTAEIDWLVAAYTDRYVADEQMAA LAMAILLRGMDRTEIRDLTLAMIASGETLDFSRLGKPTVDKHSTGGVGDKITLPLMPL VASYGVAVPQLSGRGLGHTGGTLDKLESIPGWRADLSTEEMVRQMRDHGGVICAAGSG LAPADKRLYALRDTTGTVEAIPLIASSIMSKKIAEGTGALVLDVKFGSGAFMTDIDRS RELARTMVELGTDAGVRTTALLTDMDVPLGLAIGNANEVRESLEVLAGGGPADVVELT LALAREMLAAVGIPDADVDVALRDGRAMDSWRATVRAQGGDPDAAMPVARETHVVTAE RDGVLVQQDALPFGIAAWRLGTGRARQGDAVQHAAGVDLHAKPGDAVRRGDPLFTLST DEPERFARALESLEGAYRVGDAEEHVARGPLVRERITAEG" misc_feature complement(3010519..3011262) /gene="deoA" /locus_tag="CMS_2857" /old_locus_tag="CMS2857" /inference="protein motif:HMMPfam:PF00591" /note="HMMPfam hit to PF00591, Glycosyl transferase,family 3, score 1.1e-35" misc_feature complement(3011110..3011157) /gene="deoA" /locus_tag="CMS_2857" /old_locus_tag="CMS2857" /note="PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature." misc_feature complement(3011284..3011478) /gene="deoA" /locus_tag="CMS_2857" /old_locus_tag="CMS2857" /inference="protein motif:HMMPfam:PF02885" /note="HMMPfam hit to PF02885, Glycosyl transferase,family 3, score 1e-11" gene complement(3011493..3011924) /locus_tag="CMS_2858" /old_locus_tag="CMS2858" /db_xref="GeneID:6158661" CDS complement(3011493..3011924) /locus_tag="CMS_2858" /old_locus_tag="CMS2858" /EC_number="3.5.4.5" /note="Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis" /codon_start=1 /transl_table=11 /product="cytidine deaminase" /protein_id="YP_001711491.1" /db_xref="GI:170783157" /db_xref="GeneID:6158661" /translation="MSAVEPVESGGIDWGSLREAAHEAMGRAYVPYSKFPVGVAAIAT DGRVITGCNVENASYGLTLCAECALVSVLHLTGGGQLMAFTCVDGDGNILMPCGRCRQ LLFEHAVPGMLLETVSGIRTIDEVLPDAFGPSTLDAYGDRS" misc_feature complement(3011577..3011891) /locus_tag="CMS_2858" /old_locus_tag="CMS2858" /inference="protein motif:HMMPfam:PF00383" /note="HMMPfam hit to PF00383, Cytidine/deoxycytidylate deaminase, zinc-binding region, score 1.4e-16" misc_feature complement(3011613..3011735) /locus_tag="CMS_2858" /old_locus_tag="CMS2858" /note="PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature." gene complement(3011921..3013222) /locus_tag="CMS_2859" /old_locus_tag="CMS2859" /db_xref="GeneID:6158381" CDS complement(3011921..3013222) /locus_tag="CMS_2859" /old_locus_tag="CMS2859" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711492.1" /db_xref="GI:170783158" /db_xref="GeneID:6158381" /translation="MTATTPAAHAPVPHVPAAAALERAVATSWKAPVAFGVFTVISLV LFVLLGREGSSTFGLSTGTDLIQLAPLVLPTAATGVVVTVVLAALTVVSVLMVRRSAK VPLWFTAVFAILFLVAFLTWASAGQTIPVPGLLVGTVALSVPLIFGALGGVLSERVGV VNVAIEGQLLAGAFVSAVVASLTGQPLIGLASAMVAGMLVSFVLAAFAIKYLVDQVIV GVVLNVLVTGLTSFLFSQVLSADPGRLNSPPRFDRIDIPVLGQIPIIGPVLFRQTIIV YVMYVAVFLVWYCLFHTRWGLRLRAVGEHPQAADTVGIKVSATRFWNVSLAGAIAGLG GAFFTLGSVGAFNKEMTAGAGFIALAAVIFGRWDPLRATLAALLFGFASNLQNVLGVI GSPVPSEFMLMLPYVVTIAAVAGLVGQVRGPAAAGKPYVKS" misc_feature complement(order(3011957..3012025,3012035..3012103, 3012122..3012175,3012185..3012253,3012350..3012418, 3012509..3012577,3012596..3012664,3012677..3012745, 3012764..3012832,3012845..3012913,3012932..3013000, 3013058..3013126)) /locus_tag="CMS_2859" /old_locus_tag="CMS2859" /note="12 probable transmembrane helices predicted for CMS2859 by TMHMM2.0 at aa 33-55, 75-97, 104-126, 131-153,160-182, 187-209, 216-238, 269-291, 324-346, 350-367,374-396 and 400-422" misc_feature complement(3011984..3012823) /locus_tag="CMS_2859" /old_locus_tag="CMS2859" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 8.8e-40" gene complement(3013219..3014580) /locus_tag="CMS_2860" /old_locus_tag="CMS2860" /db_xref="GeneID:6158382" CDS complement(3013219..3014580) /locus_tag="CMS_2860" /old_locus_tag="CMS2860" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711493.1" /db_xref="GI:170783159" /db_xref="GeneID:6158382" /translation="MTDDTTRPEGQGPEDPPAGQLPASGREAGSVGDPTRSESPAGVP AVAGGDGDEGSRAGQILREIASGSALLSVLAVVLSLIVGALLIAVTDEETQKAAGYFF SRPLDTLRAGWDAASGAYSALFQGSIYNFRRPGFANGIKPLTETLTFATPLIAAGLGV ALAFRVGLFNIGARGQMLIAAACAGWVGFSFDLPPVIHLVLAVGAGIVGGAVWGGIVG LLKARTGAHEVIVTIMLNYVAFYLLSYLLRTPGLLQAPGSNNPKTPAMLDTAVFPALL GDGYSLHAGFLVVVVATVIVWYLLNRSGLGFRFRAVGENPSAARVAGIDVKNSYLYAM LISGGLAGLAGASQVLGTVTTGFSSGIDAGIGFDAITVALLGRSRPWGVFVAGILFGA FKAGGFSMQAAEGVPIDIVVVVQSLIVLFIAAPPLVRAVFRLPAPGQARRTTRIRKAA LSS" misc_feature complement(order(3013285..3013353,3013381..3013440, 3013453..3013521,3013531..3013599,3013678..3013746, 3013840..3013908,3013927..3013995,3014074..3014142, 3014188..3014256,3014314..3014382)) /locus_tag="CMS_2860" /old_locus_tag="CMS2860" /note="10 probable transmembrane helices predicted for CMS2860 by TMHMM2.0 at aa 67-89, 109-131, 147-169,196-218, 225-247, 279-301, 328-350, 354-376, 381-400 and 410-432" misc_feature complement(3013312..3014157) /locus_tag="CMS_2860" /old_locus_tag="CMS2860" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 4.1e-61" gene complement(3014577..3016118) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /db_xref="GeneID:6158383" CDS complement(3014577..3016118) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711494.1" /db_xref="GI:170783160" /db_xref="GeneID:6158383" /translation="MKLELRGITKRFGALVANDHIDLVVHPGEIHCLLGENGAGKSTL MNVLYGLYQAEEGEILLDDRVARFAGPGDAMAAGIGMVHQHFMLIPVFTVAENVMLGH EETKLGGRLDLAGARAKVREISARFGFDVDPDALVADLPVGVQQRVEIIKALSRDAEV LVFDEPTAVLTPQETDELMVIMKQLRDAGTGIVFITHKLREVREVADRITVIRLGKVV GEAEPTASNAELASLMVGRSVSLTVQKEPATPGAAALVVRDLTVVDASGQVVVDGVSF EVHAGEILAIAGVQGNGQTELTEAILGLQPRVSGTIDLDGTRLTGRSVRRVLDAGVGF VPEDRNDDGLVGEFTIAENLMLDRSDSPPFVVAGSLKLGYLDEFARDRVREFDIRTQG IDTHVGRLSGGNAQKVVLARELSRDLRLFVAAQPTRGLDVGSIEFVHTRVVETRDRGL PVIVVSTELDEVAALADRIAVMYRGGIVGIVPGDTPRDVLGLMMAGEVPASVPTTTTA GGRTA" misc_feature complement(3014694..3015278) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 6.9e-17" misc_feature complement(3014877..3014921) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /note="PS00211 ABC transporters family signature." misc_feature complement(3015474..3016037) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 3.9e-47" misc_feature complement(3015993..3016016) /locus_tag="CMS_2861" /old_locus_tag="CMS2861" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(3016200..3017294) /locus_tag="CMS_2862" /old_locus_tag="CMS2862" /db_xref="GeneID:6158384" CDS complement(3016200..3017294) /locus_tag="CMS_2862" /old_locus_tag="CMS2862" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711495.1" /db_xref="GI:170783161" /db_xref="GeneID:6158384" /translation="MTITTRKAALGGLAAVGITAILAGCGAAPESTAGGTGGAAKSDL VSCMVSDSGGFDDKSFNQLGFEGLTKAATDLGLDTPKTVESAAETDFAPNLTNLADQG CGLIVTVGFLLADATKEAAAANPDTEYAIIDDASIDAPNVKPITFNTSEAAFLAGYAA AAYSKTGTVGTFGGLQIPTVTIFMDGFVDGVNYYNEQKGKDVKAIGWDVASQSGSFTG EFVANQTAKTAAQTLIDQGADVIMPVGGPIFLSAGEAIRDSSDKKVVMVGVDSDAYET APDLKDLFLTSVLKGIDAGVEDVVKTAADDKFDATPYVGTLKNGGVDIAPFHDYESEV PSDLSGELETIKAGIIDGSITVESPSSLTK" sig_peptide complement(3016200..3016316) /locus_tag="CMS_2862" /old_locus_tag="CMS2862" /note="Signal peptide predicted for CMS2862 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.555 between residues 39 and 40" misc_feature complement(3016230..3017255) /locus_tag="CMS_2862" /old_locus_tag="CMS2862" /inference="protein motif:HMMPfam:PF02608" /note="HMMPfam hit to PF02608, Basic membrane lipoprotein,score 4.9e-45" misc_feature complement(3017220..3017252) /locus_tag="CMS_2862" /old_locus_tag="CMS2862" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(3017445..3018521) /locus_tag="CMS_2863" /old_locus_tag="CMS2863" /db_xref="GeneID:6158385" CDS complement(3017445..3018521) /locus_tag="CMS_2863" /old_locus_tag="CMS2863" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711496.1" /db_xref="GI:170783162" /db_xref="GeneID:6158385" /translation="MPRTRGAVRAVILPIALLSAAALAGCGAAPEPGATGSASASDYC ARMVTNSGGLQDRSFNQSSWEGLQRAEQELGIQADVLVSTSETDLAPNVEQAVGTGCG FILTVGYELADATSAAAAANPDVHFSIVDEVVDAPNVKPLVFDTAQASYLAGYLAAGV SETGKVGTFGGGNQPPVTLFMDGFVDGVAAYNQAHGTSVQALGWDAAAQDGTFTGDFE DVSKGQTTTQNLLDQGADVIMPVAGQVGEGAASAILAHGSGKLIWVDNDGYDTLPAEY RPLLLTSVLKDTGEAVVDIVADDQKGSFTSEPYVGTLANGGVGLAEYHDLAASVSPEL QSELDALKARIVSGDVQVKSVSTP" misc_feature complement(3017454..3018383) /locus_tag="CMS_2863" /old_locus_tag="CMS2863" /inference="protein motif:HMMPfam:PF02608" /note="HMMPfam hit to PF02608, Basic membrane lipoprotein,score 4.8e-24" gene complement(3018596..3019717) /gene="manC" /locus_tag="CMS_2864" /old_locus_tag="CMS2864" /db_xref="GeneID:6158386" CDS complement(3018596..3019717) /gene="manC" /locus_tag="CMS_2864" /old_locus_tag="CMS2864" /EC_number="2.7.7.22" /codon_start=1 /transl_table=11 /product="mannose-1-phosphate guanylyltransferase" /protein_id="YP_001711497.1" /db_xref="GI:170783163" /db_xref="GeneID:6158386" /translation="MTEQTSAISRFYSVIPAGGVGSRLWPLSRADAPKFLHDLTGSGR TLLRDTWERLAPLSGEDRIMVVTGRAHRAAVEAQLPELADPNVVLESEGRDSTAAIAL AAAILQRREPGVIIGSFAADHVIADPDRFRDTVREAVIAADAGYITTIGITPTEPATG FGYIHTGKALSIPDAPHALKVASFVEKPSIGVARGYVKGGTHLWNAGMFIARADRLLE ELGRTEPELLKGVLELAEAWDTADRGLVVDRVWPNLKKIAIDYAVAEPAAARGALAVI PGRFTWDDVGDFASVAKMHSSGRKSDLVILGEDARVLSDASSGIVVANSKRVISLIGV RDIVVVDTPDALLVTTKENAQRVKSVVDALKLSGGTDVL" misc_feature complement(3018815..3019678) /gene="manC" /locus_tag="CMS_2864" /old_locus_tag="CMS2864" /inference="protein motif:HMMPfam:PF00483" /note="HMMPfam hit to PF00483, Nucleotidyl transferase,score 1.1e-43" gene 3019835..3021010 /locus_tag="CMS_2865" /old_locus_tag="CMS2865" /db_xref="GeneID:6158802" CDS 3019835..3021010 /locus_tag="CMS_2865" /old_locus_tag="CMS2865" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711498.1" /db_xref="GI:170783164" /db_xref="GeneID:6158802" /translation="MRVAVVSESFLPTVNGVTTSVCRVLEHLRDRGHQVMVIAPDAGA PSEFAGFPVHGVPAFAYRQFPVGIPSPQVLRLLTDFTPDVLHTASPLFLGAQAIAAAT RIDTPSVAVFQTDVAGYARRNRLAATAPYVWRLVRWIHQGADLTLAPSSAAAADLAAA GVERVARWGRGVDLDRYHPRNRAMEDAVALRHRVAPGGETVVGYVGRIAPEKQLERFS ALRGIPGVRFLIAGDGPSQASARRALAGMPVTWLGRVGGRELAAAYAAMDVFVHTGTE ETFGQTVQEAHASGLPVVAPHAGGPIDLVAHGTDGFLFDPASPRDAHLRRLVDELVAS EPMRLRMGEAGRRAVLGRSWATIGDELIGHYGRAVSARRSALQAAGPADAGPVPVVA" misc_feature 3020390..3020878 /locus_tag="CMS_2865" /old_locus_tag="CMS2865" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 3.7e-22" gene 3021241..3021585 /gene="sdhC" /locus_tag="CMS_2866" /old_locus_tag="CMS2866" /db_xref="GeneID:6158387" CDS 3021241..3021585 /gene="sdhC" /locus_tag="CMS_2866" /old_locus_tag="CMS2866" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase cytochrome b556 subunit" /protein_id="YP_001711499.1" /db_xref="GI:170783165" /db_xref="GeneID:6158387" /translation="MWSWVLHRITGVSIFFFLLVHVLDTSLIRVSPEAYNAVIGTYKN PIMGIGEVALVGAIGFHALNGLRIILIDFWRFGAKHQRLMFYVVIGLWVVLMAGFVPR HLMNVFSEAGWI" misc_feature 3021241..3021531 /gene="sdhC" /locus_tag="CMS_2866" /old_locus_tag="CMS2866" /inference="protein motif:HMMPfam:PF01127" /note="HMMPfam hit to PF01127, Succinate dehydrogenase,cytochrome b subunit, score 2.2e-05" misc_feature order(3021265..3021324,3021382..3021450,3021487..3021555) /gene="sdhC" /locus_tag="CMS_2866" /old_locus_tag="CMS2866" /note="3 probable transmembrane helices predicted for CMS2866 by TMHMM2.0 at aa 9-28, 48-70 and 83-105" gene 3021576..3022052 /gene="sdhD" /locus_tag="CMS_2867" /old_locus_tag="CMS2867" /db_xref="GeneID:6158979" CDS 3021576..3022052 /gene="sdhD" /locus_tag="CMS_2867" /old_locus_tag="CMS2867" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase hydrophobic membrane anchor protein" /protein_id="YP_001711500.1" /db_xref="GI:170783166" /db_xref="GeneID:6158979" /translation="MDLIVSDIAQQVSIERPRQPRQPRRQGGVNWEKWGWMYMRASGV VLVVLIFGHLYVNLIQGEGIKAIDFAFVGGKLSDPFWKVWDIALLWLAVIHGANGMRT LVNDYAASPRTRTILKGALVTSTVVLLVLGTLVVFTFDPCPAGQPADLLPSFCGDL" misc_feature 3021618..3021971 /gene="sdhD" /locus_tag="CMS_2867" /old_locus_tag="CMS2867" /inference="protein motif:HMMPfam:PF01127" /note="HMMPfam hit to PF01127, Succinate dehydrogenase,cytochrome b subunit, score 3.1e-05" misc_feature order(3021675..3021743,3021822..3021890,3021924..3021992) /gene="sdhD" /locus_tag="CMS_2867" /old_locus_tag="CMS2867" /note="3 probable transmembrane helices predicted for CMS2867 by TMHMM2.0 at aa 34-56, 83-105 and 117-139" gene 3022086..3023909 /gene="sdhA" /locus_tag="CMS_2868" /old_locus_tag="CMS2868" /db_xref="GeneID:6158980" CDS 3022086..3023909 /gene="sdhA" /locus_tag="CMS_2868" /old_locus_tag="CMS2868" /EC_number="1.3.99.1" /note="part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase flavoprotein subunit" /protein_id="YP_001711501.1" /db_xref="GI:170783167" /db_xref="GeneID:6158980" /translation="MTTDTATPGSEPSASTIVDGVHYHQFDIVIVGAGGAGMRAAIEA GPQANTAVISKLYPTRSHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAA EILAKEAIDAVIDLENMGLPFNRTPDGKIDQRRFGGHTADHGKSPVRRSCYAADRTGH MILQTLYQNCVKFGINFFNEFYVLDLVMAEVDGKEQPAGVVALELSTGEIHVFQSKAV IFATGGFGKIYKTTSNAHTLTGDGVGIIWRKGLPLEDMEFFQFHPTGLAGLGILLSEA ARGEGAILRNSEGERFMERYAPTIKDLAPRDIVARCMATEIREGRGAGPNEDYVYLDI THLEPAVIDAKLPDITEFARTYLGVEPYTEPVPVLPTAHYAMGGIPTNIKAEVLSDNS TVVPGLYAAGECACVSVHGSNRLGTNSLLDINVFGKRAGNYAAEYVKGVDFTPLPADA ADFVKGLVEGARNSNGTERISTLRRELQESMDRNAQVFRTEDTLIEVTKVIADLRDRY TNIQVQDKGQRFNTDLLEAIELGFLLDLAEVVVYSAMYRKESRGGHFREDFPKRDDEN YMVHTMAYLTGDAHSTDAGDHIKLSTKPVVITNYQPMERKY" misc_feature 3022263..3022292 /gene="sdhA" /locus_tag="CMS_2868" /old_locus_tag="CMS2868" /note="PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site." misc_feature 3022458..3023447 /gene="sdhA" /locus_tag="CMS_2868" /old_locus_tag="CMS2868" /inference="protein motif:HMMPfam:PF00890" /note="HMMPfam hit to PF00890, Fumarate reductase/succinate dehydrogenase flavoprotein,N-terminal, score 2e-182" misc_feature 3023505..3023906 /gene="sdhA" /locus_tag="CMS_2868" /old_locus_tag="CMS2868" /inference="protein motif:HMMPfam:PF02910" /note="HMMPfam hit to PF02910, Fumarate reductase/succinate dehydrogenase flavoprotein,C-terminal, score 2.5e-58" gene 3024030..3024728 /gene="sdhB" /locus_tag="CMS_2869" /old_locus_tag="CMS2869" /db_xref="GeneID:6158977" CDS 3024030..3024728 /gene="sdhB" /locus_tag="CMS_2869" /old_locus_tag="CMS2869" /EC_number="1.3.99.1" /note="part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase iron-sulfur subunit" /protein_id="YP_001711502.1" /db_xref="GI:170783168" /db_xref="GeneID:6158977" /translation="MTLIIRRYLPGQDAEPRWEDFDVEVYPTDRILDALHKIKWEQDG SLTFRRSCAHGVCGSDAMRINGRNRMACKTLIKDLDISQPIYVEAIKGLPLEKDLVVD MEPFFESFRDVQPFLISNTKPEKGKERIQSAAERARFDDTTKCILCAACTSSCPVFWT DGQYFGPAAIVNAHRFIFDSRDESNVRLDILNDKEGVWRCRTTFNCSEACPRGIQVTQ AIAEVKQAIMRGKA" misc_feature 3024096..3024263 /gene="sdhB" /locus_tag="CMS_2869" /old_locus_tag="CMS2869" /inference="protein motif:HMMPfam:PF00111" /note="HMMPfam hit to PF00111, Ferredoxin, score 0.042" misc_feature 3024462..3024497 /gene="sdhB" /locus_tag="CMS_2869" /old_locus_tag="CMS2869" /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature." gene complement(3024803..3026458) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /db_xref="GeneID:6158978" CDS complement(3024803..3026458) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /EC_number="2.7.3.9" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase" /protein_id="YP_001711503.1" /db_xref="GI:170783169" /db_xref="GeneID:6158978" /translation="MRITGIGVGHGVATGPVMRMPDPLPEPGTEPFTGHADAEVARVA DALAATADDLAARGARAGGDAKDVLDAQSLMARDPALLDSVSRLVGQGRSGERAVFEA FATFQELLTGMGGYMAERAADLADVAQRVIARLRGVPAPGIPTADAPFVLVARDLAPA DTALLELDRVLALVTTDGGPTSHTAILARSRSIPAIVGATGAAGLPEGTEVVVDAAAG LVIADPSDAEREDAVRRIRAREEALALPVTDGALADGTPVPLLANLGSPAEAARAVEL GAEGVGLFRTEFLFLDAAEAPSVAAQTAQYTALLEAFPDRKVVVRALDAGADKPLAFL TDADEENPALGLRGLRALRAHEQILRDQLTALAAADAATDADLWVMAPMVADAEETAY FVDLGRELGLRTVGVMAEVPSLALLADQVVEVADFVSIGTNDLTQYTMAADRLLGSVA SYQDPWHPAVLRLVRTLGDAGRASGTPVGICGEAAADPLLAVVLVGLGATSLSMTPAA LADVRLELGRRTLDDARAAAQAVLCARTAADARAAAERILAAA" misc_feature complement(3024896..3025744) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /inference="protein motif:HMMPfam:PF02896" /note="HMMPfam hit to PF02896, PEP-utilizing enzyme, score 4.6e-80" misc_feature complement(3025127..3025183) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /note="PS00742 PEP-utilizing enzymes signature 2." misc_feature complement(3025805..3026065) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /inference="protein motif:HMMPfam:PF00391" /note="HMMPfam hit to PF00391, PEP-utilising enzyme,mobile region, score 3.6e-18" misc_feature complement(3025892..3025927) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /note="PS00370 PEP-utilizing enzymes phosphorylation site signature." misc_feature complement(3026096..3026452) /gene="ptsI" /locus_tag="CMS_2870" /old_locus_tag="CMS2870" /inference="protein motif:HMMPfam:PF05524" /note="HMMPfam hit to PF05524, PEP-utilising enzyme,N-terminal, score 2.7e-18" gene 3026584..3027708 /locus_tag="CMS_2871" /old_locus_tag="CMS2871" /db_xref="GeneID:6158893" CDS 3026584..3027708 /locus_tag="CMS_2871" /old_locus_tag="CMS2871" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711504.1" /db_xref="GI:170783170" /db_xref="GeneID:6158893" /translation="MTAPDGRGRPDRAASASASPGTPPQDPPAPTGIPALVTRVMALK PVRVFLAYGAAGGPILAAGMSYQAVFAVFAALAVGFSVAGSVLADNPMLLDSLLSIIQ GAVPGLFGPDGVIKDPQELLQSRAINLAGIIGSIGLLVTALGWLASTRDSVRRIFELP PPITFFLLLKVKDLGLALVFALAMLLSAALSVVSTGLLGFVFRLMQVGEDSLLAIVVG RTVGLALVLALDTAVLAGAYRILSGVRIPRTQLLQGALLGGVAMGVLKVLGTALLGGA SRNPLLASFAVIIGLLIWFNLICQVILICASWIAVSMQDRGIDARSLTPEQLEQERVA KLDEARRILEEEERARERERYAQSRGITRVLLGLRRRRRR" misc_feature order(3026725..3026793,3026959..3027027,3027118..3027186, 3027229..3027297,3027334..3027402,3027445..3027513) /locus_tag="CMS_2871" /old_locus_tag="CMS2871" /note="6 probable transmembrane helices predicted for CMS2871 by TMHMM2.0 at aa 48-70, 126-148, 179-201,216-238, 251-273 and 288-310" misc_feature 3026740..3027531 /locus_tag="CMS_2871" /old_locus_tag="CMS2871" /inference="protein motif:HMMPfam:PF03631" /note="HMMPfam hit to PF03631, Ribonuclease BN, score 8.5e-17" gene 3027719..3028564 /locus_tag="CMS_2872" /old_locus_tag="CMS2872" /db_xref="GeneID:6158388" CDS 3027719..3028564 /locus_tag="CMS_2872" /old_locus_tag="CMS2872" /codon_start=1 /transl_table=11 /product="putative nuclease" /protein_id="YP_001711505.1" /db_xref="GI:170783171" /db_xref="GeneID:6158388" /translation="MPSNLRVASINTNGIRAAFRKGMGDWLDTRDVDILAIQEVRAET SDIEGLLGPEWNVLHDAATAKGRAGVAIASRRRAEIHRVAIGAEDFDSAGRWLEADYD VDGTIVTVVSAYVHSGEVGTAKQDEKWRFLDGMEKRLPEIAEHSELAVVVGDLNVGHR ELDIRNWKGNVKRAGFLPRERAYLDRILGARGEDVTGVDGSTGPGLGWVDVGRQQAGE VDGPYTWWSWRGKAFDNDTGWRIDYQLATPALAEKVVGYAVDRAEAYDKRWSDHTPVV VDYAI" misc_feature 3027731..3028555 /locus_tag="CMS_2872" /old_locus_tag="CMS2872" /inference="protein motif:HMMPfam:PF03372" /note="HMMPfam hit to PF03372,Endonuclease/exonuclease/phosphatase, score 5.4e-39" gene 3028653..3029666 /gene="trpS" /locus_tag="CMS_2873" /old_locus_tag="CMS2873" /db_xref="GeneID:6158389" CDS 3028653..3029666 /gene="trpS" /locus_tag="CMS_2873" /old_locus_tag="CMS2873" /EC_number="6.1.1.2" /note="catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase" /protein_id="YP_001711506.1" /db_xref="GI:170783172" /db_xref="GeneID:6158389" /translation="MTARPVLFSGMQPSADSLQIGNYIGALLQWKELQTTHDAVFCVV DLHAITVPQDPGALRDSTRRTAAQYIAAGIDPAVSTLFVQSHVSAHTELAWILNTLTG FGEASRMTQFKDKSQKQGADATTLGLFAYPTLMAADILLYGTEVVPVGDDQKQHVELT RDLAKRFNSRFGDVFRIPEPMIQKDTARIYDLQDPTSKMSKSAASDAGVVWLLDEPAK TAKKIRSAVTDTGREVRFDRGEKPGVSNLLTILSAFEGTAVPALEERYAGRGYGDLKK DVAETVTGVFEPIRARSLELLDDPAELDRMLAGNAERAEERADAMLARVYDAVGLVRR VGR" misc_feature 3028653..3029513 /gene="trpS" /locus_tag="CMS_2873" /old_locus_tag="CMS2873" /inference="protein motif:HMMPfam:PF00579" /note="HMMPfam hit to PF00579, Aminoacyl-tRNA synthetase,class Ib, score 8.9e-101" gene 3029663..3030469 /locus_tag="CMS_2874" /old_locus_tag="CMS2874" /db_xref="GeneID:6159077" CDS 3029663..3030469 /locus_tag="CMS_2874" /old_locus_tag="CMS2874" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001711507.1" /db_xref="GI:170783173" /db_xref="GeneID:6159077" /translation="MTLRLVLLDLDDTLVDHRGAVAEGITAHAAARGLLDAEDATAAD RAVGLWRDLEEEHYHRYLAGELDFQGKRRARVRGFLAAMGSPDADDLTDDDAATDAWF AGYLTGYAAAWRTLPGAHDALDEIERRHPGVRLGIVTNGERSQQEPKIAAVGLTARLA PVVCSGDLDFAKPDPRIFHLACAEAGVDPADAVMVGDRLRTDALGAADAGLGGVWLDR GGRSRIVAPAGGDAAVDSRVPGAVLRITALDALAAAVTALSDRPGRGAGA" misc_feature 3029669..3030319 /locus_tag="CMS_2874" /old_locus_tag="CMS2874" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 1.6e-29" gene complement(3030583..3031674) /locus_tag="CMS_2875" /old_locus_tag="CMS2875" /db_xref="GeneID:6158390" CDS complement(3030583..3031674) /locus_tag="CMS_2875" /old_locus_tag="CMS2875" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711508.1" /db_xref="GI:170783174" /db_xref="GeneID:6158390" /translation="MMMQIGARWALASAVVAACLLGGGPATAAGSAPRPALPPPAARG EASSGDIVDATVESPGETASDVSSTEYWTPERMRTAIEAPVPTSLSDPGHPDASGVPD EESGSAAVARMETLAQPAAPTSAAVGPQAFEEPRGSAVVGRVFYTDPGEVHRYACSGV AINTPSGRVVMTAGHCVHTGQGGGWQRHWEFVPGYVDGRAPFGHFPEKHLLTSTAWIT KGSEGPIPSDVAATDIGFAVTAPDPAGRSLGSIVGGDGLTIGAAPSGLPIELLAYPVN RLGGARLSACRTSTVDSGHAGVMAAEGCGFEGGGSGGPWVDRFDAKTGRGFVRGVTSG SAGEVYLEAAVPSELTKRMLAQADRDGRG" misc_feature complement(3031147..3031164) /locus_tag="CMS_2875" /old_locus_tag="CMS2875" /note="PS00134 Serine proteases, trypsin family, histidine active site." misc_feature complement(3031582..3031650) /locus_tag="CMS_2875" /old_locus_tag="CMS2875" /note="1 probable transmembrane helix predicted for CMS2875 by TMHMM2.0 at aa 75-97" misc_feature complement(3031618..3031650) /locus_tag="CMS_2875" /old_locus_tag="CMS2875" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 3032162..3033229 /gene="ribD" /locus_tag="CMS_2876" /old_locus_tag="CMS2876" /db_xref="GeneID:6158391" CDS 3032162..3033229 /gene="ribD" /locus_tag="CMS_2876" /old_locus_tag="CMS2876" /EC_number="1.1.1.193" /codon_start=1 /transl_table=11 /product="riboflavin biosynthesis protein RibD" /protein_id="YP_001711509.1" /db_xref="GI:170783175" /db_xref="GeneID:6158391" /translation="MHDGPTAPEAHALAPGDPALERAMRRGLELAAEGPAWGPNPRVG CVILDASGRVIAEGRHRGAGSAHAEVDALRQLPAGGARGATAVVTLEPCNHTGRTGPC AAALVEAGVARVAYAVADPGAESSGGAARLRAAGVEVVPGVLADEAAAFLQVWLGSAS LGRPFVTAKWASSLDGRIAAADGSSRWITGTAAREDVHRRRAEADAILVGTGTVLADD PALTARRPDGIPYPHQPAPVVLGDRAIPDDAAVHRHPRRLIRLPGHDPAAALDELGNR GIRHVFVEGGPTIVSALLAAGLVDEVVAYLAPVLLGGPRTATGDLGVPSMPDAHRLTL ISTTRLGDDLLVIARPTTEGQ" misc_feature 3032213..3032515 /gene="ribD" /locus_tag="CMS_2876" /old_locus_tag="CMS2876" /inference="protein motif:HMMPfam:PF00383" /note="HMMPfam hit to PF00383, Cytidine/deoxycytidylate deaminase, zinc-binding region, score 4.2e-28" misc_feature 3032360..3032479 /gene="ribD" /locus_tag="CMS_2876" /old_locus_tag="CMS2876" /note="PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature." misc_feature 3032651..3033199 /gene="ribD" /locus_tag="CMS_2876" /old_locus_tag="CMS2876" /inference="protein motif:HMMPfam:PF01872" /note="HMMPfam hit to PF01872, Bacterial bifunctional deaminase-reductase, C-terminal, score 3.9e-63" gene 3033226..3033900 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /db_xref="GeneID:6158932" CDS 3033226..3033900 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /EC_number="2.5.1.9" /note="catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /protein_id="YP_001711510.1" /db_xref="GI:170783176" /db_xref="GeneID:6158932" /translation="MMFTGIIEERGRVLALDAEGDSARITVEAPLAVSDARHGDSISV DGVCLTVVAQTPEGFTADVMRQTLVMSSLGRLGVGDRVNLERAARVGDRLGGHIVQGH VDGTGRLLATTPGEAWRILRFSLPAELSPLVVDRGSITVQGVSLTVSAVSPTDTPDAD AWFEVSLIPETLAATTLGALELGDEVNLETDVLARHVQRMLALDARRDSASATDAASA TGEARA" misc_feature 3033235..3033486 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /inference="protein motif:HMMPfam:PF00677" /note="HMMPfam hit to PF00677, Lumazine-binding protein,score 2.8e-23" misc_feature 3033442..3033480 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /note="PS00693 Riboflavin synthase alpha chain family signature." misc_feature 3033523..3033798 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /inference="protein motif:HMMPfam:PF00677" /note="HMMPfam hit to PF00677, Lumazine-binding protein,score 9e-21" misc_feature 3033754..3033792 /gene="ribE" /locus_tag="CMS_2877" /old_locus_tag="CMS2877" /note="PS00693 Riboflavin synthase alpha chain family signature." gene 3033897..3035258 /gene="ribA" /locus_tag="CMS_2878" /old_locus_tag="CMS2878" /db_xref="GeneID:6158933" CDS 3033897..3035258 /gene="ribA" /locus_tag="CMS_2878" /old_locus_tag="CMS2878" /EC_number="3.5.4.25" /codon_start=1 /transl_table=11 /product="riboflavin biosynthesis protein RibA" /protein_id="YP_001711511.1" /db_xref="GI:170783177" /db_xref="GeneID:6158933" /translation="MSLADIPAALQELRAGRPVIVVDDEGRENEGDVLLAAESASPEW VAWLVKHSSGFICAPMTNEIADRLELPLMVADNRDPRGTAYTVSVDAADRLSTGISAS DRAHTLRVLADLGSVPTSLHRPGHILPLRAVDGGVRERDGHTEAAVDLLTLAGLTPVG AISEIVQDDGEMMRLPGLLALGEREGVLVVTIAALTAHLEEFHCDRPLEAAVAIPEAS RVIFEVETTVPTTHGSVKLRAYRDRTTGADHVAIVAGEPRAHGTLVRVHSECLTGEAL GSLKCECGPQLDAALDEIQRDGGVVVYLRGHEGRGIGLINKLRAYRLQEDGFDTLDAN VALGLPADARDYGAASAILQEMGIEDVRLLTNNPEKVRQLEAHGVEVTERVPLVVGVN EVNAGYLETKRDRMGHRMVLDTDMHIGSDAYPDAEAPDGLTTTTSGPGTTTITTTPEE ETA" misc_feature 3033912..3034499 /gene="ribA" /locus_tag="CMS_2878" /old_locus_tag="CMS2878" /inference="protein motif:HMMPfam:PF00926" /note="HMMPfam hit to PF00926, 3,4-Dihydroxy-2-butanone 4-phosphate synthase, score 9.5e-87" misc_feature 3034548..3035057 /gene="ribA" /locus_tag="CMS_2878" /old_locus_tag="CMS2878" /inference="protein motif:HMMPfam:PF00925" /note="HMMPfam hit to PF00925, GTP cyclohydrolase II,score 4.6e-91" gene 3035255..3035737 /gene="ribH" /locus_tag="CMS_2879" /old_locus_tag="CMS2879" /db_xref="GeneID:6158931" CDS 3035255..3035737 /gene="ribH" /locus_tag="CMS_2879" /old_locus_tag="CMS2879" /EC_number="2.5.1.9" /note="RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not" /codon_start=1 /transl_table=11 /product="6,7-dimethyl-8-ribityllumazine synthase" /protein_id="YP_001711512.1" /db_xref="GI:170783178" /db_xref="GeneID:6158931" /translation="MSGHGAPEIDPTALDGTGLAVTVVAGRWHDEISAGLLAGAQRVL DAAGVTTTVIRVPGSFELPVVARAALDAGADAVVALGVIIRGGTPHFEYVSDAATSGL TQASLLTGKPVGFGLLTLDDEQQGLDRAGLPDSKEDKGAEAAEAAVTTALLLKAIRGA" misc_feature 3035300..3035725 /gene="ribH" /locus_tag="CMS_2879" /old_locus_tag="CMS2879" /inference="protein motif:HMMPfam:PF00885" /note="HMMPfam hit to PF00885,6,7-dimethyl-8-ribityllumazine synthase, score 1.1e-53" gene 3035839..3036693 /locus_tag="CMS_2880" /old_locus_tag="CMS2880" /db_xref="GeneID:6158935" CDS 3035839..3036693 /locus_tag="CMS_2880" /old_locus_tag="CMS2880" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001711513.1" /db_xref="GI:170783179" /db_xref="GeneID:6158935" /translation="MHPALDVRSLSIAIDRTSLVHGVDLRVGAGERVALVGASGSGKS LTAQAVLGTLPPGSAVRGVVELGGRTVTPATPRQRLGRVAAVQQDSLAALNPLVTVGA QLVAALRAARARGSAADGGLLTRRDARREVVALLTEVGIEDPDGALPAFAAELSGGQR QRVCLALALLCRADLLLADEPTTALDVVTQARVVDVIRRRLDATGQALLFITHDLAVA AALCDRVVVLEAGRVVEAGSMRELVRRPRHAYSRALVAAAARRVPGGSTGPVAASASP PLGAAAAR" misc_feature 3035944..3036531 /locus_tag="CMS_2880" /old_locus_tag="CMS2880" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.6e-40" misc_feature 3035947..3035970 /locus_tag="CMS_2880" /old_locus_tag="CMS2880" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 3036301..3036345 /locus_tag="CMS_2880" /old_locus_tag="CMS2880" /note="PS00211 ABC transporters family signature." gene 3036690..3037547 /locus_tag="CMS_2881" /old_locus_tag="CMS2881" /db_xref="GeneID:6158392" CDS 3036690..3037547 /locus_tag="CMS_2881" /old_locus_tag="CMS2881" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding subunit" /protein_id="YP_001711514.1" /db_xref="GI:170783180" /db_xref="GeneID:6158392" /translation="MTDALHPLGGSTDALSATGISHRYPPRRDPAARRTARAARASGA PGPAPALDDVSFRVAPGETIGIVGRSGSGKSTLLRVLLALEAPTAGTVALGDRTVAPG RASALRWYRRRVQAVPQDPGASLEPRMTVRQLIREPLRRLDVPGDHAAIVARALDDVG LAASLADRRPRELSGGQAQRVALARAIATSPGILLADEPVSGVDLPLRDRIIALLGDL VRERGLGLVLVSHDLDAVARLCGRSVVLAGGRVVEEGPTGRLLADPGHPATRELADAV PRLPGALTA" misc_feature 3036870..3037436 /locus_tag="CMS_2881" /old_locus_tag="CMS2881" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 7.2e-59" misc_feature 3036891..3036914 /locus_tag="CMS_2881" /old_locus_tag="CMS2881" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 3037206..3037250 /locus_tag="CMS_2881" /old_locus_tag="CMS2881" /note="PS00211 ABC transporters family signature." gene 3037544..3038989 /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /db_xref="GeneID:6158393" CDS 3037601..3038989 /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711515.1" /db_xref="GI:170783181" /db_xref="GeneID:6158393" /translation="MLPSPGRPGPARPGTAPRAARTGSPPAAVLLASQLVFNLGFYAV VPFLAVVMRDDLGLGALAIGLVLGARTFSQQGLFLLGGMLADRFGPRTLIAAGCVVRV SGYLGLALAADLVGFLVGAILTGLGGALFSPALQSLVASADVRARASRLPGRPSLFAA LVLVGEVGAAVGPLAGAALLGLGFSATVLVGAALFAAVGVALWCVIPADAGRVVAASA APVGSAPPADRWAAVRDRRFLAFSAMFAVDLVAYNQLYLGLPLELARAGAGTAAVGSA FLAVSLLTIALQWPVALLAKRLGPGRALACGFGTTATGFAALALASVVPPPAGAELVP AAILVVCLTLGHMTAGPVTMELVPSFAAGRPTASYYGLLASCGGVAVLVAGGVVGSLL DDAPAVAWGILAALPVAAAVGLPRLLPAPPPAPAHAARPARATAPPTTTPDAPRIADD APRIPAEGPHAR" misc_feature order(3037685..3037753,3037766..3037834,3037940..3038008, 3038069..3038137,3038150..3038218,3038312..3038371, 3038414..3038482,3038507..3038575,3038603..3038671, 3038708..3038776,3038786..3038854) /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /note="11 probable transmembrane helices predicted for CMS2882 by TMHMM2.0 at aa 48-70, 75-97, 133-155, 176-198,203-225, 257-276, 291-313, 322-344, 354-376, 389-411 and 415-437" misc_feature 3037688..3038779 /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" misc_feature 3037895..3037921 /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /note="PS00850 Glycine radical signature." misc_feature 3038696..3038728 /locus_tag="CMS_2882" /old_locus_tag="CMS2882" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 3038979..3040538 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /db_xref="GeneID:6158394" CDS 3038979..3040538 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711516.1" /db_xref="GI:170783182" /db_xref="GeneID:6158394" /translation="MPARRPRPARHARPARTAALIALVAASALALSGCFAASPGSTTG GGQDGDARIRLAMLQPPRSGLTPLSDDAFKLARWSTAETLVTLDDLGDAQPQLATGWT RVDDLTWAFDIRPDVPFHDGTTLTATQAAASLTAAATASPKPRILDGVDLTATADGDR VVVRTATPDPLVPQRMSSPQLAILAASAYGADGTVSPVGTGTGPFRLTAVDGTTSATL DRFDGYWGGRAASAGIDVRFVPDGTARAAALRTGTADVVEAIPVGQAAQVDPQLLHEV AMPRTNTLYLNTRTGPFADPAVRAAAQAAVDRAALVSGVYEGRADEATGLLGPALPWA ADLRDGASYRDALAGRATPAEVDGVPITLGTFTDRAELPEVAVQLEQQLEAAGFQVTQ DVREYQYIEADALAGKFDAFILSRATVLDSGDPAAYLYSDFACQGSFNISQECDPAVD QALADASALPAGPDRRAAIMRVEALVLADDAAVPLLHERVIQGEAAGVTGAVRDPRER ALITADTRVER" sig_peptide 3038979..3039116 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /note="Signal peptide predicted for CMS2883 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.535 between residues 46 and 47" misc_feature 3039036..3039104 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /note="1 probable transmembrane helix predicted for CMS2883 by TMHMM2.0 at aa 20-42" misc_feature 3039048..3039080 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 3039252..3040298 /locus_tag="CMS_2883" /old_locus_tag="CMS2883" /inference="protein motif:HMMPfam:PF00496" /note="HMMPfam hit to PF00496, Bacterial extracellular solute-binding protein, family 5, score 2e-51" gene 3040538..3042331 /locus_tag="CMS_2884" /old_locus_tag="CMS2884" /db_xref="GeneID:6158395" CDS 3040538..3042331 /locus_tag="CMS_2884" /old_locus_tag="CMS2884" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711517.1" /db_xref="GI:170783183" /db_xref="GeneID:6158395" /translation="MGRARDGLVVGASRVVAVGGVVALVGALPWLSGRSPEYTILRAR YADLEATPEALASVRAQLGLDRGPLAVSLDWLAGVVRGDLGTSWISGRPVLPGTLAAL GVSLTLMAFAIAVAVGVAALLCAPALRDATRGRRARGSGALAAALTALPEFLLATALL VVVAVWLRWAPPSGWDGPANAALPALALGIPAGGLVGRLLADAIQAASAERWVATWAM AGLPPTRTTLAVLRRALPSVLGQVGLVLVGLTGGAVAVEQVFAIPGIGRATLGAASSQ DVPALQAGVLALLAVAVAAGALADLARRALLGPALRLGSLPVPDARVPARPRDVVVPA VAAGLLAVIVVAGLARDPLATTAGRLAPPSWHLPFGADASGRDLLGRVGHGAVTTLGT ALVVVIACCAIGLVLGLLPRAALGPIEVANAAPPILAGIVVAAIQGPSTAGAAIAVAA VGWAPLAAHAGALMQEARAQPHVRILPVLAVGRARILLVHLLPAVVGPVVRNAMLRLP GIALTLAALGFLGLGSAPPTPEWGLILSEGSAYAERAPWAVAAPALALVLAAVLAVSL SAHDLTGLLRRRRASAAAARPADATAMAPRG" misc_feature order(3040556..3040624,3040841..3040909,3040970..3041038, 3041081..3041140,3041237..3041305,3041375..3041443, 3041525..3041584,3041690..3041758,3041777..3041845, 3041858..3041926,3042050..3042118,3042176..3042244) /locus_tag="CMS_2884" /old_locus_tag="CMS2884" /note="12 probable transmembrane helices predicted for CMS2884 by TMHMM2.0 at aa 7-29, 102-124, 145-167, 182-201,234-256, 280-302, 330-349, 385-407, 414-436, 441-463,505-527 and 547-569" misc_feature 3040829..3041473 /locus_tag="CMS_2884" /old_locus_tag="CMS2884" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 1.4e-09" misc_feature 3041693..3042280 /locus_tag="CMS_2884" /old_locus_tag="CMS2884" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3.4e-16" gene 3042429..3043391 /locus_tag="CMS_2885" /old_locus_tag="CMS2885" /db_xref="GeneID:6158396" CDS 3042429..3043391 /locus_tag="CMS_2885" /old_locus_tag="CMS2885" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711518.1" /db_xref="GI:170783184" /db_xref="GeneID:6158396" /translation="MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 3042837..3043379 /locus_tag="CMS_2885" /old_locus_tag="CMS2885" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene complement(3043402..3044331) /locus_tag="CMS_2886" /old_locus_tag="CMS2886" /db_xref="GeneID:6158397" CDS complement(3043402..3044331) /locus_tag="CMS_2886" /old_locus_tag="CMS2886" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711519.1" /db_xref="GI:170783185" /db_xref="GeneID:6158397" /translation="MIGVLTGFAIIGFIIAVGYGVGRSGIAGPGAQHSLNRVAFFVAT PALLFTVLAKADLHVVFSTFLLTSASAVAVSAILYLVVARILFRRPVAETTIGAASAS YVNANNIGLPVAIYVLGDAQYVAPVLLLQLLVLAPTTLTILDIASRGSASVVGILTQP LRNPMIIASVLGILIAITGLQVPDAIYEPFRLIGGAAIPIVLMAFGMSLVGRKPLAPG SGRGEIVVASVIKTVVMPLAAFLLARFAFHLDAPQTFAATVIAGLPTAQNIFNFASRY ERGVVLARDTVLITTVASIPVLLVIAALLAPGA" misc_feature complement(order(3043408..3043476,3043513..3043581, 3043594..3043662,3043699..3043758,3043786..3043839, 3043897..3043965,3043978..3044046,3044083..3044151, 3044179..3044232,3044251..3044319)) /locus_tag="CMS_2886" /old_locus_tag="CMS2886" /note="10 probable transmembrane helices predicted for CMS2886 by TMHMM2.0 at aa 5-27, 34-51, 61-83, 96-118,123-145, 165-182, 192-211, 224-246, 251-273 and 286-308" misc_feature complement(3043426..3044325) /locus_tag="CMS_2886" /old_locus_tag="CMS2886" /inference="protein motif:HMMPfam:PF03547" /note="HMMPfam hit to PF03547, Auxin Efflux Carrier, score 6.1e-18" misc_feature complement(3043768..3043830) /locus_tag="CMS_2886" /old_locus_tag="CMS2886" /note="PS00445 FGGY family of carbohydrate kinases signature 2." gene 3044540..3046201 /locus_tag="CMS_2887" /old_locus_tag="CMS2887" /db_xref="GeneID:6158398" CDS 3044540..3046201 /locus_tag="CMS_2887" /old_locus_tag="CMS2887" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface-anchored protein" /protein_id="YP_001711520.1" /db_xref="GI:170783186" /db_xref="GeneID:6158398" /translation="MRLRTRRRLSASVALALALGIAAGGSALPALAATGDGTGTATGT GSGDRTYYSSKTPYQPQGTAAGLAPAPAGFAPVYTESVARHGSRALSSFKYDSLTTQV WEQARSEGALTTLGQTLGPEIQKLTAANEELGYGNLTGQGADQHRGIGARVVQRLPSL FAGIDAGSDQVTLESSGEARATASGKAFAEGLRKADPLLASHLPKDIAKDPATLYFHK SAANADYQAYEDGPAVTAAVDAIHAQPRSHEAARRLLERIYTPAFVDRLAAGRYHFVD GGDGGTHVDDELDAAMMLYNLYIIAPDMTEEVSVDFDRYFSPAGAGDDADTEWFAYLL DSEDFYSKGPAFQGSDITYRMATPLLDDFLDSMDARLAGSTTAATFRFAHAETIIPFA ALLGLPGSTQQVTPEAPYTYATNAWRGETVTPMAANVQWDVFRDAGGRAVVRMLYDEK AIPFRTGCTPIAPGSLFYDAGEVRRCLTGAAAADPGTPAPAAGATLPGSPAEVAAADA SAARGDTLAATGMSADELPFLALLAFALGAAGITAVGVVRRPRHP" sig_peptide 3044540..3044635 /locus_tag="CMS_2887" /old_locus_tag="CMS2887" /note="Signal peptide predicted for CMS2887 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.957 between residues 32 and 33" misc_feature order(3044576..3044644,3046115..3046183) /locus_tag="CMS_2887" /old_locus_tag="CMS2887" /note="2 probable transmembrane helices predicted for CMS2887 by TMHMM2.0 at aa 13-35 and 526-548" misc_feature 3044783..3045973 /locus_tag="CMS_2887" /old_locus_tag="CMS2887" /inference="protein motif:HMMPfam:PF00328" /note="HMMPfam hit to PF00328, Histidine acid phosphatase,score 0.0093" gene 3046366..3047328 /locus_tag="CMS_2888" /old_locus_tag="CMS2888" /db_xref="GeneID:6158399" CDS 3046366..3047328 /locus_tag="CMS_2888" /old_locus_tag="CMS2888" /note="N/C" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711521.1" /db_xref="GI:170783187" /db_xref="GeneID:6158399" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 3046774..3047316 /locus_tag="CMS_2888" /old_locus_tag="CMS2888" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(3047259..3048599) /locus_tag="CMS_2889" /old_locus_tag="CMS2889" /db_xref="GeneID:6158400" CDS complement(3047259..3048599) /locus_tag="CMS_2889" /old_locus_tag="CMS2889" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711522.1" /db_xref="GI:170783188" /db_xref="GeneID:6158400" /translation="MSTRVLDVFLYGRLAAKLERTAPLRYRLVYEAEWFATGGPSISL SLPTLRRVHTGAPVLRFLDNLLPEDDAVRRSWSRENDSGSVEPFHLLSSHGADVAGAL EFHPEGHPARMEGSLEALTEAQIADRIRAIREDRDVGEGDGAPARPGQFSLAGAQGKF ALAWSDGRCHEPTGVQPSTHIFKPRVRNLVDAEIVEHVTMTSAAVLGLSAASTEISSF TDQHSLVVARFDRRADERGFVTRIHQEDLVQALGLPAFRKFEERGGPSVRTILELLDR IDEHEVRAPAKERFMKYLLFSWMVLNTDAHGKNYSLRRWPTGFDLAPIYDASSYLPYV SPAGSRSDDVLSAIEGTHMASRLVDSYGVGDMGAFQWAAVGREAGLDGEAFLEWGRQV AAALPAVFRAVAVELESALQTPVVELLLDVLGHDVGDTRAAGVSPWLEWIRSVL" gene complement(3048596..3048970) /locus_tag="CMS_2890" /old_locus_tag="CMS2890" /db_xref="GeneID:6158401" CDS complement(3048596..3048970) /locus_tag="CMS_2890" /old_locus_tag="CMS2890" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711523.1" /db_xref="GI:170783189" /db_xref="GeneID:6158401" /translation="MTRQWLTRFETAKGDAALSKVMRVLRELDLRLEIETKVSGDVSP EAARAARVPAVNDDFMSALMARVGQEPASDIGTSGSRAAEAVLRRNRDVRVMVEKIGQ QGAALARDPMAPPPPSKQQHRS" gene complement(3049165..3049623) /locus_tag="CMS_2891" /old_locus_tag="CMS2891" /db_xref="GeneID:6158402" CDS complement(3049165..3049623) /locus_tag="CMS_2891" /old_locus_tag="CMS2891" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711524.1" /db_xref="GI:170783190" /db_xref="GeneID:6158402" /translation="MSEPIVITRTFAASRERVFDAWTSPADFSTWFGTAAVDVPLDTL RMDVRVGGAWSAVMRLPDGGSIDWAGEYVELDRPSRIAMTMTDRPDQPAGEPLTVDLE EVAGGATRMTMTQRAGEFTPEQREMTMQGWGAFLDVMEGLVAPDGAGVGR" gene complement(3049777..3051483) /locus_tag="CMS_2892" /old_locus_tag="CMS2892" /db_xref="GeneID:6158403" CDS complement(3049777..3051483) /locus_tag="CMS_2892" /old_locus_tag="CMS2892" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711525.1" /db_xref="GI:170783191" /db_xref="GeneID:6158403" /translation="MSTTATAPAPLLLTQRRIWIIFSALIAGMLLSSLDQTIVSTAMP TIVGELGGVDHQVWITTAYLLATTIVMPIYGKFGDVLGRRNLFLAAIAIFTLASVGCA FAGDFWSFVVFRAAQGLGGGGLMILSQSIIADIVPANQRGKYLGPLGGIFGLSAVGGP LLGGFFVDHLTWQWAFYINIPIGIAAFVVAFITLTLPSKRATKRIDVVGVVLLSMATT CLIFFTDFGGDKAYGWGSLATWAWGLGLVVAASLFVFTESRADDPVIPLSLFRNPVFV NATAIGLALGIGMFAAIGFVPTFLQMSTGTSAAVSGLLLLPMMVGLIGMSITSGILIS RTGRYRIFPIVGTLLTMLALVLMTSLTAETPVWLICVFLFIFGLGLGLIMQVVVLVVQ NAVPAAQIGTATSTNNYFREVGAALGTAVFGTLFTTRLTENLTTVFAGAGAAPGDAAA SASSIDPQALNQLPDAVRDGIVDAYADALAPVFWYLVPFIGIAFVLSLVLKQIPLSDV AGLVARGEAVGGEEAERLEAEQRADVRGGTSPAQATGPDAADEASRIAVPSSDARDGS GS" misc_feature complement(order(3049984..3050052,3050191..3050259, 3050317..3050385,3050398..3050466,3050485..3050553, 3050596..3050664,3050725..3050793,3050806..3050865, 3050902..3050970,3050983..3051051,3051085..3051153, 3051163..3051231,3051250..3051318)) /locus_tag="CMS_2892" /old_locus_tag="CMS2892" /note="13 probable transmembrane helices predicted for CMS2892 by TMHMM2.0 at aa 28-50, 57-79, 83-105, 117-139,144-166, 179-198, 203-225, 246-268, 283-305, 312-334,339-361, 381-403 and 450-472" misc_feature complement(3050203..3051399) /locus_tag="CMS_2892" /old_locus_tag="CMS2892" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(3051480..3052190) /locus_tag="CMS_2893" /old_locus_tag="CMS2893" /db_xref="GeneID:6158404" CDS complement(3051480..3052190) /locus_tag="CMS_2893" /old_locus_tag="CMS2893" /codon_start=1 /transl_table=11 /product="TetR family transcriptional regulator" /protein_id="YP_001711526.1" /db_xref="GI:170783192" /db_xref="GeneID:6158404" /translation="MLHSMSRSAMMHFMSTSATGLRERRRVETSARLTTLARRLTAER GLAGFTVEEVCEQAGVSRRTFFNYFASKEDALFGRSARVDTADLEEAFVAAGDPEDPA LSPTLLDDLADLCLERWARLDTDGTSMHDMHAAFRREPGLLVRALEAAMEDEAKDVLL VERREGLPPGDLRASVVVQAMGALGRSSAREFLAPDNVDPIPLILRRRLDALREIAHP PTATTSRTRHTERTPRNP" misc_feature complement(3051954..3052094) /locus_tag="CMS_2893" /old_locus_tag="CMS2893" /inference="protein motif:HMMPfam:PF00440" /note="HMMPfam hit to PF00440, Bacterial regulatory protein, TetR, score 3.8e-10" gene complement(3052229..3052939) /locus_tag="CMS_2894" /old_locus_tag="CMS2894" /db_xref="GeneID:6158405" CDS complement(3052229..3052939) /locus_tag="CMS_2894" /old_locus_tag="CMS2894" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711527.1" /db_xref="GI:170783193" /db_xref="GeneID:6158405" /translation="MTDSASEVGGPRDGPTGAAVPDRPDRGIVQRVVGWLRAGYPSGV PDQDYVPLLGILRRSLTAEELEQVVDQLVDDAVAADAAGEEIGRSRLRERVEAMLLGP AMPEDLVRVSARLAAAGWPLGSPEDLHEPDAAHARATERTGLVSRIVAWLRAGYPAGL PEQDFVPLLALLRRRLSDEEVREVSARLASEGGLPASRLDVADAIAGVTSEMPSDADV ERVRAYLEAHGWPEGFRI" gene complement(3052942..3053253) /locus_tag="CMS_2895" /old_locus_tag="CMS2895" /db_xref="GeneID:6158406" CDS complement(3052942..3053253) /locus_tag="CMS_2895" /old_locus_tag="CMS2895" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711528.1" /db_xref="GI:170783194" /db_xref="GeneID:6158406" /translation="MLPLFFSAVGQVALVALLLGAGLPALFALGVRSFALASPDTSGR VAGSDSSRRTPPIVLQVAGALCYAVVVLAVIAGLTLIIATGLGQSVSFEHVIPTFTSK G" sig_peptide complement(3052942..3053052) /locus_tag="CMS_2895" /old_locus_tag="CMS2895" /note="Signal peptide predicted for CMS2895 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.472 between residues 37 and 38" misc_feature complement(order(3053005..3053073,3053173..3053241)) /locus_tag="CMS_2895" /old_locus_tag="CMS2895" /note="2 probable transmembrane helices predicted for CMS2895 by TMHMM2.0 at aa 5-27 and 61-83" gene complement(3053265..3054482) /gene="pit" /locus_tag="CMS_2896" /old_locus_tag="CMS2896" /db_xref="GeneID:6158407" CDS complement(3053265..3054482) /gene="pit" /locus_tag="CMS_2896" /old_locus_tag="CMS2896" /codon_start=1 /transl_table=11 /product="putative low-affinity inorganic phosphate transporter" /protein_id="YP_001711529.1" /db_xref="GI:170783195" /db_xref="GeneID:6158407" /translation="MDPFILLVLVVVTALAFDFTNGFHDTANAMATSIATGALKPKVA VTLSAVLNLVGAFLSIEVALTVTNAVVKIQDKSGAPDPALLQGGGSALLLIVLAGLIG GIVWNLLTWLLGLPSSSSHALFGGLIGSTLAGLGLNGVNWAGDGSKLDGVVGKVILPA LMSPILAGAVAAVGTWLVFRIIGNLAGRGLDRTFRIGQIGSASLVSLAHGTNDAQKTM GVITLALIAAGGWTDTESVPFWVKISCALAISLGTYIGGWRIIRTVGKGLVEIDTHQG MAAESSSAAVILASSHLGFALSTTHVATGSILGSGVGRPGAQVRWRVALRMVVAWIIT LPAAALVGAVMWWLGHLIGGAAGGIAMTLVLVAVAITVYVRSRKDDVGAHNVNDEWSD EKSARPAAQPADV" sig_peptide complement(3053265..3053351) /gene="pit" /locus_tag="CMS_2896" /old_locus_tag="CMS2896" /note="Signal peptide predicted for CMS2896 by SignalP 2.0 HMM (Signal peptide probability 0.936) with cleavage site probability 0.753 between residues 29 and 30" misc_feature complement(order(3053361..3053429,3053442..3053501, 3053946..3054014,3054057..3054125,3054144..3054212, 3054288..3054356,3054414..3054473)) /gene="pit" /locus_tag="CMS_2896" /old_locus_tag="CMS2896" /note="7 probable transmembrane helices predicted for CMS2896 by TMHMM2.0 at aa 4-23, 43-65, 91-113, 120-142,157-179, 328-347 and 352-374" misc_feature complement(3053457..3054422) /gene="pit" /locus_tag="CMS_2896" /old_locus_tag="CMS2896" /inference="protein motif:HMMPfam:PF01384" /note="HMMPfam hit to PF01384, Phosphate transporter,score 1.2e-76" gene 3054610..3055188 /locus_tag="CMS_2897" /old_locus_tag="CMS2897" /db_xref="GeneID:6158869" CDS 3054610..3055188 /locus_tag="CMS_2897" /old_locus_tag="CMS2897" /codon_start=1 /transl_table=11 /product="putative acetyltranferase" /protein_id="YP_001711530.1" /db_xref="GI:170783196" /db_xref="GeneID:6158869" /translation="MPAIPTDAPPAPPAVELVPVDVERDREALRAFLTSNAFPFHVRP APTTADVDARIADGDFQGPEHEALWVEVAGSGRVGLVVLDDLEDPGVLFDLRLAESAR GRGLGVPVVRAMTEHVFRTYPHVTRFEAQTRDDNRAMRRVLVRAGFVKEAHYRDGWPV AGGEPRASVGYAVLRRDHESGTTTPVPEDNEA" misc_feature 3054814..3055056 /locus_tag="CMS_2897" /old_locus_tag="CMS2897" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 2.1e-05" gene 3055326..3056747 /locus_tag="CMS_2898" /old_locus_tag="CMS2898" /db_xref="GeneID:6158408" CDS 3055326..3056747 /locus_tag="CMS_2898" /old_locus_tag="CMS2898" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711531.1" /db_xref="GI:170783197" /db_xref="GeneID:6158408" /translation="MSSAAATAAVIGEPEVVEDVTRVASSPAWLALKDATVALQPMQA KDGSVPDAAHHAEAARLVAVIRDSVRALAPLFPHDAAYLAALDVDFARWVDQGLGVPD FLDSLNAFQPQRDRVDGIRHLVVFPMTTQNGSASRLVEAVLIEVVWPEFVAELEAGEY GNALFVPIRFVDFTPGYDTNSAVLFPETVAMREIPTFTWGAIFADREAARFRRVVRHA AEVTKLELPEDARRLLDDQRLAEETFVMWDLIHDRTHMRGDLPFDPFMIKQRMPFFLY SIEELRCDLTAFREAVAIQRRLAAMDPAERTPGDDALLERAGLVQHAVIFDRIFRFAI TGSRVRNYDGLGGQLLFAWLHQHHVLHWTDTRLTIDWDDVADVVVALADRVNDLYWRS IDRPKTAHWLAAYAMVTETVTPHPASTWAKGPDALPLDGPPKGLTDLVLDDEFPLSMF FEALEKKMRDVIGSTAGITGQTA" gene 3056744..3057373 /locus_tag="CMS_2899" /old_locus_tag="CMS2899" /db_xref="GeneID:6158409" CDS 3056744..3057373 /locus_tag="CMS_2899" /old_locus_tag="CMS2899" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711532.1" /db_xref="GI:170783198" /db_xref="GeneID:6158409" /translation="MSVDGRVVVVAGASSAAGRAVAAELTAAGARVVAVGTDAGRLAD VDAERLEVCDLADHAAVVDLAARIRADLGGVDGLIHLVGGWRGGNGLEGQTDDDWDFL HERLVTTLRNTTRAFDADLQASEAGRLAIVSSTAVQRPYPGGANYSTAKIAAETWVRA VDRGFSKAGSPARTTIFVVKALGGLERALARRVVGLWTTVPPERDLIEA" sig_peptide 3056744..3056833 /locus_tag="CMS_2899" /old_locus_tag="CMS2899" /note="Signal peptide predicted for CMS2899 by SignalP 2.0 HMM (Signal peptide probability 0.927) with cleavage site probability 0.355 between residues 30 and 31" misc_feature 3056765..3057367 /locus_tag="CMS_2899" /old_locus_tag="CMS2899" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 5.7e-06" gene 3057462..3058367 /locus_tag="CMS_2900" /old_locus_tag="CMS2900" /db_xref="GeneID:6158410" CDS 3057462..3058367 /locus_tag="CMS_2900" /old_locus_tag="CMS2900" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711533.1" /db_xref="GI:170783199" /db_xref="GeneID:6158410" /translation="MVTPHARTAEHDAFGPWIDTVRTTDEVPRLYRPHGVDPFAARLV LKVPRDIPRRDTDPTMDLYDHLLVVGDRDLEVLSRDGSAYTARRIPFADIVAVRDRVD LLDGLLAVHTADGQALRIPFNGASAEVVVELTELLMTLAADSAGVPATCPKKTARATP RIDVGQDEAGVAAAYWDLAARDPELRYLSSRPRTPLVSTADGLMGALQHLRPMSLAGA VAACSPRELLILTRRDQVVRRRTATLSIARLRILRHAISSTTAEPHPRWVGMSTVTIR AGAASFEVVAASADELECDLVTGGS" gene 3058373..3058912 /locus_tag="CMS_2901" /old_locus_tag="CMS2901" /db_xref="GeneID:6158411" CDS 3058373..3058912 /locus_tag="CMS_2901" /old_locus_tag="CMS2901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711534.1" /db_xref="GI:170783200" /db_xref="GeneID:6158411" /translation="MTDAVILTGTVGAGKTTTMHALGALLAARGVPHALVDADALRLL HPAPADDPFHQELMLRNLGDLSRNHREAGARVVVVAAVVERADDLPAYAAALGSHEPL LVRLTVDADAVRARLDARHGEDDAALAWHRARAPELAAIIDAAGLGGLAIDTTSHSPA DVAALVADRAGWWARPRVE" misc_feature 3058397..3058420 /locus_tag="CMS_2901" /old_locus_tag="CMS2901" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 3058912..3059217 /locus_tag="CMS_2902" /old_locus_tag="CMS2902" /db_xref="GeneID:6158412" CDS 3058912..3059217 /locus_tag="CMS_2902" /old_locus_tag="CMS2902" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711535.1" /db_xref="GI:170783201" /db_xref="GeneID:6158412" /translation="MSDDLPLDFTAPLWAWEARRELWTFVSLPVELGGMLRELGEAGR RGFGSVPVRVRVGTTTWRTSVFPQGDGTWVLPIKRAVRDAQGLEVGAPVYVDLEPMP" gene complement(3059230..3059589) /locus_tag="CMS_2903" /old_locus_tag="CMS2903" /db_xref="GeneID:6158413" CDS complement(3059230..3059589) /locus_tag="CMS_2903" /old_locus_tag="CMS2903" /codon_start=1 /transl_table=11 /product="putative drug resistance dioxygenase" /protein_id="YP_001711536.1" /db_xref="GI:170783202" /db_xref="GeneID:6158413" /translation="MVDSVATVWLPVQDMTRAVAFYRDTLGLTVTSEDADWSEIDADG LMIGLNAREEASGSSSGGAVISFTPEGSIEDELERIRARGAEITGEISDHEWGRILPF QDSEGNDLQLYSPPVGG" misc_feature complement(3059254..3059580) /locus_tag="CMS_2903" /old_locus_tag="CMS2903" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 7.3e-12" gene complement(3059621..3060583) /locus_tag="CMS_2904" /old_locus_tag="CMS2904" /db_xref="GeneID:6158414" CDS complement(3059621..3060583) /locus_tag="CMS_2904" /old_locus_tag="CMS2904" /note="Nu" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711537.1" /db_xref="GI:170783203" /db_xref="GeneID:6158414" /translation="MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(3059633..3060175) /locus_tag="CMS_2904" /old_locus_tag="CMS2904" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-38" gene 3060885..3062570 /locus_tag="CMS_2905" /old_locus_tag="CMS2905" /db_xref="GeneID:6158415" CDS 3060885..3062570 /locus_tag="CMS_2905" /old_locus_tag="CMS2905" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711538.1" /db_xref="GI:170783204" /db_xref="GeneID:6158415" /translation="MSKRQVLESLSGLLLGMFVSILAGTVVSTSLPIIISDLKGDQSG YTWVVTATLLATTVSTPLWGKFADLFNRKLLIQLALGVFVLGSALAGFSQNTETLIAF RVLQGLGAGGLAALSQIIMADIISPRDRGRYAGLFGAVMAVGTVGGPLLGGVVTDAFG WRWNFFIALPIAIIAIILLQVTLHLPQHPKRKVHVDYLGAVFIASGVSLLLIWVSQAG TQFEWASGTSYLMAGGAVVLLIAAVITELKVSEPIIPLTMFRNRTFTLSVLASLAVGI SLFGTSVFLAQYMQLSRGATPTQSGLLTIPLMAGLLISSTVFGTLISRRGKWKAIMIS GAVLIVAGTSLLSTLRYDTDFLLVGIYMFVLGAGLGMLMQNLVLVVQNAIEVKNLGVA TSAVTFFRSLGGTIGVSVLGSILGTIIASEITAGITKLAPADQAAAAQALGSGVIPQV SQLSPAVRTVVESAYGVGIGDVFLYSVPLAIVSLLAVIFLPNAQLGSKNAVQLKSDRT AAPEARDVHRTDAEDALIGASAGAVALAPAGEANPTGSIRLPEAENAGADSRR" sig_peptide 3060885..3060968 /locus_tag="CMS_2905" /old_locus_tag="CMS2905" /note="Signal peptide predicted for CMS2905 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.625 between residues 28 and 29" misc_feature order(3060921..3060989,3061017..3061085,3061104..3061163, 3061176..3061244,3061281..3061349,3061359..3061427, 3061461..3061529,3061557..3061616,3061674..3061742, 3061785..3061853,3061872..3061925,3061953..3062021, 3062076..3062144,3062286..3062354) /locus_tag="CMS_2905" /old_locus_tag="CMS2905" /note="14 probable transmembrane helices predicted for CMS2905 by TMHMM2.0 at aa 13-35, 45-67, 74-93, 98-120,133-155, 159-181, 193-215, 225-244, 264-286, 301-323,330-347, 357-379, 398-420 and 468-490" misc_feature 3060921..3062132 /locus_tag="CMS_2905" /old_locus_tag="CMS2905" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene 3062567..3063133 /locus_tag="CMS_2906" /old_locus_tag="CMS2906" /db_xref="GeneID:6158416" CDS 3062567..3063133 /locus_tag="CMS_2906" /old_locus_tag="CMS2906" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711539.1" /db_xref="GI:170783205" /db_xref="GeneID:6158416" /translation="MTDEDRSPGGDAPGVAAGIAEVEEQMTALAARIRATTREAAAAI HPELPPIGYKMLRVIRRCGAAHASAVADQLGVDRSVVSRQLRQLQDLGLVEVGADAQD GRVRVLALTAAGRAGVEADDAQGGSRLIRGLGGWSRADLDAFAGYLARLNAGADAGVD VAAGPGSAPGAAACPADPVPTNPGARAA" misc_feature 3062708..3063019 /locus_tag="CMS_2906" /old_locus_tag="CMS2906" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 8.6e-11" gene complement(3063154..3063903) /locus_tag="CMS_2907" /old_locus_tag="CMS2907" /db_xref="GeneID:6158417" CDS complement(3063154..3063903) /locus_tag="CMS_2907" /old_locus_tag="CMS2907" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711540.1" /db_xref="GI:170783206" /db_xref="GeneID:6158417" /translation="MDRDRISDLAHADHPIASPLGDDSVDRLLAAAVTGQGAVLDLGC GDGSWLLRALRLEPSLTAVGVDHSDAGFGRVREQAEREGLSNRLELVCADARLWTSYD GFDVVLSVGATHAFGGLEPTLSAIDGHLRAGGRALVGECFWERTPTPRVLDLLGSELD DYRDLAATVELAATNGWVPLQGHVSTLQEWDDYEWSWTGALARWALDHPDDPDGDQVM AASVEHRRAWLEGYRGTLGFLTLLLGRPPAS" gene complement(3063978..3066490) /locus_tag="CMS_2908" /old_locus_tag="CMS2908" /pseudo /db_xref="GeneID:6158418" misc_feature 3064035..3066519 /note="submitted with no further information" gene 3065098..3066003 /locus_tag="CMS_2909" /old_locus_tag="CMS2909" /db_xref="GeneID:6158419" CDS 3065098..3066003 /locus_tag="CMS_2909" /old_locus_tag="CMS2909" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001711541.1" /db_xref="GI:170783207" /db_xref="GeneID:6158419" /translation="MSPLSSRPRLRLHRRRHGHAGASTTSPRTTPHTRRWTRALVVLA AVSALILSSPVSAANAAPPLNPDRIRLPIVAGTKLNGDAGSCTAGAVLQYDFYQLLPA GFAAKATRYVVTAKHCFAVGEIVRVGGVPVGHVIEQAEHADLELVEIDAKLDPSAGLH CATHGSHPAFCAHNYYVPRATGEIITNSGGHPRRMPVEGHTEAPAGRFCTSGYFTGVQ CDWTSFRGPEPQPSHGDIHSLKAAESPVLGTTDAGDSGGPVYTYDRELIGINSQSAYF GSILFYVPFSFVFSNFPGYSLATNR" sig_peptide 3065098..3065277 /locus_tag="CMS_2909" /old_locus_tag="CMS2909" /note="Signal peptide predicted for CMS2909 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.683 between residues 60 and 61" misc_feature 3065212..3065280 /locus_tag="CMS_2909" /old_locus_tag="CMS2909" /note="1 probable transmembrane helix predicted for CMS2909 by TMHMM2.0 at aa 39-61" misc_feature 3065842..3065877 /locus_tag="CMS_2909" /old_locus_tag="CMS2909" /note="PS00135 Serine proteases, trypsin family, serine active site." gene complement(3066591..3068555) /locus_tag="CMS_2910" /old_locus_tag="CMS2910" /db_xref="GeneID:6158420" CDS complement(3066591..3068555) /locus_tag="CMS_2910" /old_locus_tag="CMS2910" /codon_start=1 /transl_table=11 /product="putative surface-anchored protein" /protein_id="YP_001711542.1" /db_xref="GI:170783208" /db_xref="GeneID:6158420" /translation="MALVLSAIALPADVAGAASREPAVTSVASGSISAAAKPAVPFTA SPEPTITGKPLVGQILTAVPGAWKPVGAAFAYQWFSGDTAIPGAKGRTYTLAAKDLSR TIRVRVIATRTGSITMERLSQPTAAVTLPAFRTAPVPTLVGTVAVGFLLTVRPGGWNP APAFSYSWSRDGVLIAGAAAATYRLAPGDAGSRITASVTGSRTGVQTLTMKSAASKAV APAPVPKPTPVPTITPTAKPTVAPTPVPTVAPTTAPVPTPVPTVAPIPTPAPTTAPVP TPAPTPPVAPTTTAPRIVGQLTVGSAVRALPGDWTPTSTPLRYRWYLDGVTQPGQTGP TLRLDDAALGKRITVTVTGSWAGSADVHRSTASATAPVTAVAGAQDGVGHDVVAILGQ SNAQGGGFGYDPAIDVAQDGLDQLVGDWQDKDWGRVVPAEDSLKHVTTWRMTDRPKLV GPGMTFGRALLADSAPGRRVLLVPAAQGSTSLTRVDAVQKFTWDPSPEQGSVEAGLTN LYANATTQIDNALALDPDNRLVAIIWAQGESDANAISSAPTAAGRVAAKVKYADRLLE LESGLAVRYGPVPFLVGGMVPEWIGSDAARQDIDAVHQGLRSLRKEVAYVPGVSGHAN EGEAFIHYDAVGARMMGAGFYAAYLRQTGR" sig_peptide complement(3066591..3066641) /locus_tag="CMS_2910" /old_locus_tag="CMS2910" /note="Signal peptide predicted for CMS2910 by SignalP 2.0 HMM (Signal peptide probability 0.979) with cleavage site probability 0.351 between residues 17 and 18" gene 3068826..3071936 /locus_tag="CMS_2911" /old_locus_tag="CMS2911" /db_xref="GeneID:6158421" CDS 3068826..3071936 /locus_tag="CMS_2911" /old_locus_tag="CMS2911" /codon_start=1 /transl_table=11 /product="putative surface-anchored protein" /protein_id="YP_001711543.1" /db_xref="GI:170783209" /db_xref="GeneID:6158421" /translation="MTTARRRALVGLLSLALVASAQAGMATSAIAAPAPVGTDAVGTT AVTFTTAPQPSITGTAQVGSTLFAVTGTWAPQPDSFTFKWWSDGVAISGATGSAYTLV AADAAKKITLTVTANKAGYTSLAKSSAATATVAAAPAPAAFTTIPTPTITGTPKVGTP LTAATDTWAPVPTTFSYRWFVANVAVTGATTSTYTPVAADVGKRITVTVTGSRTGYTT AAKTSAASAAVVAAPVTTPSTFTTVPTPTITGSAQVGATLTATPGTWAPVPTTFSYRW FVANVAVTGATASTYVPIAADLGKRITVTVTGARSGYTQASKTSAASAAVVAAPVTSP STFTTVPTPTIVGTAQVGATLTAAPGTWAPVPTTLSYRWFVANVAVTGATASTYVPVA ADLGKRITVTVTGARSGYTSAAKTSAGTAAVIAAPAAKAFAIASAPTVTGSASVGGVL TASTGTWSPAPAFTYQWTVGTTAITGATGSTYTVGTADLGKTITVTITAKLAGYVTTS KTSVATAAVGKPAIASTQPVIVGDAKVGYTLRVVPGLWTPKPSFSYVWYANDVKIAGA TSNDFVVTTAELGKRITATVVGTASGFSNTARTSARTAAVVAENVQLPQQPWYSTVTG GVYLDSVRPENLITDGYIEVTDPDYGWDKAGTQFTGGSFAITGLRAGEYSLRAYVEVA GEYIEQYLGPTRDYRAAQTFAVQADGTVRIDMVVKRAATVSGTVTAADGSPVENALVT VTGATEDDWYGGSAYTDYFGRFTVRDIQPGTYKVQYSAPSPNPSGLTGEWYGDADDES SATVVTVANWSQTVIGINAVLDVGARMTGWIYDSNYASVADATVYVVPVSSAVEGTTP YSARHVQTDASGDFEMTGIVPGDYYIYVSATRYSAPALAAQWVGGTGTLATASVYRAT RGTQMSSVYAQLAVSPSVTTTVTGLAAAGWDSDYAVVNLYQGGSIKYSEYSWYGAAAF IKDIAPGTYQVAVTYHRGTELKAYWWNGGTYADRSEIVVRAGDSISIVAKAITRVAPA GARLVR" sig_peptide 3068826..3068918 /locus_tag="CMS_2911" /old_locus_tag="CMS2911" /note="Signal peptide predicted for CMS2911 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.773 between residues 31 and 32" misc_feature 3068850..3068918 /locus_tag="CMS_2911" /old_locus_tag="CMS2911" /note="1 probable transmembrane helix predicted for CMS2911 by TMHMM2.0 at aa 9-31" gene 3072103..3073911 /locus_tag="CMS_2912" /old_locus_tag="CMS2912" /db_xref="GeneID:6158422" CDS 3072103..3073911 /locus_tag="CMS_2912" /old_locus_tag="CMS2912" /codon_start=1 /transl_table=11 /product="putative surface-anchored protein" /protein_id="YP_001711544.1" /db_xref="GI:170783210" /db_xref="GeneID:6158422" /translation="MHAPRRRALIGLLSLSLVLSAQAGLAGAATAADAPTATSTSTSR ATPAFTASPKPTISGTPRVGSTLTAVTGDWAPKPTTFGYRWWRDGVAIAGATGSTLKL TAADAGARINVTVTARRGGYASLARSSGPTAAVAPATTTPPPPAPTPTPTAPTPDPAP TTDPTPAPTPDPTPPAATAPFSEASVPVITGDVQVGRPLRAVAGLWTPRPTSFAYAWS VNGVAIAGAISISYTPVDADAGKRITASVTGTAAGITPTTRTSAPTSPVAAAGVDLPE QPSTGKVVGNVYLGSVDPANVIPYAAIYLEDAAAEGSSTDDPAAEIIDGAYSFSGVRP GEYRMHVFYAVDGTYYYQYYGQTKEADRAQTFAVSADGTVHVDVVLKRYATIEGTVTT TGGVPASGLSVTAIRASDGKPVDSETTDAQGRYILRDVEPDDYLLRVSPPVADSRGFI GEWYSDAYDQASATPVTVTRWGAPLTGIDVQLSRGASAKGQVYRVDGVGSSGSSVRFV PVGSAVDGVRPTVGLVAYTDRYGRFSLDGITPGEYVVYVTGPAQQARWAGGTGSLATA TRYTATLDGQLPAIYVQFGADPTARSLTSRTAAAAR" sig_peptide 3072103..3072195 /locus_tag="CMS_2912" /old_locus_tag="CMS2912" /note="Signal peptide predicted for CMS2912 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.421 between residues 31 and 32" gene 3074005..3074751 /locus_tag="CMS_2913" /old_locus_tag="CMS2913" /db_xref="GeneID:6158423" CDS 3074005..3074751 /locus_tag="CMS_2913" /old_locus_tag="CMS2913" /codon_start=1 /transl_table=11 /product="putative surface-anchored protein" /protein_id="YP_001711545.1" /db_xref="GI:170783211" /db_xref="GeneID:6158423" /translation="MPSVRRRGLVGLISLALIAAAQAGPASPASADPAPSARVAADAT TAIVVGRVYLDRVDPRNLVRDGSISLELSGIPFGENVDIVDGSFRFESQPATRYTLHA FLTVGGAEVSQYLGQVNEWQDARFFTAPAGRTTRVDVVLRTPASIGGTVMLPEGAPAG YSPVDVLRATGDGRLEASGTTDEAGRYTIENLEPGFYVLRFGVPPGDPTSYGAVWSGD RTQRAQAKRIVVSQWGQVVTGVDATLAPAR" sig_peptide 3074005..3074097 /locus_tag="CMS_2913" /old_locus_tag="CMS2913" /note="Signal peptide predicted for CMS2913 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.777 between residues 31 and 32" gene 3074859..3077111 /locus_tag="CMS_2914" /old_locus_tag="CMS2914" /db_xref="GeneID:6158424" CDS 3074859..3077111 /locus_tag="CMS_2914" /old_locus_tag="CMS2914" /codon_start=1 /transl_table=11 /product="putative surface-anchored protein" /protein_id="YP_001711546.1" /db_xref="GI:170783212" /db_xref="GeneID:6158424" /translation="MSSVRRRAVVGLVSLALVASAQVGIASGASAATAPAPTPAGSAA ATAATPAALVFTASPTPTVRGTTEVGATLTAVTGTWTPTPGTFLYRWARDGVAIPGAT RATYALVAADQGKRLTVSVTAVKTRYPSTTRTSEPTTAVAPKGGAPEVRLPFTAAPVP TITGSVTVGGTVTAVPGSWSPSPRLAYQWFAGSTAIRDANVATYEPTAADLGQELSVS VAAFRDGYATTTRMSAGAIVSEGTFPERTFVIRGEARVGGYLDVANETYSYEADRTYT WAADGVTIAGETSDGYRPVVADIGKRITATITGSAAGFTTETRTTTPTAPVVAADAAP VVETGVVSGRVFLGSATDANLLGDGIVSASRVSDGTGRDGRLVDGSFEVRDLGPGVYT LSVFTEVDGVYASQPYRAPGDPARATRFTVTNDGAVRLDVVLVRHASISGTVTQSDGQ PAVGSNVEVFPVRGGEPVGGGRTDAAGRFRISSEWLTPGQYEVRFGAPFENPEGYIGE WYGDTDDRNRAKRITVVGTDAVTGIDAELTRGSRLEGVLQAGAAGEESSAVYLVPETA ALLGSGPRSGRLTGVDQSGRFSLTQITPGRYYVYAQTTRYEAPSYGPQWVGGTGTLAT ATVFTVRRGADLPFLDIRMKQDSSVTVVLAGVTAPGWEQRAIVELLQDGVVVKQYGVI PGSSTFIPNVAPGTYRVRVSHIRDGVWIPTWWAGGTGADRSRIVVNVDRSVRIAVRAA TGTEPPAQAR" sig_peptide 3074859..3075029 /locus_tag="CMS_2914" /old_locus_tag="CMS2914" /note="Signal peptide predicted for CMS2914 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.275 between residues 57 and 58" gene complement(3077244..3077666) /locus_tag="CMS_2914A" /old_locus_tag="CMS2914A" /pseudo /db_xref="GeneID:6158425" gene complement(3077678..3080116) /locus_tag="CMS_2915" /old_locus_tag="CMS2915" /db_xref="GeneID:6158426" CDS complement(3077678..3080116) /locus_tag="CMS_2915" /old_locus_tag="CMS2915" /EC_number="4.1.2.-" /codon_start=1 /transl_table=11 /product="putative phosphoketolase" /protein_id="YP_001711547.1" /db_xref="GI:170783213" /db_xref="GeneID:6158426" /translation="MASDTAPRDPSAPLYLDVVDGWWRAANYLSVGQIYLLDDPLLER PLTRDDIKPRLLGHWGTTPLLNFVYAHLNRAIIERDLDMIYIAGPGHGGPGMVANAYL DGTYSELFSAATPDREGLRHLFRQFSFPGGVPSHAAPETPGSINEGGELGYSLVHAYG AALDNPDLVVSCVIGDGEAETATLAASWHLDKFLDPETDGAVLPILNLNGWKIANPTV LARIPEEELLALFTGYGYSLRIVSGGFDGEDHAAVHERFALALGDALDEISRIQLAAR TGGSDERPAWPMLILRTPKGWTGPKEVDGKQVEGTWRAHQVPLSGVRDDPDHLRQLQE WMESYRPHELFDRDGRLTPALQPNRPEGDRRMSANPHANGGLLRRDLRLPPLEVNAVD LSDGRGVIAEPTRVLGGWLRDVIARNPLDFRIFGPDETASNRLDDVYEVTAKAWQGEV LPVDEHLAHEGRVIEILNENITQGLLEAYLLTGRHGIFTSYEAFIHIVDSMFNQYAKW LESSSKVEWRRPVASFTYLLSSHVWRQDHNGFSHQDPGFLDHVVNKRAEIVRVYLPFD ANSLLVTMDHCLRGTDLINVVVAGKQPTASLLSLEEARAHGARGVGVWEWAGTEVPGL EPDVVVACAGDIPTVEAMAAVQILKREIPQLRVRFINVVDLMRLQDSTQHPHGLDDGS FDALFTRDKPVVFAFHGYPSLIHRLTYKRHNHENMHVRGFVEQGGTTTPFDMLMLNDL DRFRLVMDVIRRVPHLETTYAGLSQRMDDERIAHRVHTRQYGEDMPDVSGAEGLPFAD PSRQVAIDSGDDNA" misc_feature complement(3077732..3080089) /locus_tag="CMS_2915" /old_locus_tag="CMS2915" /inference="protein motif:HMMPfam:PF03894" /note="HMMPfam hit to PF03894, D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase, score 0" misc_feature 3080185..3082723 /note="submitted with no further information" gene 3080964..3081287 /locus_tag="CMS_2917" /old_locus_tag="CMS2917" /db_xref="GeneID:6158427" CDS 3080964..3081287 /locus_tag="CMS_2917" /old_locus_tag="CMS2917" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711548.1" /db_xref="GI:170783214" /db_xref="GeneID:6158427" /translation="MRRDRGDGAGVGVSDAFPQISSPAASLSEPLPPAPLPPHLLVEP HRDEDVDDRAEVALLQERLHRIAVVGGGCVDHILQLGGARRRATGTSLRARRRRRILV VPATP" gene 3081387..3082679 /locus_tag="CMS_2918" /old_locus_tag="CMS2918" /db_xref="GeneID:6158428" CDS 3081387..3082679 /locus_tag="CMS_2918" /old_locus_tag="CMS2918" /note="N/I/C ISLxx5" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi3 transposase" /protein_id="YP_001711549.1" /db_xref="GI:170783215" /db_xref="GeneID:6158428" /translation="MVGVSRNTAYGWARTAGVRGRGKSGTAGHPGRGEYERLRVEGMS RRVAASRVGVHERTAQDWDRGWMKRGSVRIHADGRRIEYNTGMATITGPRLPAVDAVL HPRFLTVIERETIADLRRQDLSLRAIGRVLGRPASTIKRELDARTVAGTYQPHAAHRA WAASRSRPKRAKLAQDGPLRDYVARKLMLRWSPEQISRLLVREFPGEESMRVSTETIY QAIYVQARGGLRREVADALRTGRTRRRPRTRPEHRTQRFVDPMVMIADRPAEIEDRAV PGHWEGDLIVGTSSQSAIVTLVERTTRYVMLGHLPGGHTAEEVRDVLVPLISTLPAHL RGSLTWDQGAEMASHRQISIQAGIPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLA AHTSADLEHVAQQLNGRPRKTLDWDTPAERMRALLTTI" misc_feature 3081435..3081458 /locus_tag="CMS_2918" /old_locus_tag="CMS2918" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 3082200..3082658 /locus_tag="CMS_2918" /old_locus_tag="CMS2918" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.8e-28" misc_feature 3082497..3082547 /locus_tag="CMS_2918" /old_locus_tag="CMS2918" /note="PS01043 Transposases, IS30 family, signature." gene complement(3082754..3083632) /locus_tag="CMS_2919" /old_locus_tag="CMS2919" /db_xref="GeneID:6158429" CDS complement(3082754..3083632) /locus_tag="CMS_2919" /old_locus_tag="CMS2919" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711550.1" /db_xref="GI:170783216" /db_xref="GeneID:6158429" /translation="MTGTERNTTTPTRGLVLGGGGVAGIAWETGLLSGLLAAGIDLGA ADTVVGTSAGSVVAINLRAGAIAAAYDEHFVDVAGMAEPMGSRDLARTVEVIGEGIAS TAGEIPTRQRIGELALEEYDPEVDDAASVERIGQLLPIRDWPEQDLRITAVDAGTGRF TVFDKASGADLVRASAASCAVPGVFPPVTIDGRPYMDGGMRSGTNADVVADHERILVI VCGPEAPQSGMGPTLSTVVTQLRGRADVLVIQADAESTAAFGENSLLLSTRTASAEAG RRQGERLAEEVRAFWG" misc_feature complement(3083003..3083590) /locus_tag="CMS_2919" /old_locus_tag="CMS2919" /inference="protein motif:HMMPfam:PF01734" /note="HMMPfam hit to PF01734, Patatin, score 1e-21" gene complement(3083764..3084201) /locus_tag="CMS_2920" /old_locus_tag="CMS2920" /db_xref="GeneID:6158430" CDS complement(3083764..3084201) /locus_tag="CMS_2920" /old_locus_tag="CMS2920" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711551.1" /db_xref="GI:170783217" /db_xref="GeneID:6158430" /translation="MLGLAAGFERRLGGVLDVNPTDMKAMEHLIQAGSLSPTELAGRL GISTAAATLVVDRLVEVGHVDRRPHPHDRRRVVVVPRPASVGRAMAELMPMIGGVARA ADALTDAERAAVTRFLGEVREVYREAAAGPAGSGAAAEPPDGR" misc_feature complement(3083839..3084150) /locus_tag="CMS_2920" /old_locus_tag="CMS2920" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 1.7e-09" gene 3084396..3086378 /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /db_xref="GeneID:6158431" CDS 3084396..3086378 /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711552.1" /db_xref="GI:170783218" /db_xref="GeneID:6158431" /translation="MRSIARFVSSRRTAWMALVAAAVAVAALFALLPKGEADAFPPSG LPESSQARQVSELLERFPSADTTVGILVFSRDGAALTEADTAAIGQRAEALAADSIAP QAVVPQVSDDGTAALVAVPLDASDATDDVAGTAGALRATAAEGLPDGLVAQLTGPVGF QADISNAFAGADFRLLLVTVLVVAVLLIVTYRSPVLWIVPLVAVGVADGLARVVVTAL AEPLGITIDASIGGILSVLVFGAGTNYALLLVARYREELTRQEDRHAAMLTAVTSAGP AIAASGGTVALSLITLLLAELSGNRALGFACAIGVLIAIAAALLVLPAALVVCGRGLF WPFIPRAGTDADHGGKPGVWRRLGLRVRRRPAVVAAAALAGVGVLALGLVGARVGLSQ TDQLLGDPESVAAQEVVDASFSAGLTAQTVMLAPDAVAADAVATAESIPGVASARAGE SAEGRTRIDVQLDAEPESTAAFAAVQDLRDAYADAPGAESTTLVGGSDATAADTAASS ERDQGLIIPIILAIVFVILGLLLRSLVAPVLLIASVLATFFASLGAANVLFQQVLGFP AFDANVVLFAFLFLVALGVDYNIFLVTRAREERRLHGTREGMVWALASTGGVITSASA YASPSGRSPGPSPRRRSSSAPTTSAPPQTRSAFDGK" sig_peptide 3084396..3084512 /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /note="Signal peptide predicted for CMS2921 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.611 between residues 39 and 40" misc_feature order(3084432..3084491,3084894..3084962,3084981..3085049, 3085077..3085145,3085206..3085274,3085317..3085385, 3085491..3085559,3085935..3085988,3086007..3086075, 3086103..3086171) /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /note="10 probable transmembrane helices predicted for CMS2921 by TMHMM2.0 at aa 13-32, 167-189, 196-218,228-250, 271-293, 308-330, 366-388, 514-531, 538-560 and 570-592" misc_feature 3084717..3085049 /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /inference="protein motif:HMMPfam:PF03176" /note="HMMPfam hit to PF03176, MMPL, score 3e-18" misc_feature 3085740..3086069 /locus_tag="CMS_2921" /old_locus_tag="CMS2921" /inference="protein motif:HMMPfam:PF03176" /note="HMMPfam hit to PF03176, MMPL, score 2.4e-13" gene 3086610..3087060 /locus_tag="CMS_2922" /old_locus_tag="CMS2922" /pseudo /db_xref="GeneID:6158432" gene 3087417..3087956 /locus_tag="CMS_2923" /old_locus_tag="CMS2923" /db_xref="GeneID:6158433" CDS 3087417..3087956 /locus_tag="CMS_2923" /old_locus_tag="CMS2923" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001711553.1" /db_xref="GI:170783219" /db_xref="GeneID:6158433" /translation="MRVIARAVDAATEAGIPVVVVQHDSGAGAPVFDPTTDAFRLHPE LESRRTDAWKAVTKSKGSVFAGTDLVEWVRAEGVDTITLVGYMTNNCILASSVEAEGL DIAAEVLSDATGAIAIANAAGSVDAATVHGTLMALLHSNFAAVATTDAWIAAVASGDA LPKDGLATSAMAGAARSAG" misc_feature 3087417..3087824 /locus_tag="CMS_2923" /old_locus_tag="CMS2923" /inference="protein motif:HMMPfam:PF00857" /note="HMMPfam hit to PF00857, Isochorismatase hydrolase,score 0.00013" gene complement(3087965..3088690) /locus_tag="CMS_2924" /old_locus_tag="CMS2924" /db_xref="GeneID:6158434" CDS complement(3087965..3088690) /locus_tag="CMS_2924" /old_locus_tag="CMS2924" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711554.1" /db_xref="GI:170783220" /db_xref="GeneID:6158434" /translation="MTFRYAPEPEPTAPRERKSFNGVGLAALIVGVLSLVGSVIPILN YVSGFLAVVGIVLGIVGLILRDRPKGMAFGGLILSVVALILSIVLAIVYTAGIVTAIT GAVEESEARSSAGAADDVRFTYELEGTGGTTSAAAVWVTSVGGSLGTEQDLAATLPFT REIIVPDSAGFDSASFAISGTVGVDGAATDGSTIDGSTIDGGGIVCRILVGTTVVAEQ TATGTGASVACTATAEQLRDASE" misc_feature complement(3087980..3088066) /locus_tag="CMS_2924" /old_locus_tag="CMS2924" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." misc_feature complement(order(3088412..3088480,3088499..3088555, 3088565..3088633)) /locus_tag="CMS_2924" /old_locus_tag="CMS2924" /note="3 probable transmembrane helices predicted for CMS2924 by TMHMM2.0 at aa 20-42, 46-64 and 71-93" gene complement(3088764..3089882) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /db_xref="GeneID:6158435" CDS complement(3088764..3089882) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /EC_number="1.4.1.1" /codon_start=1 /transl_table=11 /product="L-alanine dehydrogenase" /protein_id="YP_001711555.1" /db_xref="GI:170783221" /db_xref="GeneID:6158435" /translation="MKVGIPTEIKNNENRVAATPAGVHELVRRGHEVLVQEGAGLGSS ITDADYVEAGATIVATADEVWGQADLLLKVKEPILEEYPRMRAGQTLFTYLHLAASRP CTDALVASGTTAIAYETVQLPNRQLPLLQPMSEVAGRLSTQVGAYHLMRAAGGRGILL GGVPGTPKARVVVIGGGVAGEHAAANALGMGADVTIIDLSIPRLRELEIRFGGQVQTR VSSAYEIAAQLKDADLVIGSVLIPGAQAPKLVTDAMVATMKKGSVLVDIAIDQGGCFE GSRPTTHDDPTFAVHDSVYYCVANMPGAVPETSTRALTNATLPYVIALAEKGWKRALA EDPALALGLNVHDGHVTEPHVAAALDMPLTPVAEVLAA" misc_feature complement(3088875..3089438) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /inference="protein motif:HMMPfam:PF01262" /note="HMMPfam hit to PF01262, Alanine dehydrogenase/PNT,C-terminal, score 1.1e-93" misc_feature complement(3089289..3089366) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /note="PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2." misc_feature complement(3089472..3089873) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /inference="protein motif:HMMPfam:PF05222" /note="HMMPfam hit to PF05222, Alanine dehydrogenase/PNT,N-terminal, score 3.9e-81" misc_feature complement(3089793..3089873) /gene="ald" /locus_tag="CMS_2925" /old_locus_tag="CMS2925" /note="PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1." gene 3090050..3090544 /locus_tag="CMS_2926" /old_locus_tag="CMS2926" /db_xref="GeneID:6158593" CDS 3090050..3090544 /locus_tag="CMS_2926" /old_locus_tag="CMS2926" /codon_start=1 /transl_table=11 /product="AsnC family transcriptional regulator" /protein_id="YP_001711556.1" /db_xref="GI:170783222" /db_xref="GeneID:6158593" /translation="MPTKDVRTPEPLDQVDRKLVALLRADARTPNSRLAEQAGIAPST CVTRVRGLVERGVITGFTATIDADAVGVGLQALISIAIRAGARHEMAAFADEMRELAD VVQLFFLGGSEDFIVHIAVRDSDHLRDFVLQHLSAHPAVASTRTSVVFDHHYSGPAVG DPAD" misc_feature 3090155..3090466 /locus_tag="CMS_2926" /old_locus_tag="CMS2926" /inference="protein motif:HMMPfam:PF01037" /note="HMMPfam hit to PF01037, Bacterial regulatory proteins, AsnC/Lrp, score 3.3e-21" gene 3090642..3091604 /locus_tag="CMS_2927" /old_locus_tag="CMS2927" /db_xref="GeneID:6158436" CDS 3090642..3091604 /locus_tag="CMS_2927" /old_locus_tag="CMS2927" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001711557.1" /db_xref="GI:170783223" /db_xref="GeneID:6158436" /translation="MTHANAPFTPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS" misc_feature 3091038..3091580 /locus_tag="CMS_2927" /old_locus_tag="CMS2927" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-41" gene complement(3091601..3092104) /locus_tag="CMS_2928" /old_locus_tag="CMS2928" /db_xref="GeneID:6158437" CDS complement(3091601..3092104) /locus_tag="CMS_2928" /old_locus_tag="CMS2928" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="YP_001711558.1" /db_xref="GI:170783224" /db_xref="GeneID:6158437" /translation="MGPADADVVHRLWTERDARGPASRRIDGDGHPSRDEVRTRLVVQ AEESMRTGIRLLAIERRDEPGMVGYCGLVVGSASVEEQEMAFELLREFHGRGFATEAA HAVVDAARDTGRSRLWATVRRWNAPSFRVLERAGFVDSGRVTADPAHGDSVWMTRDLR DAPADGA" misc_feature complement(3091691..3091933) /locus_tag="CMS_2928" /old_locus_tag="CMS2928" /inference="protein motif:HMMPfam:PF00583" /note="HMMPfam hit to PF00583, GCN5-related N-acetyltransferase, score 5.9e-09" gene complement(3092227..3092766) /locus_tag="CMS_2929" /old_locus_tag="CMS2929" /db_xref="GeneID:6158438" CDS complement(3092227..3092766) /locus_tag="CMS_2929" /old_locus_tag="CMS2929" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711559.1" /db_xref="GI:170783225" /db_xref="GeneID:6158438" /translation="MEDQQHVPDRRDPRGRRAPDAEQRSEALKERIYVTFTALAVTIA TEREAEHATVGGAALTLLLTVVGTLLAVSVAEYIAQMVRDGEVPDRRDVGHILYVCGS SLGVLPAPMAILGLAALGALDLTAALRIIAIVLVATLVLVTLIAVRRLRVGFGVKTLV LAGVAVLGVAVLAVELAVH" misc_feature complement(order(3092245..3092313,3092326..3092385, 3092413..3092481,3092542..3092610)) /locus_tag="CMS_2929" /old_locus_tag="CMS2929" /note="4 probable transmembrane helices predicted for CMS2929 by TMHMM2.0 at aa 53-75, 96-118, 128-147 and 152-174" gene complement(3092776..3093750) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /db_xref="GeneID:6158439" CDS complement(3092776..3093750) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="YP_001711560.1" /db_xref="GI:170783226" /db_xref="GeneID:6158439" /translation="MTDDRLSEVLDLIQVRAVVSGGSAARGRWRIHSAIDEDLKFIAV VVGSARLTADGLDAPIELAEGDVAVLNGRAWLTLEGGSGDGPLTHVDPPAPGTPLRDA DLRDPHADVLIGGRVDLDPVGRELLTSVLPPVAHIDRRSPVGADVRAHVQRISRELAA DRVGSAFAIRQYGQLLVLDIVRASMLDPDVPAGWLRLLADERLRPALAVIHAQPARAW SLDSLARASAMSRSSFAQRFREVAGTTPLAYLIEWRMLLARRELRSGDRRVGELAFAL GYGSESAFSSAFKRHTGEAPVTYRTRIRRPGAEQRVVSAPAGHRPPPA" misc_feature complement(3092848..3092982) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 9.7e-10" misc_feature complement(3092863..3092991) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /note="PS00041 Bacterial regulatory proteins, araC family signature." misc_feature complement(3092998..3093138) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /inference="protein motif:HMMPfam:PF00165" /note="HMMPfam hit to PF00165, Helix-turn-helix, AraC type, score 4.6e-06" misc_feature complement(3093013..3093147) /locus_tag="CMS_2930" /old_locus_tag="CMS2930" /note="PS00041 Bacterial regulatory proteins, araC family signature." gene 3093865..3094590 /locus_tag="CMS_2931" /old_locus_tag="CMS2931" /db_xref="GeneID:6158440" CDS 3093865..3094590 /locus_tag="CMS_2931" /old_locus_tag="CMS2931" /codon_start=1 /transl_table=11 /product="putative short chain oxidoreductase" /protein_id="YP_001711561.1" /db_xref="GI:170783227" /db_xref="GeneID:6158440" /translation="MIALVTGGNKGIGREIAAGLAGLGHTVVIGARDLGRGEEAASAL RAAGGDVGAVALDVTDRASVAAAIEVIRGRHGRLDALVNNAGISHRPGADFAGQVPGS GDVDHVRFVFETNVLGVMAVTEASLPLLRLSDAPRIVNVSSSAGSLAAISDFANADPI ALGYVPSKTAVTALTMMYARGLAAEGILVNAVCPGFVATDLNGFRGVRTPEQGARQAV RMATIAADGPTGTFTDEDGPVAW" misc_feature 3093871..3094581 /locus_tag="CMS_2931" /old_locus_tag="CMS2931" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 3.2e-33" gene complement(3094607..3094798) /locus_tag="CMS_2932" /old_locus_tag="CMS2932" /db_xref="GeneID:6158441" CDS complement(3094607..3094798) /locus_tag="CMS_2932" /old_locus_tag="CMS2932" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711562.1" /db_xref="GI:170783228" /db_xref="GeneID:6158441" /translation="MIAGLVIGLLALLLGALAVVCFRAGSALGIIAGLLLLLVAVATA LFAMLWLSIAASGGLRIPF" sig_peptide complement(3094607..3094693) /locus_tag="CMS_2932" /old_locus_tag="CMS2932" /note="Signal peptide predicted for CMS2932 by SignalP 2.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.608 between residues 29 and 30" misc_feature complement(order(3094640..3094708,3094718..3094786)) /locus_tag="CMS_2932" /old_locus_tag="CMS2932" /note="2 probable transmembrane helices predicted for CMS2932 by TMHMM2.0 at aa 5-27 and 31-53" gene 3094973..3095488 /locus_tag="CMS_2933" /old_locus_tag="CMS2933" /db_xref="GeneID:6158442" CDS 3094973..3095488 /locus_tag="CMS_2933" /old_locus_tag="CMS2933" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711563.1" /db_xref="GI:170783229" /db_xref="GeneID:6158442" /translation="MSDATAPVSPPDLAAAARMWDAYAVAHPQAVAAGPEHTVELFGD HARLADELLGIVLSGRKRATAELVADFLARGDEVPRIGSHWIACDSTGAPRIVIRSTE LRVGPFTSADAAFAHDEGEDDLSLESWRTQHRIYWERVSAARGAVWSASDEIVFERFA VVWPPEHADPR" misc_feature 3095087..3095461 /locus_tag="CMS_2933" /old_locus_tag="CMS2933" /inference="protein motif:HMMPfam:PF06171" /note="HMMPfam hit to PF06171, Protein of unknown function DUF984, score 4.1e-23" gene 3095494..3096423 /locus_tag="CMS_2934" /old_locus_tag="CMS2934" /db_xref="GeneID:6158443" CDS 3095494..3096423 /locus_tag="CMS_2934" /old_locus_tag="CMS2934" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711564.1" /db_xref="GI:170783230" /db_xref="GeneID:6158443" /translation="MGPVAAGTWARLWFAAQAAGGTAWWIAVPTVPAVRVATLGSLDP LPVALLDVPMFVVGSALAAAGIRWAAAVASAWTLLVAVALAAYATVTTEAGIGVVIMA VAALGSLVACALLLVGRLPTRWALIGPLAARPADATAATSRHVLATALQIVVFWGSFL VVAPLAIRWLEMRWRVAVPLPSAALPVGIAVLVLASALGIWSAAAMSTRGGGTPLPAA TATRLVIAGPYRFVRNPMALAGVTQAAAVGLILGSWLVVAYAVIGSSLWNHVVRPGEE ADLEARFGDPFRRYRAAVRCWVPTFPGVPGTPR" misc_feature order(3095527..3095595,3095623..3095691,3095695..3095763, 3095776..3095844,3095926..3095994,3096037..3096105, 3096211..3096279) /locus_tag="CMS_2934" /old_locus_tag="CMS2934" /note="7 probable transmembrane helices predicted for CMS2934 by TMHMM2.0 at aa 12-34, 44-66, 68-90, 95-117,145-167, 182-204 and 240-262" gene 3096447..3097307 /locus_tag="CMS_2935" /old_locus_tag="CMS2935" /db_xref="GeneID:6158444" CDS 3096447..3097307 /locus_tag="CMS_2935" /old_locus_tag="CMS2935" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711565.1" /db_xref="GI:170783231" /db_xref="GeneID:6158444" /translation="MDPMADTEIPTTTFPDGRTAVALAQGTWNMGDEPAARATELDAL RAGLDAGLTAIDTAEMYGSGRSEELVGEAIAGRRDEVFLISKVLPSNASRRGTGEAAR RSLARLGTDRLDLYLLHWRGSHPLADTVAAMQELVEEGLIRGWGVSNLDAVDLDELAA IPGGDAVQTDQVLYNLAQRGPEHDVIPWAGSRRMPVMAYSPLDQGRLATDPTLAALAD PLGVSAGQLALAWVVRQAPHVFATAKAATVAHVAENRAALDLVIPEETLAALDRAFPG PRGAEPLAMY" misc_feature 3096495..3097271 /locus_tag="CMS_2935" /old_locus_tag="CMS2935" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 5.4e-55" gene complement(3097348..3098676) /locus_tag="CMS_2936" /old_locus_tag="CMS2936" /db_xref="GeneID:6158445" CDS complement(3097348..3098676) /locus_tag="CMS_2936" /old_locus_tag="CMS2936" /codon_start=1 /transl_table=11 /product="putative multi anti extrusion protein" /protein_id="YP_001711566.1" /db_xref="GI:170783232" /db_xref="GeneID:6158445" /translation="MPALGALVAEPLFLLTDTALVGHLGSAPLAGLGIASVILQTIIG LLVFLAYATTPTVARRLGAGDRPGAIRAGIDGLWLALALGAVVLVLGLVVADPLVRAV ADTGGADADPAATAAVVDAARTYLGISLAGIPAMLLVIAATGLLRGLQDTRTPLVVAV SGFAANAALNAVLIYGFGFGIAGSAWGTVLAQWGMAAVFVAIAARAARETGTTLRPGI RGVARSAASGGWLLVRTASLRAAILATVAVGAGLGVTGLATLQIALTLFSTVAFVLDA LAIAGQALVGHGLGADDVPRVRAVSRRLVQWGVGLGAILGLLLAALSPLLGPVFTGDA GIHRMLTAVTLVLAIGLPVAGYVFVLDGVLIGAGDARYLALAGLVNLAIYAPALILVA WLTESGTVAGTPALLALWAAFGLVYIGARALTLGLRARGDRWIVTGAARA" misc_feature complement(order(3097396..3097464,3097492..3097560, 3097597..3097656,3097699..3097767,3097804..3097872, 3097885..3097953,3098065..3098133,3098143..3098211, 3098230..3098298,3098395..3098463,3098524..3098592)) /locus_tag="CMS_2936" /old_locus_tag="CMS2936" /note="11 probable transmembrane helices predicted for CMS2936 by TMHMM2.0 at aa 29-51, 72-94, 127-149, 156-178,182-204, 242-264, 269-291, 304-326, 341-360, 373-395 and 405-427" misc_feature complement(3098161..3098673) /locus_tag="CMS_2936" /old_locus_tag="CMS2936" /inference="protein motif:HMMPfam:PF01554" /note="HMMPfam hit to PF01554, Multi antimicrobial extrusion protein MatE, score 1.2e-29" gene complement(3098781..3100613) /locus_tag="CMS_2937" /old_locus_tag="CMS2937" /db_xref="GeneID:6158446" CDS complement(3098781..3100613) /locus_tag="CMS_2937" /old_locus_tag="CMS2937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711567.1" /db_xref="GI:170783233" /db_xref="GeneID:6158446" /translation="MTDDTQDTGHRDGGASEPPLLSRRELRRRQQEMERTSAEPSGDA HRWVDPFPAVPRTSEGGLFGPDRVRLGAAPVEVEAPEDEAPEVDGPEDDAEATDPEHD EEVIVGTHAFDELFDDAEDDDVDPEDRVPAAGTPADDDADDERPAAEPTPFDAVVSPE AGSAWTVPAPHVVNAHPFRMPLRPSTEASGPEPADAEPASPARTEAPPAPVRADSAPV DDAPPARAAAAAAAAAAAAPAVEPQPTPVASLPAAPDDVEEPADAPRPGTDLTAFPDA DPQRYVMRTPRADAATSALTLFPEQTGQRPPRGPAVARTGFRGFMNAVTGGVFKIGPG AEEAAANAEVARREGDERVIRQATWPRAVSVLVANRKGGVGKTPTSLILGGVLGSVRG GSVAVVEVTDDPGALGYRAEGQPQRGLGELVRDRDEIHSAGQLAGYTAPQTSFASVVA SVGPRRELTGDDVIGVSRLIDEYYAMRVMDSGNQPSSSAFRGAIEVTDVLVVPVLNAG DAVLEAVALLDFLRELGGHAGVLADNAIIIRLHDGRPEDPAVVARIDRILDDARPAQI FTVPYDAHIAERGPISLASLDPEVSRAFTAATAGVVQRLAHAVR" gene 3100911..3101606 /locus_tag="CMS_2938" /old_locus_tag="CMS2938" /db_xref="GeneID:6158447" CDS 3100911..3101606 /locus_tag="CMS_2938" /old_locus_tag="CMS2938" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711568.1" /db_xref="GI:170783234" /db_xref="GeneID:6158447" /translation="MALHAERSRMTQRTKTMAFLSGGLVLGLGITATLAAWTDTEWVF GGNADGSGPGVGTGTFEVEQNVSVPFDPAAFGQFETNPGQDLAFAPGALTLSPGTSVY APVALRTIDGSVGAALTLQDAVPAEGAGLEAEDPDGLLLAALTLRVAVSATATTCDAA AFTTGTIIASGSLDAAQGTAAQALAADSGSTQYYCFEVTLPAAPVLPAGATVDVLQGR AVTPAWEFIGTSV" sig_peptide 3100911..3101018 /locus_tag="CMS_2938" /old_locus_tag="CMS2938" /note="Signal peptide predicted for CMS2938 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.715 between residues 36 and 37" misc_feature 3100956..3101024 /locus_tag="CMS_2938" /old_locus_tag="CMS2938" /note="1 probable transmembrane helix predicted for CMS2938 by TMHMM2.0 at aa 16-38" gene 3101626..3102312 /locus_tag="CMS_2939" /old_locus_tag="CMS2939" /db_xref="GeneID:6158448" CDS 3101626..3102312 /locus_tag="CMS_2939" /old_locus_tag="CMS2939" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711569.1" /db_xref="GI:170783235" /db_xref="GeneID:6158448" /translation="MTAQDTATRAEALAAARREAVDAARARARPRRPACVRVRDAVIT LAGLAGLAVIAWTVLSRVLGLSLVVLMTGSMAPTLPTGSVAITLDRVPAAELHVGDVV KVPRPGYELPVTHRIVEVGPVTGAVDALSPGVDPADPAARELVLQGDANASVDPSPYV VTEADRVLIGAPYLGYASRLLHMPLLVAGLGGAVLLLVGTSWPRAGGPRTTAPAGAPV RARRSAHRAR" misc_feature order(3101746..3101814,3102163..3102231) /locus_tag="CMS_2939" /old_locus_tag="CMS2939" /note="2 probable transmembrane helices predicted for CMS2939 by TMHMM2.0 at aa 41-63 and 180-202" gene 3102302..3103102 /locus_tag="CMS_2940" /old_locus_tag="CMS2940" /db_xref="GeneID:6158449" CDS 3102302..3103102 /locus_tag="CMS_2940" /old_locus_tag="CMS2940" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface-anchored protein" /protein_id="YP_001711570.1" /db_xref="GI:170783236" /db_xref="GeneID:6158449" /translation="MRADAGAATSARRPPLRVLLSAAAVVALVAGLLLIGGRAAVGLM RFHDTGLPGHLTLATDWRSDMLDVAPGEQGHWIIHATLRDEERGALDVRIRSVGDLSE IDPGVLLQLDRCDREWAVPPGAAPDAAPVCSVGSVPVLPPTPLSAFRDGPAAMPLPDI TAARGEHLLLTSTIDSSRSGDERLMGRTGTIAVGVTASGGDPEVGPVAGGVLPRTGGT ADIGALLLIGLGALGLGLMTRGAGTRRERAAAVVATATATATDPDARA" sig_peptide 3102302..3102418 /locus_tag="CMS_2940" /old_locus_tag="CMS2940" /note="Signal peptide predicted for CMS2940 by SignalP 2.0 HMM (Signal peptide probability 0.984) with cleavage site probability 0.482 between residues 39 and 40" misc_feature order(3102356..3102424,3102947..3103015) /locus_tag="CMS_2940" /old_locus_tag="CMS2940" /note="2 probable transmembrane helices predicted for CMS2940 by TMHMM2.0 at aa 19-41 and 216-238" misc_feature 3102935..3102952 /locus_tag="CMS_2940" /old_locus_tag="CMS2940" /note="PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide." gene 3103099..3104982 /locus_tag="CMS_2941" /old_locus_tag="CMS2941" /db_xref="GeneID:6158450" CDS 3103099..3104982 /locus_tag="CMS_2941" /old_locus_tag="CMS2941" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711571.1" /db_xref="GI:170783237" /db_xref="GeneID:6158450" /translation="MSARHGLGRHTGRRAEPAQPRRSRDPRLPRRAALVAAAVAVALV AGSVTPGLVPVAAAWTDREWTHERVATETVDCGVDTGYTTRASSRFLDGNLLTLDLDT VAGVQGLTAIDDQAAGAQVTPASARVLGPGVFANPLAVTAVAGAAALDLSGLSLGLPA GSAGALNQYARVSETGVATGASGLVSDSGGVGVTSGTPPASLPGRATISLGRVLPAVT DVTDASLAVGAVASRSTLDWCAARESDVWGDGSVSGVTRDYGIAGLDLRVASPAVSGL TSAVNTTTATALPAAATSLSGTTGLVGQLITARIGALVKTLGLGALTGTITVTGVDAA ATAVAPLLTHPLRSADGTVVVDLVTGTVRVDLAALLGSGPGGLNGLGPNSEIVVDAAL LNAVSARVGALVDARSAEIRAAMTTALQGVRIVIDVSTVISATVSVAGLGLTTAEILR LAVQFDGTLAQLAAGTVPIAVTPTVLPTSGLVGAAVNALLGTLLGVNSPLALGALLDG SLTTGLVAPIVSTVTNALTAPVTTLGATLAGLSARLVTAVAAVVNPLPSVVSLMVNVQ PDQPGAPPGATALPAVPPDTSAEYEVTALRIGLVDALAPASGFAVLELATSTAGRSTF RTP" sig_peptide 3103099..3103272 /locus_tag="CMS_2941" /old_locus_tag="CMS2941" /note="Signal peptide predicted for CMS2941 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.660 between residues 58 and 59" misc_feature 3103192..3103260 /locus_tag="CMS_2941" /old_locus_tag="CMS2941" /note="1 probable transmembrane helix predicted for CMS2941 by TMHMM2.0 at aa 32-54" gene 3105006..3105497 /locus_tag="CMS_2942" /old_locus_tag="CMS2942" /db_xref="GeneID:6158451" CDS 3105006..3105497 /locus_tag="CMS_2942" /old_locus_tag="CMS2942" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711572.1" /db_xref="GI:170783238" /db_xref="GeneID:6158451" /translation="MIHRPGAAPPAQGRPAAVSSVATELGALLMSIRSLRVEEAAVFD PDLQPGAFAVARWIRTDGPASAGAVAAGLLMDKSSVSRHLRVLREAGYVQDEPDPEDR RSTILTLTPLAEERLELVRKGTRERLQNRLHAWDTADVEQLAALLHRFNVSPRDRPAD ADA" misc_feature 3105144..3105455 /locus_tag="CMS_2942" /old_locus_tag="CMS2942" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 7.7e-16" gene complement(3105535..3106308) /locus_tag="CMS_2943" /old_locus_tag="CMS2943" /db_xref="GeneID:6158452" CDS complement(3105535..3106308) /locus_tag="CMS_2943" /old_locus_tag="CMS2943" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711573.1" /db_xref="GI:170783239" /db_xref="GeneID:6158452" /translation="MTDARRGSILGSMSPLLLAGLAGLLSGLSLVVGSLVAWFVKVPR EVVALVMAFGAGVLISALSFDLVDEAAESGGVIPTHGGFVAGAVVYVVLDQILEHGGF RRKHHGKSGGGGGTGVGIALGALLDGVPETAVQGLSLTGGGALSIGVLVAVVISNFPE GMSSTADLKQSGRSARYVFGLWTSIAVICALSSLGGYALLGGLLESGQSVVMAFAAGA ILAMICDTMIPEAFRKAQALTGLVTVLGFVASYAVHQAG" sig_peptide complement(3105535..3105636) /locus_tag="CMS_2943" /old_locus_tag="CMS2943" /note="Signal peptide predicted for CMS2943 by SignalP 2.0 HMM (Signal peptide probability 0.981) with cleavage site probability 0.314 between residues 34 and 35" misc_feature complement(order(3105547..3105600,3105613..3105681, 3105709..3105777,3105835..3105903,3105931..3105993, 3106030..3106089,3106117..3106173,3106198..3106266)) /locus_tag="CMS_2943" /old_locus_tag="CMS2943" /note="8 probable transmembrane helices predicted for CMS2943 by TMHMM2.0 at aa 15-37, 46-64, 74-93, 106-126,136-158, 178-200, 210-232 and 237-254" gene complement(3106328..3106933) /locus_tag="CMS_2944" /old_locus_tag="CMS2944" /db_xref="GeneID:6158453" CDS complement(3106328..3106933) /locus_tag="CMS_2944" /old_locus_tag="CMS2944" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711574.1" /db_xref="GI:170783240" /db_xref="GeneID:6158453" /translation="MQLFSALPLVRARQIAADTAALAGIVVSVLVGIAVAALIRPLGD LGRSMEESGTRLSGSMTDAADALGRLPLVGDAARGPFEDASGIGSGLVQAGRDQQSLV GTIALVLGLLVALVPIAFIVRHWLLRRISFVRRAAAARSLAATPGGTELLALRALSSR KPASLLKAHPDPVAAWRAGDPRVVRQLADLALRDAGVSAGR" sig_peptide complement(3106328..3106435) /locus_tag="CMS_2944" /old_locus_tag="CMS2944" /note="Signal peptide predicted for CMS2944 by SignalP 2.0 HMM (Signal peptide probability 0.681) with cleavage site probability 0.410 between residues 36 and 37" misc_feature complement(order(3106553..3106621,3106817..3106876)) /locus_tag="CMS_2944" /old_locus_tag="CMS2944" /note="2 probable transmembrane helices predicted for CMS2944 by TMHMM2.0 at aa 20-39 and 105-127" gene complement(3106972..3107325) /locus_tag="CMS_2945" /old_locus_tag="CMS2945" /db_xref="GeneID:6158454" CDS complement(3106972..3107325) /locus_tag="CMS_2945" /old_locus_tag="CMS2945" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711575.1" /db_xref="GI:170783241" /db_xref="GeneID:6158454" /translation="MTERPQDPDDTAAADAAIEAERWLVVDGRRWPRTDPSLPTELVD ALKSHLGRGRSGVRTAKRADDDAAVTAARERVSLAKHGLGERGPRWWDEPEDARLERA REALRALDALDAPSA" gene complement(3107487..3109601) /locus_tag="CMS_2946" /old_locus_tag="CMS2946" /db_xref="GeneID:6158455" CDS complement(3107487..3109601) /locus_tag="CMS_2946" /old_locus_tag="CMS2946" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711576.1" /db_xref="GI:170783242" /db_xref="GeneID:6158455" /translation="MPGGDARDRWRPHMTLTRETHHRLLPILSRDPHARGKRSTVTCH LKCDDACTKPVPNVTDNSYFRDIAGRALSRRTLLGGAGAGALAILVAQNAAAPGAEAA AAQAASKLPFTAITPVDAAVDQFTVPTGYRWAPIIRWGDPLFSYADDFDADNQTAKLA SRQFGYNNDYLDIIPINSRNKEALLVANHEYTNENIMFPPAADDAELAEQRRIGKASH GMSVVALRRKTVGQPWTYTIGHQKNRRITADTPFTVTGPAAGSASLRTKDDPKGTRIL GTLGNCAGGTTPWGTVLSGEENFNGYFRTPGTSVADKRYGLADKATTRGWEEIDPRFD ARNAGYENEPNRFGWIVEVDPFEPGEAPVKHTALGRFKHEGANVILGKSGHVAAYMGD DERFDYLYKFVSHDTMVVGTSRQDRRTNKQLLTRGALYVARFTGDSPVAEITGTGQLP SDGQFDGIGQWIPLVVDGVCQVPGFTTEQALVNTRLVADAAGATKMDRCEDVQPSPVT GKIYVACTNNTDRGKAGKEGATEMNPRTTNRDGHIVEITEDGGDARSTTFSWNLLLVA GDPAKNESTYFAGFPKDKVSPISCPDNVAFDSEGNLWISTDGAPSTIGLNDGLFKVPV EGAERGHVQQFLSVPTEAETCGPVVHDTEGMVFVAVQHPGEDGSFAEQHSFFPDYVPA GVTPPKGAWRGPRPSVIQVWRG" misc_feature complement(3107610..3109394) /locus_tag="CMS_2946" /old_locus_tag="CMS2946" /inference="protein motif:HMMPfam:PF05787" /note="HMMPfam hit to PF05787, Bacterial protein of unknown function DUF839, score 9.8e-221" misc_feature complement(3108453..3108476) /locus_tag="CMS_2946" /old_locus_tag="CMS2946" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 3109755..3110507 /locus_tag="CMS_2947" /old_locus_tag="CMS2947" /db_xref="GeneID:6158456" CDS 3109755..3110507 /locus_tag="CMS_2947" /old_locus_tag="CMS2947" /codon_start=1 /transl_table=11 /product="putative cyclohexanol dehydrogenase" /protein_id="YP_001711577.1" /db_xref="GI:170783243" /db_xref="GeneID:6158456" /translation="MARFDTKTALVTGGGSGIGAAISRALAAEGASVVVTDIQLEAAE RVVAEIEAAGGTATAFRQDTSKAEDSEAAVAHAVTTYGALHLAVNNAGISAPAADIGD YDIAAWDRTRAVDLDGVFYGLRYQLPAMVAAGGGAVVNMSSVLGSVGFAQSAAYVASK HALVGLTKVAALEYTARGVRTNAVGPGFIDTPLVRSSLSADALAYLESQHATGRLGTD TEVAALVLFLLSHDASFISGSYHLVDGGYSAR" sig_peptide 3109755..3109835 /locus_tag="CMS_2947" /old_locus_tag="CMS2947" /note="Signal peptide predicted for CMS2947 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.905 between residues 27 and 28" misc_feature 3109779..3110495 /locus_tag="CMS_2947" /old_locus_tag="CMS2947" /inference="protein motif:HMMPfam:PF00106" /note="HMMPfam hit to PF00106, Short-chain dehydrogenase/reductase SDR, score 3e-68" misc_feature 3110181..3110267 /locus_tag="CMS_2947" /old_locus_tag="CMS2947" /note="PS00061 Short-chain dehydrogenases/reductases family signature." gene complement(3110632..3110925) /locus_tag="CMS_2948" /old_locus_tag="CMS2948" /db_xref="GeneID:6158457" CDS complement(3110632..3110925) /locus_tag="CMS_2948" /old_locus_tag="CMS2948" /codon_start=1 /transl_table=11 /product="putative secondary metabolism monooxygenase" /protein_id="YP_001711578.1" /db_xref="GI:170783244" /db_xref="GeneID:6158457" /translation="MTATVLYAEFTALPGHEEQVARMIADLAELVRAEPGNVVFEPYR RVEDPARFVVHEVYRDEAAFQAHIGASYGADFNAALGPLIVEDGSQLTFLAPV" misc_feature complement(3110701..3110892) /locus_tag="CMS_2948" /old_locus_tag="CMS2948" /inference="protein motif:HMMPfam:PF03992" /note="HMMPfam hit to PF03992, Antibiotic biosynthesis monooxygenase, score 1.2e-14" gene complement(3110922..3111740) /locus_tag="CMS_2949" /old_locus_tag="CMS2949" /db_xref="GeneID:6158458" CDS complement(3110922..3111740) /locus_tag="CMS_2949" /old_locus_tag="CMS2949" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_001711579.1" /db_xref="GI:170783245" /db_xref="GeneID:6158458" /translation="MDPKGAQVTLTDPAGSTPAATRTPVLEAKRLVKTFGRVVGLDGV SLELFPGEVLAIIGDNGAGKSTLIKCLTGAETPDEGELFLDGEPVSFKRPQDARAAGI ETVYQNLAVSPALDVASNLYLGREKRKKGILGSVFRMLDTAGMRRDAKAELTELGIST LQDVTVPVENLSGGQRQAVAVARAAAFGSKVVVLDEPTAALGVRESNQVLELVRNLRD RGIPVILISHNMPQVFEVADRIHIQRLGKKAATITPQSHSMTDAVAIMTGAATA" misc_feature complement(3111003..3111590) /locus_tag="CMS_2949" /old_locus_tag="CMS2949" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 1.9e-47" misc_feature complement(3111186..3111230) /locus_tag="CMS_2949" /old_locus_tag="CMS2949" /note="PS00211 ABC transporters family signature." misc_feature complement(3111546..3111569) /locus_tag="CMS_2949" /old_locus_tag="CMS2949" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(3111716..3112780) /locus_tag="CMS_2950" /old_locus_tag="CMS2950" /db_xref="GeneID:6158459" CDS complement(3111716..3112780) /locus_tag="CMS_2950" /old_locus_tag="CMS2950" /codon_start=1 /transl_table=11 /product="putative sugar transport integral membrane protein" /protein_id="YP_001711580.1" /db_xref="GI:170783246" /db_xref="GeneID:6158459" /translation="MLGRVTVSRTTAHTNPPTSALDLANEFLDRRTPLDRIRGVLHRY PAVSPAVVLVLAIIVFGLLNDRFLDPANLSLVTQQVAVVGTLAVAQTLIILTAGIDLS VGAVMVLTSMVIAQTASQNGLPAPAALVAGLVVGLAAGAFNGLLVTRLRLPPFIVTLG TLNIFVALTLLYSNGATVRGVDMPAALSWTGRTFDLAGVKISFGVVLMLVLYVLVAFI LGKTAWGRHVYAVGDDKEAARLAGISVNRVLMSVYLAAGAILAVGAWIAIGRSNAASP NAGADLNLDSITAVVIGGTSLFGGRGTVWGTLLGALIVGVFRNGLSLAGLDVLYQTLA VGVLIIVAVSVDQWIRKVRK" misc_feature complement(order(3111746..3111814,3111842..3111910, 3111971..3112039,3112124..3112192,3112253..3112321, 3112349..3112417,3112436..3112504,3112595..3112663)) /locus_tag="CMS_2950" /old_locus_tag="CMS2950" /note="8 probable transmembrane helices predicted for CMS2950 by TMHMM2.0 at aa 40-62, 93-115, 122-144, 154-176,197-219, 248-270, 291-313 and 323-345" misc_feature complement(3111752..3112567) /locus_tag="CMS_2950" /old_locus_tag="CMS2950" /inference="protein motif:HMMPfam:PF02653" /note="HMMPfam hit to PF02653, Bacterial inner-membrane translocator, score 3.9e-58" gene complement(3112765..3113865) /locus_tag="CMS_2951" /old_locus_tag="CMS2951" /db_xref="GeneID:6158460" CDS complement(3112765..3113865) /locus_tag="CMS_2951" /old_locus_tag="CMS2951" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport lipoprotein" /protein_id="YP_001711581.1" /db_xref="GI:170783247" /db_xref="GeneID:6158460" /translation="MTNRSPRFVRTIALGSAALIAAAGLTGCSSSSGGSGSGGSGGSG DIGVSLIVKTTTNPFFVAMQDGAKDAAAKDGIDLTLAAGKEDGDEDTQIQAIENAISK GDKGILITPNGPSVVDAIQKARDAGLFVIALDTAPDPADSVDITFATDNFAAGESIGK FAAAQLDGKKATIALLDLYDDKAVSVDYNRDQGFLTGMGIDVADKTKNGDEAKTGDYS GGDYEIVGNEATQGAEDGGRTAMETLLSKDPDINVVYTINEPAAFGAYQALQAAGKEK DVVLVSVDGGCAGVKNVKEGVIGATAQQYPVKMAQLGVEAIAQLAKDGTKPATSAGLD FFDTGSALVTDTPVDGLESITADDAATKCWGE" sig_peptide complement(3112789..3112866) /locus_tag="CMS_2951" /old_locus_tag="CMS2951" /note="Signal peptide predicted for CMS2951 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.202 between residues 26 and 27" misc_feature complement(3112831..3113733) /locus_tag="CMS_2951" /old_locus_tag="CMS2951" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 1.3e-05" misc_feature complement(3113782..3113814) /locus_tag="CMS_2951" /old_locus_tag="CMS2951" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 3113979..3115031 /locus_tag="CMS_2952" /old_locus_tag="CMS2952" /db_xref="GeneID:6158461" CDS 3113979..3115031 /locus_tag="CMS_2952" /old_locus_tag="CMS2952" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001711582.1" /db_xref="GI:170783248" /db_xref="GeneID:6158461" /translation="MTPLSSPPGSSSDARRPTMKHVARLAGVGLKTVSRVVNGEANVS AEMTARVQAAVEQLQYQPDLHAGNLRRADRRTNTLGLLVGSVANPFSGAVHRAVEEVA KERRVAVFASSLDDDPERERSSVDAFLARRVDGLILTTIAPSQAYLGVAASRGTPLVF VDRVPAGLEADAVIVDNAAGISRAVAHLADQGHRRIAFLGDRPEIFTARERERGFVQE MQRRGLPVLPELVLDGAWDERVAEALAERLLALPEPPTAIVSGQNLITIGVITALRRH GAHRRIALVGFDDLPMAALLDPAVTVIAQDPSGIGHAAAERVFARLDGDEGPAQTVVV PTTLIVRGSGEVPRNA" misc_feature 3114027..3114104 /locus_tag="CMS_2952" /old_locus_tag="CMS2952" /inference="protein motif:HMMPfam:PF00356" /note="HMMPfam hit to PF00356, Bacterial regulatory protein, LacI, score 1.5e-08" misc_feature 3114204..3115004 /locus_tag="CMS_2952" /old_locus_tag="CMS2952" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 6.2e-19" gene 3115024..3115914 /locus_tag="CMS_2953" /old_locus_tag="CMS2953" /db_xref="GeneID:6158462" CDS 3115024..3115914 /locus_tag="CMS_2953" /old_locus_tag="CMS2953" /codon_start=1 /transl_table=11 /product="putative carbohydrate kinase" /protein_id="YP_001711583.1" /db_xref="GI:170783249" /db_xref="GeneID:6158462" /translation="MHDQPIVVVGDALIDLLREDGEETAFVGGAALNVAVGLAILGHR VQLIAMVGGDAHGDRIRAELDAHGVELIATVGLSGTSVAVSEREDGEPRYSFNEAAWN RRVRIGEAERAALDAASLVVVSCFPYDDHEQADELLAAVRDPRERLLVDPNPRAGMLH DAARFRDGFARAAAESLLVKIGDDDTALLGLGALADARAALHDAGSRLVLATEGARGA SVQLEGGEVVAAGIAPDPRPIVDTMGAGDACLAAAADAIARRGAPLTPADGEAMLRTC MAIAAATCREQGALLRMPTA" misc_feature 3115036..3115911 /locus_tag="CMS_2953" /old_locus_tag="CMS2953" /inference="protein motif:HMMPfam:PF00294" /note="HMMPfam hit to PF00294, Carbohydrate kinase, PfkB,score 1.9e-27" misc_feature 3115105..3115179 /locus_tag="CMS_2953" /old_locus_tag="CMS2953" /note="PS00583 pfkB family of carbohydrate kinases signature 1." misc_feature 3115744..3115785 /locus_tag="CMS_2953" /old_locus_tag="CMS2953" /note="PS00584 pfkB family of carbohydrate kinases signature 2." misc_feature 3115963..3117744 /note="submitted with no further information" gene 3116322..3116735 /locus_tag="CMS_2954" /old_locus_tag="CMS2954" /db_xref="GeneID:6158463" CDS 3116322..3116735 /locus_tag="CMS_2954" /old_locus_tag="CMS2954" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711584.1" /db_xref="GI:170783250" /db_xref="GeneID:6158463" /translation="MTEIRELAAAEGLPSGDIDRLVGEFRARGRALVQGRLVPVRHVK GPMQSVTDLDVFELRAMVEYGESLEAHVRVYHVEPVRLRQPGGTTIVGLHVHLKNLSD PATVRAHQDSELQIARSRYHSGRTSSWGGASLVNR" gene 3116751..3117209 /locus_tag="CMS_2955" /old_locus_tag="CMS2955" /db_xref="GeneID:6158464" CDS 3116751..3117209 /locus_tag="CMS_2955" /old_locus_tag="CMS2955" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="YP_001711585.1" /db_xref="GI:170783251" /db_xref="GeneID:6158464" /translation="MQSMSPAYHDFEPESTRDSPTDEFDTGTETDSERLARLLAEADV DLIDTLRRVREHRSLSQEQLGALMGVSQATVSSFESGASEPKLATIRRYAHALNVVVE HSVRPIDASLSSLFTWTTVSGFITNPRSTSTRAGTYSAANSKKSDFALAG" misc_feature 3116898..3117062 /locus_tag="CMS_2955" /old_locus_tag="CMS2955" /inference="protein motif:HMMPfam:PF01381" /note="HMMPfam hit to PF01381, Helix-turn-helix motif,score 3.2e-13" gene 3117229..3117735 /locus_tag="CMS_2956" /old_locus_tag="CMS2956" /db_xref="GeneID:6158465" CDS 3117229..3117735 /locus_tag="CMS_2956" /old_locus_tag="CMS2956" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711586.1" /db_xref="GI:170783252" /db_xref="GeneID:6158465" /translation="MSDVVELVNLVELDDMYVYEERGRRIARDSNEFDNTDNEAAQSD ELKPKIRNLMGVTELSGSDHYGIAFRFRIVFDDRAGNEFIADMQARYGLPHKCQISDD IKSEFAQEVAFYAVYPYLRASLQTTASRMGVPAPVLAIVRRGEFELGEQMSDDQTRVE FHDNAPDV" gene 3117848..3118879 /locus_tag="CMS_2957" /old_locus_tag="CMS2957" /db_xref="GeneID:6158466" CDS 3117848..3118879 /locus_tag="CMS_2957" /old_locus_tag="CMS2957" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711587.1" /db_xref="GI:170783253" /db_xref="GeneID:6158466" /translation="MASESIEPPSGTPSAAVLEQVIAVVRDASADDTLPRPTAAGLRL APMEQTRRITMDDARTLIIGGTGTVGSAVIAEALRRGMTGLRVMSRDARRLAGLPDGV EGVVGDLGDPYDAMPAFDGVEQVFLALTGTPTELYETTVAVDQAVAAGVRRIVYLSVQ DLDRAPQVPHNSAKLAVESLLEHSGVEACFLRVNNFFQNDLWYLDAIRDGVYPQPLGA TGVSRVDVRDIAEVAVSALTPGSELAGPIDVAGPTAWTGEATAAALSEALGRAVTYGG DDLAAWREASLASMPSWLVYDYERMYSGFQRDGLIGSPEAIARLTAILGHAPRSYEDY VRELLAPAA" gene complement(3118909..3119631) /locus_tag="CMS_2958" /old_locus_tag="CMS2958" /db_xref="GeneID:6158467" CDS complement(3118909..3119631) /locus_tag="CMS_2958" /old_locus_tag="CMS2958" /note="Appears to be a fusion relative to S. coelicolor and others." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711588.1" /db_xref="GI:170783254" /db_xref="GeneID:6158467" /translation="MTAPDRRFPRSVYREGAEPDVRFSLANERTFLAWIRTSLALIAG GVALEALGLGLQPGFRLAASIVLIVTGIAAPAQAWIGWMRTERALRRDHPLPSAALSL PLGIAVVAAGDARAAGRADGVSAPDPAARPFDPGLQPERTALAWRRTALALVVGSLLG LRVLPTLLGAAGLVVAAVGVIAALTVLATAHRRYRRVHRILTSGSAEPGTTRLPGGAL PALVAALTACAGLAALALALTR" misc_feature complement(order(3118918..3118986,3119065..3119133, 3119383..3119451,3119479..3119538)) /locus_tag="CMS_2958" /old_locus_tag="CMS2958" /note="4 probable transmembrane helices predicted for CMS2958 by TMHMM2.0 at aa 32-51, 61-83, 167-189 and 216-238" misc_feature complement(3119278..3119604) /locus_tag="CMS_2958" /old_locus_tag="CMS2958" /inference="protein motif:HMMPfam:PF02656" /note="HMMPfam hit to PF02656, Protein of unknown function DUF202, score 8.6e-14" gene complement(3119628..3120671) /locus_tag="CMS_2959" /old_locus_tag="CMS2959" /db_xref="GeneID:6158468" CDS complement(3119628..3120671) /locus_tag="CMS_2959" /old_locus_tag="CMS2959" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711589.1" /db_xref="GI:170783255" /db_xref="GeneID:6158468" /translation="MSNASMKTVPVDLPGRLPDSGGMASRTRTEPVVDLLLLAVAAVW GASFLAAKDLAAETGVPVAVALRFLVAAVATGVVCLARRERLPRGRGLLIAALLGCSQ AAVIGLETWGVHLTSATNAGLLISLALVMTPVLEGAASRSWLPRSYFVAAVAAVVGVA LLVSEGGLRAPTPGDGLVIAAAVVRAVHVTASGHLTRGRSEGSLGVVLVQMLVCAALF SAMSGPDLPAAAASLDARGWAGLLFLGVLCSLFAFAVQLWAVRRTSASRASILMGTEP VWALLVGVVLAGEAIGPIGAAGAALIVAASYAGQAIERRHRARIGAAIGQAGENGGMP SRAPAVPSPHPAA" misc_feature complement(3119739..3120125) /locus_tag="CMS_2959" /old_locus_tag="CMS2959" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 3.1e-14" misc_feature complement(order(3119766..3119834,3119895..3119963, 3120006..3120065,3120084..3120152,3120180..3120233, 3120252..3120320,3120333..3120401,3120438..3120506, 3120519..3120578)) /locus_tag="CMS_2959" /old_locus_tag="CMS2959" /note="9 probable transmembrane helices predicted for CMS2959 by TMHMM2.0 at aa 32-51, 56-78, 91-113, 118-140,147-164, 174-196, 203-222, 237-259 and 280-302" misc_feature complement(3120180..3120548) /locus_tag="CMS_2959" /old_locus_tag="CMS2959" /inference="protein motif:HMMPfam:PF00892" /note="HMMPfam hit to PF00892, Protein of unknown function DUF6, score 2.3e-08" gene 3120737..3121633 /locus_tag="CMS_2960" /old_locus_tag="CMS2960" /db_xref="GeneID:6158469" CDS 3120737..3121633 /locus_tag="CMS_2960" /old_locus_tag="CMS2960" /codon_start=1 /transl_table=11 /product="LysR family transcriptional regulator" /protein_id="YP_001711590.1" /db_xref="GI:170783256" /db_xref="GeneID:6158469" /translation="MAAAMHVSASAVSQQLAALQAGVAVPLTVRRGRRLALTEAGEAL AAASVRVDEALAAARDAVGSFLEHDARAVRVSAFHSAGLALFGPLLAELAGAGGSDAG GSAAGVRVALADADVAQGDFAGLTADHDLVVAHRLPHDPPWPTARLVVVPLLVEPLDI ALHAGHPLASSAGITPDRLRDERWISTHAGFPLAGVLDHLGALIGQAPRVVHRVNEFS VAAQIVRTGDAIAVMPRTTGAPLAVDGMVLRPVLGARLVRHVDVLARPDALAQTPVRA VLAALRRVADAAAAAAERGGGA" misc_feature 3120737..3120862 /locus_tag="CMS_2960" /old_locus_tag="CMS2960" /inference="protein motif:HMMPfam:PF00126" /note="HMMPfam hit to PF00126, Bacterial regulatory protein, LysR, score 1.1e-08" misc_feature 3120932..3121594 /locus_tag="CMS_2960" /old_locus_tag="CMS2960" /inference="protein motif:HMMPfam:PF03466" /note="HMMPfam hit to PF03466, LysR, substrate-binding,score 4.3e-20" gene 3121767..3122417 /locus_tag="CMS_2961" /old_locus_tag="CMS2961" /db_xref="GeneID:6158470" CDS 3121767..3122417 /locus_tag="CMS_2961" /old_locus_tag="CMS2961" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711591.1" /db_xref="GI:170783257" /db_xref="GeneID:6158470" /translation="MRTAEGSRRITGFVLLGITSVMMVPLVYGFARDASWFLGEEIGL ARAESVSLVAWVAAAGVALAYVVGTSVAVPGVRPESFRWSGLKAIAVVSAVVSGIVEE LVFRGLLMDALDAAGSSAALQVVVSALAFGVAHAVWGAFAGDLRLVLPTVVATTLLGG ALAVVYLLADRTLLPVAIAHVAINLVIEPGLMLSVVSASRAGRPRRAGGGASPDRA" sig_peptide 3121767..3121859 /locus_tag="CMS_2961" /old_locus_tag="CMS2961" /note="Signal peptide predicted for CMS2961 by SignalP 2.0 HMM (Signal peptide probability 0.988) with cleavage site probability 0.892 between residues 31 and 32" misc_feature order(3121800..3121859,3121926..3121994,3122013..3122081, 3122124..3122192,3122205..3122273,3122286..3122354) /locus_tag="CMS_2961" /old_locus_tag="CMS2961" /note="6 probable transmembrane helices predicted for CMS2961 by TMHMM2.0 at aa 12-31, 54-76, 83-105, 120-142,147-169 and 174-196" misc_feature 3122028..3122339 /locus_tag="CMS_2961" /old_locus_tag="CMS2961" /inference="protein motif:HMMPfam:PF02517" /note="HMMPfam hit to PF02517, Abortive infection protein,score 1.8e-13" gene complement(3122433..3123287) /locus_tag="CMS_2962" /old_locus_tag="CMS2962" /db_xref="GeneID:6158471" CDS complement(3122433..3123287) /locus_tag="CMS_2962" /old_locus_tag="CMS2962" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711592.1" /db_xref="GI:170783258" /db_xref="GeneID:6158471" /translation="MVTGGGRANARARAQRWFTDPELTPVSSAFDARESAASRDLSIG ALVARHRAVHGRPPSTLLDVSCGAGELLATAAELLPGCRLLGIDISESAVARARERVP GADIRVGAAEEAAAYDAWPPLDAVMVHLSLGLWRDPSAGLARIVERLAADATLATVDI GRGGGSEPDDPLSAAYLRDQREASFTVGELRGLLRDAAPGARITVGTTGLAGLDATAP EIPAMLGDPAFLTMIRSAGARAASRGPSPEVLHGWVDVHGAPDGRRPATTLRPLPPAG GIDLGRLA" gene complement(3123281..3124030) /locus_tag="CMS_2963" /old_locus_tag="CMS2963" /db_xref="GeneID:6158472" CDS complement(3123281..3124030) /locus_tag="CMS_2963" /old_locus_tag="CMS2963" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711593.1" /db_xref="GI:170783259" /db_xref="GeneID:6158472" /translation="MSGRRGHAVRMILHLALPFALRATAERGWPRGRSAALAAYDVAT VLIASPRAARRLPTTPSPRRPKRIGVARVVCGGIAGGAMPSVVRAAVRTSPGATGSSK RIDGLERRGGATARWTSRAAPSGVVPAMRTALVAAAEEAIWRAPIRSGDHVRLGTLAA AGASVAGFALLHLPVGGPRALPYTALFGAVASAFALSWGTPSAVAFHVAHNLVLRRGA PGGSARSARSTRATAEAERAPVAEIPSEATW" misc_feature complement(3123377..3123652) /locus_tag="CMS_2963" /old_locus_tag="CMS2963" /inference="protein motif:HMMPfam:PF02517" /note="HMMPfam hit to PF02517, Abortive infection protein,score 0.031" misc_feature complement(order(3123410..3123478,3123506..3123574)) /locus_tag="CMS_2963" /old_locus_tag="CMS2963" /note="2 probable transmembrane helices predicted for CMS2963 by TMHMM2.0 at aa 153-175 and 185-207" gene complement(3124027..3124848) /locus_tag="CMS_2964" /old_locus_tag="CMS2964" /db_xref="GeneID:6158473" CDS complement(3124027..3124848) /locus_tag="CMS_2964" /old_locus_tag="CMS2964" /codon_start=1 /transl_table=11 /product="putative antibiotic processing protein" /protein_id="YP_001711594.1" /db_xref="GI:170783260" /db_xref="GeneID:6158473" /translation="MTNFELHATNLVDVVYGNERLRYDDPSENWFEASKIYRPSMAWD APGVAPLLRSRVLQRIATRAGKRYTHLPFVALPEPRATSVMLEDAIERRFSADEYDPG AVPLDVVASLLLKSYGAVRRANGWRRPVPSGGALYPLDVYLIARNVEGIEPGVHHFDA FEKGLVRLGDVDYGAFMAALLREDELSGTAFSIVLSCSFWRSRFKYGPRAYRFALIEA GHVMQNMVLLATAHGLTSRPYGGFVDDELTEVMIDQNGVDEAPIYVLTAGSALPG" gene complement(3124859..3125908) /locus_tag="CMS_2965" /old_locus_tag="CMS2965" /db_xref="GeneID:6158474" CDS complement(3124859..3125908) /locus_tag="CMS_2965" /old_locus_tag="CMS2965" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711595.1" /db_xref="GI:170783261" /db_xref="GeneID:6158474" /translation="MRRGTTDEMRETGDLILGPDAWEFFSDEQLADPAMPHARWTDDA PLWWREGVDASTGRRAWAPAQLVHLAGPWPGDASIAYATSNGLACGITETEARISGLL EAVERDAFMLTWYNRLSLPHVDVSTPRLRRFISTYIRPTGLQLHLIDMSVFSGIPTVL AVVRNPHTGLAPVAIGAASAATIERAGEKAATEGMYTRTWMKTEQREGNALHSTDWAG DVSSFEDHIRLFAGTDLVPELDFLTADTGTTGPGRSRNFDDSDPDALWSALVGHLADG GTPVVAFDLTSPDVVEAGARVSKVVLPGYRQLDATYAGRMLGGSRLREESHRLGLAPG PFTHADLNHVPHPFP" gene complement(3125949..3127182) /locus_tag="CMS_2966" /old_locus_tag="CMS2966" /pseudo /db_xref="GeneID:6158475" gene complement(3127179..3127907) /locus_tag="CMS_2967" /old_locus_tag="CMS2967" /db_xref="GeneID:6158476" CDS complement(3127179..3127907) /locus_tag="CMS_2967" /old_locus_tag="CMS2967" /codon_start=1 /transl_table=11 /product="putative hydroxylase" /protein_id="YP_001711596.1" /db_xref="GI:170783262" /db_xref="GeneID:6158476" /translation="MRYVGNRDGFRDALAALAVTAPAVCDPATRVIDLVAMDPGDRRI RSRALEAGRLTVVVSSRRVDVGDARGEAEARLLADLDHAVLLRCAPLEESLDSYRYWA ELGGVLLSSIHDAGVAWIALPDLAEAACAAGREAVARAGRAFDVTGPVQVPMADVAAA LSADIGREIRHERLDPGAFEQVLLRNGVPPSFASWLPAHQEETSDPALPGTTPVLPAL LGRPPALPVTSRPETAHIREESRR" gene complement(3127904..3128671) /locus_tag="CMS_2968" /old_locus_tag="CMS2968" /db_xref="GeneID:6158477" CDS complement(3127904..3128671) /locus_tag="CMS_2968" /old_locus_tag="CMS2968" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711597.1" /db_xref="GI:170783263" /db_xref="GeneID:6158477" /translation="MSLVSPVALAGTYARAQLLEAVRTPISIIMGIGTPTVAFLFFVL PQRRIAEDPDAAAAAVAALCVFGVMLNCLFEFSVEISQMRDRPWGKYLRTLPSPAVAR VLGYLGSTGVLAILSVIPLLVIAWVTTDAQVTLGGLLLGFAALAVTAVPSMLLGVCVG YLTRPKAAVAVAQVLMLLLAFGGGLFLPPQLFPDALDAFSMALPTRAALEITSWAALG GDAVPWIPLAVLLAWVAALASLALVLIRRDASAVIRS" misc_feature complement(order(3127940..3128008,3128099..3128167, 3128186..3128254,3128297..3128365,3128438..3128506, 3128543..3128611)) /locus_tag="CMS_2968" /old_locus_tag="CMS2968" /note="6 probable transmembrane helices predicted for CMS2968 by TMHMM2.0 at aa 21-43, 56-78, 103-125, 140-162,169-191 and 222-244" gene complement(3128668..3129540) /locus_tag="CMS_2969" /old_locus_tag="CMS2969" /db_xref="GeneID:6158478" CDS complement(3128668..3129540) /locus_tag="CMS_2969" /old_locus_tag="CMS2969" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711598.1" /db_xref="GI:170783264" /db_xref="GeneID:6158478" /translation="MGVDFGSTTALSDVDLDIHEGEVVGLIGANGAGKSTVIGLLHGA VLPTRGRVHLFGSDPRDPRSRMRLGTTPQSVALPETLRVDELIRLVGAHFRDQAPRDE IVRDFGIEPFLRTRAGALSGGQQRAVAVALAFLGSPRLVLLDEPTAGLDLVVRRRLRE AIARRAAGGCTVLLTSHYFEDIEDLATRIVVLAAGRVTADGSLAEMRRGGREVEISFA TDDPSAFVGVTPADASRIIGRRLHLTTDDPDELLRSVYAVGSRVDDLEVRRVSLEDAL LSLPRHADPEGSGR" misc_feature complement(3128956..3129471) /locus_tag="CMS_2969" /old_locus_tag="CMS2969" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 2.2e-39" misc_feature complement(3129139..3129183) /locus_tag="CMS_2969" /old_locus_tag="CMS2969" /note="PS00211 ABC transporters family signature." misc_feature complement(3129436..3129459) /locus_tag="CMS_2969" /old_locus_tag="CMS2969" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature 3129563..3130265 /note="submitted with no further information" gene complement(3130332..3131198) /locus_tag="CMS_2970" /old_locus_tag="CMS2970" /db_xref="GeneID:6158479" CDS complement(3130332..3131198) /locus_tag="CMS_2970" /old_locus_tag="CMS2970" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711599.1" /db_xref="GI:170783265" /db_xref="GeneID:6158479" /translation="MSTDLPGGLFPLADDLTVTRFGYGAMQLAGPRVFGPPKDPDAAR AVLREAVALGITHIDTADFYGPGHTNAIIEEALFPYPDRLHIVTKVGSLRDEKGRWPQ ALSAAELRQAVYDNLTHLTLDVLDVVNLRVGAFDSPTDGSIEEPFTALAELQREGLIR HLGVSNVTHAQVAEARQIAPIVTVQNHYNLARRDDDALIDELAADGIAYVPYFPLGGF SPLQSEVLARVAASLGSAPLPVALAWLLQRSPNVLVIAGTSSVEHLRENVAGARIRLP EDALAELEGIGG" misc_feature complement(3130335..3131144) /locus_tag="CMS_2970" /old_locus_tag="CMS2970" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 3.6e-35" gene complement(3131319..3132590) /locus_tag="CMS_2971" /old_locus_tag="CMS2971" /db_xref="GeneID:6158480" CDS complement(3131319..3132590) /locus_tag="CMS_2971" /old_locus_tag="CMS2971" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711600.1" /db_xref="GI:170783266" /db_xref="GeneID:6158480" /translation="MPSPSAPTLSRTPAPTRDVRRARVAVGILFFTNGAIVANLLPRY PSIKAELGLANVEFGAAVAASPLGALIAGLAAGVLIRRYRSARVAVVATVVASVGILL AGLAPGWLVLAGALFLAGAMDSITDVAQNSHALRVQRLYGRSIINSFHAVWSIGAVAG GIMGAAAAQIRLPLVVHLSISAVLFSALAVLSLLWLLKGPEPEPGEGGAAHAHAPDPE GDVARAASPRALGLVAKYGVLLALVIIASGGAIVEDAGSSWSAIYLSGDLGASAFVAG LGFISLQGMQFVGRMLGDRMVDRFGQRAIARLGGVLVLVGMGAALAFPSIIGTIVGFG VAGFGVATLIPAAMQSADELPGFKPGTGLTIVGWLLRLGFLISPPVVGAIADASSLRF GLIFIPAAGLLVLVFSRVLATRRAHPAAQGL" misc_feature complement(order(3131352..3131420,3131439..3131507, 3131550..3131618,3131622..3131681,3131748..3131816, 3131835..3131903,3132000..3132068,3132087..3132146, 3132258..3132326,3132351..3132419,3132462..3132530)) /locus_tag="CMS_2971" /old_locus_tag="CMS2971" /note="11 probable transmembrane helices predicted for CMS2971 by TMHMM2.0 at aa 21-43, 58-80, 89-111, 149-168,175-197, 230-252, 259-281, 304-323, 325-347, 362-384 and 391-413" misc_feature complement(3131433..3132515) /locus_tag="CMS_2971" /old_locus_tag="CMS2971" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(3132683..3133159) /locus_tag="CMS_2972" /old_locus_tag="CMS2972" /db_xref="GeneID:6158481" CDS complement(3132683..3133159) /locus_tag="CMS_2972" /old_locus_tag="CMS2972" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711601.1" /db_xref="GI:170783267" /db_xref="GeneID:6158481" /translation="MGCGAAGDNCPAAEYLPTGRYPLSGKLVIMTQMSFRVTRDRPGV TEGRYPANCPSRTLLDHITSKWGVLVLLALGERSRRWGELRREVEGISEKMLASTLRT LADDGLVLREAQPTIPPRVDYRLTETGHEVSARLVPLMDLVMDVTEDTSPLASRRP" misc_feature complement(3132707..3132979) /locus_tag="CMS_2972" /old_locus_tag="CMS2972" /inference="protein motif:HMMPfam:PF01638" /note="HMMPfam hit to PF01638, Protein of unknown function DUF24, score 6.8e-27" gene 3133178..3134041 /locus_tag="CMS_2973" /old_locus_tag="CMS2973" /db_xref="GeneID:6158482" CDS 3133178..3134041 /locus_tag="CMS_2973" /old_locus_tag="CMS2973" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711602.1" /db_xref="GI:170783268" /db_xref="GeneID:6158482" /translation="MTIVVTAATGRLGSRIVASLLARGYAASDVLATARRPEALADLA AQGVRTARLEYTDAESVKAAIQPGDTLVLVSGSEVGQRVPQHTTVIEAAKEAGVGRIL YTSVLRASTTELFIAGEHKATEEVLAASGVPVTLLRNGWYTENYAGTVDSVKQSGALL TSAGDGRVASATIADFAEATAVAALDDSLAGQTLELAGDERWTQDDLAEAISGILGQP VPVSQVSAEEHARILGGAGLDEGTVGFVVGLDAATRAGQLDDETGDLARLLGRPTTSL ADGLRQAVAGA" gene complement(3134105..3135010) /gene="mmuM" /locus_tag="CMS_2974" /old_locus_tag="CMS2974" /db_xref="GeneID:6158483" CDS complement(3134105..3135010) /gene="mmuM" /locus_tag="CMS_2974" /old_locus_tag="CMS2974" /EC_number="2.1.1.10" /note="converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines" /codon_start=1 /transl_table=11 /product="homocysteine methyltransferase" /protein_id="YP_001711603.1" /db_xref="GI:170783269" /db_xref="GeneID:6158483" /translation="MTRPRPLPNRPLVLDGGLGTLLEARGHDLSDPLWSARVLADEPD AVRAAHAEYFRAGADVAITASYQVGFEAFAARGLSAAETEELLRASVRLAAEARDEVA QDDAPGAGRDRWIAASVGPYGATLGDGSEYAASSGLTRAELRRWHAPRFAVLADSGAD LLACETVPSLDEGRALVDLARGSGASAWLAFTVQGGRLRSGEPMAEGFRLANGADEIV AVGINCAHPEEVPAAIAAARGVTDRPVAVYPNSGERWDAVARAWGGDPALPSVDAWIA AGASIVGGCCRVGPDEIRRMRDALG" misc_feature complement(3134108..3134971) /gene="mmuM" /locus_tag="CMS_2974" /old_locus_tag="CMS2974" /inference="protein motif:HMMPfam:PF02574" /note="HMMPfam hit to PF02574, Homocysteine S-methyltransferase, score 2.9e-88" gene 3135160..3135693 /locus_tag="CMS_2975" /old_locus_tag="CMS2975" /db_xref="GeneID:6158814" CDS 3135160..3135693 /locus_tag="CMS_2975" /old_locus_tag="CMS2975" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711604.1" /db_xref="GI:170783270" /db_xref="GeneID:6158814" /translation="MDATVGVPMKDDDDVDLVIDAWGAAMPDVDFAPLDVVSRLRRLL PQMQRIREGAFAAEGLTTSEFEFLSVLRQQGDAGLTRAGLAERLGTDTGSLVHRVNRL TARSFITREEDPAGGRSRLVVLTPFGIERVDRAMRRLVADEDEVLADLSREQIATLID SLRVIARTTERVRARRS" misc_feature 3135337..3135654 /locus_tag="CMS_2975" /old_locus_tag="CMS2975" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 7.2e-13" gene 3135732..3136430 /locus_tag="CMS_2976" /old_locus_tag="CMS2976" /db_xref="GeneID:6158484" CDS 3135732..3136430 /locus_tag="CMS_2976" /old_locus_tag="CMS2976" /codon_start=1 /transl_table=11 /product="putative hydrolase" /protein_id="YP_001711605.1" /db_xref="GI:170783271" /db_xref="GeneID:6158484" /translation="MADIASTPPAVLFDIDETLIHTGGSGARSWAMAFRDLHDVEADI GEHSSAGETDPQVGTATFRGVMGRDPEPAELARLYASYLRHLADDIRVSEGYRVLDGA EALLDRLADAGVVLGVVSGAMEGAARTKMEPARLGRFFVFGAYGSDSPERVDVVRRAI ATAGIVRGAAPVRDEVLVVGDTPNDITSAHDAGATAVGVASGHYSADELRDAGADLVL DSLEDPALERLLGL" misc_feature 3135753..3136337 /locus_tag="CMS_2976" /old_locus_tag="CMS2976" /inference="protein motif:HMMPfam:PF00702" /note="HMMPfam hit to PF00702, Haloacid dehalogenase-like hydrolase, score 2.4e-17" gene 3136652..3136897 /locus_tag="CMS_2977" /old_locus_tag="CMS2977" /pseudo /db_xref="GeneID:6158485" gene 3136917..3137435 /locus_tag="CMS_2978" /old_locus_tag="CMS2978" /db_xref="GeneID:6158486" CDS 3136917..3137435 /locus_tag="CMS_2978" /old_locus_tag="CMS2978" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711606.1" /db_xref="GI:170783272" /db_xref="GeneID:6158486" /translation="MATSSNMPPAIEGLPRAGVVDALRIAWWMRRGFWHGFQHCRRCA RVVALYLAVAWWVLSLLVVVLHVVLVTCPWTRYYLSPDRDVVLALFGTRTGWHIGDHI SAAPGTGRGRALRARLLPELLPIADARRVTIHATAASPELAALYMAELPGLVDVGGGT FRGRRLRRPPAG" misc_feature 3137055..3137123 /locus_tag="CMS_2978" /old_locus_tag="CMS2978" /note="1 probable transmembrane helix predicted for CMS2978 by TMHMM2.0 at aa 47-69" gene 3137472..3137945 /locus_tag="CMS_2979" /old_locus_tag="CMS2979" /db_xref="GeneID:6158487" CDS 3137472..3137945 /locus_tag="CMS_2979" /old_locus_tag="CMS2979" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711607.1" /db_xref="GI:170783273" /db_xref="GeneID:6158487" /translation="MLHHPRHGRVQRGLAADPDTLALVVAGIGVELEGQRVSGRCSVR DHVPEHGPVFYLDPPVAGLEVRPRVDADVAHEAVDAARHLVHRGLSFVESIEWERPAA LVDERKRGVRQGLKPRSRRHAIIAARSAREYHGLQRATTGLTRPRYCVTDLISAL" repeat_region 3137769..3137793 /old_locus_tag="CMS2979" misc_feature 3137850..3138344 /note="submitted with no further information" misc_feature 3137871..3147889 /note="submitted with no further information" gene 3138151..3138393 /locus_tag="CMS_2980" /old_locus_tag="CMS2980" /db_xref="GeneID:6158488" CDS 3138151..3138393 /locus_tag="CMS_2980" /old_locus_tag="CMS2980" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711608.1" /db_xref="GI:170783274" /db_xref="GeneID:6158488" /translation="MRAKKLIETTFTVRKRTKRMGVSMNKRTLFSGSAITAALALAVI PMTSAQAIESSDKAREVTFTSKVQAYASANPADGEG" sig_peptide 3138151..3138303 /locus_tag="CMS_2980" /old_locus_tag="CMS2980" /note="Signal peptide predicted for CMS2980 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.986 between residues 51 and 52" misc_feature 3138235..3138303 /locus_tag="CMS_2980" /old_locus_tag="CMS2980" /note="1 probable transmembrane helix predicted for CMS2980 by TMHMM2.0 at aa 29-51" gene 3138459..3138995 /locus_tag="CMS_2981" /old_locus_tag="CMS2981" /db_xref="GeneID:6158489" CDS 3138459..3138995 /locus_tag="CMS_2981" /old_locus_tag="CMS2981" /codon_start=1 /transl_table=11 /product="hypthetical protein" /protein_id="YP_001711609.1" /db_xref="GI:170783275" /db_xref="GeneID:6158489" /translation="MPGLSGSKDGLVRPAADFPEDVFTVNVVTGTVDNIGIVTGSVNW RDEFAGQAAPVDLAALRFSTNCGTPSDLTATSTSVSGVATDRTTLRDAGVGTNAPIWN VDAVTDGFENQVDRGSFQARYDVSACGTTPVQAAFDYEGNQRGVITSVSASFSGLSVG YDNPGLTFGKSTQPITVN" gene complement(3139077..3139412) /locus_tag="CMS_2982" /old_locus_tag="CMS2982" /db_xref="GeneID:6158490" CDS complement(3139077..3139412) /locus_tag="CMS_2982" /old_locus_tag="CMS2982" /note="in mycobacterium a dominant t-cell antigen and stimulates lymphoproliferation (by similarity)." /codon_start=1 /transl_table=11 /product="putative Lsr2-like protein" /protein_id="YP_001711610.1" /db_xref="GI:170783276" /db_xref="GeneID:6158490" /translation="MTTLVDDIDGTPIEEGQGETVPFALDGVNYEIDLTDDNAAKLRT ALEDYTDKGRRVGRSTTGKAGTRRSSSSSPKGDLSAAREWLREQGHKVSERGRISADL LAEYHSATS" gene 3139569..3139958 /locus_tag="CMS_2983" /old_locus_tag="CMS2983" /db_xref="GeneID:6158491" CDS 3139569..3139958 /locus_tag="CMS_2983" /old_locus_tag="CMS2983" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711611.1" /db_xref="GI:170783277" /db_xref="GeneID:6158491" /translation="MPVSLRSGDLQSVLGIRQTTVSLWFRRGVIPGYVIGHSWFAFRS EVREWVESTANGPASRRPRDPDPLDAYRDVLSVAEVAQLLRMSQQAITGWIRDGCMPG VRDGRRWTVKKSALRELLRDSRNRKQG" gene 3140134..3140850 /locus_tag="CMS_2984" /old_locus_tag="CMS2984" /db_xref="GeneID:6158492" CDS 3140134..3140850 /locus_tag="CMS_2984" /old_locus_tag="CMS2984" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711612.1" /db_xref="GI:170783278" /db_xref="GeneID:6158492" /translation="MRLAIADPPYLGRADRWYSDGRGGGHTRTDGLWAGNGRKPDHHP DAAVWDDPAEHQALIRALERDYDGWAVAGAADSLPVLLEAAPPAAQLAVWSKPNAMPG GARLLNRWEPVLVRVPDARRRRESGPRVTDALHAAARQQGFMGAKPPEWTRWVAAMLG YDPSVDELHDLFAGSGAVASAITTYRLPAESACAFCGSPISQPSTGRRRRTCGEVCRQ RLARRASVLAGTRVTARPEV" repeat_region 3140870..3140894 gene complement(3140940..3141311) /locus_tag="CMS_2985" /old_locus_tag="CMS2985" /db_xref="GeneID:6158493" CDS complement(3140940..3141311) /locus_tag="CMS_2985" /old_locus_tag="CMS2985" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711613.1" /db_xref="GI:170783279" /db_xref="GeneID:6158493" /translation="MQDDTVENSLVPWHRRSPDGGSAQHPRRRDTYPGPRSPPLGPGH RPVVALARSDHRHRRGAEMATQLTYKRADGRWAWRLTTDNGQVIATDGSQGYENESDA QRMGDLVISGTYAGRNRLRQG" repeat_region 3141306..3141636 gene 3141677..3142288 /locus_tag="CMS_2986" /old_locus_tag="CMS2986" /db_xref="GeneID:6158494" CDS 3141677..3142288 /locus_tag="CMS_2986" /old_locus_tag="CMS2986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711614.1" /db_xref="GI:170783280" /db_xref="GeneID:6158494" /translation="MHFERVPEEGEWPAEMELTITEFPRPLMELLYVKHAWDLSPWIQ IPELDPAPSAGTSQRPAHWDLASLEQRWAEVWRANIYWNARSQGDYSDKTDLAQHFGI TGPVWWSREHGWDGLDQAAFSEWMDTLDRLKTSTVFESPERRALPDTVAAWRHGLRQI FVMPYKPSGGAEWNGPEFMTVAAGTRRDPDAYPSALRTGLAMS" gene complement(3142302..3142793) /locus_tag="CMS_2987" /old_locus_tag="CMS2987" /db_xref="GeneID:6158495" CDS complement(3142302..3142793) /locus_tag="CMS_2987" /old_locus_tag="CMS2987" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711615.1" /db_xref="GI:170783281" /db_xref="GeneID:6158495" /translation="MSFGGFDAAAAKAQGFELQTVNGRTVPVPVTAEAKREWAEASAD EAAIVHPDGTVEGNCGSSTVTAVYNGGNTIRVVTSYVVKAPAVDHAWFVDESLVATGT KVHQFNFSGLSTGRLSWTSDPQISPAIRDTQQGGSTQVTLGSHAVLLGGFVCYSGGPI DVF" gene complement(3143069..3143590) /locus_tag="CMS_2988" /old_locus_tag="CMS2988" /db_xref="GeneID:6158496" CDS complement(3143069..3143590) /locus_tag="CMS_2988" /old_locus_tag="CMS2988" /codon_start=1 /transl_table=11 /product="putative DNA invertase" /protein_id="YP_001711616.1" /db_xref="GI:170783282" /db_xref="GeneID:6158496" /translation="MTPDRIYVDHGLTGTNRNRPALGKALEACWAGDTLVVTKLDRLA RSISDARTIADELATKGVALSIGGSIHDPTDPTGRLLFNMLAMFAEFESHLIRARTRE GMKVAAKKGKLKGGKPKLSPAAERHLVALYRAGDHSISELCDLFSIGRATVYRALGRH PVEESGQVTLPPG" misc_feature complement(3143111..3143248) /locus_tag="CMS_2988" /old_locus_tag="CMS2988" /inference="protein motif:HMMPfam:PF02796" /note="HMMPfam hit to PF02796, Resolvase helix-turn-helix region, score 1.2e-06" misc_feature complement(3143252..3143590) /locus_tag="CMS_2988" /old_locus_tag="CMS2988" /inference="protein motif:HMMPfam:PF00239" /note="HMMPfam hit to PF00239, Resolvase, N-terminal,score 1.2e-15" misc_feature complement(3143459..3143497) /locus_tag="CMS_2988" /old_locus_tag="CMS2988" /note="PS00398 Site-specific recombinases signature 2." gene 3144148..3144990 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /db_xref="GeneID:6158497" CDS 3144148..3144990 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /note="in an low GC region" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001711617.1" /db_xref="GI:170783283" /db_xref="GeneID:6158497" /translation="MSTSVRIPHKSIFALLLAFATVAGCCSVAAPAQAVDRIARASLP VRAGTHLIFSESDGPTYTRDYDCTAGAVLTGSGFLSRITPYQRAVRYVATAKHCGGRG AHVHVNDVEVGSVIWESPDTDLSIVRIEPLQTTRRSCYPTSAGIRCTLTSDYEPRATG EVFAVRNRSGQESSVPVAGTKVPDAREIFCTSGYITGRLCNYVSTNRPPGLIVENQQV LAETFSTATQRGDSGGPVVSRDMKIIGIIGAGGLPGSGDETYMSYIPIAVLFREQPYY VLAT" sig_peptide 3144148..3144243 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /note="Signal peptide predicted for CMS2989 by SignalP 2.0 HMM (Signal peptide probability 0.648) with cleavage site probability 0.493 between residues 63 and 64" misc_feature 3144181..3144249 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /note="1 probable transmembrane helix predicted for CMS2989 by TMHMM2.0 at aa 43-65" misc_feature 3144190..3144222 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 3144823..3144858 /locus_tag="CMS_2989" /old_locus_tag="CMS2989" /note="PS00135 Serine proteases, trypsin family, serine active site." gene complement(3145443..3145763) /locus_tag="CMS_2990" /old_locus_tag="CMS2990" /db_xref="GeneID:6158498" CDS complement(3145443..3145763) /locus_tag="CMS_2990" /old_locus_tag="CMS2990" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711618.1" /db_xref="GI:170783284" /db_xref="REBASE:CmiSORF2990P" /db_xref="GeneID:6158498" /translation="MPRSYRFPPVPADMREDREHPDIRIARRAGTLARVAAVAHERGE VSSGLRRVIVIQAVRLADLTAARLAYADGRSRPAPTTIDVQGLVGSVMAEFGEEGLDG TSDA" gene complement(3145967..3146989) /locus_tag="CMS_2991" /old_locus_tag="CMS2991" /db_xref="GeneID:6158499" CDS complement(3145967..3146989) /locus_tag="CMS_2991" /old_locus_tag="CMS2991" /note="in a generally atypical region, low GC" /codon_start=1 /transl_table=11 /product="putative pat-1 homologue" /protein_id="YP_001711619.1" /db_xref="GI:170783285" /db_xref="GeneID:6158499" /translation="MQCAAVTPPRKFAKERGRRSRRSREAYKSNVSGHRPCTACLCTV STGIERGISRFTVMSPTFVSSISVALRGYARRRPFRTWRHRAAVVLVTAALVASATPA SAVDYERTQYPVVGGTALQMRGGYCTAGFVVKKDGFLANLSAASRATRYVVTAKHCGP VGTDVSVGGQYLGKVVWTSQISDLGMIEVAPNVRRIPHCSSRSTGISCIVITSYDPRA VGRVLLASLRTRSISTVPVTGFGDGAPSGDTDVCTSGATTGLSCLWTAHELTTEQVKY AGEHGATTSGTGLLGGDSGCPVVSTSGLLYGVHSAVFRSDPSLMTYISAGQFFLERPG YSLAPS" repeat_region 3147036..3147381 gene complement(3147346..3147771) /locus_tag="CMS_2993" /old_locus_tag="CMS2993" /db_xref="GeneID:6158500" CDS complement(3147346..3147771) /locus_tag="CMS_2993" /old_locus_tag="CMS2993" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711620.1" /db_xref="GI:170783286" /db_xref="GeneID:6158500" /translation="MKGGVRLYFTPGVLYCYSDDTTLRSWASRQDTVRSEIDREHRED DLKRSEVDRFTKQVDQELRLRNRLGGAARAIGYRAFADHAIRSSTRTCVEMRDVLMQG RVLGWDPEFRIVCADCELDYIGELIPHDTAVCPPVLRRA" gene complement(3147933..3148604) /locus_tag="CMS_2994" /old_locus_tag="CMS2994" /db_xref="GeneID:6158501" CDS complement(3147933..3148604) /locus_tag="CMS_2994" /old_locus_tag="CMS2994" /codon_start=1 /transl_table=11 /product="GntR family transcriptional regulator" /protein_id="YP_001711621.1" /db_xref="GI:170783287" /db_xref="GeneID:6158501" /translation="MPSPALVPARLGAAERVRVLLEEEILGGIIAPGSRVKADEVAQR MGTSHIPVREALRALEADGWVVHRAHEGMSVRPRVLSELVDLFEARALVEPRAVELAA GRRTADDLRELERVIRLQERAADPADLARLNYDFHVALAAAAHNSTLASVGESMSKRV RFHYLPAASARRPDSLADHRELLAMVERREGERAADIALRHIEATRVDACAALEDLLR AEAAG" misc_feature complement(3147993..3148352) /locus_tag="CMS_2994" /old_locus_tag="CMS2994" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 9.5e-23" misc_feature complement(3148380..3148568) /locus_tag="CMS_2994" /old_locus_tag="CMS2994" /inference="protein motif:HMMPfam:PF00392" /note="HMMPfam hit to PF00392, Bacterial regulatory protein, GntR, score 5.4e-12" gene 3148752..3150128 /locus_tag="CMS_2995" /old_locus_tag="CMS2995" /db_xref="GeneID:6158502" CDS 3148752..3150128 /locus_tag="CMS_2995" /old_locus_tag="CMS2995" /codon_start=1 /transl_table=11 /product="putative nucleotide transporter" /protein_id="YP_001711622.1" /db_xref="GI:170783288" /db_xref="GeneID:6158502" /translation="MSHPAAPPVARHTAPADPDPADRPAFSEYESEPVPPHARRRTSS VAAVWLGFPMILTCAVFGGLVVHSLGFWPGMGAIAVGTLVLMVYVGALSYLAGRSGES FALMAMRTFGAKGYVVPAGFLATVVIGWFAFQTGLTGSTLHGSLGWDQTGTTLVAGLL FVAVTLLGIRALSWIGVVAAPLYLVLGAVAVVIVATRSGGAELQTAPAAGAGALSFGA AVTLVVALFADSGTMTADFTRWARSGRQAVLATLAAFPFGNAVALVVGGLVVALGGAT DPGTAGGDFLGILVAQGGALVPLAVLFVVVNLGSVCAHCLYNGAVGWSQLTGMRMRRT TLVLGAVGVVLAVAGIWSYFETWLNLLGVIVPPIGAVLIVDQLLLAPRRAAAGSVGAR GAWRAPAFVGWAVGAVVALVAHAYADFLSTAVVGMVVGAVVLVAVDAAGRVRAPLGAA VEAGEARS" misc_feature 3148848..3150053 /locus_tag="CMS_2995" /old_locus_tag="CMS2995" /inference="protein motif:HMMPfam:PF02133" /note="HMMPfam hit to PF02133, Permease for cytosine/purines, uracil, thiamine, allantoin, score 7.2e-07" misc_feature order(3148893..3148961,3148974..3149042,3149079..3149147, 3149190..3149258,3149271..3149339,3149367..3149435, 3149493..3149561,3149604..3149672,3149754..3149813, 3149823..3149891,3149928..3149996,3150006..3150074) /locus_tag="CMS_2995" /old_locus_tag="CMS2995" /note="12 probable transmembrane helices predicted for CMS2995 by TMHMM2.0 at aa 48-70, 75-97, 110-132, 147-169,174-196, 206-228, 248-270, 285-307, 335-354, 358-380,393-415 and 419-441" gene 3150125..3150856 /locus_tag="CMS_2996" /old_locus_tag="CMS2996" /db_xref="GeneID:6158503" CDS 3150125..3150856 /locus_tag="CMS_2996" /old_locus_tag="CMS2996" /codon_start=1 /transl_table=11 /product="putative isochorismatase hydrolase" /protein_id="YP_001711623.1" /db_xref="GI:170783289" /db_xref="GeneID:6158503" /translation="MSAVTVPAPVAGTTAVAADPYAWPYDGAVDVARTAVVCIDWQVD FCGVGGYVDRMGYDLALTRAGLAPTARLLERVRELGMSVIHTREGHRPDLSDLPANKR WRSERAGAEIGSVGPCGRILVRGEPGWEIVPEVAPLPGEPVIDKPGKGAFYATDLDLL LRSRGIDRLILTGITTDVCVSTTMREANDRGYECLVLSDCTGATDPANHEAALRMVTM QGGVFGAVATSDAVLAALAQAVPLS" sig_peptide 3150125..3150178 /locus_tag="CMS_2996" /old_locus_tag="CMS2996" /note="Signal peptide predicted for CMS2996 by SignalP 2.0 HMM (Signal peptide probability 0.717) with cleavage site probability 0.450 between residues 18 and 19" misc_feature 3150209..3150826 /locus_tag="CMS_2996" /old_locus_tag="CMS2996" /inference="protein motif:HMMPfam:PF00857" /note="HMMPfam hit to PF00857, Isochorismatase hydrolase,score 6.2e-21" gene complement(3150835..3152235) /locus_tag="CMS_2997" /old_locus_tag="CMS2997" /pseudo /db_xref="GeneID:6158504" misc_feature complement(order(3151069..3151137,3151174..3151233, 3151243..3151296,3151315..3151383,3151549..3151617, 3151654..3151722,3151780..3151848,3151861..3151929)) /locus_tag="CMS_2997" /old_locus_tag="CMS2997" /note="8 probable transmembrane helices predicted for CMS2997 by TMHMM2.0 at aa 10-32, 37-59, 79-101, 114-136,192-214, 221-238, 242-261 and 274-296" /pseudo gene complement(3152400..3153641) /locus_tag="CMS_2998" /old_locus_tag="CMS2998" /db_xref="GeneID:6158505" CDS complement(3152400..3153641) /locus_tag="CMS_2998" /old_locus_tag="CMS2998" /codon_start=1 /transl_table=11 /product="putative nucleotide permease" /protein_id="YP_001711624.1" /db_xref="GI:170783290" /db_xref="GeneID:6158505" /translation="METSAVVGPGERLTWPRTIGLGMQHVVAMFGATFLVPALTGFPP TTTLFFSGIGTLLFLLITKNRLPSYLGSSFAFIAPITAANAATAAGGGGIGAALAGIV AVGVMLAVIGGIVQLTGTGWIDALLPPVVAGAIVALIGFNLASAARDNFVLAPVTATI TLAAVILSTVLFRGILGRLSIVLGVVVGYVVAAIRQEIDYSKLEAAAWIGLPEFHAPE ITPQFWALLPAFLPVVLVLVAENVGHIRGVAQMTDGSVNKLTGRALLADGLATVLAGL GGGSGTTTYGENIGVMAATRVYSTAAYWVAGAFAVLLGLSPKVGAVINTIPAGVLGGV TTALYGLIGIIGVKIWLDNKVDFSKPVNQLTAATALIVAIAPFTFTLGTVSFNGIALG TIAAIVIYHVMHTVARLRGTD" misc_feature complement(order(3152442..3152546,3152589..3152657, 3152676..3152744,3152787..3152855,3152916..3152984, 3153060..3153119,3153123..3153191,3153219..3153278, 3153297..3153365,3153378..3153446,3153459..3153527, 3153537..3153605)) /locus_tag="CMS_2998" /old_locus_tag="CMS2998" /note="12 probable transmembrane helices predicted for CMS2998 by TMHMM2.0 at aa 13-35, 39-61, 66-88, 93-115,122-141, 151-173, 175-194, 220-242, 263-285, 300-322,329-351 and 366-400" misc_feature complement(3152496..3153596) /locus_tag="CMS_2998" /old_locus_tag="CMS2998" /inference="protein motif:HMMPfam:PF00860" /note="HMMPfam hit to PF00860, Xanthine/uracil/vitamin C permease, score 1.5e-83" gene 3153928..3154890 /locus_tag="CMS_2999" /old_locus_tag="CMS2999" /db_xref="GeneID:6158506" CDS 3153928..3154890 /locus_tag="CMS_2999" /old_locus_tag="CMS2999" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711625.1" /db_xref="GI:170783291" /db_xref="GeneID:6158506" /translation="MSHANARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRW VARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLAARAELRFGPARLAPVTSVPART ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLARAAAYFAGR GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 3154336..3154878 /locus_tag="CMS_2999" /old_locus_tag="CMS2999" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.1e-38" gene complement(3154901..3155863) /locus_tag="CMS_3000" /old_locus_tag="CMS3000" /db_xref="GeneID:6158507" CDS complement(3154901..3155863) /locus_tag="CMS_3000" /old_locus_tag="CMS3000" /note="N/R" /codon_start=1 /transl_table=11 /product="putative insertion element ISCmi2 transposase" /protein_id="YP_001711626.1" /db_xref="GI:170783292" /db_xref="GeneID:6158507" /translation="MTHANAPFTPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRW ARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALRFTRRWGPHRISYHLRIPRSTVE RVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL GRAAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAG ITVIRVLTDNGSCYRSHAFTEALGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHP YLTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYN" misc_feature complement(3154925..3155467) /locus_tag="CMS_3000" /old_locus_tag="CMS3000" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 1.6e-41" gene complement(3155961..3156806) /locus_tag="CMS_3001" /old_locus_tag="CMS3001" /db_xref="GeneID:6158508" CDS complement(3155961..3156806) /locus_tag="CMS_3001" /old_locus_tag="CMS3001" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="YP_001711627.1" /db_xref="GI:170783293" /db_xref="GeneID:6158508" /translation="MPAKRASVPAAAPHARIRGRRVPASSRPALAAPAPESAAGRRRS NASRGLTLLTMAFVATVTIATSLPSSAFLTGQDIAQANVVTETPATSIPSQSIALSAA PEATVVGGTDDAFTATTPQQIMLAQTSKGAGAFTNDINGTIQWPFAAGVPISGVFGHR IAPCSNGCSSNHQGVDFAPGMGVPIQAIADGVVREAVTSDTGLGVHLVIDHVIDGQLI TSVYGHMLPGSLRVKAGDAVSVATQIGQVGNTGASTGPHLHLEIRVADGTAVDPFAWL QEHAN" misc_feature complement(3155991..3156299) /locus_tag="CMS_3001" /old_locus_tag="CMS3001" /inference="protein motif:HMMPfam:PF01551" /note="HMMPfam hit to PF01551, Peptidase M23B, score 1.9e-28" misc_feature complement(3156594..3156662) /locus_tag="CMS_3001" /old_locus_tag="CMS3001" /note="1 probable transmembrane helix predicted for CMS3001 by TMHMM2.0 at aa 49-71" gene 3156970..3157428 /locus_tag="CMS_3002" /old_locus_tag="CMS3002" /db_xref="GeneID:6158509" CDS 3156970..3157428 /locus_tag="CMS_3002" /old_locus_tag="CMS3002" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711628.1" /db_xref="GI:170783294" /db_xref="GeneID:6158509" /translation="MRGAGRGGDERIGGDLLGGGDLLGLSVRDAGQIGGRLDGLVHGL LGHGDRGDRGLTGLIRLRPGCGSARCPLGGQALGLAALASRRVHGPCGLVGGQHEGRR SEGWGAREAWRQDRIVELLEQGTGAARCRPSGVGACASDRFQPGRDVTDR" gene complement(3157489..3158298) /gene="suhB" /locus_tag="CMS_3003" /old_locus_tag="CMS3003" /db_xref="GeneID:6158510" CDS complement(3157489..3158298) /gene="suhB" /locus_tag="CMS_3003" /old_locus_tag="CMS3003" /EC_number="3.1.3.25" /codon_start=1 /transl_table=11 /product="inositol-1-monophosphatase" /protein_id="YP_001711629.1" /db_xref="GI:170783295" /db_xref="GeneID:6158510" /translation="MTTPGDSELLTIARDIAVRAGELALRRRREGVEVAASKSSPEDI VTHTDRETEDLIRQALRDVRPEDGFLGEESEGTSGTSGLTWVVDPIDGTVNFLYGIPA WAVSVAVVEGDADPLTWTARAGCVVNPTLGEVYTATAGGGSALDGRPLAVNAGVPLSL ALVGTGFSYGAETRMRQGRVITELLGEVRDIRRIGAASLDLCNVAAGRTDAYFERGLK PWDHSAGALIAAEAGARVTGISGGPASAELLIAADPELARALEERLERPRA" misc_feature complement(3157504..3158286) /gene="suhB" /locus_tag="CMS_3003" /old_locus_tag="CMS3003" /inference="protein motif:HMMPfam:PF00459" /note="HMMPfam hit to PF00459, Inositol monophosphatase,score 2.1e-72" misc_feature complement(3158005..3158046) /gene="suhB" /locus_tag="CMS_3003" /old_locus_tag="CMS3003" /note="PS00629 Inositol monophosphatase family signature 1." gene complement(3158343..3159086) /locus_tag="CMS_3004" /old_locus_tag="CMS3004" /db_xref="GeneID:6159003" CDS complement(3158343..3159086) /locus_tag="CMS_3004" /old_locus_tag="CMS3004" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711630.1" /db_xref="GI:170783296" /db_xref="GeneID:6159003" /translation="MSRPWPEGSYIAALLVMTTATGAIDGVSYLALDRVFTGNMTGNV LFIGFGLVGVADIPVLNNLVALVAFMLGAVIASRITRRAPTDVHLPRSSVWILVTGAL VTLALAVVWLAVGTLDTGVMIAITGFLALLLGAQAAAVKSIGLRDLSTVVVTMTMVNL SSDSRVAGGTGAAWARRIGAIVCMGLGALVAALITTHAGGAWALLAAGGLMVLGVGLL WNARRIERGRLREGAAASTDEARAAVSPA" misc_feature complement(order(3158424..3158492,3158502..3158570, 3158667..3158729,3158742..3158810,3158847..3158900, 3158913..3158972,3158991..3159059)) /locus_tag="CMS_3004" /old_locus_tag="CMS3004" /note="7 probable transmembrane helices predicted for CMS3004 by TMHMM2.0 at aa 10-32, 39-58, 63-80, 93-115,120-140, 173-195 and 199-221" misc_feature complement(3158430..3159056) /locus_tag="CMS_3004" /old_locus_tag="CMS3004" /inference="protein motif:HMMPfam:PF06912" /note="HMMPfam hit to PF06912, Protein of unknown function DUF1275, score 1e-12" gene complement(3159140..3160126) /locus_tag="CMS_3005" /old_locus_tag="CMS3005" /db_xref="GeneID:6158511" CDS complement(3159140..3160126) /locus_tag="CMS_3005" /old_locus_tag="CMS3005" /codon_start=1 /transl_table=11 /product="putative exported oxidoreductase" /protein_id="YP_001711631.1" /db_xref="GI:170783297" /db_xref="GeneID:6158511" /translation="MFPAAPGPRTRALGTSGVVVSALGLGTSGFGWTADRDEAWAILD AYREEGGTFIDTASSYSQWVPGHEGGESEAIIGGWLAARGCRDDVVVGTKVGKSRDAP GTSARSIRRGVDASLRRLGTTHVDIVHAHLDDTRTPLEETVAALSELVEEGKARLVGV SGFRPERIEQALALAHGSGAVPVGVVQEEYSLLVRDHAEGRLQAVVRQEGLGLVAHSV LAKGFLTGKYLPGAPAVPSARALDAEQHMSAGGHATVRAAEEVARTRGVTVAEVAIAW VLGRPGIASALVGARTARQIRQLMPAAQLVLDDDEVSRLASAAARATRDESA" sig_peptide complement(3159140..3159232) /locus_tag="CMS_3005" /old_locus_tag="CMS3005" /note="Signal peptide predicted for CMS3005 by SignalP 2.0 HMM (Signal peptide probability 0.950) with cleavage site probability 0.646 between residues 31 and 32" misc_feature complement(3159167..3160087) /locus_tag="CMS_3005" /old_locus_tag="CMS3005" /inference="protein motif:HMMPfam:PF00248" /note="HMMPfam hit to PF00248, Aldo/keto reductase, score 8.8e-48" misc_feature complement(3159881..3159922) /locus_tag="CMS_3005" /old_locus_tag="CMS3005" /note="PS00213 Lipocalin signature." gene complement(3160242..3160323) /locus_tag="CMS_r049" /old_locus_tag="CMSr049" /db_xref="GeneID:6158512" tRNA complement(3160242..3160323) /locus_tag="CMS_r049" /old_locus_tag="CMSr049" /product="tRNA-Tyr" /db_xref="GeneID:6158512" gene 3160445..3160942 /locus_tag="CMS_3006" /old_locus_tag="CMS3006" /db_xref="GeneID:6159067" CDS 3160445..3160942 /locus_tag="CMS_3006" /old_locus_tag="CMS3006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711632.1" /db_xref="GI:170783298" /db_xref="GeneID:6159067" /translation="MVRMADSSFDVVSKVDRMEADNAVHQTQKEVEQRYDFKNVGASI EWSGDTILMKASSEERVKAILDVLQTKMFKRGIGLKSLEEGEPFASGKEYRIEVTLKQ GIDQANAKKLGKIIRDEGPKSIKSRVEGDELRVSSKSRDDLQQTIALLKGADVDLDLQ FVNFR" misc_feature 3160460..3160939 /locus_tag="CMS_3006" /old_locus_tag="CMS3006" /inference="protein motif:HMMPfam:PF04461" /note="HMMPfam hit to PF04461, Protein of unknown function DUF520, score 3.6e-86" gene 3161048..3162505 /gene="cls" /locus_tag="CMS_3007" /old_locus_tag="CMS3007" /db_xref="GeneID:6158513" CDS 3161048..3162505 /gene="cls" /locus_tag="CMS_3007" /old_locus_tag="CMS3007" /EC_number="2.7.8.-" /codon_start=1 /transl_table=11 /product="cardiolipin synthetase" /protein_id="YP_001711633.1" /db_xref="GI:170783299" /db_xref="GeneID:6158513" /translation="MTTLILAGLAVLVDFIVRVVALLVIPRNRRPSTAMAWLMAIFFL PYLGIFLFLLIGSTRLPKRRREKQQEINRFIIESTEGIERVTREHSWPSWLDSVVELN RTLGSMPLVGGNRAKLYSHYDESIAAMTAEVDRATRYVHVEFYILAWDVTSAPFFDAL ERAVQRGVTVRVLLDHIASLRAPGYKRTTRKLTAIGADWNLMLPVQPLRGRYQRPDLR NHRKVLVIDGRVGFMGSQNMVHRSYDKVVNRKRGLKWQDLMTRLEGPIVSGLNAIFIT DWYAETDQLLVRETDPIEVAASDDDEELDCQVVPSGPGFPGENNLRLFNALLYYAQER IVITSPYFVPDDSMRYAITTAVQRGLSVELFVSEIGDQPVVYHAQRSYYEELLNAGVR IWMYRAPYILHSKHFTIDDDVAVIGSSNMDMRSFSLNMEVSLMVRGPGFVREMRRIED GYRKRSRELTLEEWSRRTRSSTVLDNLARLTSGVQ" misc_feature order(3161057..3161125,3161144..3161212) /gene="cls" /locus_tag="CMS_3007" /old_locus_tag="CMS3007" /note="2 probable transmembrane helices predicted for CMS3007 by TMHMM2.0 at aa 4-26 and 33-55" misc_feature 3161690..3161773 /gene="cls" /locus_tag="CMS_3007" /old_locus_tag="CMS3007" /inference="protein motif:HMMPfam:PF00614" /note="HMMPfam hit to PF00614, Phospholipase D/Transphosphatidylase, score 5e-05" misc_feature 3162239..3162322 /gene="cls" /locus_tag="CMS_3007" /old_locus_tag="CMS3007" /inference="protein motif:HMMPfam:PF00614" /note="HMMPfam hit to PF00614, Phospholipase D/Transphosphatidylase, score 6.7e-06" gene complement(3162579..3163172) /locus_tag="CMS_3008" /old_locus_tag="CMS3008" /db_xref="GeneID:6158636" CDS complement(3162579..3163172) /locus_tag="CMS_3008" /old_locus_tag="CMS3008" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="YP_001711634.1" /db_xref="GI:170783300" /db_xref="GeneID:6158636" /translation="MRGDPRALSGVRWRECPRPRHRRTDEPEDEEMAQRSLSLLQDET GVLLAAASRAVVSLYRPLLQPLNLTHPQYLVLLALDEEEPQAVVDLAEKLHLTPGTLS PLLKRLEVFGYVSRFRDATDERRLSVGLTHAGRDMLPVIWRVGDQVRRDIAGDDVDDS RLRDLLQGVLDRATAHEQAHDHADDHEDEDAADAGQA" misc_feature complement(3162666..3162971) /locus_tag="CMS_3008" /old_locus_tag="CMS3008" /inference="protein motif:HMMPfam:PF01047" /note="HMMPfam hit to PF01047, Bacterial regulatory protein, MarR, score 4.4e-12" gene complement(3163203..3163829) /locus_tag="CMS_3009" /old_locus_tag="CMS3009" /db_xref="GeneID:6158514" CDS complement(3163203..3163829) /locus_tag="CMS_3009" /old_locus_tag="CMS3009" /codon_start=1 /transl_table=11 /product="putative type IV leader peptidase" /protein_id="YP_001711635.1" /db_xref="GI:170783301" /db_xref="GeneID:6158514" /translation="MIPASAPALLVAVGIAGAALGAASPALARAALAGGRRPDGLDAR PLDPLPGLGRVAAVVAALVAGTLAALVVAETPPARIPVALLVVAVGPVLVLADLAAHR LPDRATAPAAVAAAALALVAGGSGLLVQAAACGAGDVKLAGVIGLALGQLGPAQVALG LAAGTMLGGVATTALLVAGRARASTAVPFGPWLVLGALVVVSAPRTLA" sig_peptide complement(3163203..3163286) /locus_tag="CMS_3009" /old_locus_tag="CMS3009" /note="Signal peptide predicted for CMS3009 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.549 between residues 28 and 29" misc_feature complement(order(3163221..3163274,3163293..3163361, 3163431..3163499,3163533..3163601,3163611..3163679, 3163734..3163802)) /locus_tag="CMS_3009" /old_locus_tag="CMS3009" /note="6 probable transmembrane helices predicted for CMS3009 by TMHMM2.0 at aa 10-32, 51-73, 77-99, 111-133,157-179 and 186-203" misc_feature complement(3163311..3163571) /locus_tag="CMS_3009" /old_locus_tag="CMS3009" /inference="protein motif:HMMPfam:PF01478" /note="HMMPfam hit to PF01478, Peptidase A24A, prepilin type IV, score 0.00014" gene complement(3163962..3165332) /gene="fprA" /locus_tag="CMS_3010" /old_locus_tag="CMS3010" /db_xref="GeneID:6158515" CDS complement(3163962..3165332) /gene="fprA" /locus_tag="CMS_3010" /old_locus_tag="CMS3010" /EC_number="1.18.1.2" /codon_start=1 /transl_table=11 /product="NADPH-ferredoxin reductase" /protein_id="YP_001711636.1" /db_xref="GI:170783302" /db_xref="GeneID:6158515" /translation="MTKLRLAIVGAGPAGIYAADIILKAEKQFNVSIDLFERLPAPYG LVRYGVAPDHPRIKGIIGALRDVLDRGDIRIFGNVDYGRDITLEDLQKHYNAVIFSTG AIRDAELDIPGIDLPGSNGAADFVNWFDGHPDFPRDWPLDAREVAVIGNGNVALDVAR MLAKHADDLLPTEIPDNVYTGLKHSPVTDVHVFGRRGPAQVKFTPLELRELGEVPDVD VIVYDEDFGVDPAAEEAAKTNKQVMVISRVLEKWRTRETGSASRRLHLHFYSRPAEVL ASDDAEPRVAGLRIERTRPDGLGGVEGTGEYRDVPVQAVYRAVGYFGSPVDGIPFDER RGVIPNHEGQVLDMDNNRIPGVYATGWIKRGPIGLIGHTKSDAMETVSHVLNDQGDWW TPEAPEEQAIVDLLAERGIEYTDLAGWHALDEHEIALGQPHGRARIKVVERDEMLEAS RPRQSV" sig_peptide complement(3163962..3164015) /gene="fprA" /locus_tag="CMS_3010" /old_locus_tag="CMS3010" /note="Signal peptide predicted for CMS3010 by SignalP 2.0 HMM (Signal peptide probability 0.941) with cleavage site probability 0.900 between residues 18 and 19" gene complement(3165424..3166401) /locus_tag="CMS_3011" /old_locus_tag="CMS3011" /db_xref="GeneID:6158692" CDS complement(3165424..3166401) /locus_tag="CMS_3011" /old_locus_tag="CMS3011" /codon_start=1 /transl_table=11 /product="putative polyprenyl diphosphate synthase" /protein_id="YP_001711637.1" /db_xref="GI:170783303" /db_xref="GeneID:6158692" /translation="MARSIDDGLALVEEQLLREVRFADDVADVTTRYLLDAGGKRVRP MLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDVMDEADMRRGVPSAQAVWGNSV AILAGDLLFARASKIVADLGPRAIRLQAATFERLVLGQLHETIGPREGQDPIEHYLDV LADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGVAFQLVDDVLDLADQPEETG KLAGTDLRAGVATLPLLYLRRLAETDAAAAALLARIQRDVEHEETPESEADLTAAIAE LRDHEVTARTIAEAHRWAAEAVEALAPLPQGPVKKALTRFADTIVERTR" misc_feature complement(3165574..3166326) /locus_tag="CMS_3011" /old_locus_tag="CMS3011" /inference="protein motif:HMMPfam:PF00348" /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score 3.5e-52" gene complement(3166533..3167270) /gene="ubiE" /locus_tag="CMS_3012" /old_locus_tag="CMS3012" /db_xref="GeneID:6158516" CDS complement(3166533..3167270) /gene="ubiE" /locus_tag="CMS_3012" /old_locus_tag="CMS3012" /EC_number="2.1.1.-" /codon_start=1 /transl_table=11 /product="menaquinone biosynthesis methyltransferase" /protein_id="YP_001711638.1" /db_xref="GI:170783304" /db_xref="GeneID:6158516" /translation="MMRADLSKKPGQVSAMFDEVSSAYDRTNTLLSVGNDQLWRVATT RAVAPVAGERILDLAAGTGTSSAALAASGAHVVAADFSEGMLEVGRRRLAGDDRVEFV HADATDLPFDDDSFDAVTISFGLRNVVEPRKGLDELLRVLKPGGRIVICEFSTPPVPL VRRGYDLYMKAVAPSLVKLVSSNASAYEYLNESIQAWPDQETLSSWLRAAGFASVEHR NLTAGIVALHRGVKPAGRHAAPRPAAS" misc_feature complement(3166575..3167270) /gene="ubiE" /locus_tag="CMS_3012" /old_locus_tag="CMS3012" /inference="protein motif:HMMPfam:PF01209" /note="HMMPfam hit to PF01209, UbiE/COQ5 methyltransferase, score 3.3e-71" gene 3167428..3168702 /gene="menF" /locus_tag="CMS_3013" /old_locus_tag="CMS3013" /db_xref="GeneID:6159084" CDS 3167428..3168702 /gene="menF" /locus_tag="CMS_3013" /old_locus_tag="CMS3013" /EC_number="5.4.4.2" /codon_start=1 /transl_table=11 /product="menaquinone-specific isochorismate synthase (isochorismate mutase)" /protein_id="YP_001711639.1" /db_xref="GI:170783305" /db_xref="GeneID:6159084" /translation="MTASRVRALLVDTTPVDSIARLVPLIDARHPLLWLRHGSGMGGI GEALRLEFRGPDRVRDAAAAWREVAAAATVTDPLGIPGTGLIAFGAFAFADDSAAASV LVVPRVVVGRRDGVSWVTRIRLADQEDGDVASPLDALAVGSLPVPEDSGAEYRLHLRP GSMGPDDYEAAVASAVAAISAGDVQKVVLARDLVGRLPLGGDLRLALSRFALGYPDCW TYAVDGLIGASPETLVRVGGGTVGARVLAGTVSRGADARADAAAAAGLAASPKDNEEH AFARDSVLDALRPHSRDLSTTDAPFTLKLPNLWHLASDVTGTLGDGSSSLDLVGALHP TAAVAGHPTAAALELIAELEPTDRGRYAGPIGWVAADGDGEWAIALRGAQVDPSGAIV AHAGAGIVAGSDPERERAETAMKFRPVVEALG" misc_feature 3167917..3168696 /gene="menF" /locus_tag="CMS_3013" /old_locus_tag="CMS3013" /inference="protein motif:HMMPfam:PF00425" /note="HMMPfam hit to PF00425, Anthranilate synthase component I and chorismate binding protein, score 3.1e-55" gene complement(3168699..3169928) /locus_tag="CMS_3014" /old_locus_tag="CMS3014" /db_xref="GeneID:6158809" CDS complement(3168699..3169928) /locus_tag="CMS_3014" /old_locus_tag="CMS3014" /codon_start=1 /transl_table=11 /product="integral membrane transport protein" /protein_id="YP_001711640.1" /db_xref="GI:170783306" /db_xref="GeneID:6158809" /translation="MSAAAPASASASASASARTGYLAILALPGALRVFLPAMLGRLSF AMVSLALLLLIQSASGSFAAAGIATGAFGLANVLASPMRARLVDARGQRPVLVALALG HAAGLVALVAAVRADAPAAVIVVVAATAGLLLPPLGAAMRVVWAALVPDVRMRTRAYS LDAVGEEIVFTVGPLVVGTLGMTSSPLSRAQGPRADPEHARTRTRARASDPLRQPLVV PLLVTLVGVGAVLGAVEVAAAALAERAGSTALAGPLLAAFAAGSAVGGLAYGTRAWRV PARIRLVVLAAAMVAATAVLALVALRVPDAPGPLALVAVAVLLVPVGLFLAPAMATGY LLADEQTAAEVRTEASAWVNTAVNTGVALAAAGVGAVVDAAGPVPGIVAGAVAALVVA GIAAPSLLRRRAPAEQT" sig_peptide complement(3168699..3168887) /locus_tag="CMS_3014" /old_locus_tag="CMS3014" /note="Signal peptide predicted for CMS3014 by SignalP 2.0 HMM (Signal peptide probability 0.914) with cleavage site probability 0.560 between residues 63 and 64" misc_feature complement(order(3168729..3168788,3168816..3168884, 3168921..3168989,3169017..3169085,3169119..3169187, 3169215..3169283,3169491..3169559,3169587..3169646, 3169707..3169775,3169803..3169871)) /locus_tag="CMS_3014" /old_locus_tag="CMS3014" /note="10 probable transmembrane helices predicted for CMS3014 by TMHMM2.0 at aa 20-42, 52-74, 95-114, 124-146,216-238, 248-270, 282-304, 314-336, 349-371 and 381-400" misc_feature complement(3168810..3169832) /locus_tag="CMS_3014" /old_locus_tag="CMS3014" /inference="protein motif:HMMPfam:PF07690" /note="HMMPfam hit to PF07690, Major Facilitator Superfamily" gene complement(3169925..3170491) /locus_tag="CMS_3015" /old_locus_tag="CMS3015" /db_xref="GeneID:6158517" CDS complement(3169925..3170491) /locus_tag="CMS_3015" /old_locus_tag="CMS3015" /codon_start=1 /transl_table=11 /product="ArsR family transcriptional regulator" /protein_id="YP_001711641.1" /db_xref="GI:170783307" /db_xref="GeneID:6158517" /translation="MVGWRVPAEQNDLRDLRVIAHPLRLRLLSLCTRSPVSASEAARE LGETQANVSYHLRRLREAGLLEEAGVERIRGGAARRYRHVPASGERLATVADGGLPLV AAALAAELTRRAALHAEGTRPVITDAALTVSTGTWIRVQDLARELGTVLHDDSARRPG DEDVAVSATVALFRTAATPAPTSADPVA" misc_feature complement(3170189..3170446) /locus_tag="CMS_3015" /old_locus_tag="CMS3015" /inference="protein motif:HMMPfam:PF01022" /note="HMMPfam hit to PF01022, Bacterial regulatory protein, ArsR, score 2.8e-09" gene 3170538..3171308 /locus_tag="CMS_3016" /old_locus_tag="CMS3016" /db_xref="GeneID:6158518" CDS 3170538..3171308 /locus_tag="CMS_3016" /old_locus_tag="CMS3016" /codon_start=1 /transl_table=11 /product="putative tyrosine-protein phosphatase" /protein_id="YP_001711642.1" /db_xref="GI:170783308" /db_xref="GeneID:6158518" /translation="MRMRRRPWSTRSMTASDRTLPIDGLVNGRDLGSIRLRDGGTTPT GVLARCEDADLITDAGWERVRELGFRTVLDLRQPGERARDTHPRPGWIHVAHVDLDGL DDHPDFWVPYWDTGLVGTPLYYLPHLAELPERAGSALRAILEAPAGGVLFHCGAGRDR TGLVALLLLLAVGAEPDEIVDDYLEAIRLGPERSANSGQPDMEPAIEAFLAERGTTSE AAFQDAMDGVDLDGLLEAVGFTDAERRALRTWRGAIPA" misc_feature 3170991..3171029 /locus_tag="CMS_3016" /old_locus_tag="CMS3016" /note="PS00383 Tyrosine specific protein phosphatases active site." gene complement(3171342..3173111) /gene="menD" /locus_tag="CMS_3017" /old_locus_tag="CMS3017" /db_xref="GeneID:6158519" CDS complement(3171342..3173111) /gene="menD" /locus_tag="CMS_3017" /old_locus_tag="CMS3017" /EC_number="4.1.1.71" /codon_start=1 /transl_table=11 /product="menaquinone biosynthesis protein MenD" /protein_id="YP_001711643.1" /db_xref="GI:170783309" /db_xref="GeneID:6158519" /translation="MAAADALPTSSASASASADGPRTGNPSTDRAIAMLLALVREGVT DVVLCPGSRSQALALVAAELERVDGVRLHVRIDERAAGFLALGLGVESGRPAPVITTS GTAVANLHPAVLEGWHSGVPMLLLTGDRPAELRGIASNQTTRQPGMFGDRVACIDVPA PEETDDDLARDALLARDAYRRARDERTPVHVNVAFRDPLSVAVPDLTEAVAEVRAAAP ATPAPAGPATADVLDLPHGPRTLVVAGHAAGEAAEELARAGGWPLAAEISSGSHFGPN LVVSFRELLAREGFGDRVERVIVFGHPTLTREVPLLVGREDVEAIVVGSTGGEDYDPR HRVTAHPAAVRVVGEPADPAEARRWLGTWVHESRAILDEATAAESAPLLPSGTTPAER RDFARAELAAVRADVTRRHLVRALWQATWPHDRLVLGASRLIREADRALPGKRVRVHA NRGLAGIDGTISTGLGIALASQAGSGSAAAGITRVLVGDLTLLHDVGSLLIGTGERVP RIQVIVGNDGGGTIFDGLEVSRTAAPASIDRVMFTPQRVDLASLARAYGWAHLRAATH GELEAALTTASEAPLLIEVPLAR" gene complement(3173116..3173550) /locus_tag="CMS_3018" /old_locus_tag="CMS3018" /db_xref="GeneID:6158807" CDS complement(3173116..3173550) /locus_tag="CMS_3018" /old_locus_tag="CMS3018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711644.1" /db_xref="GI:170783310" /db_xref="GeneID:6158807" /translation="MPRLLIGLAVVIVFFTVFVIVDTSLTPRTRMRGLPKPAWIAVVV LVPLIGGILWLTIGKDRTDLARASGRRLGPDDDPDFLSGLGRTRSEEERIRRLEQELA DLDSDGTGPDADGPTSAGGTGTAPRPSPDGDDDRGAPGRRDA" sig_peptide complement(3173116..3173178) /locus_tag="CMS_3018" /old_locus_tag="CMS3018" /note="Signal peptide predicted for CMS3018 by SignalP 2.0 HMM (Signal peptide probability 0.927) with cleavage site probability 0.316 between residues 21 and 22" misc_feature complement(order(3173380..3173439,3173482..3173538)) /locus_tag="CMS_3018" /old_locus_tag="CMS3018" /note="2 probable transmembrane helices predicted for CMS3018 by TMHMM2.0 at aa 5-23 and 38-57" gene 3173690..3174076 /locus_tag="CMS_3019" /old_locus_tag="CMS3019" /db_xref="GeneID:6158520" CDS 3173690..3174076 /locus_tag="CMS_3019" /old_locus_tag="CMS3019" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711645.1" /db_xref="GI:170783311" /db_xref="GeneID:6158520" /translation="MSSRRYWLVYTVVRILLFAVPFGLVVAVSPDFWPLAAIIGAVVS FCGSYIFLRKQREAMAADLAAVAAGRRKPVEDDDSEDAAVDAAERRVRAAGSADVATG ATGTPGAGTPDIAAAAPRVDGEAERS" sig_peptide 3173690..3173812 /locus_tag="CMS_3019" /old_locus_tag="CMS3019" /note="Signal peptide predicted for CMS3019 by SignalP 2.0 HMM (Signal peptide probability 0.880) with cleavage site probability 0.559 between residues 41 and 42" misc_feature order(3173708..3173776,3173786..3173845) /locus_tag="CMS_3019" /old_locus_tag="CMS3019" /note="2 probable transmembrane helices predicted for CMS3019 by TMHMM2.0 at aa 7-29 and 33-52" gene complement(3174087..3174464) /locus_tag="CMS_3020" /old_locus_tag="CMS3020" /db_xref="GeneID:6158521" CDS complement(3174087..3174464) /locus_tag="CMS_3020" /old_locus_tag="CMS3020" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711646.1" /db_xref="GI:170783312" /db_xref="GeneID:6158521" /translation="MDPAFVQALDADHETWPTDDPRLLALRQRSGARRRSVLVVDAAL EAWWAGRRAADPERAAAALAARVARAIEEAGPGERYLVLDGGRLTPSTRTTPPAVRDT APTTGGRRVAYVPIERDGPPDPA" gene complement(3174470..3175354) /gene="menA" /locus_tag="CMS_3021" /old_locus_tag="CMS3021" /db_xref="GeneID:6158522" CDS complement(3174470..3175354) /gene="menA" /locus_tag="CMS_3021" /old_locus_tag="CMS3021" /EC_number="2.5.1.-" /note="catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" /protein_id="YP_001711647.1" /db_xref="GI:170783313" /db_xref="GeneID:6158522" /translation="MRTATARDWISGARIRTLPLAVAPVAIGAGAARAMGPDEGVSLG LALLCLAVAVLLQIGVNYANDYSDGVRGTDDVRVGPARLTGSGAAKPRTVLTVALTFL GLAAVAGLAIVLITGHWWLLAVGAVAIVAAYFYTGGKRPYGYAGLGDVVVFVFFGLVA TAGTQFILIGMITGEGWLGGVAAGGFACAVLMVNNIRDIEQDGKVGKRTLAVRLGPRG SRIVYCIEVAIAYAVVVFFFLFYPKALLVLFTLVLALPAAIIACTGRTPKELILSLQL TSMAALTFGLGLGAAFAF" sig_peptide complement(3174470..3174571) /gene="menA" /locus_tag="CMS_3021" /old_locus_tag="CMS3021" /note="Signal peptide predicted for CMS3021 by SignalP 2.0 HMM (Signal peptide probability 0.643) with cleavage site probability 0.458 between residues 34 and 35" misc_feature complement(order(3174479..3174547,3174566..3174625, 3174635..3174703,3174764..3174829,3174839..3174907, 3174941..3175000,3175010..3175078,3175166..3175234, 3175262..3175321)) /gene="menA" /locus_tag="CMS_3021" /old_locus_tag="CMS3021" /note="9 probable transmembrane helices predicted for CMS3021 by TMHMM2.0 at aa 12-31, 41-63, 93-115, 119-138,150-172, 176-197, 218-240, 244-263 and 270-292" misc_feature complement(3174479..3175303) /gene="menA" /locus_tag="CMS_3021" /old_locus_tag="CMS3021" /inference="protein motif:HMMPfam:PF01040" /note="HMMPfam hit to PF01040, UbiA prenyltransferase,score 4e-20" gene complement(3175561..3176313) /locus_tag="CMS_3022" /old_locus_tag="CMS3022" /db_xref="GeneID:6158804" CDS complement(3175561..3176313) /locus_tag="CMS_3022" /old_locus_tag="CMS3022" /codon_start=1 /transl_table=11 /product="putative phosphoglycerate mutase" /protein_id="YP_001711648.1" /db_xref="GI:170783314" /db_xref="GeneID:6158804" /translation="MTGMNPATAKRLARDDVAPMYAEVDAAIARAEIPGTPEWQEKVR GRIVMVRHGQTEWSVNGRHTGTTDIPLTETGEEQARAVGGVLAGTEFGLVLASPRSRA QRTAELIGYGDQAEVDDRLVEFDYGAYEGRTTADIQSERGHWDLWTDGVPAGDTPGET SQQVRDRVLQVLDRVLPVLESGQDVLLVAHAHVIRALAVAWVGLPAEAGGILTLSTST LSELGFEHGRHAIMRWNCPADGWAPSPVGGSR" misc_feature complement(3175612..3176181) /locus_tag="CMS_3022" /old_locus_tag="CMS3022" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 5.4e-31" gene complement(3176413..3177321) /locus_tag="CMS_3023" /old_locus_tag="CMS3023" /db_xref="GeneID:6158523" CDS complement(3176413..3177321) /locus_tag="CMS_3023" /old_locus_tag="CMS3023" /codon_start=1 /transl_table=11 /product="putative beta-lactamase" /protein_id="YP_001711649.1" /db_xref="GI:170783315" /db_xref="GeneID:6158523" /translation="MAAAGEDPRRRPRHTGGGAARHAGQEPTDGFRSPFRALGGLALD GMRVAARATDLDSGDVVLSVDDHVALPAAGLGRVLLLVELSARMTGGDLSPLHPVDRL SDDEGGTASLWRHLVVPSLPVTDLASLVGATGDAAATNALLGLVGLDAVRTRAESLGL RRTALLDMARGTRGPDDAPQLSVGSACELASLFASLVHGEVVDEETSTRVVGWLALNT DRSLVAASFGLDAPVGRGGEHGMALVDCTGVDAGVRAEAGVLRGPRGAVAYAVMVHFD DADLRARLAVRDALGVVGLDLLEHVH" gene complement(3177333..3179315) /locus_tag="CMS_3024" /old_locus_tag="CMS3024" /db_xref="GeneID:6158524" CDS complement(3177333..3179315) /locus_tag="CMS_3024" /old_locus_tag="CMS3024" /codon_start=1 /transl_table=11 /product="putative metallopeptidase" /protein_id="YP_001711650.1" /db_xref="GI:170783316" /db_xref="GeneID:6158524" /translation="MSAETPPTGIRTDELDQGVRPQDDLYLHVNGRWLDRTEIPDDKA RWGSFHQLAEAAEEAVRVIIEEAVDAEPGTEERKTGDLFTSFMDEERVERLGVEPIRD HLDAAAAVTDVPSFLRTLGTLEQTNVSGLLGLFVDNDPGDPERYVVQIEQGGIGLPDE SYYREEGHAAIRDAYRAFVERMLGLAQLDDPAGRADRILDLETRIAAFHWDNVRTRDS QATYNLVTWAELRELVATAAGADLDVWRDALEAPAAALDEVVLREPSFAEGLGALLTE AEIPALRDWLTWQVVRSNAALLPRLFSEASFDFYGRTLTGAPEQRVRWKRGVSLVEGS MGEAIGRIYVERHFSPTAKAEMDVLVGHLVEAYRRSISGLEWMTGETRSRALEKLEKF TPKIGFPDKWRDYSALEIDPTDLVGNVRATARFETRRELAKIGAPLDRDEWFMTPQTI NAYYNPGFNEIVFPAAILQFPFFDEARDPAANYGAIGAVIGHEIGHGFDDQGSRYDGD GRLTDWWTPADRAAFEERTASLIQQYDALVPAQLTGPDAPHVNGALTIGENIGDLGGL SIAWKAYLLSLDGAEPPVIDGLTGAERFFLSWAQAWQQKGRDAEVQRLLAIDPHAPNE FRCNQIVRNIDAFYDTFGVEPGDGLWLDEEARVTIW" misc_feature complement(3177345..3177965) /locus_tag="CMS_3024" /old_locus_tag="CMS3024" /inference="protein motif:HMMPfam:PF01431" /note="HMMPfam hit to PF01431, Peptidase M13, neprilysin,score 4.6e-84" misc_feature complement(3177822..3177851) /locus_tag="CMS_3024" /old_locus_tag="CMS3024" /note="PS00142 Neutral zinc metallopeptidases,zinc-binding region signature." misc_feature complement(3178119..3179258) /locus_tag="CMS_3024" /old_locus_tag="CMS3024" /inference="protein motif:HMMPfam:PF05649" /note="HMMPfam hit to PF05649, Peptidase M13, score 1.4e-121" gene complement(3179340..3180302) /locus_tag="CMS_3025" /old_locus_tag="CMS3025" /db_xref="GeneID:6158525" CDS complement(3179340..3180302) /locus_tag="CMS_3025" /old_locus_tag="CMS3025" /note="Nu/R" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711651.1" /db_xref="GI:170783317" /db_xref="GeneID:6158525" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGR GITRIERVITDNAFAYRHSTVFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature complement(3179352..3179894) /locus_tag="CMS_3025" /old_locus_tag="CMS3025" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 5.7e-38" gene complement(3180419..3180604) /locus_tag="CMS_3026" /old_locus_tag="CMS3026" /pseudo /db_xref="GeneID:6158526" misc_feature 3180644..3181832 /note="atypical" gene 3180656..3180772 /locus_tag="CMS_3027" /old_locus_tag="CMS3027" /db_xref="GeneID:6158527" CDS 3180656..3180772 /locus_tag="CMS_3027" /old_locus_tag="CMS3027" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711652.1" /db_xref="GI:170783318" /db_xref="GeneID:6158527" /translation="MAEGAVLEPDWWSTRAQARLYVEELQENDFPAAPSSMY" gene complement(3180782..3181174) /locus_tag="CMS_3028" /old_locus_tag="CMS3028" /db_xref="GeneID:6158528" CDS complement(3180782..3181174) /locus_tag="CMS_3028" /old_locus_tag="CMS3028" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711653.1" /db_xref="GI:170783319" /db_xref="GeneID:6158528" /translation="MRDWTRLTRPAITIGVTAVLLGGGTAAQAADVTPDSECAGDGPD ISVTDVVDTYIPGDFRAYGDGGAVLTIAAGQSSTAKADVSVSGTLSADAVVASASVTA GVTLGVSETVSQQASASYTVPADLNGPC" sig_peptide complement(3180782..3180868) /locus_tag="CMS_3028" /old_locus_tag="CMS3028" /note="Signal peptide predicted for CMS3028 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.990 between residues 29 and 30" gene complement(3181183..3181671) /locus_tag="CMS_3029" /old_locus_tag="CMS3029" /db_xref="GeneID:6158529" CDS complement(3181183..3181671) /locus_tag="CMS_3029" /old_locus_tag="CMS3029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711654.1" /db_xref="GI:170783320" /db_xref="GeneID:6158529" /translation="MCRAPSTLIACAAVITSLSLSGCTDLDTASAPPPDSSPTSSPAA EGPSDDTRFADMDARVAATYPVRESTGTFTGDQNGVLTLRPPGDPATTKVVMMLTCTG SGTYWIDVEQAKPNRVGATCGDSGTSIAAVPLDDPTASTTLDVSIPNGSRYWLTTYYT TK" sig_peptide complement(3181183..3181311) /locus_tag="CMS_3029" /old_locus_tag="CMS3029" /note="Signal peptide predicted for CMS3029 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.635 between residues 43 and 44" misc_feature complement(3181603..3181635) /locus_tag="CMS_3029" /old_locus_tag="CMS3029" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene complement(3181865..3182470) /gene="dcd" /locus_tag="CMS_3030" /old_locus_tag="CMS3030" /db_xref="GeneID:6158530" CDS complement(3181865..3182470) /gene="dcd" /locus_tag="CMS_3030" /old_locus_tag="CMS3030" /EC_number="3.5.4.13" /note="Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis" /codon_start=1 /transl_table=11 /product="deoxycytidine triphosphate deaminase" /protein_id="YP_001711655.1" /db_xref="GI:170783321" /db_xref="GeneID:6158530" /translation="MLLSDRDITAELDAGRVALDPYDPGMLQPASIDVRIDRFFRLFD NHKYPYIDPAEDQPELTRLIEAKQGDPFILHPGEFVLGSTFEMVTLPDDVAARLEGKS SLGRLGLLTHSTAGFIDPGFSGHVTLELSNVATLPIKLWPGMKIGQLCFFRLSSPAEK PYGSGEYASRYQGQRGPTASRSYLNFQHTDVTVTDAGQSGE" misc_feature complement(3181928..3182326) /gene="dcd" /locus_tag="CMS_3030" /old_locus_tag="CMS3030" /inference="protein motif:HMMPfam:PF00692" /note="HMMPfam hit to PF00692, DeoxyUTP pyrophosphatase,score 9.2e-13" misc_feature complement(3182165..3182188) /gene="dcd" /locus_tag="CMS_3030" /old_locus_tag="CMS3030" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 3182552..3182622 /locus_tag="CMS_r036" /old_locus_tag="CMSr036" /db_xref="GeneID:6158655" tRNA 3182552..3182622 /locus_tag="CMS_r036" /old_locus_tag="CMSr036" /product="tRNA-Gly" /db_xref="GeneID:6158655" misc_feature 3182629..3186787 /note="submitted with no further information" gene 3182780..3183847 /locus_tag="CMS_3031" /old_locus_tag="CMS3031" /db_xref="GeneID:6159041" CDS 3182780..3183847 /locus_tag="CMS_3031" /old_locus_tag="CMS3031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711656.1" /db_xref="GI:170783322" /db_xref="GeneID:6159041" /translation="MFTFQHGSDQSETLLRALSLEARGAVSGGGVFAWTTTYGATAFF SDPEIAQLLKLRTFRLIVGTDAITDVAAIRKLQQLSADHPHLQVEALVNPTSSLFHPK FAWFQHVTHTSLIVGSGNLTRGGLLSNWEAFTAIRIQNEDEATALGQISQFFQNQAAN IRNLDDPDVLARVANNSGSERRLKHEAARVVSAEPDKVVSDSASVFITEIPKSGNRWS QVNINRASFESFFGVQAVHSRQLLFQQVLASGELGDAESRKSVVVKSQNYRFELSAAR GLEYPPTGRPIAVFVKIDNDQIVYSLVMPSQSVHSELDAYLNATGPNRIDRMRKVRCT GIELRRAIPSLPLLQATLPDA" gene complement(3183844..3185292) /locus_tag="CMS_3032" /old_locus_tag="CMS3032" /db_xref="GeneID:6158531" CDS complement(3183844..3185292) /locus_tag="CMS_3032" /old_locus_tag="CMS3032" /codon_start=1 /transl_table=11 /product="putative restriction-modification system methyltransferase" /protein_id="YP_001711657.1" /db_xref="GI:170783323" /db_xref="GeneID:6158531" /translation="MCILQPSNGARRAGRRAGVLGRSMLGQHRREAHCRSLGRGGIES RNWSEIINDESGMRPIHYLGNKTRYLAEISSAVESVASPGKVAVDLFSGSGVVARSLA QERPVLASDVQHYSAILSSALCKSRHQDMLYAAPIISKATDWLGSLGNELTDLLKYED DALASVSQNPDAYADYVEKGIIASGDLKTSAYSRLLSRAASVLEAAGGTVSRYYGGAY FSFRQALEIDALSAAIKYERSSPGGDTFLAALLGSASDSVGTVGNHFAQPMRLRDRVG VLKMAAIQRSVANRTASAFNLFEKKLSQYNDLTPTAYECTTAVGDYRDILSALKRNTS VIYADPPYTRDHYSRFYHVLETIALGDDPGVASAPGSSSPSRGLYRKERHQSPFSIRS QASKAFEDLFSLARQKEAAIVLSYSPQGQGTKARPNTRLISIDELVQIAKVHFAKVDV MRIEKSVHSKFNATRFNGVAAPQAEVMISASL" misc_feature complement(3184267..3184287) /locus_tag="CMS_3032" /old_locus_tag="CMS3032" /note="PS00092 N-6 Adenine-specific DNA methylases signature." gene 3185397..3186572 /locus_tag="CMS_3033" /old_locus_tag="CMS3033" /db_xref="GeneID:6158532" CDS 3185397..3186572 /locus_tag="CMS_3033" /old_locus_tag="CMS3033" /codon_start=1 /transl_table=11 /product="putative restriction-modification system methyltransferase" /protein_id="YP_001711658.1" /db_xref="GI:170783324" /db_xref="GeneID:6158532" /translation="MGLSMTTEHVAADDQGVLPLDRAVEVDAKPIEDAPEQNEVPATH IAVAGALMVGDASSALRVLHADPERLESIKLCYLDPPYNTGETFRHYSDKRDSNEWIS ELRGHLTALIPLLAPDASVWLHLDDSEQHRARVVMDEVFGREAFVSTIIWQKRKSRDN RKAFSSMHDYIHVYALSGPKSWKRVRHGLPDQGTFANPDNDPRGPWRSAPMSVQAGHA TQNQFYTVVTPSGARHDPPPGRCWTFSKMRLEELVRDGRVYWPRGGAGKPRLKRYESE SGGLAPFTIWTADEVGDTASAKKELLRDFPGGPVFDTPKPEKLLERIIKIGSDPGDTV LDYYLGSGTTAVVAQRLGRNWIGVEQNESVVEEYVIPRLRRGSVVLREVLWRVTNVW" misc_feature 3185622..3185642 /locus_tag="CMS_3033" /old_locus_tag="CMS3033" /note="PS00092 N-6 Adenine-specific DNA methylases signature." misc_feature 3185727..3186515 /locus_tag="CMS_3033" /old_locus_tag="CMS3033" /inference="protein motif:HMMPfam:PF01555" /note="HMMPfam hit to PF01555, DNA methylase N-4/N-6,score 1.6e-27" gene complement(3186609..3187364) /locus_tag="CMS_3034" /old_locus_tag="CMS3034" /db_xref="GeneID:6158533" CDS complement(3186609..3187364) /locus_tag="CMS_3034" /old_locus_tag="CMS3034" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="YP_001711659.1" /db_xref="GI:170783325" /db_xref="GeneID:6158533" /translation="MDRVACGDAQPWRWAPSPAWGAAARPSAVRLHNTRGCVCVLEAM ALLVLNRRVGAVVQGPGRWNVYDPRIICCRLNGPGRSDHFRSLTQLPRAAEPVSASLA ARHASAAQRTRIAELAVDLRHLDFLAVDIECHHLILEASGNDMFCALREAITEIHTGR THQRRMPRMPRRHALKTHEQAADAARNGESAGAEMMSLLARSAEHSNKELFPMAALSH APSWGLQANNGAVKPITHAAVRKPPILATKAEN" misc_feature complement(3186762..3187109) /locus_tag="CMS_3034" /old_locus_tag="CMS3034" /inference="protein motif:HMMPfam:PF07729" /note="HMMPfam hit to PF07729, FCD domain, score 0.00011" gene 3187392..3188792 /gene="gntP" /locus_tag="CMS_3035" /old_locus_tag="CMS3035" /db_xref="GeneID:6158534" CDS 3187392..3188792 /gene="gntP" /locus_tag="CMS_3035" /old_locus_tag="CMS3035" /codon_start=1 /transl_table=11 /product="gluconate permease" /protein_id="YP_001711660.1" /db_xref="GI:170783326" /db_xref="GeneID:6158534" /translation="MTIEDWTQTLTAGPLLLIAAGAIAVLLILIITLRIHAFVALILV SLATAFATGIPTSQIVTVLVGSFGSTLGTVALLVGLGAMLGRLVETSGGAKTLADTLI RIFGEKRAPFALGVASLIFGFPIFFDAGLVVMLPIVFSVARRLGGGVLRYGLPAAGAF SVMHIFVPPHPGPVAASEFFGANVGFVIIVGLVAAIPTWFVTSYLYGLWAGKKFVLPV PSLLGEADAHAESNPPKFGTVVAVLLLPLLLIFMNTGLNAASTGGILPEGTSDQAWFQ ILRTIGETPVALLIALLFAAFVLGRRRGIDKTALEKTLESALGPVCSVILITGAGGMF GGVLRTSGIGDALADVLGDLGIPIILAGFLIAAILRIAQGSATVALTTAAGLISPAIL AGDYNAFQVAALVVAVAGGSVVASHVNDSGFWLVGRFFEMDVKTTLKTWTVMETTIGV MGFGIAAAVFGVASVV" sig_peptide 3187392..3187544 /gene="gntP" /locus_tag="CMS_3035" /old_locus_tag="CMS3035" /note="Signal peptide predicted for CMS3035 by SignalP 2.0 HMM (Signal peptide probability 0.601) with cleavage site probability 0.391 between residues 51 and 52" misc_feature order(3187416..3187484,3187494..3187562,3187575..3187643, 3187746..3187814,3187833..3187892,3187950..3188018, 3188097..3188165,3188223..3188291,3188328..3188396, 3188439..3188507,3188601..3188669,3188712..3188780) /gene="gntP" /locus_tag="CMS_3035" /old_locus_tag="CMS3035" /note="12 probable transmembrane helices predicted for CMS3035 by TMHMM2.0 at aa 9-31, 35-57, 62-84, 119-141,148-167, 187-209, 236-258, 278-300, 313-335, 350-372,404-426 and 441-463" misc_feature 3187428..3188789 /gene="gntP" /locus_tag="CMS_3035" /old_locus_tag="CMS3035" /inference="protein motif:HMMPfam:PF02447" /note="HMMPfam hit to PF02447, Gluconate transporter,score 8.7e-144" gene 3188890..3189852 /locus_tag="CMS_3036" /old_locus_tag="CMS3036" /db_xref="GeneID:6158733" CDS 3188890..3189852 /locus_tag="CMS_3036" /old_locus_tag="CMS3036" /note="N/I/C associated with genes for sugar transport which could be another remnant of the Cmm patho island" /codon_start=1 /transl_table=11 /product="putative insertion element IS1121 transposase" /protein_id="YP_001711661.1" /db_xref="GI:170783327" /db_xref="GeneID:6158733" /translation="MSHGNARLTVHGRVLLVRRVVEDRRPVAHVARELGVSRQCAHRW VNRFRAEGLRGLTDRSSRPRSVPRRTSPERERAVLEARAQLRAGPARLAPVTGVPSRT ISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGH GITRIERVITDNAFAYRHSTAFKNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEW AYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS" misc_feature 3189298..3189840 /locus_tag="CMS_3036" /old_locus_tag="CMS3036" /inference="protein motif:HMMPfam:PF00665" /note="HMMPfam hit to PF00665, Integrase, catalytic region, score 3.5E-36" gene complement(3189896..3190924) /locus_tag="CMS_3037" /old_locus_tag="CMS3037" /db_xref="GeneID:6158535" CDS complement(3189896..3190924) /locus_tag="CMS_3037" /old_locus_tag="CMS3037" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="YP_001711662.1" /db_xref="GI:170783328" /db_xref="GeneID:6158535" /translation="MRGTVAADAEQHPPTLEMVGALAGVSRATVSRVVNGSDRVAPDV VAAVNAAIATLNYVPNRAARSLAGRRTNALALVMPEQTARVFADPFFSALIQGAMAHL AATEYTLTLLISSPAQAEKTRRFLLGGNVDGVLVVSHHSGDATFSGMRDRLPVVFAGR PLRQDDREAPTVDVDNVGAAKAATEHLISRGRTRIASVAGRQDMPAGIDRLRGFREAM TGAGLDPTLVAYGDFSPASGADAMRTLLARGEPIDGVFAASDQMAAGVYAELREHGLR VPDDVAVVGFDDDYFAKSAVPPLTTVRQPNQEFGRKMAEVLVRLVAGETVEPLTLMPT TLVVRQSS" misc_feature complement(3189905..3190714) /locus_tag="CMS_3037" /old_locus_tag="CMS3037" /inference="protein motif:HMMPfam:PF00532" /note="HMMPfam hit to PF00532, Periplasmic binding protein/LacI transcriptional regulator, score 6.6e-21" gene complement(3190981..3191904) /locus_tag="CMS_3038" /old_locus_tag="CMS3038" /db_xref="GeneID:6158536" CDS complement(3190981..3191904) /locus_tag="CMS_3038" /old_locus_tag="CMS3038" /codon_start=1 /transl_table=11 /product="putative sugar transport integral membrane protein" /protein_id="YP_001711663.1" /db_xref="GI:170783329" /db_xref="GeneID:6158536" /translation="MTATVTRPAASAGTASGRPPAGRDRAPRRRPSGGTGIDRRPGFL AYGLILAVFIGGAYPLWWSVVMGSSDKSALTDTWPSLLPGGRFWINVSEVVGTVPFWL ALMNSVIVSTVISVSVITFSTLAGYAFAKLRFRGREGLMVFVIATLAVPTQLGIIPLF MMMKQLGWTGTLGAVVVPTLVTAFGVFFMRQYLVDVIPTELIEAARMDGASMISTFWH VGVPAARPAMAILGLFTFMTAWTDYLWPLLVVPQNPTLQVALSQLQSARYVDYSIVLA GAVLATLPLLVLFVVAGRQLISGIMAGAVKG" misc_feature complement(3190999..3191595) /locus_tag="CMS_3038" /old_locus_tag="CMS3038" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 3.1e-19" misc_feature complement(order(3191026..3191094,3191191..3191259, 3191341..3191409,3191422..3191490,3191515..3191583, 3191710..3191778)) /locus_tag="CMS_3038" /old_locus_tag="CMS3038" /note="6 probable transmembrane helices predicted for CMS3038 by TMHMM2.0 at aa 43-65, 108-130, 139-161,166-188, 216-238 and 271-293" misc_feature complement(3191239..3191325) /locus_tag="CMS_3038" /old_locus_tag="CMS3038" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(3191901..3193007) /locus_tag="CMS_3039" /old_locus_tag="CMS3039" /db_xref="GeneID:6158537" CDS complement(3191901..3193007) /locus_tag="CMS_3039" /old_locus_tag="CMS3039" /codon_start=1 /transl_table=11 /product="putative sugar transport integral membrane protein" /protein_id="YP_001711664.1" /db_xref="GI:170783330" /db_xref="GeneID:6158537" /translation="MTTTLRPPAPPRPRALPPREPAPPTWRQRLATWDFRYSPYLYVA PFFVLFGLVGLFPLAYTFVVSLNDWNLLTGAGDWIGFENYAVELADPLFWNSVYNTFS IFLLSTVPQLAVAAAIAAILDQNLRAKTFWRMSVILPYIVTPVAVAIIFSSMFGERYG LVNNLLTEIGLDPVMWKTETLPSHLAIATMVNWRWTGYNALILLAAMQAVPRDVHESA ALDGAGSVRRFFSITVPSIRPTLVFVIITATIGGLQIFTEPKLFNAASSTPGGPQRQY QTTVLYLWDLAFNRQDFGKASAVAWILFLLIVLIGLLNFWLSRRIAGVEARGSARRTR RAITRFRAQPAAPAPGATSVPQAPDTVLPEERES" misc_feature complement(3192039..3192731) /locus_tag="CMS_3039" /old_locus_tag="CMS3039" /inference="protein motif:HMMPfam:PF00528" /note="HMMPfam hit to PF00528, Binding-protein-dependent transport systems inner membrane component, score 7.4e-10" misc_feature complement(order(3192057..3192116,3192240..3192308, 3192387..3192455,3192540..3192608,3192642..3192710, 3192819..3192887)) /locus_tag="CMS_3039" /old_locus_tag="CMS3039" /note="6 probable transmembrane helices predicted for CMS3039 by TMHMM2.0 at aa 41-63, 100-122, 134-156,185-207, 234-256 and 298-317" misc_feature complement(3192303..3192389) /locus_tag="CMS_3039" /old_locus_tag="CMS3039" /note="PS00402 Binding-protein-dependent transport systems inner membrane comp. sign." gene complement(3193095..3194414) /locus_tag="CMS_3040" /old_locus_tag="CMS3040" /db_xref="GeneID:6158538" CDS complement(3193095..3194414) /locus_tag="CMS_3040" /old_locus_tag="CMS3040" /codon_start=1 /transl_table=11 /product="putative sugar-binding transport lipoprotein" /protein_id="YP_001711665.1" /db_xref="GI:170783331" /db_xref="GeneID:6158538" /translation="MTNTARTRAAAGIAGAAVIALLATGCSSGGAGGSDGGDITLTVT TFNKMGFDELYAQYEASHPGVTIKATNIDTGGNALIDWQTKQASGAGLPDVQAVEEGG LSKVMQVSDSFTDLRDHGIEDVKDRWVPWKYDQATDPEGRVIGYGTDIGPEGLCYNSK LFAEAGLPTDRAEVATLFGGEDATWDRYFEVGKQYKAATGKSWYDQSGFIWNAMVNQQ AEGYYTKDGELNVEGNADLEALWQKVADGAGAGLSDAQTAWDWGGGKAFTDGSFATFV CPGWMLGTLKGNAESAGGDATTGWDFADVFPGGSANWGGSFLTVPTSSKHPAEAAELA AWLTEPEQQSAAFQSAGTFPSAVEAQSSEGVTGPSELTTFFNEAPVGTILAARAEGVK AQYKGPDDSVIQEQVFGPSIQALDAGKSDGKKSWADAITLLGQLVEQ" misc_feature complement(3193383..3194246) /locus_tag="CMS_3040" /old_locus_tag="CMS3040" /inference="protein motif:HMMPfam:PF01547" /note="HMMPfam hit to PF01547, Bacterial extracellular solute-binding protein, family 1, score 0.0013" gene 3194576..3195592 /locus_tag="CMS_3041" /old_locus_tag="CMS3041" /db_xref="GeneID:6158539" CDS 3194576..3195592 /locus_tag="CMS_3041" /old_locus_tag="CMS3041" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_001711666.1" /db_xref="GI:170783332" /db_xref="GeneID:6158539" /translation="MSTTMPPAPARPPDGDDAGPVRFDVIGAAGIATSVVPDMLLVPG IEVVAVHSRTRASAEDLAATHGIARIHDTLDALLADPEVDAVYVATPHTLHRAQAEAA LRAGKHVVCEKPATTTAADTRALVDLARAEGLLFLEALWMAFSPGYLAVRHAIADGRI GDPRAISVAFGFVTEPGKGRLWDPEVGGGTLLDMGVYPLAFAHGLFGTPSSVAAVGTV IDGGVDTEVAILLGWPDGRHATLACSLVAALPTGATVSGTAGRIEVDPLFLASRALTV VPADGDPERQEHEIEGRGYVPMFRAARDAIRAGAVECAEMPHAESVALAELMDGILAD IGAR" misc_feature 3194636..3194995 /locus_tag="CMS_3041" /old_locus_tag="CMS3041" /inference="protein motif:HMMPfam:PF01408" /note="HMMPfam hit to PF01408, Oxidoreductase, N-terminal,score 1.5e-37" misc_feature 3195029..3195343 /locus_tag="CMS_3041" /old_locus_tag="CMS3041" /inference="protein motif:HMMPfam:PF02894" /note="HMMPfam hit to PF02894, Oxidoreductase, C-terminal,score 6e-13" gene 3195729..3196280 /locus_tag="CMS_3042" /old_locus_tag="CMS3042" /db_xref="GeneID:6158540" CDS 3195729..3196280 /locus_tag="CMS_3042" /old_locus_tag="CMS3042" /codon_start=1 /transl_table=11 /product="putative exported oxidoreductase" /protein_id="YP_001711667.1" /db_xref="GI:170783333" /db_xref="GeneID:6158540" /translation="MTHVLVLVGSLRSGSTNQQIAEAAVRHAPAGVTLDIHAGLDRLP FYNEDVDVEGSVPADAVAFRDAIAAADALLVITPEYNGTMPAVLKNAIDWASRPFGAS ALAGKPTAVIGSAFGQYGGVWAQDEARKALGIAGAHVLEDVKMAIPESVVRFAERHPA DDAEVVAQLREVLDAVRSSATAA" sig_peptide 3195729..3195797 /locus_tag="CMS_3042" /old_locus_tag="CMS3042" /note="Signal peptide predicted for CMS3042 by SignalP 2.0 HMM (Signal peptide probability 0.696) with cleavage site probability 0.683 between residues 23 and 24" misc_feature 3195732..3196262 /locus_tag="CMS_3042" /old_locus_tag="CMS3042" /inference="protein motif:HMMPfam:PF03358" /note="HMMPfam hit to PF03358, NADPH-dependent FMN reductase, score 7.4e-49" gene complement(3196370..3197545) /gene="fdh" /locus_tag="CMS_3044" /old_locus_tag="CMS3044" /pseudo /db_xref="GeneID:6158541" misc_feature complement(3196610..3197485) /gene="fdh" /locus_tag="CMS_3044" /old_locus_tag="CMS3044" /inference="protein motif:HMMPfam:PF00107" /note="HMMPfam hit to PF00107, Zinc-containing alcohol dehydrogenase superfamily, score 5.9e-29" /pseudo misc_feature complement(3196670..3196699) /gene="fdh" /locus_tag="CMS_3044" /old_locus_tag="CMS3044" /note="PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2." /pseudo misc_feature complement(3197327..3197371) /gene="fdh" /locus_tag="CMS_3044" /old_locus_tag="CMS3044" /note="PS00059 Zinc-containing alcohol dehydrogenases signature." /pseudo gene complement(3197937..3198263) /locus_tag="CMS_3046" /old_locus_tag="CMS3046" /db_xref="GeneID:6158687" CDS complement(3197937..3198263) /locus_tag="CMS_3046" /old_locus_tag="CMS3046" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711668.1" /db_xref="GI:170783334" /db_xref="GeneID:6158687" /translation="MHDTGTDDMGDLVQSSESEALPDRREGPDRSPTEQARFVAGYFG WSITGDAIRGADEAVALYIEDLAAALTELGWISTAGIHWDRVPYGEHDAAEALRAVQR AHGWDI" gene complement(3198402..3198725) /locus_tag="CMS_3047" /old_locus_tag="CMS3047" /db_xref="GeneID:6158542" CDS complement(3198402..3198725) /locus_tag="CMS_3047" /old_locus_tag="CMS3047" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711669.1" /db_xref="GI:170783335" /db_xref="GeneID:6158542" /translation="MGTFKYDSTLTAEFDDRLLAHLQLVIGAKLRRGENFYFSWRDDV EVGDGRTTIWMHNSLPLVFKYHGSRVPPINRKWVDALMTTANSPGGLLIMREPPEDEP RDDAR" gene 3199055..3199939 /locus_tag="CMS_3048" /old_locus_tag="CMS3048" /db_xref="GeneID:6158543" CDS 3199055..3199939 /locus_tag="CMS_3048" /old_locus_tag="CMS3048" /EC_number="1.11.1.6" /codon_start=1 /transl_table=11 /product="manganese catalase" /protein_id="YP_001711670.1" /db_xref="GI:170783336" /db_xref="GeneID:6158543" /translation="MFFHKQALQHEATPDKPDPIYARHLQEVLGGQYGEISVAMQYGF QSWNSKLPGKYRDMLYGIGAEEFGHVEMLAIMIAKLLETAPVEATEDAMKDPTLAAVI GGGDIQHAIVAGAGARPVDANGNPWSGAFVTASGNLLADFHANANAEMQGRIQVARLY HMTDDKGVKDLLSFLLARDTMHQNQWLAAIAELQAEGTETLPVPGDFPVALEEQEVSY QYLNFSDGPAASEGTWASGPTPDGKGTFTYHDGPTTSVPMPAPPIGNPLLHGTIPAKD PGLLKKAASAVKDAVTPE" misc_feature 3199055..3199909 /locus_tag="CMS_3048" /old_locus_tag="CMS3048" /inference="protein motif:HMMPfam:PF05067" /note="HMMPfam hit to PF05067, Manganese containing catalase, score 6.8e-118" gene 3200045..3200824 /locus_tag="CMS_3049" /old_locus_tag="CMS3049" /db_xref="GeneID:6158544" CDS 3200045..3200824 /locus_tag="CMS_3049" /old_locus_tag="CMS3049" /codon_start=1 /transl_table=11 /product="putative beta-lactamase" /protein_id="YP_001711671.1" /db_xref="GI:170783337" /db_xref="GeneID:6158544" /translation="MIRTGTPPRPSCPVLTRDVAPGVHLLAHAYVNLYLIEGDDGITV VDTAFPDTWPHLLRALHAIGRTPDDVRAIVLTHGHFDHVGSAARAARELGVPVHVHPD DARIARHPYSYRRERTPFAYPLRHGRAIPVVAAMAAAGALRVEGVDAVADVAAGPLDV PGRPVAIPTPGHTDGHVALHLPDRDALITGDALVTLDPYTGRTGCRIVAGAATADSGR ALRSLLALEETDARIVLPGHGAPWTNGIRAAVAAARAVGPS" misc_feature 3200132..3200758 /locus_tag="CMS_3049" /old_locus_tag="CMS3049" /inference="protein motif:HMMPfam:PF00753" /note="HMMPfam hit to PF00753, Beta-lactamase-like, score 4.6e-29" gene 3200821..3201558 /locus_tag="CMS_3050" /old_locus_tag="CMS3050" /db_xref="GeneID:6158545" CDS 3200821..3201558 /locus_tag="CMS_3050" /old_locus_tag="CMS3050" /codon_start=1 /transl_table=11 /product="putative phosphoglycerate mutase" /protein_id="YP_001711672.1" /db_xref="GI:170783338" /db_xref="GeneID:6158545" /translation="MTALTELWLVRHGESTANVAASRADRDGDEVIRVDHRDPDVPLS DVGKAQARALGRWLATRSDAPTTVWTSPYLRARSTVAVALGEARIDAEARPDERLRDR ELGILDLLTARGVAARHPDEDDRRRWLGKLSYRPPGGESWADVALRIRSFLQDPEVAS ADGRALITTHDAVVMLFLYVGLGLTEAELLAFQAQHTVANASVTILERSAPRGPWTLR VFSATEHLDGQGAPVTEHGGEPDDRRR" misc_feature 3200833..3201474 /locus_tag="CMS_3050" /old_locus_tag="CMS3050" /inference="protein motif:HMMPfam:PF00300" /note="HMMPfam hit to PF00300,Phosphoglycerate/bisphosphoglycerate mutase, score 8.5e-13" misc_feature 3200845..3200874 /locus_tag="CMS_3050" /old_locus_tag="CMS3050" /note="PS00175 Phosphoglycerate mutase family phosphohistidine signature." gene 3201542..3202435 /locus_tag="CMS_3051" /old_locus_tag="CMS3051" /db_xref="GeneID:6158546" CDS 3201542..3202435 /locus_tag="CMS_3051" /old_locus_tag="CMS3051" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711673.1" /db_xref="GI:170783339" /db_xref="GeneID:6158546" /translation="MTDGDDARPDGSAQVVTPAALRDWALPAATGSKYGRGQVVVVGG ALRSPGAAMIAGLAALRVGAGRLTLAVGASVATEVAVAVPESGVVPLEETADGHVRGA GIRAAEDDIASADAVLLGPGLDDADGAERMVRLLATLVPDDAVVVLDAFALGVLPACR ESAAHFAGRLVLTPNSSEAERLLGREAGDDAVADAREIAREYRAVVTMGGVVAAPDGR AWTIGAGGSGLGTSGSGDVLGGAVAGLCARGADPAQAAVWATHAHAAAGDRLAVQVGP LGYLAGELLVELPRVLVELQA" misc_feature 3201656..3202411 /locus_tag="CMS_3051" /old_locus_tag="CMS3051" /inference="protein motif:HMMPfam:PF01256" /note="HMMPfam hit to PF01256, Protein of unknown function UPF0031, score 1.9e-30" gene 3202528..3202731 /locus_tag="CMS_3052" /old_locus_tag="CMS3052" /db_xref="GeneID:6158547" CDS 3202528..3202731 /locus_tag="CMS_3052" /old_locus_tag="CMS3052" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711674.1" /db_xref="GI:170783340" /db_xref="GeneID:6158547" /translation="MTDSTYTAQLVGPEGTEETEVELINGEPVKSFVRATSLSEEEQV WELDPDADGYVYRPAGIPGADYS" gene complement(3202753..3202968) /locus_tag="CMS_3053" /old_locus_tag="CMS3053" /db_xref="GeneID:6158548" CDS complement(3202753..3202968) /locus_tag="CMS_3053" /old_locus_tag="CMS3053" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711675.1" /db_xref="GI:170783341" /db_xref="GeneID:6158548" /translation="MDMDPTLALLLVALAAILTSGVLLCVGGLLSARERGMGRAQLFA RPALPWTLAAIGAGAVSVLCCLPILLP" sig_peptide complement(3202753..3202848) /locus_tag="CMS_3053" /old_locus_tag="CMS3053" /note="Signal peptide predicted for CMS3053 by SignalP 2.0 HMM (Signal peptide probability 0.945) with cleavage site probability 0.655 between residues 32 and 33" misc_feature complement(order(3202759..3202827,3202873..3202941)) /locus_tag="CMS_3053" /old_locus_tag="CMS3053" /note="2 probable transmembrane helices predicted for CMS3053 by TMHMM2.0 at aa 10-32 and 48-70" gene 3203069..3203791 /gene="deoC" /locus_tag="CMS_3054" /old_locus_tag="CMS3054" /db_xref="GeneID:6158549" CDS 3203069..3203791 /gene="deoC" /locus_tag="CMS_3054" /old_locus_tag="CMS3054" /EC_number="4.1.2.4" /note="catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate" /codon_start=1 /transl_table=11 /product="deoxyribose-phosphate aldolase" /protein_id="YP_001711676.1" /db_xref="GI:170783342" /db_xref="GeneID:6158549" /translation="MSTSPSTPATDTAAIARIIDHTLLKPEATRDEVAALVAEAVELG TYSVCVSPSMLPLELPAGSDLKVAVVCGFPSGKHHSEVKAAEAALSIRQGADEIDMVI DVGAAREGRFADVEADIRAVREAVPTPAVLKVIIESAALDDDQIVAVCTAAVAAGADF VKTSTGFHPTGGATVHAVELMSRTVDGKAGVKASGGIRTYETAVQMIEAGATRLGVSG SAVVLAGPVQTPENGALGSSGY" misc_feature 3203105..3203740 /gene="deoC" /locus_tag="CMS_3054" /old_locus_tag="CMS3054" /inference="protein motif:HMMPfam:PF01791" /note="HMMPfam hit to PF01791, Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase,score 7e-81" gene 3203791..3205086 /locus_tag="CMS_3055" /old_locus_tag="CMS3055" /db_xref="GeneID:6158662" CDS 3203791..3205086 /locus_tag="CMS_3055" /old_locus_tag="CMS3055" /note="catalyzes the removal of amino acids from the N termini of peptides" /codon_start=1 /transl_table=11 /product="putative aminopeptidase 2" /protein_id="YP_001711677.1" /db_xref="GI:170783343" /db_xref="GeneID:6158662" /translation="MPTDRRAHLADIGRFIQASPSSFHAAEEGARRLETAGFTRLDER DAWPTGSGKRFIVRDGALLAWIQPAGAHATTPFRVLGAHTDSPGFKLKPKPTIGSDGW LQAGVEVYGGPLLNSWLDRDLELAGRLVTRDGRRHLVRTGPLLRFPQLAVHLDRGVNT DGLRLDPQRHTSPILGTGSPADADVLGHLAGLAGVAADDVLGYDVGVADTQAPGSLGL AGELFAAGRMDNLSSVHAGLAALLELAGTADDDPDAPVAVLAAFDHEEVGSATPSGAA GPVLEDVLGRISAGLGASSEERRRAFAFSWCLSADAGHAVHPNYPDRHDPANRPVPNG GPLLKINANQRYATDGVGAREWALACERAGVPFQEFVSSNAVPCGSTIGPITATRLGI RTVDVGIPLLSMHSARELCGADDPGHLAAAAAAFLRPAA" misc_feature 3203833..3205071 /locus_tag="CMS_3055" /old_locus_tag="CMS3055" /inference="protein motif:HMMPfam:PF02127" /note="HMMPfam hit to PF02127, Peptidase M18,aminopeptidase I, score 1.9e-131" gene complement(3205195..3205908) /locus_tag="CMS_3056" /old_locus_tag="CMS3056" /db_xref="GeneID:6158550" CDS complement(3205195..3205908) /locus_tag="CMS_3056" /old_locus_tag="CMS3056" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_001711678.1" /db_xref="GI:170783344" /db_xref="GeneID:6158550" /translation="MGYRNRLAAATTAIVIAAALAGCSTPPRTPDADASPSADAAAPS ETESQGWNRADLSFAEEMGDHAAGSVELAVAALQVRDLPPGAGELAAQIRDEQGPQSR TLAELAEEWSGEEGGSGANGTEDRDEAGGVSASSGSEDGSAGGTTDGAASEADIEAMS DTAFDSELQVLRASSGTDAGRLFLQGMIARHQAAIELAHGESQLGTSTEALELAGAMA ASQGEQLTKMRALLASYGG" sig_peptide complement(3205195..3205296) /locus_tag="CMS_3056" /old_locus_tag="CMS3056" /note="Signal peptide predicted for CMS3056 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.571 between residues 34 and 35" misc_feature complement(3205840..3205872) /locus_tag="CMS_3056" /old_locus_tag="CMS3056" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 3205964..3206617 /locus_tag="CMS_3057" /old_locus_tag="CMS3057" /db_xref="GeneID:6158551" CDS 3205964..3206617 /locus_tag="CMS_3057" /old_locus_tag="CMS3057" /codon_start=1 /transl_table=11 /product="putative carboxymethylenebutenolidase" /protein_id="YP_001711679.1" /db_xref="GI:170783345" /db_xref="GeneID:6158551" /translation="MPEIVDLPHPGVTLEFGDPGSPVVVLVHDDHGRLPWLDQYALAL ARAGFHVLVPDLYDGRATLDDALAEGLAAQLDVGFALGTIRDGIDSARARGSRRVGLV GFAPGGWLALLEAQDGGADAVVAYCASLGPQEHGVIPCAVLLHLAEHDDWIDDQRPEA FIGRLREHGTPITSHTYPGTTPVFPNASLRDRMDPDAAALAYRRTEAFLREHLANGS" misc_feature 3205988..3206602 /locus_tag="CMS_3057" /old_locus_tag="CMS3057" /inference="protein motif:HMMPfam:PF01738" /note="HMMPfam hit to PF01738, Dienelactone hydrolase,score 7.9e-09" gene 3206715..3207134 /locus_tag="CMS_3058" /old_locus_tag="CMS3058" /db_xref="GeneID:6158552" CDS 3206715..3207134 /locus_tag="CMS_3058" /old_locus_tag="CMS3058" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711680.1" /db_xref="GI:170783346" /db_xref="GeneID:6158552" /translation="MSSSPNRLLGTAFGAVYVLVGLLGFLFPPQSGGFFSSDGGLLLG IFMVNPFHNVAHLLIGAALLIGGLSSVASAKAVNSTIGFAYLALGIVGFFLVNTDFNI LALNTADHFLHLGSAVVLLIVGLGAEKGVRNRAARAA" sig_peptide 3206715..3206822 /locus_tag="CMS_3058" /old_locus_tag="CMS3058" /note="Signal peptide predicted for CMS3058 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.823 between residues 36 and 37" misc_feature order(3206751..3206819,3206862..3206930,3206949..3207002, 3207045..3207098) /locus_tag="CMS_3058" /old_locus_tag="CMS3058" /note="4 probable transmembrane helices predicted for CMS3058 by TMHMM2.0 at aa 13-35, 50-72, 79-96 and 111-128" gene 3207258..3207959 /locus_tag="CMS_3059" /old_locus_tag="CMS3059" /db_xref="GeneID:6158553" CDS 3207258..3207959 /locus_tag="CMS_3059" /old_locus_tag="CMS3059" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711681.1" /db_xref="GI:170783347" /db_xref="GeneID:6158553" /translation="MSLLIRHWLALAALGAALIHLAVGAGSPPAAMVALLLIGLAEGA WAVAALRSDRLPVPGWAALGALVPVAGWALLVTAAVVMSAPGITSDLPVIPMLAATLL DLVVAAVVGRHLRSHAESEALAVCTAVEATFPADAALVGSGAPLPSPAAPAAPVSAAL PASAAGTPSTATAEADPERTGGRYLAGVLVGAFVVAGLVTPALSLTRAGEFAVPHGQH SSIDLDGIQGEHSGH" sig_peptide 3207258..3207332 /locus_tag="CMS_3059" /old_locus_tag="CMS3059" /note="Signal peptide predicted for CMS3059 by SignalP 2.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.675 between residues 25 and 26" misc_feature order(3207276..3207335,3207345..3207413,3207432..3207500, 3207528..3207587,3207807..3207875) /locus_tag="CMS_3059" /old_locus_tag="CMS3059" /note="5 probable transmembrane helices predicted for CMS3059 by TMHMM2.0 at aa 7-26, 30-52, 59-81, 91-110 and 184-206" gene complement(3207994..3209295) /locus_tag="CMS_3060" /old_locus_tag="CMS3060" /db_xref="GeneID:6158554" CDS complement(3207994..3209295) /locus_tag="CMS_3060" /old_locus_tag="CMS3060" /codon_start=1 /transl_table=11 /product="putative helicase" /protein_id="YP_001711682.1" /db_xref="GI:170783348" /db_xref="GeneID:6158554" /translation="MSTVPLSPEQAAVFQAIEGTRDHIFVTGRAGTGKSTLLTHLSWN TEKQIVICAPTGVAALNVGGQTIHSLFKLPIGVIADEEIEQTGELRKLLNTIDTLVID EVSMVNADLVDAIDRSLRQARHKKDVPFGGVQVVLFGDPYQLAPVPGDGDERAYFADR YRSMWFFDAKVWEEAQLRIYELTEIHRQHEEAFKEMLNAVRHGRVTAEIAGVLNAAGA RPAPTDGAITLATRNDTVNRINAEALKRLPGRSLTATADVTGDFGGRTYPADEKLDLK IGAQVMFLRNDVDQRWVNGSVGVVTRIDTNVYVELDGVVHEVEPVTWEKHKYSYSPTT KQLRRDVVADFTQFPLRLAWAVTIHKSQGKTYDRAIVDLGARVFSPGQTYVALSRITD IDGLFLTRPLRPGDIIVDENVRRFMSEATRIRVTPSVAPAS" misc_feature complement(3209191..3209214) /locus_tag="CMS_3060" /old_locus_tag="CMS3060" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene 3209429..3210448 /locus_tag="CMS_3061" /old_locus_tag="CMS3061" /db_xref="GeneID:6158555" CDS 3209429..3210448 /locus_tag="CMS_3061" /old_locus_tag="CMS3061" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711683.1" /db_xref="GI:170783349" /db_xref="GeneID:6158555" /translation="MPSPAVDARGELRRAVLVWSLLAALLVGAFLGTVASLNQGTFSA HGFVRSYLDALAREDSRDALSAPGVVLPDTGSRALLDARALPGLADVELVSDEPAGDG ERAVTYSYTLPSGPGSTEFLVRETPAALGLFARWEFATSPVAAIDLELRHAATFTANG LAVSATPGGEAAEGAGSTYLVLAPASLALDHASEYLQAEDAEVAVTEPGSVVPARVDA EPTDDLVASVQSEVESYLTQCTTQAVLYPSGCPFGKTIRDRITAPPVWSMTAMPEITL QPASDDPADLDWVVPSTVGTAHIKVPVRSLYDGSVKDLDEDVPFSVSWRVSVDETSGV RIQGL" sig_peptide 3209429..3209539 /locus_tag="CMS_3061" /old_locus_tag="CMS3061" /note="Signal peptide predicted for CMS3061 by SignalP 2.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.397 between residues 37 and 38" misc_feature 3209471..3209539 /locus_tag="CMS_3061" /old_locus_tag="CMS3061" /note="1 probable transmembrane helix predicted for CMS3061 by TMHMM2.0 at aa 15-37" gene 3210564..3210986 /locus_tag="CMS_3062" /old_locus_tag="CMS3062" /db_xref="GeneID:6158556" CDS 3210564..3210986 /locus_tag="CMS_3062" /old_locus_tag="CMS3062" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711684.1" /db_xref="GI:170783350" /db_xref="GeneID:6158556" /translation="MSATMNPYLSFRDQAADALLFYQGIFGGEVETTTFGDGGMATDP AEADKVMHGQLTSGAGFVLMASDTPAAMGVPSGSAITLSLSGDDADVLGGWWDALTAD GTIVLPLEPAPWGDRFGMCTDRFGIDWMVSISAPPAAA" misc_feature 3210573..3210956 /locus_tag="CMS_3062" /old_locus_tag="CMS3062" /inference="protein motif:HMMPfam:PF00903" /note="HMMPfam hit to PF00903, Glyoxalase/bleomycin resistance protein/dioxygenase, score 7.3e-11" misc_feature 3210615..3210662 /locus_tag="CMS_3062" /old_locus_tag="CMS3062" /note="PS00225 Crystallins beta and gamma 'Greek key' motif signature." misc_feature 3210819..3210857 /locus_tag="CMS_3062" /old_locus_tag="CMS3062" /note="PS00213 Lipocalin signature." gene complement(3211010..3211873) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /db_xref="GeneID:6158557" CDS complement(3211010..3211873) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /codon_start=1 /transl_table=11 /product="putative iron-siderophore uptake system ATP-binding component" /protein_id="YP_001711685.1" /db_xref="GI:170783351" /db_xref="GeneID:6158557" /translation="MGDPPVDDTETRAPAAAAPTASAATGAPRLRAEGVTLSYDRRVI SEQLDVSVPDRSFTVIVGPNACGKSTLLRALSRLLAPTAGGVLLDDRPLGSYRAKEVA RIVGLLPQSAIAPEGITVADLVARGRFPHQNLIRQWTSTDEDAVQEAMAATGVADLAD RHVDELSGGQRQRVWVAMALAQQTPVLLLDEPTTFLDIAHQIELLDLLADLHRDGSTI VAVLHDLNHAARYADHLIVMADGRVVASGAPRDIVTAELVEEVFGLPCLVIDDPVSHT PLIVPSGGRWA" misc_feature complement(3211151..3211711) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 5.5e-49" misc_feature complement(3211334..3211378) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /note="PS00211 ABC transporters family signature." misc_feature complement(3211667..3211690) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(3211682..3211873) /locus_tag="CMS_3063" /old_locus_tag="CMS3063" /note="PS00430 TonB-dependent receptor proteins signature 1." gene complement(3211893..3212957) /locus_tag="CMS_3064" /old_locus_tag="CMS3064" /db_xref="GeneID:6158558" CDS complement(3211893..3212957) /locus_tag="CMS_3064" /old_locus_tag="CMS3064" /codon_start=1 /transl_table=11 /product="putative iron-siderophore uptake system transmembrane component" /protein_id="YP_001711686.1" /db_xref="GI:170783352" /db_xref="GeneID:6158558" /translation="MSARARADAGRRPAARIPGTVRLPVVGIRLQRREVLVGAALAVA ILALALVALGTGDFPLTVPEVIRAMLLPDGSFASTIVLEWRLPRVLAAFGAALGVAGA VFQSLTRNPLGSPDVIGFSTGAYTGALIVTTLAGATFLPTAIGALAGGLGTALVVYLL AYRGGVQGFRLIITGIAVTAVLHGVNTFLLLKAGTEVAMAASIWGAGSLALVGWDRAL PAFVALLVLAPAILLLSAPLRQLELGDDAARAHGVRAEPTRLALLILGVALTAVVTAA SGPIAFVALAAPQIARRLTRSAGLPLVPAALTGGLLLLAADFAAQHALPGTVPVGIVT VVVGGAYLIALLIREASRRA" sig_peptide complement(3211893..3212054) /locus_tag="CMS_3064" /old_locus_tag="CMS3064" /note="Signal peptide predicted for CMS3064 by SignalP 2.0 HMM (Signal peptide probability 0.608) with cleavage site probability 0.471 between residues 54 and 55" misc_feature complement(3211914..3212792) /locus_tag="CMS_3064" /old_locus_tag="CMS3064" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 8.8e-84" misc_feature complement(order(3211917..3211985,3211998..3212066, 3212103..3212171,3212229..3212297,3212316..3212375, 3212385..3212453,3212472..3212531,3212541..3212609, 3212646..3212702,3212796..3212855)) /locus_tag="CMS_3064" /old_locus_tag="CMS3064" /note="10 probable transmembrane helices predicted for CMS3064 by TMHMM2.0 at aa 35-54, 86-104, 117-139, 143-162,169-191, 195-214, 221-243, 263-285, 298-320 and 325-347" gene complement(3212954..3214012) /locus_tag="CMS_3065" /old_locus_tag="CMS3065" /db_xref="GeneID:6158559" CDS complement(3212954..3214012) /locus_tag="CMS_3065" /old_locus_tag="CMS3065" /codon_start=1 /transl_table=11 /product="putative iron-siderophore uptake system transmembrane component" /protein_id="YP_001711687.1" /db_xref="GI:170783353" /db_xref="GeneID:6158559" /translation="MSLRVLARASAPDAPEGRARSGLTRSAGLLLALGVLVLACLASV AVGSRDIPLGAVVDALAGRPRDPAELVVILDLRVPRTLVGLAAGLALGVAGALIQAVT RNPLADPGILGVTAGSAFAVAIATGVLGVTAVSGYIWFAFAGALVAAVVVYVVGSAGR GGGDPVRLTLAGVALGAVLAGITSGMLLADPQGFSAMRAWESGSLQDRGWDALLPVAP FLAGGVMLAALIARSLDAVALGDDLARSLGANVVVVRAVAVVAVTLLAGGATAMAGPI AFVGLMIPHIARWIVGPDQRWILAYTIVLAPVLLLGADIVGRVVLRPAELPAGIVTAV LGAPVLILLVRRQRAAGL" sig_peptide complement(3212954..3213097) /locus_tag="CMS_3065" /old_locus_tag="CMS3065" /note="Signal peptide predicted for CMS3065 by SignalP 2.0 HMM (Signal peptide probability 0.984) with cleavage site probability 0.576 between residues 48 and 49" misc_feature complement(3212975..3213874) /locus_tag="CMS_3065" /old_locus_tag="CMS3065" /inference="protein motif:HMMPfam:PF01032" /note="HMMPfam hit to PF01032, Bacterial transport system permease protein, score 3.9e-97" misc_feature complement(order(3212981..3213037,3213065..3213124, 3213137..3213196,3213206..3213274,3213311..3213379, 3213449..3213517,3213536..3213604,3213614..3213682, 3213719..3213787,3213869..3213937)) /locus_tag="CMS_3065" /old_locus_tag="CMS3065" /note="10 probable transmembrane helices predicted for CMS3065 by TMHMM2.0 at aa 26-48, 76-98, 111-133, 137-159,166-188, 212-234, 247-269, 273-292, 297-316 and 326-344" gene 3214115..3215119 /locus_tag="CMS_3066" /old_locus_tag="CMS3066" /db_xref="GeneID:6158560" CDS 3214115..3215119 /locus_tag="CMS_3066" /old_locus_tag="CMS3066" /codon_start=1 /transl_table=11 /product="putative iron-siderophore binding lipoprotein" /protein_id="YP_001711688.1" /db_xref="GI:170783354" /db_xref="GeneID:6158560" /translation="MRFPTTGSALVALTVATLALTGCTASSDPGASAPPASGSATGAF PSTVDTKFGAVTVPSEPKRVVALGWGDAETALALGVQPVGASDWLGFGADADGVGPWA QGLYTQKPQIIETLEPSYEAIAALTPDLILDTKGSGDQDRYDRLSQIAPTIGVPEGAD SYLTDMDDQVDMIAEALGREDQGDALLDAVDTRFDAVAAAHPDWKGKTATAATKTSEG WGAYAEGSERVAFLERLGFEQSPTIAGIPVNAGGFSVDVSSEQLDLLDADVIVAFPIF IDKSVITDDPLWQAIPAVAAGHSIVLDGDVSSAYSIGTTLSTGYALDQLVPLLETATS" sig_peptide 3214115..3214243 /locus_tag="CMS_3066" /old_locus_tag="CMS3066" /note="Signal peptide predicted for CMS3066 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.275 between residues 43 and 44" misc_feature 3214151..3214183 /locus_tag="CMS_3066" /old_locus_tag="CMS3066" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." misc_feature 3214295..3215032 /locus_tag="CMS_3066" /old_locus_tag="CMS3066" /inference="protein motif:HMMPfam:PF01497" /note="HMMPfam hit to PF01497, Periplasmic binding protein, score 1.6e-31" gene 3215293..3215805 /locus_tag="CMS_3067" /old_locus_tag="CMS3067" /db_xref="GeneID:6158561" CDS 3215293..3215805 /locus_tag="CMS_3067" /old_locus_tag="CMS3067" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711689.1" /db_xref="GI:170783355" /db_xref="GeneID:6158561" /translation="MFQGRAIDSPLHAVMNAGFILQGVLYLLAAVIATRALRAGPRRT FLALAAVHAVGITVVGLVHGSASSAASGIGWMHVVGAGLAIIAGNAASIVAGLGSGRV GAARVFRIASVALGVVGLIAVALLEVLGGSDIDGIWERGSVYTVTAWELMTGIAVLVA ARRRRGSTRD" misc_feature order(3215320..3215388,3215422..3215481,3215524..3215592, 3215611..3215679,3215722..3215775) /locus_tag="CMS_3067" /old_locus_tag="CMS3067" /note="5 probable transmembrane helices predicted for tmhmm2embl_unknown_000010_3215225_3215737 by TMHMM2.0 at aa 10-32, 44-63, 78-100, 107-129 and 144-161" gene complement(3215834..3217690) /locus_tag="CMS_3068" /old_locus_tag="CMS3068" /db_xref="GeneID:6158562" CDS complement(3215834..3217690) /locus_tag="CMS_3068" /old_locus_tag="CMS3068" /codon_start=1 /transl_table=11 /product="putative integral membrane transport protein" /protein_id="YP_001711690.1" /db_xref="GI:170783356" /db_xref="GeneID:6158562" /translation="MVRYGLPAAKMMVNISAATAIGALLLAAFALSRQRPEYGRALDI AAAGAALWTVASAITAFFTFLSVSGTAFSFSAEFGTSLGLVLTQISVGQAWLATTLIA ATVTVLCFAVRNHTAIAFVLVIAVGGLVPMAQQGHAGGTEGHDAAVNALGLHLVFAAI WLGGLVTLALLRSKLDGDRLVPVLRRYSAVALVCFVVVAASGYVSAEIRVGSLDRLLT AYGLLVLIKVAALLALGLFGAAYRRVLIGRLEERGSAARGPFWWLVTAELAFMGVASG VAAALARTAPPVSQVVATQLPDPTPAQILTGEPLPPELTPMRYLTEWNFDLLWILLCA FGIFFYLAGVHRLRTRGDAWPLHRTILWVAGMIGLFYITNGGVNVYQKYLFSSHMLAH MVLAMVIPLLLVPGAPVTLAMRAIRKRQDGSRGGREWILMAMHSKFASFVGHPVVAAV LFAGSLLVFYYSPLFSWATTDHIGHQWMIVHFLIVGYLFTQNLIGVDPMPVRLAYPMR LLLLLATMAFHAFFGLSLMTGTGLLLADWFGAMGRPWGESALADQQAGGGIAWSIGEI PTVVLAIVTAIMWSKSDKRDSVRYDRKADRDGDAELEAYNRNLEALQAAERR" sig_peptide complement(3215834..3215971) /locus_tag="CMS_3068" /old_locus_tag="CMS3068" /note="Signal peptide predicted for CMS3068 by SignalP 2.0 HMM (Signal peptide probability 0.975) with cleavage site probability 0.315 between residues 46 and 47" misc_feature complement(order(3215951..3216019,3216098..3216166, 3216203..3216262,3216305..3216373,3216458..3216526, 3216554..3216613,3216650..3216718,3216848..3216916, 3216977..3217045,3217073..3217141,3217175..3217243, 3217286..3217339,3217358..3217426,3217469..3217537, 3217595..3217648)) /locus_tag="CMS_3068" /old_locus_tag="CMS3068" /note="15 probable transmembrane helices predicted for CMS3068 by TMHMM2.0 at aa 15-32, 52-74, 89-111, 118-135,150-172, 184-206, 216-238, 259-281, 325-347, 360-379,389-411, 440-462, 477-496, 509-531 and 558-580" misc_feature complement(3216833..3217657) /locus_tag="CMS_3068" /old_locus_tag="CMS3068" /inference="protein motif:HMMPfam:PF05425" /note="HMMPfam hit to PF05425, Copper resistance D, score 4.2e-06" gene complement(3217946..3218233) /gene="hup" /locus_tag="CMS_3069" /old_locus_tag="CMS3069" /db_xref="GeneID:6158563" CDS complement(3217946..3218233) /gene="hup" /locus_tag="CMS_3069" /old_locus_tag="CMS3069" /codon_start=1 /transl_table=11 /product="DNA-binding protein HU" /protein_id="YP_001711691.1" /db_xref="GI:170783357" /db_xref="GeneID:6158563" /translation="MADKSLNRTELVAAVAAESGQSQAAVNGVLDALFSTVATNVADG VKVTIPGWVAFEQTARAARTGRNPQTGEPLEIKASKGVKVSAGSKLKAAVK" misc_feature complement(3217949..3218218) /gene="hup" /locus_tag="CMS_3069" /old_locus_tag="CMS3069" /inference="protein motif:HMMPfam:PF00216" /note="HMMPfam hit to PF00216, Histone-like bacterial DNA-binding protein, score 5.8e-29" gene complement(3218365..3218670) /gene="rpsN" /locus_tag="CMS_3070" /old_locus_tag="CMS3070" /db_xref="GeneID:6158762" CDS complement(3218365..3218670) /gene="rpsN" /locus_tag="CMS_3070" /old_locus_tag="CMS3070" /note="located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="YP_001711692.1" /db_xref="GI:170783358" /db_xref="GeneID:6158762" /translation="MAKKSKIARNEQRKVIVERYAAKRLELKKALVDPNGTDESREAA RAGIQRLPRDASPIRVRNRDGIDGRPRGNLSKFGISRVRFRDMAHRGELPGITKSSW" misc_feature complement(3218371..3218535) /gene="rpsN" /locus_tag="CMS_3070" /old_locus_tag="CMS3070" /inference="protein motif:HMMPfam:PF00253" /note="HMMPfam hit to PF00253, Ribosomal protein S14,score 2.4e-12" gene complement(3218673..3218840) /gene="rpmG" /locus_tag="CMS_3071" /old_locus_tag="CMS3071" /db_xref="GeneID:6158967" CDS complement(3218673..3218840) /gene="rpmG" /locus_tag="CMS_3071" /old_locus_tag="CMS3071" /note="in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="YP_001711693.1" /db_xref="GI:170783359" /db_xref="GeneID:6158967" /translation="MAKQQDVRPIIKLRSTAGTGYTYVTRKNRRNNPDRLVLKKYDPV VRTHVDFREER" misc_feature complement(3218676..3218819) /gene="rpmG" /locus_tag="CMS_3071" /old_locus_tag="CMS3071" /inference="protein motif:HMMPfam:PF00471" /note="HMMPfam hit to PF00471, Ribosomal protein L33,score 1.7e-11" gene complement(3218840..3219076) /gene="rpmB" /locus_tag="CMS_3072" /old_locus_tag="CMS3072" /db_xref="GeneID:6158959" CDS complement(3218840..3219076) /gene="rpmB" /locus_tag="CMS_3072" /old_locus_tag="CMS3072" /note="required for 70S ribosome assembly" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L28" /protein_id="YP_001711694.1" /db_xref="GI:170783360" /db_xref="GeneID:6158959" /translation="MAATCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYYVPSLR RNVKLTLSAKGIKVIDARGIESVVKDILARGVKI" misc_feature complement(3218888..3219070) /gene="rpmB" /locus_tag="CMS_3072" /old_locus_tag="CMS3072" /inference="protein motif:HMMPfam:PF00830" /note="HMMPfam hit to PF00830, Ribosomal protein L28,score 1.4e-24" gene complement(3219271..3219714) /gene="fur" /locus_tag="CMS_3073" /old_locus_tag="CMS3073" /db_xref="GeneID:6158955" CDS complement(3219271..3219714) /gene="fur" /locus_tag="CMS_3073" /old_locus_tag="CMS3073" /codon_start=1 /transl_table=11 /product="ferric uptake regulation protein" /protein_id="YP_001711695.1" /db_xref="GI:170783361" /db_xref="GeneID:6158955" /translation="MKRNTWQREAVRQALDASTEFVSAQRLHARLHDAGSPIGLATVY RALGDLAAEGDADSLQSPDGEALYRTCASGGHHHHLICRVCGKTVEIAADEVESWAHD VAARNGFTAPSHVVDVFGLCAECTRRAAEAADGPTAGVAEAPASA" misc_feature complement(3219358..3219708) /gene="fur" /locus_tag="CMS_3073" /old_locus_tag="CMS3073" /inference="protein motif:HMMPfam:PF01475" /note="HMMPfam hit to PF01475, Ferric-uptake regulator,score 1.9e-23" gene complement(3219711..3220637) /locus_tag="CMS_3074" /old_locus_tag="CMS3074" /db_xref="GeneID:6158704" CDS complement(3219711..3220637) /locus_tag="CMS_3074" /old_locus_tag="CMS3074" /codon_start=1 /transl_table=11 /product="putative ABC transporter integral membrane protein" /protein_id="YP_001711696.1" /db_xref="GI:170783362" /db_xref="GeneID:6158704" /translation="MIHLLADAGDVWSRLFDFSDYGALVALLRNSIIAGAVLGVVGGL IGVFVMTRDLAFAVHGVSELSFAGAAAALLLGVNVVGGSLVGSLIAAIAIGVLGTRAK DRNSIIAVIMPFGLGLGILFLALYDGRASNKFGLLTGQIVSVDNPQLGYLVAISAVVI VGLAVVWRPLMFASVDPDVAAARGVPVRMLSIVFMILLGLGTAVSIQIVGALLVLSLL VTPAAAAMRVSSTPRVVVSLSVLFALASIVGGIMLALGSSIPISPYVTTISFTIYLVC RGIGALRARSGTSGGTRTLTGRGGSTAGRARA" misc_feature complement(order(3219792..3219860,3219870..3219938, 3219999..3220067,3220125..3220193,3220254..3220322, 3220350..3220418,3220491..3220559)) /locus_tag="CMS_3074" /old_locus_tag="CMS3074" /note="7 probable transmembrane helices predicted for CMS3074 by TMHMM2.0 at aa 27-49, 74-96, 106-128, 149-171,191-213, 234-256 and 260-282" misc_feature complement(3219798..3220559) /locus_tag="CMS_3074" /old_locus_tag="CMS3074" /inference="protein motif:HMMPfam:PF00950" /note="HMMPfam hit to PF00950, ABC-3, score 2.7e-31" gene complement(3220634..3221572) /gene="fhuC" /locus_tag="CMS_3075" /old_locus_tag="CMS3075" /db_xref="GeneID:6158564" CDS complement(3220634..3221572) /gene="fhuC" /locus_tag="CMS_3075" /old_locus_tag="CMS3075" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="YP_001711697.1" /db_xref="GI:170783363" /db_xref="GeneID:6158564" /translation="MTGAPVLSLRDATLAFGARTLWSGLDLDVAPGEFVAVLGPNGSG KTSFLKSVLGAQRLTSGEMRFLDEPMRRGARRIGYIPQQKLITAATPVRARDLVGFGV TGHRWGLPISRRAERARVDELLDAVGATAYADAPVATLSGGEQQRLRVAQALASDPRL LLCDEPLLSLDLGHQRVVSELIDRHRRETEAAVVFVTHDVNPVLDMVDRVLYLVGGRF RIGTPDEVLDSEVLSSLYGTPVDVVRVRGRVVVVGATDDPHGHHSHADHDHDEHGDHG PHGLHAAGPEGAGSDAAGSHAAGPEGAVGSTDGRAA" misc_feature complement(3220925..3221479) /gene="fhuC" /locus_tag="CMS_3075" /old_locus_tag="CMS3075" /inference="protein motif:HMMPfam:PF00005" /note="HMMPfam hit to PF00005, ABC transporter, score 4.9e-41" misc_feature complement(3221111..3221155) /gene="fhuC" /locus_tag="CMS_3075" /old_locus_tag="CMS3075" /note="PS00211 ABC transporters family signature." misc_feature complement(3221435..3221458) /gene="fhuC" /locus_tag="CMS_3075" /old_locus_tag="CMS3075" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." gene complement(3221569..3222516) /locus_tag="CMS_3076" /old_locus_tag="CMS3076" /db_xref="GeneID:6158689" CDS complement(3221569..3222516) /locus_tag="CMS_3076" /old_locus_tag="CMS3076" /codon_start=1 /transl_table=11 /product="putative substrate-binding transport protein" /protein_id="YP_001711698.1" /db_xref="GI:170783364" /db_xref="GeneID:6158689" /translation="MNRRPLTALLAVSLLAVPLAGCASGSTTPSADASASGTGTLEVV ASTDVYGDIAQQIGGDDVKVTSIIDSPDKDPHEYQATSRDQLALSTADIVIQNGGGYD DFVDTMIKALPGGKSPVLLNAVDISGFDQKPAEGELNEHVWYDMPTMKKLAEEIEQAF SKADAPGAATFEANEQAFTAKLDGIAQAEAAAKPAGTGKGVAITEPVPLYMTSAMGLE NRTPDEFSEAVEEGTDVPADVLKETLALFAEKKVAALVYNSQTTGATTDQVVAAAKAA GVPVVPVTETLPADLPAGSGYVEWMTENVDAVASAIRGS" sig_peptide complement(3221569..3221673) /locus_tag="CMS_3076" /old_locus_tag="CMS3076" /note="Signal peptide predicted for CMS3076 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.428 between residues 35 and 36" misc_feature complement(3221578..3222495) /locus_tag="CMS_3076" /old_locus_tag="CMS3076" /inference="protein motif:HMMPfam:PF01297" /note="HMMPfam hit to PF01297, Periplasmic solute binding protein, score 1.6e-13" gene complement(3222586..3224028) /gene="sucB" /locus_tag="CMS_3077" /old_locus_tag="CMS3077" /db_xref="GeneID:6158565" CDS complement(3222586..3224028) /gene="sucB" /locus_tag="CMS_3077" /old_locus_tag="CMS3077" /EC_number="2.3.1.61" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase subunit E2" /protein_id="YP_001711699.1" /db_xref="GI:170783365" /db_xref="GeneID:6158565" /translation="MPAAPQRHDDKDRTMADSEFTLPDVGEGLIDAEIVSWRVQPGDQ VALNQVIVEIETAKSLVELPSPFEGTVSGLLVQEGQTVEVGTPIIAIAQGSPSVSGPA ETPAQMALPGETVIEDDTAIENREPAPAPAADETSGAVLVGYGTVGKVASRRRRAEPG DAAPAARHAARPGAQAGAPAARAPRPDSVPAASAVPIIAKPPIRKLAKDLEVDLAEVE ATGLVGEITREDVIRTAQQASVFKNIETPEWPDAREDRIPVKGVRKVIAAAMVQSAFQ APHVSLFVDVDATRTMEFVKRLKASTDFAGVKVSPLLIMAKAMIWAVRRNPTVNSSWT DQEIIVRHYVNLGVAAATPRGLVVPNVKEAQAMSLLELARALEQLTLTARDGKTTPAD MGQGTITITNIGVFGMDTGTPILNPGEVAIVALGTIKQKPWVVDGEVRPRFVTTIGAS FDHRVVDGDVASRFLADVASIIEEPALLLE" misc_feature complement(3222589..3223278) /gene="sucB" /locus_tag="CMS_3077" /old_locus_tag="CMS3077" /inference="protein motif:HMMPfam:PF00198" /note="HMMPfam hit to PF00198, Catalytic domain of components of various dehydrogenase complexes, score 1.3e-101" misc_feature complement(3223324..3223434) /gene="sucB" /locus_tag="CMS_3077" /old_locus_tag="CMS3077" /inference="protein motif:HMMPfam:PF02817" /note="HMMPfam hit to PF02817, E3 binding, score 6.4e-07" misc_feature complement(3223756..3223977) /gene="sucB" /locus_tag="CMS_3077" /old_locus_tag="CMS3077" /inference="protein motif:HMMPfam:PF00364" /note="HMMPfam hit to PF00364, Biotin/lipoyl attachment,score 1.8e-25" gene complement(3224047..3225012) /gene="pdhB" /locus_tag="CMS_3078" /old_locus_tag="CMS3078" /db_xref="GeneID:6158999" CDS complement(3224047..3225012) /gene="pdhB" /locus_tag="CMS_3078" /old_locus_tag="CMS3078" /EC_number="1.2.4.1" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component, beta subunit" /protein_id="YP_001711700.1" /db_xref="GI:170783366" /db_xref="GeneID:6158999" /translation="MPMAKALNAGLRRALEDDDKVLLMGEDIGPLGGVFRITEHLQRD FGARRVIDTPLAESGIVGTAIGLAMRGYRPVCEIQFDGFIYPAFDQITSQLAKITNRH EGAVRMPVVIRVPYGGHIGAIEHHQESPEAYFAHTPGLRVVSPSTPHDAYWMIQEAIQ SDDPVMFFEPKARYRPKGEVDLSAPGLGLHESRVVRSGTDVTLVGHGAMVAMLLQAAE LAAEEGTSVEVVDLRSLSPVDYGPILESVQRTGRLVVAQEAPGHVSVGSEIAATVTER AFYSLEAPVIRVSGFDAPFPPAKLETLYLPDADRILEAVDRSLAY" misc_feature complement(3224080..3224445) /gene="pdhB" /locus_tag="CMS_3078" /old_locus_tag="CMS3078" /inference="protein motif:HMMPfam:PF02780" /note="HMMPfam hit to PF02780, Transketolase, C terminal,score 1.8e-44" misc_feature complement(3224485..3225012) /gene="pdhB" /locus_tag="CMS_3078" /old_locus_tag="CMS3078" /inference="protein motif:HMMPfam:PF02779" /note="HMMPfam hit to PF02779, Transketolase, central region, score 3.1e-65" gene complement(3225099..3226211) /gene="pdhA" /locus_tag="CMS_3079" /old_locus_tag="CMS3079" /db_xref="GeneID:6158854" CDS complement(3225099..3226211) /gene="pdhA" /locus_tag="CMS_3079" /old_locus_tag="CMS3079" /EC_number="1.2.4.1" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase E1 component, alpha subunit" /protein_id="YP_001711701.1" /db_xref="GI:170783367" /db_xref="GeneID:6158854" /translation="MPESDVTVQLLTPAGELAPSDSAEEFLPYFERLTEDEHSGFLRD MRLTRAFDLEATNLQRQGHLGLWAPSTGQEAAQVGSGRATRPQDHVFPAYREHGVALI RGVDPVDIVRLMRGVTHGGWDPAVANFHLYTLVIGSQALHATGYAMGVAFDGDVGTGD PDRDTAVIAYYGDGATSQGDVSEAFVFAASFQTPQVFFLQNNHWAISVPVSTQSRTPL YLRSRGFGVPSTQVDGNDVFASYAVTAKHLDDARNGGGPSFIEALTYRVGAHTSSDDP TKYRTDDELQGWVAKDPIARLEAYLRNQGAPQSLFDGIDEEAKDLAADVRRRTIELTS PALPGIFDHVYSEPHPVTTEQREWLERYEASLEGNR" misc_feature complement(3225219..3226088) /gene="pdhA" /locus_tag="CMS_3079" /old_locus_tag="CMS3079" /inference="protein motif:HMMPfam:PF00676" /note="HMMPfam hit to PF00676, Dehydrogenase, E1 component, score 7.1e-61" gene complement(3226221..3227336) /gene="pat" /locus_tag="CMS_3080" /old_locus_tag="CMS3080" /db_xref="GeneID:6158853" CDS complement(3226221..3227336) /gene="pat" /locus_tag="CMS_3080" /old_locus_tag="CMS3080" /EC_number="2.6.1.-" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /protein_id="YP_001711702.1" /db_xref="GI:170783368" /db_xref="GeneID:6158853" /translation="MIPEPAPLDDAAPVRLRPAIAAMVAYRQGKPAGEDDFKLSSNEN PFEPLPSVLAALDAVRDVNRYPDAGATLLRTALAERFGVTVDHVHAGAGSVAILSQLI TAAAGPGDEVVHAWRSFEAYPTLITVAGATGVPVPNLPDHSHDVDGMIAALTDRTRVV IVCTPNNPTGTLVTEADLERLLAAVPRDVLVLLDEAYGEFVGKEHALDGMRLVADHPN LVVLRTFSKAYGLAGLRIGYAVGHPRILDAARSAAIPLSVTGHAQHAALASLEHEDEL LERVAVLARDRDEAWRALTEQGWDVPRPHGNFVWLATGTETAEVEAQLAAAGLVVRAF AGEGIRVTIGEPASVRKLLKASAEIVQGLPEGHPARR" misc_feature complement(3226257..3227102) /gene="pat" /locus_tag="CMS_3080" /old_locus_tag="CMS3080" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 9.8e-28" misc_feature complement(3226638..3226667) /gene="pat" /locus_tag="CMS_3080" /old_locus_tag="CMS3080" /note="PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site." gene 3227407..3227802 /locus_tag="CMS_3081" /old_locus_tag="CMS3081" /db_xref="GeneID:6158851" CDS 3227407..3227802 /locus_tag="CMS_3081" /old_locus_tag="CMS3081" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711703.1" /db_xref="GI:170783369" /db_xref="GeneID:6158851" /translation="MPRFLVRVVVNAVALWLTTLIVSGTIVTAYEPGDTTATVLTYLL LGAIFGVVNGVIGTAIRIVAFPLYILTLGLIALIVNGLLFLLVGAISDALGFGLTVEG FWWGVLGALLMAFFSWLVGLVLRPVTSRA" sig_peptide 3227407..3227493 /locus_tag="CMS_3081" /old_locus_tag="CMS3081" /note="Signal peptide predicted for CMS3081 by SignalP 2.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.545 between residues 29 and 30" misc_feature 3227407..3227790 /locus_tag="CMS_3081" /old_locus_tag="CMS3081" /inference="protein motif:HMMPfam:PF04020" /note="HMMPfam hit to PF04020, Membrane protein of unknown function, score 1.6e-10" misc_feature order(3227425..3227493,3227521..3227580,3227599..3227667, 3227710..3227778) /locus_tag="CMS_3081" /old_locus_tag="CMS3081" /note="4 probable transmembrane helices predicted for CMS3081 by TMHMM2.0 at aa 7-29, 39-58, 65-87 and 102-124" gene complement(3227811..3229172) /locus_tag="CMS_3082" /old_locus_tag="CMS3082" /db_xref="GeneID:6158566" CDS complement(3227811..3229172) /locus_tag="CMS_3082" /old_locus_tag="CMS3082" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711704.1" /db_xref="GI:170783370" /db_xref="GeneID:6158566" /translation="MTAAVAGLTVTEGGGTAVETDDLTRIAARLDDAGGRLDDHARAL ALPPLVASITGDHDAALDAPRGLLASAAHDARALAADLRRVAAQYVDGERDVDRCVRS ASGEGATDAARALLGGIGGEPDPLRLGGLRLLGVGSMLALHPDGPGRIVLPGVLRDVV SDIAASATRFLPGRPAGDDGVRETTAGLLAALGAVGLLRDAPATVRVRRDALRSAPAT LGDLSERIPDPVPGAPQMRVEEYRAPDGRRRFVAYLGGMVTLDPRTGREDFGPASAVA ALATEGGSAVHAAETALRDAGATADDEVYVIGYSMGGILARSVGDAPGFHVTHELTFG SPVGQLPIREGIDGVAVEHTDDPVPALGGARTSEGDAGDDVVVRTPAFAPTAQAGPLG AHELDTYRETAAEMDASRSPLLERARDELHGFLDGATPVASHLYRAERGPIRPSGAPG GGM" gene complement(3229169..3229480) /locus_tag="CMS_3083" /old_locus_tag="CMS3083" /db_xref="GeneID:6158567" CDS complement(3229169..3229480) /locus_tag="CMS_3083" /old_locus_tag="CMS3083" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711705.1" /db_xref="GI:170783371" /db_xref="GeneID:6158567" /translation="MREQPGGWDAGGGDPLGGTGRGSGSTPGQLRAEALTRAHALAAI ADAVAETQRDIASCRDDPSWSGRAHDAFVRALDDLAGRVALAGTLLHDASAPGCPGAH A" gene 3229613..3230140 /gene="ptpA" /locus_tag="CMS_3084" /old_locus_tag="CMS3084" /db_xref="GeneID:6158568" CDS 3229613..3230140 /gene="ptpA" /locus_tag="CMS_3084" /old_locus_tag="CMS3084" /EC_number="3.1.3.48" /codon_start=1 /transl_table=11 /product="low molecular weight protein-tyrosine-phosphatase" /protein_id="YP_001711706.1" /db_xref="GI:170783372" /db_xref="GeneID:6158568" /translation="MGAPDSPAATAPPVFRIAFVCTGNICRSPMAEVVFRDLVQRAGY ADRVSVTSAGTGDWHVGEQADARTLAALERRGLAGSAHRAKQFDPDTLPDLDLVVVFD RGQERTLRQWARTEADRAKIHLLLSFDPPQAHLRDVPDPYYTDAAMFDRVLGMIERAA RALLAQVEPGIRPPS" misc_feature 3229655..3230110 /gene="ptpA" /locus_tag="CMS_3084" /old_locus_tag="CMS3084" /inference="protein motif:HMMPfam:PF01451" /note="HMMPfam hit to PF01451, Low molecular weight phosphotyrosine protein phosphatase, score 5e-46" gene 3230163..3231536 /gene="purB" /locus_tag="CMS_3085" /old_locus_tag="CMS3085" /db_xref="GeneID:6158889" CDS 3230163..3231536 /gene="purB" /locus_tag="CMS_3085" /old_locus_tag="CMS3085" /EC_number="4.3.2.2" /note="Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="YP_001711707.1" /db_xref="GI:170783373" /db_xref="GeneID:6158889" /translation="MPPQVLSPLDGRYAPVVTELGEHLSEAGLNRARIHVEIEWLIHL TDRSLLSSSPFTDEQKTALREVVEGFGQEQIDALARVEAVTRHDVKAVEYFVRDRLEE LGLGHVAELTHFACTSEDINNLSYALVIDRAVREVWLPKLVSVIGALRERALLFRDDA MLSRTHGQPATPTTLGKELAVFVHRLERLRADVEDVEVLGKFSGATGTFAAHLAADAD VDWPAESRAFVTSLGLVWNPLTTQIESHDWQAELYTRIAHVNRVLHNLCTDVWTYISM GYFRQIPQAGATGSSTMPHKINPIRFENAEANLELSDALLDSLASTLVTSRLQRDLTD STTQRNVGVALGHSLLALDNIGRGLLEIDVDRALLAADLDGNWEILGEAIQTVIRAEI VAGRSSISDPYAVLKELTRGKRVGRDEMRAFVSGLDIGDQAKARLLELTPAGYAGLAS QLVDHIL" misc_feature 3230193..3231110 /gene="purB" /locus_tag="CMS_3085" /old_locus_tag="CMS3085" /inference="protein motif:HMMPfam:PF00206" /note="HMMPfam hit to PF00206, Fumarate lyase, score 7.6e-33" misc_feature 3231027..3231056 /gene="purB" /locus_tag="CMS_3085" /old_locus_tag="CMS3085" /note="PS00163 Fumarate lyases signature." gene complement(3231656..3231925) /locus_tag="CMS_3086" /old_locus_tag="CMS3086" /db_xref="GeneID:6158896" CDS complement(3231656..3231925) /locus_tag="CMS_3086" /old_locus_tag="CMS3086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711708.1" /db_xref="GI:170783374" /db_xref="GeneID:6158896" /translation="MTSNIRKDRMRPAELLGIAGVLAAFVGLIVALSTRPADAQGWTV VIVFTGVAFIGALVMMAMLVLSFKPNRDELQDMDDQDHPDRPTRH" sig_peptide complement(3231656..3231772) /locus_tag="CMS_3086" /old_locus_tag="CMS3086" /note="Signal peptide predicted for CMS3086 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.452 between residues 39 and 40" misc_feature complement(order(3231725..3231793,3231821..3231889)) /locus_tag="CMS_3086" /old_locus_tag="CMS3086" /note="2 probable transmembrane helices predicted for CMS3086 by TMHMM2.0 at aa 13-35 and 45-67" gene complement(3231928..3232602) /locus_tag="CMS_3087" /old_locus_tag="CMS3087" /db_xref="GeneID:6158569" CDS complement(3231928..3232602) /locus_tag="CMS_3087" /old_locus_tag="CMS3087" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_001711709.1" /db_xref="GI:170783375" /db_xref="GeneID:6158569" /translation="MEKEAAVSEDELTFRAAYWPVLLLRALPALALAAFITFSTDHSP SLGLVAFGVFAILSGPITAGLGARVLRGPAARIRTGAIVQGAITAVAGVAALLARDGG VLVLLYVVSVWAVVTGFLELVAGLRSRGRVPGATDAVTAGALTVVLAVAFLLVPPDLV VQYGGVEQREGQLTAPVVAVGLLGAYAAIVGVFLVIAALSMKWGTSTPTATSAADAPR TTESAS" misc_feature complement(order(3232012..3232080,3232123..3232191, 3232225..3232293,3232306..3232374,3232393..3232461, 3232489..3232542)) /locus_tag="CMS_3087" /old_locus_tag="CMS3087" /note="6 probable transmembrane helices predicted for CMS3087 by TMHMM2.0 at aa 21-38, 48-70, 77-99, 104-126,138-160 and 175-197" gene 3232691..3232807 /locus_tag="CMS_3088" /old_locus_tag="CMS3088" /db_xref="GeneID:6158570" CDS 3232691..3232807 /locus_tag="CMS_3088" /old_locus_tag="CMS3088" /codon_start=1 /transl_table=11 /product="putative small membrane protein" /protein_id="YP_001711710.1" /db_xref="GI:170783376" /db_xref="GeneID:6158570" /translation="MTSPLPRLAAAAAGAVVGLAVVCAVGVACGIVYANRAF" sig_peptide 3232691..3232780 /locus_tag="CMS_3088" /old_locus_tag="CMS3088" /note="Signal peptide predicted for CMS3088 by SignalP 2.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.656 between residues 30 and 31" misc_feature 3232718..3232786 /locus_tag="CMS_3088" /old_locus_tag="CMS3088" /note="1 probable transmembrane helix predicted for CMS3088 by TMHMM2.0 at aa 10-32" misc_feature 3232745..3232777 /locus_tag="CMS_3088" /old_locus_tag="CMS3088" /note="PS00013 Prokaryotic membrane lipoprotein lipid attachment site." gene 3232927..3233811 /locus_tag="CMS_3089" /old_locus_tag="CMS3089" /db_xref="GeneID:6158571" CDS 3232927..3233811 /locus_tag="CMS_3089" /old_locus_tag="CMS3089" /codon_start=1 /transl_table=11 /product="putative glucokinase" /protein_id="YP_001711711.1" /db_xref="GI:170783377" /db_xref="GeneID:6158571" /translation="MPQPETAPRPASETGRAAGGFIPVDRAVVAAPEGAAEHLARRDR LALGIDIGGTTLKAGIVDVTTGIRLTERMTVAKPVGGEPEDIADVIAEIVLELTPDED LPVGVGVPGIVRDGIVRSSAHISDRWLGMDARTAIRERSGIDVLTVNDADAAGVAELE YGVLQGRDGLVILTTLGTGIGTALLHDGTLIPNSELGHVHIDGGDYEMQAAFSAVRRE GLTFEAWAARLERYYRHLESIMSPDLIVVGGAAAHEFARFSGFLHLDTEIIAASRGND AGLVGAALLAHRAGVAPD" misc_feature 3233068..3233571 /locus_tag="CMS_3089" /old_locus_tag="CMS3089" /inference="protein motif:HMMPfam:PF00480" /note="HMMPfam hit to PF00480, ROK, score 1.3e-05" gene 3234028..3234999 /locus_tag="CMS_3090" /old_locus_tag="CMS3090" /db_xref="GeneID:6158572" CDS 3234028..3234999 /locus_tag="CMS_3090" /old_locus_tag="CMS3090" /codon_start=1 /transl_table=11 /product="putative glycerate kinase" /protein_id="YP_001711712.1" /db_xref="GI:170783378" /db_xref="GeneID:6158572" /translation="MADGGQGTLDVLAAAVPGARRVPVRVIGPDDRPVDAHWLLLPDG AGVVEVASTSGITLLDPLRPLTAHTRGFGQAVRAALDAGVPRLLLALGGSSSTDGGVG ALRELGARASRADGSPAGDGGFALAGIASLDLTRIRALPTGGARILGDVRAPLTGPEG AAAVYGPQKGATPADVRALDAGLAHLAALLGVDPATPGTGAAGGTAAGLVAWGAVVGS GSAGVADAIGLAGLLADADVVITGEGRFDAQSRTGKVASHVLDVARAHGTAAILVAGS VAAPTVGFAAAVSLTDLAGSADSARADAVTWLEHAAEDVARGRAWRG" misc_feature 3234028..3234993 /locus_tag="CMS_3090" /old_locus_tag="CMS3090" /inference="protein motif:HMMPfam:PF02595" /note="HMMPfam hit to PF02595, Glycerate kinase, score 2.8e-35" gene complement(3235012..3236274) /locus_tag="CMS_3091" /old_locus_tag="CMS3091" /db_xref="GeneID:6158573" CDS complement(3235012..3236274) /locus_tag="CMS_3091" /old_locus_tag="CMS3091" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="YP_001711713.1" /db_xref="GI:170783379" /db_xref="GeneID:6158573" /translation="MRIAFVSLHTSPIQTPSTGDAGGLNVYLLELARSLGRQGHEVRL ITRATDPADPAVLPVAPGVELLSLRAGPVGPLAKEELPGITDAFADALAALPPADVVH AHYWLSAVAALPVARAWGVPHVLTLHSVSAGKNRRLVAGDTPEPASRLADEGRLVRAS DLVVASAASEKRLLVEAYDADPAAVHVVAPGVEEAFLREPSGRDGGGRVRIVLLGRIQ PLKGQDVALRAMALLDPATRPLLVIAGGISPGRDAYAASLHALVRSLGLEDDVVFVGA LDREATARVLAGAHLALMPSAAETYGLVALEAAACGTPVVASRTEGLVDSVRDGVSGV FVPTRDPADWARAIRDLLADRPALARLSASARAHAARRTWDVAAADVAEEYRALRERL QEPSRERSRGRGAAGAAGRADPAAVARD" misc_feature complement(3235171..3235692) /locus_tag="CMS_3091" /old_locus_tag="CMS3091" /inference="protein motif:HMMPfam:PF00534" /note="HMMPfam hit to PF00534, Glycosyl transferase, group 1, score 4.3e-37" gene 3236457..3236846 /locus_tag="CMS_3092" /old_locus_tag="CMS3092" /db_xref="GeneID:6158574" CDS 3236457..3236846 /locus_tag="CMS_3092" /old_locus_tag="CMS3092" /codon_start=1 /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_001711714.1" /db_xref="GI:170783380" /db_xref="GeneID:6158574" /translation="MTRPAGTATMQIGELAERTGLSHRTLRHYDETGLLRPSGRSEGG FRLYTDDDLERLLLIRRMKPLGFSLEEMMRLLEVSDALDAAGPDDDTASLRADLAAFV ADAEERRRRLAEHLAMADEFLDRLRAR" misc_feature 3236487..3236600 /locus_tag="CMS_3092" /old_locus_tag="CMS3092" /inference="protein motif:HMMPfam:PF00376" /note="HMMPfam hit to PF00376, Bacterial regulatory protein, MerR, score 1.6e-11" misc_feature 3236493..3236561 /locus_tag="CMS_3092" /old_locus_tag="CMS3092" /note="PS00552 Bacterial regulatory proteins, merR family signature." gene 3236945..3238570 /gene="prfC" /locus_tag="CMS_3093" /old_locus_tag="CMS3093" /db_xref="GeneID:6158575" CDS 3236945..3238570 /gene="prfC" /locus_tag="CMS_3093" /old_locus_tag="CMS3093" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="YP_001711715.1" /db_xref="GI:170783381" /db_xref="GeneID:6158575" /translation="MSTITPPRAPASASASPVLREASRRRTFAVISHPDAGKSTLTEA LLLHAHAIGSAGAVHGKQGRKSTVSDWMDMEKERGISVSSAAIQFTHRDTVMNVVDTP GHADFSEDTYRVLSAVDAAIMLVDASRGLETQTMKLFEVCRQRRIPIITVINKWDRPG REPLDLMDEIKERTGLLPTPLTWPVGESGAFFGVVDRSTGECVHFTRTAGGASIAPET RMSPDEALAEAGSAWTNAVEESELLHEEGQDHDEESFLARRTTPVLFAAAVLNFGVTH ILDALDAIAPAAQPRPDEQDRTRPVEEDFSGFVFKVQSGMNTAHRDRLAFMRICSGVF HRGMTVTHAQTGRPFVTKYAQQLFGRERSTVDDAYPGDVVGLVNASNIRVGDTLFDGA PVTFPRLPQFAPELFRVVRSKDTSTHKQFRKGIEQLDHEGVIQVMRSDLRGDQAPVLG AVGPMQFEVVVERMTNEFRAPLRMEPLEYQVARITDAASAPALAKTIGVEVLVRSDGT HIALITTPWRLKAIQRDSPELTLVDAATALPDA" misc_feature 3237011..3237811 /gene="prfC" /locus_tag="CMS_3093" /old_locus_tag="CMS3093" /inference="protein motif:HMMPfam:PF00009" /note="HMMPfam hit to PF00009, Protein synthesis factor,GTP-binding, score 6.8e-65" misc_feature 3237152..3237199 /gene="prfC" /locus_tag="CMS_3093" /old_locus_tag="CMS3093" /note="PS00301 GTP-binding elongation factors signature." misc_feature 3237908..3238111 /gene="prfC" /locus_tag="CMS_3093" /old_locus_tag="CMS3093" /inference="protein motif:HMMPfam:PF03144" /note="HMMPfam hit to PF03144, Elongation factor Tu,domain 2, score 1.6e-06" gene 3238694..3239116 /locus_tag="CMS_3094" /old_locus_tag="CMS3094" /db_xref="GeneID:6158879" CDS 3238694..3239116 /locus_tag="CMS_3094" /old_locus_tag="CMS3094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711716.1" /db_xref="GI:170783382" /db_xref="GeneID:6158879" /translation="MTSLAGHTAAADTAPVSDPAIDAVPASAADAPACGETIAVRGPA IDAETRCIHYGSPLDVVALRAPCCDAWYPCHLCHAAVADHPLAVIPRTEHHLPAALCG VCRATMSVPEYLAADSCPNCGAEFNPGCAAHAHLYFAP" misc_feature 3238793..3238936 /locus_tag="CMS_3094" /old_locus_tag="CMS3094" /note="PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature." misc_feature 3238844..3239071 /locus_tag="CMS_3094" /old_locus_tag="CMS3094" /inference="protein motif:HMMPfam:PF05495" /note="HMMPfam hit to PF05495, CHY zinc finger, score 2.3e-21" gene complement(3239233..3240612) /gene="dnaB" /locus_tag="CMS_3095" /old_locus_tag="CMS3095" /db_xref="GeneID:6158576" CDS complement(3239233..3240612) /gene="dnaB" /locus_tag="CMS_3095" /old_locus_tag="CMS3095" /EC_number="3.1.-.-" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="YP_001711717.1" /db_xref="GI:170783383" /db_xref="GeneID:6158576" /translation="MSIAHLGLAGERDERDKRAGHERTPPHDLLAEQSAIGGMLLSKD AVADAVEQVRAIDFYIPKHEIIFDAILSLYSHGEPTDVIAVTDELTKLGELSRAGGAD YLHTLTSVVPTAANAGFYASIVAEKAVLRRLVEAGTRIVQMGYASEGEVVDLVNNAQA EIYGVTGGVEAEDYVPLTDAVTVAIDEIEAAKGKDGQMTGVPTGFADLDALTNGLHPG QLIIVAARPALGKSTLALDFARAASIKYDMPSIFFSLEMGRSEIAMRLLSAEASVPLQ SMRKGTVDARDWTTIAQTRGRINDAPLYIDDSPNMTLVEIRAKCRRLKQKVGLKLVVI DYLQLMTSGKKVESRQQEVSEFSRALKLMAKELQVPVIALSQLNRGPEQRADKMPAIS DLRESGSLEQDADMVILLHRESAYEKDNPRAGEADFIVAKHRNGPTGTITVGFHGHFS RFADMPAGG" misc_feature complement(3239431..3240024) /gene="dnaB" /locus_tag="CMS_3095" /old_locus_tag="CMS3095" /inference="protein motif:HMMPfam:PF03796" /note="HMMPfam hit to PF03796, DnaB-like helicase,C-terminal, score 2.9e-111" misc_feature complement(3239917..3239940) /gene="dnaB" /locus_tag="CMS_3095" /old_locus_tag="CMS3095" /note="PS00017 ATP/GTP-binding site motif A (P-loop)." misc_feature complement(3240235..3240543) /gene="dnaB" /locus_tag="CMS_3095" /old_locus_tag="CMS3095" /inference="protein motif:HMMPfam:PF00772" /note="HMMPfam hit to PF00772, DnaB-like helicase,N-terminal, score 4.2e-38" gene complement(3241069..3241521) /gene="rplI" /locus_tag="CMS_3096" /old_locus_tag="CMS3096" /db_xref="GeneID:6158665" CDS complement(3241069..3241521) /gene="rplI" /locus_tag="CMS_3096" /old_locus_tag="CMS3096" /note="in Escherichia coli this protein is wrapped around the base of the L1 stalk" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /protein_id="YP_001711718.1" /db_xref="GI:170783384" /db_xref="GeneID:6158665" /translation="MSKVILTTEVSGLGSPGDVVEVKNGFSRNYLVPQGFAVIWSRGG EKQIEQIKAARAAREHATIEEAQDLKSRLEAKIVKLTVKAGQGGRLFGSVKTSDIAKA VEESGIGQVDKRKIEIPNPIKGTGNHEATIRLRDDIVATISLQVVAAK" misc_feature complement(3241075..3241335) /gene="rplI" /locus_tag="CMS_3096" /old_locus_tag="CMS3096" /inference="protein motif:HMMPfam:PF03948" /note="HMMPfam hit to PF03948, Ribosomal protein L9, score 4.6e-22" misc_feature complement(3241351..3241518) /gene="rplI" /locus_tag="CMS_3096" /old_locus_tag="CMS3096" /inference="protein motif:HMMPfam:PF01281" /note="HMMPfam hit to PF01281, Ribosomal protein L9, score 4e-15" misc_feature complement(3241399..3241482) /gene="rplI" /locus_tag="CMS_3096" /old_locus_tag="CMS3096" /note="PS00651 Ribosomal protein L9 signature." gene complement(3241533..3241796) /gene="rpsR" /locus_tag="CMS_3097" /old_locus_tag="CMS3097" /db_xref="GeneID:6158946" CDS complement(3241533..3241796) /gene="rpsR" /locus_tag="CMS_3097" /old_locus_tag="CMS3097" /note="binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S18" /protein_id="YP_001711719.1" /db_xref="GI:170783385" /db_xref="GeneID:6158946" /translation="MAGKSSGDRRKLLRGAKVGKNAAPAKSIRVGVIDYKDVATLRKF ISERGKIRARRITGVSVQEQRLIARAVKNAREMALLPYAGSGR" misc_feature complement(3241557..3241718) /gene="rpsR" /locus_tag="CMS_3097" /old_locus_tag="CMS3097" /inference="protein motif:HMMPfam:PF01084" /note="HMMPfam hit to PF01084, Ribosomal protein S18,score 2.6e-26" misc_feature complement(3241629..3241700) /gene="rpsR" /locus_tag="CMS_3097" /old_locus_tag="CMS3097" /note="PS00057 Ribosomal protein S18 signature." gene complement(3241833..3242387) /gene="ssb" /locus_tag="CMS_3098" /old_locus_tag="CMS3098" /db_xref="GeneID:6158969" CDS complement(3241833..3242387) /gene="ssb" /locus_tag="CMS_3098" /old_locus_tag="CMS3098" /note="binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA" /codon_start=1 /transl_table=11 /product="single-stranded DNA-binding protein" /protein_id="YP_001711720.1" /db_xref="GI:170783386" /db_xref="GeneID:6158969" /translation="MADETIITVVGNLTSDPELRYTQNGLAVANFTIASTPRSFDRAS NDWKDGNALFLRASVWREFAEHVASSLTKGSRVVATGRLKQRSYETKEGEKRTSIELE VDEIGPSLRYATAQVTRAAGGGGNGGGGNSGGGGRGQFGGGQPQQQQVAEEPWGTPAS SGGNSGGGDGGWSNPGNFNDETPF" misc_feature complement(3242058..3242369) /gene="ssb" /locus_tag="CMS_3098" /old_locus_tag="CMS3098" /inference="protein motif:HMMPfam:PF00436" /note="HMMPfam hit to PF00436, Single-strand binding protein/Primosomal replication protein n, score 1.3e-26" gene complement(3242391..3242855) /gene="rpsF" /locus_tag="CMS_3099" /old_locus_tag="CMS3099" /db_xref="GeneID:6158997" CDS complement(3242391..3242855) /gene="rpsF" /locus_tag="CMS_3099" /old_locus_tag="CMS3099" /note="binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S6" /protein_id="YP_001711721.1" /db_xref="GI:170783387" /db_xref="GeneID:6158997" /translation="MTHQYELMVILDPEIDERTVAPSLDKFLNVIRTSGGTVDNVDVW GRRRLAYEINKKNEGIYAVVQLTATSEATQELDRQLGLSEAVMRTKVLRAEEAMAMVA SARKLADEKAARKAAATSKAADAAPQAPATDAAPATPGKPAAQAASSEKTGE" misc_feature complement(3242574..3242849) /gene="rpsF" /locus_tag="CMS_3099" /old_locus_tag="CMS3099" /inference="protein motif:HMMPfam:PF01250" /note="HMMPfam hit to PF01250, Ribosomal protein S6, score 2.3e-32" misc_feature complement(3242694..3242723) /gene="rpsF" /locus_tag="CMS_3099" /old_locus_tag="CMS3099" /note="PS01048 Ribosomal protein S6 signature." gene complement(3243019..3244386) /locus_tag="CMS_3100" /old_locus_tag="CMS3100" /db_xref="GeneID:6158966" CDS complement(3243019..3244386) /locus_tag="CMS_3100" /old_locus_tag="CMS3100" /codon_start=1 /transl_table=11 /product="putative RNA nucleotidyltransferase" /protein_id="YP_001711722.1" /db_xref="GI:170783388" /db_xref="GeneID:6158966" /translation="MLARAFHEAGHELALVGGPVRDAFLGRAATDLDLTTDARPDRIL EIVKPVADAHWDIGRAFGTIGARVKGEQVEITTYRTDQYDGVSRKPEVEFGSSLEEDL VRRDFTVNALAVRLPQVVLVDPSGGIDDLLAQVLRTPVAPEVSFGDDPLRMMRAVRFA SQLGFRLDDAALAAIHDMAPRILDISVERVSDELSKLLRTPEPRAGLDLLVEGGLADH VLPELPAMKLEADEHHRHKDVYQHSLQVLDQAIDHERSRHPGDAPDLVLRLAALLHDI GKPSTRRLEPGGVVTFHHHDVVGSKMAKRRLRALRFDNDTIASVARLIELHLRFFGYT EGGWTDSAVRRYVRDAGPELERLHMLTRADVTTQNRRKADRLGFAYDDLEARIAELAE QEEMAAVRPDLDGEAIMRILDVPPGPVVGRAYRFLLELRLDEGPLPEDEAERRLVAWW AAEQG" misc_feature complement(3243196..3243672) /locus_tag="CMS_3100" /old_locus_tag="CMS3100" /inference="protein motif:HMMPfam:PF01966" /note="HMMPfam hit to PF01966, Metal-dependent phosphohydrolase, HD subdomain, score 6.6e-13" misc_feature complement(3243700..3244164) /locus_tag="CMS_3100" /old_locus_tag="CMS3100" /inference="protein motif:HMMPfam:PF01743" /note="HMMPfam hit to PF01743, Polynucleotide adenylyltransferase, score 4.6e-60" gene 3244542..3246827 /locus_tag="CMS_3101" /old_locus_tag="CMS3101" /db_xref="GeneID:6158577" CDS 3244542..3246827 /locus_tag="CMS_3101" /old_locus_tag="CMS3101" /codon_start=1 /transl_table=11 /product="putative sortase-sorted surface-anchored protein" /protein_id="YP_001711723.1" /db_xref="GI:170783389" /db_xref="GeneID:6158577" /translation="MHAAPRHDVGRTRTDRALRLIRRSARRTISTLVCVTVAAGTLAA GTVAGPSTLAHAATEGVTLTVAPAAEGILTPGEDLAVTVSVVNATDAAVPAGRIDLDL NRTVLDTRAKVDGWLDTASTDQNTRTGPRVGRTDTPEVPAGGTVDVAISVPSATVALQ GSRGGFGPRGLTAELEVGGADVATGRGAVVWSPGADPAPTPVAAVMPLTVPPSASDFV DAEALATYTAPGGTLTRQLDAVHGRPVAVGIDPRIIASIRILGADAPASAVEWLQRLR EMPNETFALAWADADVAVQAQAGAATLLAPTDTTYAVRANRFAAPGSTPTPTPSAAPT ATESPAASGAGDGPTVAGAETAAPAETPAPSSSPEPSPTPTAPALAPVPSLADLTAWD YTISGVSWPAAGTVTSGDLGVLAASGTTTAILASGDVQSTGTASVGATGEIGDTTVLV TDSRVSALVDQALSAETDEAFGITLAQLSATLAADARAADGHVVVAALERGWAASGGR LGPLLDAIQGLPFADAAQLGAAFATAPVPLQVVDHPEDPTRVQRVADAMSLEAQVDAF AKSVERPELITGQQRMLLLATLANRWRDDPDGLVTVQDGYTAQADALLGSVAITTRQN TVISDTTSLLINVSNELDQPVTVRLSIIAGSGRIRVDDSALVTVPAHGSASARPPITA ISNGDVVVTARLTTEDGSVQIGESAPVELFIRAGFEAVVTTLFVAAVALLFGFGLFRS IRKRRRARARQLAGLPEEIDD" sig_peptide 3244638..3244709 /locus_tag="CMS_3101" /old_locus_tag="CMS3101" /note="Signal peptide predicted for CMS3101 by SignalP 2.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.968 between residues 24 and 25" misc_feature 3246696..3246764 /locus_tag="CMS_3101" /old_locus_tag="CMS3101" /note="1 probable transmembrane helix predicted for CMS3101 by TMHMM2.0 at aa 687-709" gene 3246867..3248519 /locus_tag="CMS_3102" /old_locus_tag="CMS3102" /db_xref="GeneID:6158578" CDS 3246867..3248519 /locus_tag="CMS_3102" /old_locus_tag="CMS3102" /codon_start=1 /transl_table=11 /product="integral membrane protein" /protein_id="YP_001711724.1" /db_xref="GI:170783390" /db_xref="GeneID:6158578" /translation="MTASPAPRGGIGRASALLASGTFVSRILGFVKAIVLLQTIGATL GSSNAFSNANQLPNNIYVIIAGGVLNAVLVPQVVRAAKHADGGAGYINKLVTIAIVVL GGVTILATVGAPVVSRLYAATLPPDVFALVVAFAYWCLPQILFYGLYAVLGEVLNARG SFGPFTWAPVLNNVVAIAGLLVFQAMFGSGSRPVDDWSLDKIVVLAGSATLGVVAQAL ILFVFWRRVGLRFRFDFAWRGVGLGTAGRLAGWTFGMLVVTQLAGIAQSNVANIAATS DSPSSTILLNAWLFFMLPHSIFAVSIATAYFTRMSTHAGEGEGEGEGEGDHDSMRADL SSAVRLVALMTVLSTALIAVLAGPVARVMVSGDIGEVRGYGIVLIAFILGLPAFSTLF VLQRAFYALSDTRTPFLIQCAQVVLFIAGALVIAQQPVERIGVGLAVLQTVTVTGQAV LAAGLLRRRIGRIDGRRILRSAVRFVVAAVPTALVGIALLSLVSGGAFDGVGVASKGQ ALLVGIPLAAVMTAVYLAALAAMRSSELQQLAGPVMRRIRRR" misc_feature order(3246930..3246998,3247041..3247109,3247146..3247214, 3247257..3247325,3247359..3247427,3247470..3247538, 3247599..3247667,3247710..3247778,3247884..3247952, 3247980..3248048,3248085..3248153,3248163..3248231, 3248292..3248360,3248388..3248456) /locus_tag="CMS_3102" /old_locus_tag="CMS3102" /note="14 probable transmembrane helices predicted for CMS3102 by TMHMM2.0 at aa 22-44, 59-81, 94-116, 131-153,165-187, 202-224, 245-267, 282-304, 340-362, 372-394,407-429, 433-455, 476-498 and 508-530" misc_feature 3246972..3248411 /locus_tag="CMS_3102" /old_locus_tag="CMS3102" /inference="protein motif:HMMPfam:PF03023" /note="HMMPfam hit to PF03023, Virulence factor MVIN-like,score 9.2e-54" gene 3248676..3249713 /gene="trxB" /locus_tag="CMS_3103" /old_locus_tag="CMS3103" /db_xref="GeneID:6158579" CDS 3248676..3249713 /gene="trxB" /locus_tag="CMS_3103" /old_locus_tag="CMS3103" /EC_number="1.8.1.9" /codon_start=1 /transl_table=11 /product="thioredoxin reductase (NADPH)" /protein_id="YP_001711725.1" /db_xref="GI:170783391" /db_xref="GeneID:6158579" /translation="MRQIIIIGSGPAGYTAAIYAARANLTPLLIASSVEAGGELMNTT EVENYPGFTDGIQGPDLMMAMQAQAERFGTEVVLDDVTSVDLKGDVKRVTLGNGDVHE SLAVIAATGSAYRKLGLPAEDRFSGHGVSWCATCDGFFFRQKTIAVVGGGDSAMEEAA FLTRFAEKVYVIHRKDSLRASKIMQDRAFENPKIEFVWNAQVVDITGGEKVDGVVLED TVTGEQRRLALDGLFIAIGNDPRTHLFHQQLELTSEGTIAVEGRSSRTNLPGVFAAGD VIDPTYRQAITAAASGTVAALDAEHFLASLPDTLLDAASDGPDGPAGHGAPAAGSVVD PDGELVGADHQ" misc_feature 3248682..3249536 /gene="trxB" /locus_tag="CMS_3103" /old_locus_tag="CMS3103" /inference="protein motif:HMMPfam:PF00070" /note="HMMPfam hit to PF00070, FAD-dependent pyridine nucleotide-disulphide oxidoreductase, score 1.2e-71" misc_feature 3249072..3249134 /gene="trxB" /locus_tag="CMS_3103" /old_locus_tag="CMS3103" /note="PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site." gene 3249782..3250105 /gene="trxA" /locus_tag="CMS_3104" /old_locus_tag="CMS3104" /db_xref="GeneID:6159080" CDS 3249782..3250105 /gene="trxA" /locus_tag="CMS_3104" /old_locus_tag="CMS3104" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="YP_001711726.1" /db_xref="GI:170783392" /db_xref="GeneID:6159080" /translation="MSHSRDVTDASFQADVLDAEKTVIVDFWAPWCGPCKAVSPVLDQ IAAENPGIELVKIDVDDNPEIAMKYKITSIPAMKVFQKGEVVKTVIGAKPKPALEQEF ADFLK" misc_feature 3249788..3250102 /gene="trxA" /locus_tag="CMS_3104" /old_locus_tag="CMS3104" /inference="protein motif:HMMPfam:PF00085" /note="HMMPfam hit to PF00085, Thioredoxin-related, score 8e-32" misc_feature 3249851..3249907 /gene="trxA" /locus_tag="CMS_3104" /old_locus_tag="CMS3104" /note="PS00194 Thioredoxin family active site." gene 3250272..3251594 /locus_tag="CMS_3105" /old_locus_tag="CMS3105" /db_xref="GeneID:6159079" CDS 3250272..3251594 /locus_tag="CMS_3105" /old_locus_tag="CMS3105" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /protein_id="YP_001711727.1" /db_xref="GI:170783393" /db_xref="GeneID:6159079" /translation="MTPAGSPRESAGTNLDPWFPHYAERTSGLSASEVRALFAVASRP EVVSLAGGMPFVSALPQELIVTAMEKVMRERGSVALQYGGGQGTPELREDILEIMALE GIRGSVDDIVTTTGSQQALDLVTKLFIDPGDVILAEAPSYVGAIGVFRSYQAVVEHVV MDDDGLVPEALREAIARIRGEGRTIKFLYTVPNFHNPAGVTMSAARRPEILEICRSND ILVLEDNPYGLLWFDRPAPDAMRSLDDEGVIYLGSFSKTLAPGFRVGWALAPHAIREK LILAQESAVLSPSSFSQLIISEYLHASDWKGQIDTFRGVYRERRDATLSALQEHLPGL TWTVPNGGFYVWLKLPEQLDSKQMLPRAVTALVAYTPGTAFYADGRGRDAIRLSFCYP TPERIREGVRRMAGVIDDELDLLTTFSGTGALASRPTTSVVTPPPDLD" misc_feature 3250560..3251495 /locus_tag="CMS_3105" /old_locus_tag="CMS3105" /inference="protein motif:HMMPfam:PF00155" /note="HMMPfam hit to PF00155, Aminotransferase, class I and II, score 2.8e-12" gene 3251638..3252603 /gene="ddlB" /locus_tag="CMS_3106" /old_locus_tag="CMS3106" /db_xref="GeneID:6158580" CDS 3251638..3252603 /gene="ddlB" /locus_tag="CMS_3106" /old_locus_tag="CMS3106" /EC_number="6.3.2.4" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase B" /protein_id="YP_001711728.1" /db_xref="GI:170783394" /db_xref="GeneID:6158580" /translation="MTAHEPLSVLVLAGGISHERDVSLRSGRRVVDALRGAGVVASLR DPDATLLDFLRETPPAVVWPVLHGASGEDGALLGLLELAGVPYVGSSARAARLAWDKP TAKAIAGTVGIRTPRSVTLPKDTFRELGAAAVLRLVTEAVPAPYAVKPARGGSAQGVT IVRDADALPRAMVDAYTYGDVALIEQLIEGTEVAIGVIDTGAGPEALPATEIVPTSGV YGYEARYNAGLTRFYTPARISPEEAAAASTAAVGIHRALGIGQMSRVDIIIDAAGEPW FLEVNVIPGLTETSLLPQGLAAAGIEVGDLYRRLAEAARDASTIR" misc_feature 3251656..3251934 /gene="ddlB" /locus_tag="CMS_3106" /old_locus_tag="CMS3106" /inference="protein motif:HMMPfam:PF01820" /note="HMMPfam hit to PF01820, D-alanine--D-alanine ligase, N-terminal, score 2.8e-12" misc_feature 3251935..3252573 /gene="ddlB" /locus_tag="CMS_3106" /old_locus_tag="CMS3106" /inference="protein motif:HMMPfam:PF07478" /note="HMMPfam hit to PF07478, D-alanine--D-alanine ligase, C-terminal, score 1.9e-39" gene complement(3252656..3253648) /gene="parB" /locus_tag="CMS_3107" /old_locus_tag="CMS3107" /db_xref="GeneID:6158657" CDS complement(3252656..3253648) /gene="parB" /locus_tag="CMS_3107" /old_locus_tag="CMS3107" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein ParB" /protein_id="YP_001711729.1" /db_xref="GI:170783395" /db_xref="GeneID:6158657" /translation="MATKRTGLGRGIGALIPTSDERSRPVDVFFPDSIGAGAPSGVHQ GDAQGTSEPELVAVPGARLANLDPADITPNAQQPRTDFRQEELQELMVSIREYGVLQP IVVRPLGADADGRARYELVMGERRLRATKELGLHTIPAVIKDTADESMLRDALLENLH RSELNPLEEASAYQQLLADFAITQDELAQRLGRSRPQITNTIRLLRLPEDVQHRVAAG VLSAGHARAILSSGDEDAMRHLAEKIVNEDLSVRAAEAAAQRGQKATKPRKSSTSARN AHLDETAQRIGDHLNTSVRVTMSAQKGQIVIDFATVGDLTRIAQEMGVPHADAS" misc_feature complement(3253172..3253459) /gene="parB" /locus_tag="CMS_3107" /old_locus_tag="CMS3107" /inference="protein motif:HMMPfam:PF02195" /note="HMMPfam hit to PF02195, ParB-like nuclease, score 3e-28" gene complement(3253648..3254529) /gene="parA" /locus_tag="CMS_3108" /old_locus_tag="CMS3108" /db_xref="GeneID:6158850" CDS complement(3253648..3254529) /gene="parA" /locus_tag="CMS_3108" /old_locus_tag="CMS3108" /codon_start=1 /transl_table=11 /product="putative chromosome partitioning protein ParA" /protein_id="YP_001711730.1" /db_xref="GI:170783396" /db_xref="GeneID:6158850" /translation="MDDDLSPIARELSETSRRRKALAGLVLPRPTRTRVFTIANQKGG VGKTTSTVNLAAALAKSGSRTLVIDLDPQGNASTALGADRSSDLTSVYDVLVNSAPVE DAVQSSPEFDTLFCVPATIHLAGAEIELVNLPQRERRLRLALDAFLASDRGQDFDYVL IDCPPSLGLLTINAFSAAKEVLIPIQCEYYALEGLSQLLSNIELISQHLNPELSMSTI LLTMYDGRTNLAQQVAAEVREHFPQQTLTTLIPRSVRISEAPSYGQSVISYDPNSPGA LSYLEAAAEIAHRGAQN" misc_feature complement(3253756..3254424) /gene="parA" /locus_tag="CMS_3108" /old_locus_tag="CMS3108" /inference="protein motif:HMMPfam:PF01656" /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide synthase, score 3.2e-61" gene complement(3254679..3255314) /gene="gidB" /locus_tag="CMS_3109" /old_locus_tag="CMS3109" /db_xref="GeneID:6158849" CDS complement(3254679..3255314) /gene="gidB" /locus_tag="CMS_3109" /old_locus_tag="CMS3109" /note="glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA" /codon_start=1 /transl_table=11 /product="16S rRNA methyltransferase GidB" /protein_id="YP_001711731.1" /db_xref="GI:170783397" /db_xref="GeneID:6158849" /translation="MPEHTSVEMEPPIAASLFGVRMPVAREFASQLGSRGEELGLIGP LEPPRLWSRHIINSVLVAPLLNPGVVGDIGTGAGLPGLVLAIARPDVDFVLIEPMERR VAWLEEQVAHLGLDNVQVRRARAEDVANEISLDQVTARAVSAFSKLIPLTVPLVKTGG ELVLMKGANAEREVEAASRAIRKHHLEDVEVITLGAGQVDEVTRVIRARVA" gene complement(3255417..3255614) /locus_tag="CMS_3110" /old_locus_tag="CMS3110" /db_xref="GeneID:6158716" CDS complement(3255417..3255614) /locus_tag="CMS_3110" /old_locus_tag="CMS3110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711732.1" /db_xref="GI:170783398" /db_xref="GeneID:6158716" /translation="MFHVKHAMRRMEVNVVWRSLHKNSSKCDTSSRETCFTWNIPRAL SSTAATERGTARVIVARDDRR" gene complement(3255879..3256409) /locus_tag="CMS_3111" /old_locus_tag="CMS3111" /db_xref="GeneID:6158581" CDS complement(3255879..3256409) /locus_tag="CMS_3111" /old_locus_tag="CMS3111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711733.1" /db_xref="GI:170783399" /db_xref="GeneID:6158581" /translation="MTDVANGTDHDGTAPTADEVETEVTTSGVDEGDIAADYIEELLD ICDLDGDIDIDQRGGRAYVSVDAADSEDLRLLSNPETVTALQELTRLAVQNKTGVFSR LILDVGGSRDARQVELGQLVDRAIERISAGSASASLAPMSSYERKLVHDIVAERGYTS KSEGEGRDRHTVITKA" misc_feature complement(3255882..3256046) /locus_tag="CMS_3111" /old_locus_tag="CMS3111" /inference="protein motif:HMMPfam:PF01424" /note="HMMPfam hit to PF01424, Single-stranded nucleic acid binding R3H, score 4.3e-13" gene complement(3256406..3257368) /gene="oxaA" /locus_tag="CMS_3112" /old_locus_tag="CMS3112" /db_xref="GeneID:6158582" CDS complement(3256406..3257368) /gene="oxaA" /locus_tag="CMS_3112" /old_locus_tag="CMS3112" /note="functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria" /codon_start=1 /transl_table=11 /product="putative inner membrane protein translocase component YidC" /protein_id="YP_001711734.1" /db_xref="GI:170783400" /db_xref="GeneID:6158582" /translation="MDFLGTILWPIKWVIELILVGFHTLWTTLGLDPDNGATWVLSIV GLVLVVRAALIPIFVRQIKNQRRMMEVVPQLKKIQDKYKGKRDQFSREAMSRETMALY KDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAVEELPGIGLLNEQLSRSFGESSFLGA PLQSAISTANGNITVIVIATTMVILMSASQFITQLQIMAKNMSEETKASPMFKQQRIL LYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQQFLVIRNMPTPGSEAARAREARLAR KGKLVAPEVSAESSTIVVEERKPAQRQQPVSKNRAKKQAGSKSR" misc_feature complement(3256589..3257254) /gene="oxaA" /locus_tag="CMS_3112" /old_locus_tag="CMS3112" /inference="protein motif:HMMPfam:PF02096" /note="HMMPfam hit to PF02096, 60 kDa inner membrane protein, score 4.3e-56" misc_feature complement(order(3256652..3256720,3256778..3256846, 3257192..3257260,3257288..3257356)) /gene="oxaA" /locus_tag="CMS_3112" /old_locus_tag="CMS3112" /note="4 probable transmembrane helices predicted for CMS3112 by TMHMM2.0 at aa 5-27, 37-59, 175-197 and 217-239" gene complement(3257379..3257690) /locus_tag="CMS_3113" /old_locus_tag="CMS3113" /db_xref="GeneID:6158846" CDS complement(3257379..3257690) /locus_tag="CMS_3113" /old_locus_tag="CMS3113" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001711735.1" /db_xref="GI:170783401" /db_xref="GeneID:6158846" /translation="MKRVLTSVVLAPRNAAIAVIGLYRRIVSPLYGDVCRYYPSCSAY GLEAVQEHGLIRGGGLAVWRVCRCHPWAEGGIDDVPARQVQQYRRTRYGFVVAPSHGK G" misc_feature complement(3257454..3257657) /locus_tag="CMS_3113" /old_locus_tag="CMS3113" /inference="protein motif:HMMPfam:PF01809" /note="HMMPfam hit to PF01809, Protein of unknown function DUF37, score 7.1e-33" gene complement(3257687..3258007) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /db_xref="GeneID:6158583" CDS complement(3257687..3258007) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /EC_number="3.1.26.5" /codon_start=1 /transl_table=11 /product="ribonuclease P protein component" /protein_id="YP_001711736.1" /db_xref="GI:170783402" /db_xref="GeneID:6158583" /translation="MTSGADYRTIVRRGRRTSTGTAVVSALAGPSDAPTRFGFIVSKK VGNAVTRNLVRRRLKAVTAGLLPTLCPGVSIVIRVLPGMERTAWDTLQEEIASAVTRA VRTL" sig_peptide complement(3257687..3257785) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /note="Signal peptide predicted for CMS3114 by SignalP 2.0 HMM (Signal peptide probability 0.701) with cleavage site probability 0.342 between residues 33 and 34" misc_feature complement(3257699..3258007) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /inference="protein motif:HMMPfam:PF00825" /note="HMMPfam hit to PF00825, Bacterial ribonuclease P protein, score 9.4e-14" misc_feature complement(3257762..3257830) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /note="1 probable transmembrane helix predicted for tmhmm2embl_unknown_003072_3257619_3257939 by TMHMM2.0 at aa 60-82" misc_feature complement(3257831..3257875) /gene="rnpA" /locus_tag="CMS_3114" /old_locus_tag="CMS3114" /note="PS00648 Bacterial ribonuclease P protein component signature." gene complement(3258032..3258169) /gene="rpmH" /locus_tag="CMS_3115" /old_locus_tag="CMS3115" /db_xref="GeneID:6158942" CDS complement(3258032..3258169) /gene="rpmH" /locus_tag="CMS_3115" /old_locus_tag="CMS3115" /note="in Escherichia coli transcription of this gene is enhanced by polyamines" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L34" /protein_id="YP_001711737.1" /db_xref="GI:170783403" /db_xref="GeneID:6158942" /translation="MSKRTFQPNNRKKAKKHGFRLRMRTRAGRAILAARRGKGRTELS A" misc_feature complement(3258035..3258166) /gene="rpmH" /locus_tag="CMS_3115" /old_locus_tag="CMS3115" /inference="protein motif:HMMPfam:PF00468" /note="HMMPfam hit to PF00468, Ribosomal protein L34,score 1.3e-20" misc_feature complement(3258104..3258163) /gene="rpmH" /locus_tag="CMS_3115" /old_locus_tag="CMS3115" /note="PS00784 Ribosomal protein L34 signature." ORIGIN 1 atgtccgacc gctccgaccc gacgcacgcg atctggcaga aggtgctcgc cgccctcacc 61 gcggacgacc gcatcacgcc gcagctgcac ggcttcatca gcctcgtgga gccgaaggga 121 gtgatgaccg gcaccctcta tctggaggtg cccaacgacc tcacccgcgg catgctcgag 181 cagcgcatcc gcgtgcccct gctcaacgcc atcggatcgc tcgacgaggc ggcaggcgtc 241 agcaacttcg ccatcgtggt gaaccccggg atcgcccagg acgccttcgc ccagcacccc 301 gagccggcgg agcagccgta catcgagacc ccgaccatca cggcgcccac cgacaacccg 361 ggcctgccgg cctcaccctc tcgcggtgac tcgcgcctca accccaagta cggcttcgac 421 accttcgtga tcggcggatc caaccggttc gcccacgccg ccgcagtcgc cgtcgccgag 481 gcaccggcca aggcgtacaa cccgctcttc atctacggtg actccggcct cggcaagacg 541 cacctcctgc acgccatcgg gcactacgcg atcagcctct accccggcat ccgcgtgcgg 601 tatgtgagct cggaggagtt caccaacgac ttcatcaact cgatcgcgaa caaccggtcg 661 tcgctgttcc agtcgcgcta ccgcgacaac gacatcctcc tgatcgacga catccagttc 721 ctccagggca aggactccac gcaggaggcc ttcttccaca ccttcaacac gctgcacgac 781 cacaacaagc aggtggtcat cacgagcgac ctgccgccga agcacctgac gggcttcgag 841 gaccgcatgc gctcgcgctt cgagtggggc ctcatcaccg atgtccaggc gccggacctc 901 gagacgcgca tcgcgatcct gcgcaagaag gcgcagagcg agaagctgca ggtcccggac 961 gacatcctcg agtacatggc caccaaggtc acctcgaaca tccgcgagct ggagggcacg 1021 ctcatccggg tcaccgcgtt cgcgagcctg aacaagacgc ccgtcgacct ggcgctcgtg 1081 cagacggtgt tgaaggacct gatcacgctg gacgaggaca acgtcatcgc gccggtcgac 1141 atcatcaacc acaccgccgc ctacttcaag ctcacggtcg acgacctgta cggctcctcc 1201 cgctcgcagg ctgtggccac cgcacgccag atcgccatgt acctgtgccg cgagctgacc 1261 aacctctcgc tgccgaagat cggccagctg ttcggcaacc gcgaccacac gacggtcatg 1321 tacgccaaca agaagatcac cgagctcatg aaggaacgcc gctccatcta caaccaggtg 1381 accgagctca ccagccggat caagcagaac caccgctacg gcaagatgtg acgccggcag 1441 cctgtgcgcc caccagcggc gcgcacagga gacgacgcag caggaggggt cggaccatga 1501 ggtccggccc cttctgcgtg cgtacgccga gccaggcccc gcacccaccc gaccctcgac 1561 gccgtcggtg ccctcctgaa cacggccgcg atgcgaggac agagtgcgtg agaggtcgga 1621 tccgctgttc cccacagtgt gcacagagtg tggataactg tggagaaccg ccggagtgga 1681 tgtgggttcg aggacccggc ctgtggaacc ggcctcgtcg cgtcgccgcc gttccgccga 1741 gtccccaggc cgctgcacac ccgtcccaca acttccagac gtgtagttcc cgctcgatca 1801 cggggacgcc gggagttgtc cacagattcc acagcggtta agactattga tccttaaacc 1861 cttcattgga tgtcgcccaa gaacctcagg gtgtggaggg atcgacggtc gtgggagccc 1921 ccgtcggcac ggctagcatt gaccgacaaa tcttccgctc atcgaggggt ccacaacgtg 1981 aagttccaag tcaacaggga cgtcttcagc gaggcggtgt ccttcgccgt caagctgctc 2041 ccgcagcgca cgaccctccc gatcttgagc ggcgtgctca tcgaggcgac cgaggacgga 2101 ctgacgctgt cgtcgttcga ctacgaggtc tcggcgcgca cgcagatcca ggccgacatc 2161 gaggagcccg gacgcgtgct ggtctcgggg cgtctgctcg ccgacatcgc gaaccgcctg 2221 ccgaacgccc ccgtgcgctt caccacggag gactcgaaga tcaccgtctc gtgcggatcc 2281 gcgcacttca cgctgctgag catgcccgtc gaggagtacc cgacgctccc gcagatctcg 2341 gagcagtccg ggctcctccc ggcagagcag ttcgccgccg cggtctcgca ggtcgccgtc 2401 gccgcctccc gggacgacgt gacgcccgtc atcaccggcg tgcagctcga ggtgggggag 2461 accagcctcg ggctgatcgc caccgaccgc taccgcgtgg ccgtgcgcga gatcgactgg 2521 gacggcggcg actccacgac ggacggcacc agccgcaccg ccctcgtgcc ggcccgcacg 2581 ctgcaggaga tcggcaagac cttcggccac agcggcacca tctccgtcgc gatcacggac 2641 accgacgacc gccagctcat cgcgttcagc gccgacaaga agaccgtgac gtccctgctg 2701 atccgcggca acttcccgcc ggtcaagcgg ctcttccccg agacggtcga caactacgcg 2761 gtcatcaaca cggccgacct catcgaggcg acccgccgcg tccagctcgt gctcgagcgc 2821 gaggccgccc tccgcttcac cttcacgatc gacgggctca ccctcgaggc catcggctcc 2881 gagcacgcgc aggcgtcgga gagcatcgac gccctcctga caggcgtcga caccgtggtg 2941 tcgttgaagc cccagttcct gctggacggc ctcggcgccg tccactccga gttcgtccgc 3001 ctctcgttca cgaagacgga caaccccaac aagcccggcc ccgtgctcat cacgagccag 3061 tcctccaagg accaggccgg cgctgacaac taccggtacc tgctgcagcc gaacctgctg 3121 ctgcgctaga tgtactgggt catgacgttg gtgacactcg ggccgcgggc gtgagcccgt 3181 ggctcgagtg gatccgttca gtgttgtagt gctcgatgaa ggggtcaagc gcgtcggcgc 3241 ggtgttggtt gctggtgaag ggttgccggt aggcccactc ggtcgcgagg gtccggttga 3301 agcgctcgac cttgccgttc tgccaggggc agtgcgggcg gatgaacttc tgccgcgcgc 3361 ccaggtcctg gacggcgttc ttgaacgcgg tcgagtgccg gtaggcgaac gcgttgtccg 3421 tgatgacccg ctcgatccgg gtgatcccgc gcccggcgaa gtacgccgct gcgcgggcca 3481 ggaacccggc cgcggtcgcg cctttctcat cgggatggat ctccgcgtag gcgagacggg 3541 tgtggtcatc gaccgcggca tggacgtaat cgaacccgat cccgcggccg cggacctgct 3601 cgctgcgccc gtggacccgc cagccgcctc cgtccgggat cctcccgagc ttcttcacgt 3661 ccacgtggat cagatcaccc ggatgctcgt gctcataccg gtgcgccgtt gaccgggatg 3721 cccggatcac ggccccggtg acggggtcca accatgccaa cggcggcgcc ccgtgccggc 3781 gcaggatccg ggagatcgta cgggatggaa cacctgtcac cggcgccagc cgcgcaggac 3841 ccgcccgcaa ctgggcccgc gcttccagca cggcccgttc ccgctccggg ctcgttcgcc 3901 tcggtactga ccggggccgc gatgaccgat ccgtcagccc tcgcagcccc tcggcacgga 3961 accggttcac ccatcgatgc gcgcactgcc gcgacacccc cagctcccgc gcgacgtgcg 4021 cgaccggccg acgatcctcc accacccgcc gcacgaggag aaccctcccg tgaaccgtca 4081 gacgagcatt accgtgggac atcgaggcct cctggcgatg gttgaactga acagctccat 4141 caagccagga ggcctcttca cacgccccga agtgtcacca acgtcacggc cgggtacagc 4201 tagaccgcga tcaaggagag aacatgcaca tcggactcgt cggactcggc aagatgggcg 4261 cccgcatgcg cgcgcgcctc gaggcgaacg gcatcgaggt gaccggatac gacaccaacc 4321 ccgacgtctc cgacgtggcc accctcgacg acctcgccgc cgcgctgccc accccccgcc 4381 tcgtctgggt catggtcccg gccggcaagg tcacgcagaa cgtggtgggc gacctcgcgc 4441 ggatcctgga gccgggcgac ctcgtgatcg acggcggcaa ctccaagttc accgacgact 4501 tcgcgcacgc gggactgctc aaggacaagg gcatcgactt cgtcgacgcc ggcgtctcgg 4561 gcggcgtctg gggcctcgag aacggctacg gcctcatggt cggcggaccc gtcgagcagg 4621 tccagcgcgc gatgcccgtc ttcgacgcgc tccgtcccga gggaccccgc gaggagggct 4681 tcgtccacgt cggcgactcc ggcgccgggc actacgcgaa gatggtccac aacggcatcg 4741 agtacgccat gatgcagtcg tttgccgagg gctatgagct cctcgcggcg cgcaaggaca 4801 tcatcaagga cgtcacgggc acgttcgagg catggcagcg cggcacggtc gtccgctcct 4861 ggctgctcga gctcctggtc aaggcgctca aggaggaccc gggcttcgag gacatcgagg 4921 gcttcgtgca ggactctggc gagggccgct ggaccatcga ggaggcgctt gacaacgccg 4981 tcccgatgcc cgccatcagc gcgtcgatct tcgcgcgctt ctcctcccgc caggaggact 5041 ccccggccat gaaggccgtc gcggcgctgc gcaaccagtt cggcggccac tcggtgcaga 5101 agaagtcctg accaccggat gatcgtccgt cacctctccc tgggtgactt ccgcaactac 5161 acccgcgcgg acgtcgcgct cctgcccggt gccaccctct tcgtggggag caacgggcag 5221 ggcaagacga acctggtgga ggcgctgggc ttcctgagca cgctcgggtc gcaccgcgtc 5281 tccaccgatc aggcgctcgt ccggcagggc gcggagtccg cggtgatccg ggcgctgctc 5341 cagcacgcgg ggcgcgagct ccgggtcgag gtgcagatca accgctcggc cgcgaaccgg 5401 gcgcaggtga acggcacggc gaccaagacg cgcgaactgc cgcggtactt ctcgagcgtg 5461 ctgttcgccc ccgaggacct ggcgctcgtg cgcggcgatc cgtcgggtcg gcgccggctg 5521 ctcgaccagc tgctcgtgct gcgcacgcct cggctcgccg gggtcctgtc ggactacgac 5581 cgggcgttga agcagcgcaa caccttgctc aagtcggcgc gtgcacgcgg gatgaaggcc 5641 gaccagttga gcacgctcga catctgggac gagcgcctcg tcgcgatcgg ctcgcagatc 5701 atcgcggcgc gcggtgcgct ggtggagtcc ctccagccgg agctggcgcg cgcgtacctg 5761 gctgttgcgg gatccgacca cggcccgtcg gcgcgaccgg agttgagcat cctcgcggac 5821 gacccggggg aggacgacgt cgcggacgag accggggcac gcgatggagg gcgcttcacg 5881 cggaccgaag acgtcgttcc cgtcttcacc gccgccatcg cgcggatgcg accccgagag 5941 ctcgagcggg ggctgaccct ggtgggcccg caccgcgacg atgtgctctt ccggctcaac 6001 gggttaccgg cgaagggcta cgccagccac ggtgagtcgt ggtcgttcgc tctcgcgatc 6061 aagctggcgt cggcggagct gctgcggcgc gactcgcaga cgggggaccc cgtgctgatc 6121 ctggacgacg tcttcgcgga gctggaccag gccaggcgcg ggcggctcgc ggaggccgtc 6181 accgggttcg agcaggtgct catcaccgcc gccgtgttcg aggacgtgcc cgagcacctg 6241 gcggccaacg ccgtgcacat ccgggccggc gcgatcgtcg agtcgccgac gccggcctcg 6301 gcctccgagc cggcgtcgcc cggcgaggac gggggagcgg cgtgatcccc cgcgcacccg 6361 acggcggtcc gatgcccgag tcggaggcgg tggccgtcta ccgccggttc cgccgcgtgt 6421 tcggcgacgc gtccgtgcgt tctccctccg cgcggaagcg ccgtgagcag aaggcgggca 6481 gctcgccgtt ccagcccggg cgggatcccg actccctggg gaacgtgatg gactcgctca 6541 cctcgcggat gggctggacg tcctccctct cgcaggccga gctcatggcg gcatggacga 6601 ccatcgccgg cgaggagacg gccgtgcact cgtcccccgt cggcatcgag gacggcctcc 6661 tgacggtcga gtgcgagtcg acggcgtggg cgacgcagct ccggctcatg cgcgtggaga 6721 tcacgacgcg gatcgccgag cgcttccccg acgcgggcat ccggtcgatc cgcttccagg 6781 ggccgaacgc cccgtcctgg aaaaagggtc ccaggtcgat cccagggcgg ggcccgcgcg 6841 atacctacgg ctagggaggc gaatcaaggt cacccccgtc gcgaaagcgc cgcagcgggc 6901 cggataggag gtgcggagct tactactgcg atagaatgag gggtcgcccg cagtccaggg 6961 acgacggtcg gcggatcacc tcgtgatcgg cgcgcgaccg ccgtcgggca ggggcgcgtc 7021 gacgcggcag gagccaccac ttcatgacat cggatgccac acaggacctc cccgacgact 7081 ccacccccga cgaggtggag gtcgaggaga cgcacaacga ctccgaccac atcacccgcc 7141 agcaggtgag caacgactac ggcgccaacg agatccaggt gctcgagggc ctcgaggccg 7201 tgcgcaagcg ccccggcatg tacatcggat ccaccggacc ccgaggactg caccacctgg 7261 tgagcgagat cgtcgacaac tccgtcgacg aggccctcgc cgggttcgcc agcgacatcc 7321 agatcacgat gcgcaaggac ggcggcatcc gcgtcgtcga cgacggccgc ggcatcccgg 7381 tcgacatcca cccggtcgag ggcatctcca cggtcgagct cgtgctcacc aagctgcacg 7441 ccggcggcaa gttcggcggc ggcggatacg cggtgtcggg tggcctgcac ggcgtcggca 7501 gctccgtggt gaacgcgctg tcggagcgcc tcgacgtcga ggtccgccgc cagggtgcgg 7561 tctggcgcca gagcttcacc atcggcgtgc cggacgcacc cctggagaag ggcgagggat 7621 ccaccgagac cggcacgacc atcaccttct ggcccagccg cgagatcttc gagaccgtcg 7681 agttcgacta cgacaccctg cgcgcgcgct tccagcagat ggcgttcctt aacaagggcc 7741 tcgccctcac gctgcacgat gagcgcgagg aggacggcgc cgagcaccgc accgagaagt 7801 tcctgtacga gcggggcctc gtcgactacg tcgagcacct cgtgaaggcg aagaagaccg 7861 aggtcgtcaa cgccgacgtc atcgccttcg agtccgagga cacggtcaag aagatcagcc 7921 tcgaggtcgc gatgcagtgg accacctcct acacggagag cgtccacacg tacgcgaaca 7981 ccatcaacac gcacgagggc ggcacgcacg aggaggggtt ccgcgcggcg ctcaccacgc 8041 tcgtcaaccg ctatgcgcgc gagaacaagc tgctgcgtga gaaggacgag aacctcaccg 8101 gcgacgatgt ccgcgagggc ctcaccgccg tgatctccgt gaagctcggc gagccgcagt 8161 tcgagggcca gacgaagacg aagctcggca acaccgaggc caaggcctac gtgcagcgca 8221 tcgtcggaca gcagctgggc gactggctcg agaagaaccc ctcgcaggcg aaggacatca 8281 tccgcaaggg gatgcaggcc tcgcaggcgc gtctcgccgc ccgcaaggcg cgcgagcaga 8341 cccggcgcaa ggggctgctc gagtcgggcg gcatgcccgg caagctcaag gactgccaga 8401 gcaaggaccc ggcgttcagc gaggtgttcc tcgtcgaggg cgactccgcc ggcggatccg 8461 cggtgcaggg ccgcaacccc acgacgcagg cgatcctgcc gctgcggggc aagatactca 8521 acgtcgagaa ggcccgcctc gaccgcgcgc tgcagaacaa cgaggtccag tcgatgatca 8581 ccgcgttcgg cgcgggcatc ggcgaggact tcaacgccga gaaggtcagg taccacaaga 8641 tcgtgctgat ggccgacgcc gacgtcgacg gccagcacat cacgaccctg ctgctcaccc 8701 tgctgttccg ctacatgcgg ccgctcatcg agctcggcta cgtgtacctc gcgcagccgc 8761 cgctgtaccg gctcaagtgg tcgaacgcgg aggaccagta cgtgtacacg gacgcggagc 8821 gcgacgccct gctgatccac gggcagcaga acggcaagaa gctgccgaag gacaacggca 8881 tccagcgcta caagggcctc ggcgagatgg actacaagga gctgtgggag accaccatgg 8941 atcccgccac gcgcacgctc atgcaggtga ccctcgacga cgcggcgggc gccgacgagg 9001 tgttctcgac gctcatgggc gaggacgtcg agtcccgcag gagcttcatc cagcgcaacg 9061 ccaaggacgt caggttcctc gacatctgat cgaccgggcg gcggctcggc cccacgctga 9121 ccgccgcccc atgccgaccc cacgatccac cgacctctga acgggacctc catggccgac 9181 gacaacactc cggacgacga gcagggcacg ggcgcgaccc cggatgacga cgcgctgccg 9241 caggagggcg tgatgccggc gtccgccgcc gcctccgact cgctgcccgc cgcgatcgtc 9301 gatcccgatg cgcgcgtcgt cgtcacgcac gaccgcatcg agcaggtcga cctccagctc 9361 gagatgcagc gctcgttcct cgactacgcg atgagcgtca tcgtccagcg cgcgcttccc 9421 gaggtgcgcg acggcctcaa gcccgtgcac cgccgcgtga tctacgcgat gtacgacggc 9481 ggctaccgcc ccgaccgctc cttcttcaag tcggcccgcg tggtcggcga ggtcatgggc 9541 cagttccacc cgcacggcga ctcctccatc tacgacgcgc tcgtacgcct ggtgcagccg 9601 tggagcctgc gctacccgct cgcgctcggc cagggcaact tcggctccgc cggcaacgac 9661 ggcgccgccg ccccgcggta caccgagacc aagatggccc cgctcgccat ggagatggtc 9721 cgggacatca ccgaggacac ggtcgacttc caggacaact acgacggccg cacgctcgag 9781 ccgaagatcc tgccgtcgcg cttccccaac ctgctggtga acggatccgt gggcatcgcg 9841 gtcggcatgg ccaccaacat cccgccgcac aacctccgcg aggtggcggc gggtgcccag 9901 tggctgctcg cgcaccccga cgcgaaccgg gaggagctcc tcgaggcgct gctcgagcgc 9961 atcaaaggac ccgacttccc gacgggcgcg caggtgctcg gcaccaaggg tatcctcgag 10021 gcgtaccgca ccggccgcgg atccatcacg atgcgcgcgg tcgtcgcggt cgaggagatt 10081 cagggccgcg tgtgcctcgt ggtcacggag ctcccgtacc aggtgaaccc cgacaacctc 10141 gcgatcaaga tcgccgagct cgtcaaggac ggcaagctcg ccggcgtcgc cgacatccgc 10201 gacgagacct cgggccgcac cggccagcgc ctcgtcatcg tgctgaagcg cgacgcggtc 10261 gcgaaggtcg tgctgaacaa cctctacaag cacacgcagc tgcaggagaa cttcggcgcc 10321 aacatgctgg cgatcgtcga cgggatcccg cgcacgctcg cgctcgacgg cttcatctcc 10381 gcctgggtcg accaccagat cgacgtcatc gtccgacgca cgcagtaccg gctcaacgag 10441 gccgaggcac gcgcccacat cctgcgcggc tacctcaagg cgctcgacgc gctcgacgac 10501 gtcatcgccc tcatccgccg gtcggagacc gtcgaggtcg cccgcagcgg cctcatgaag 10561 ctcctcgaca tcgacgagct gcaggccaac gccatcctcg agatgcagct gcgccggctg 10621 gccgcgctcg aacgccagaa gatccaggac caggcggccg agctcgagca gcgcatcgcc 10681 gagtacaagc acatcctggc gacgcccacc gtgcagcgcg agatcatcag caccgagctg 10741 caggagatca ccgacaagta cggcgacgac cggcgcacgg agatcatgct cggcttcgac 10801 ggcgacatga gcatggagga cctcatcccc gaggaggaga tggtggtcac ggtcacgcgc 10861 ggcgggtaca tcaagcgcac gcgcatcgac aactaccgca gccagcaccg cggcggcaag 10921 ggcgtgcggg gcgcccagct ccgggcggac gacgtggtcg agcacttctt cgtcaccacg 10981 acgcaccact ggctcctctt cctcacggac aaggggcgcg tgtaccgcgc caaggcatac 11041 gagctgcagg aggccggccg cgacgccaag ggccagcacg tcgcgaacct gctcgccatg 11101 cagccggatg aggagatcca gcaggtcctc gacatccgcg actaccaggt ggcccagtac 11161 ctcgtgctcg ccacccgcga cggcctgatg aagaagacgg cgctcacgga gtacgacacg 11221 aaccgcacgg gcggcatcat cgcgatcaac ctccgcgacg gcgacgcgct cgtctcggcg 11281 ctgctggtgg acgaggacga cgatctgctc ctcgtgtcgc gcaagggcat gtcgctgcgg 11341 ttctcggccg acaaccaggc gctgcgtccc atgggccggt cgacctccgg tgtgaagggc 11401 atgacgttcc gcggggacga cacgctgctc agcgcatccg tcgtgggcga gcagggctac 11461 gtgttcgtcg tgaccgaggg cggcttcgcg aagcgcaccg ccgcggacca gtaccgcgtg 11521 cagaaccggg gcggcatggg catcaaggtc gccaagctgc aggatgcccg aggcgatctc 11581 gcgggggccc tcatcgtcgg cgaggaggac gagatcctcg tcgtgctcgc cagcggcaag 11641 gtggtacggt ctgtcgtggc cgaggtcccg gcgaagggcc gcgacaccat gggtgtcgtg 11701 ttcgcccggt tcgcggacga cgacaggatc atctccctgg ccaagaactc cgaacgcaac 11761 ctggtggtcc ccgaagctgc gcccgacgcg tccgacggta ccgctgctgg aaagggaaca 11821 cccgatgagt agtgtcgccg agaagctcgc gaagaagtcg tcgcgagcca ccaccaccaa 11881 gcaggtgcgt ctcaagctcg tgtacgtcga cttctggtcg gcgctgaagc tcgcgttcct 11941 cttctccgtg gtgctcggca tcatcaccgt cgtggcgacg ttcctcatct acgtcgtcct 12001 gcagaccacg aacgtgttcg gcacggtcga ccagctgttc caggaggtct ccggatccgc 12061 ggacttctcc ctgcaggacg tcttcggcct gggacaggtg ctcgggttcg ccatcgtggt 12121 ggccgtcctc aacatcgtcg tcggcaccgt gcttggcgcc gtggccgcgc tgctgtacaa 12181 cctcagcgtg cgcatcacgg gtggcgtcct cgtcggcttc accaacgcgt agccgattgg 12241 gagaaacggg caggcgtacg gtaacgtgta cctgcccgat ggggatatag ctcagttggt 12301 tagagcgctt cactgataat gaagaggtcc caggttcaaa tcctggtatc cccaccaaca 12361 cccccggatc cgcatgatcc gggggcaagg cgggaaacga gccggtagat cgtcaagcgg 12421 tccgaggctc gccaatcggg gtcatagctc aattggtaga gcgcctgctt tgcaagcagg 12481 aggtccgggg ttcgattccc cgtgactcca catcacaccc gacaccgggt cacgctccag 12541 ctggggccct gcttccactg gctcgtcgcc gcggacagcc gttcatccga gggtcgtatc 12601 gcggcgtcgc cggaacgacg aaggcccggg cacctttcgg tggccgggcc ttcgtcggat 12661 cccgagggat cgaggagcgg tgatcagctc gcgggctggt ccttcgcggt cgcgtcgacg 12721 gcctcgggct cgtcgtcggc gatccacagg tcgtcgtccg cgcggaacgt ctggtacagc 12781 gcatagccga cgccgccgac cacgacgacg ccgagcgcga tgagggcgac gccgccgaag 12841 ccgaggccct tcttcgcggg agccacctgc gggacgtagc ggcccacata ggagcggccg 12901 ttgtcgacgt agtgcttgcc gaactcctgc gccttcgagg agaccttgcc ggccttcttg 12961 accgcgtcct gcacctgctt gctgttgcgg atgccctcgg tcgcggcgac cgcggatccg 13021 gcggcaccgg cgacggccgg caggacggtg tgcgtgaagc ccttgtaggc cgagtcggcc 13081 gcggcgcgga cgcgctcggc gccggcctcg tagctgggac ggatgtggtc gtcgacgccg 13141 cgcttgacgg cggggacgac gtgctggtcg gagagcttgc gggcggtgtg tgcggcctcg 13201 gccacgacga cgttggcccg gtcgaggacc tcgcgctgct ccttgaggac ggcggccgcg 13261 tgggtgcgga gcttcgccaa ctccttcttg ttcttgcgtg acagacccaa ggggacctcc 13321 atcggtgtga tttcgccagg aatcccagtc tggcacgggt gcctccgcgg gcaaacacga 13381 cggagcctgt gcgtccgccg agtcccagct ccgccgtgag accattgccc catgtctgcg 13441 cacactcacg tcgccaccat gacgaccaac cacggcacca tcgtcctcaa tctcttcggg 13501 tcccacgcgc cccagaccgt cgagaacttc gtcggcctca ccacgggcga gaaggagtgg 13561 acccaccccc agaccggcaa gaagtcgacc gaccctctct acgacggcgt cgtcttccac 13621 cgcatcatca aggacttcat gctccagggc ggcgacccgc tcgggcaggg caccggcggt 13681 cccggttacc agttcgacga cgagatcagc cgcgacctcg acttcagcaa gccctacatc 13741 ctcgccatgg cgaacgccgg cacgcagggc ggccgcggca cgaacggctc gcagttcttc 13801 atcacgacgg cgcccaccac gtggctccag ggcaagcaca cgatcttcgg cgaggtcgcc 13861 gacgacgcgt ccaagaaggt cgtcgacgcg ctcaacgcgg tcccgaccga cggccgcgac 13921 cgtccccgcg aggacgtcgt gatcgagagc gtcaccgtcg agaaggtctg atgaccgact 13981 caccccgtac ggcggccgac cgctgctacc ggcaccccga ccggcagagc ttcgtgctgt 14041 gccagcgatg cgggcggacc atctgccccg agtgccagac gccggccgcc gtcggggtga 14101 tctgccccga ggacatgaag gagcagcgcc gcaccgctcc tcgctcccgg gcatccttcg 14161 tcacgcggat gacgcggagc tccgcgcccg tggtgacgta cgggatcatg gccgtctgcg 14221 ccgtggtctg gatcctgcag gtgctgcccg tcgtcggcga ctacgtgacc acgtcgctgt 14281 ggttcgcgcc tgtctacggc agcgtcgcct ccggtgacta cgagccgtgg cggatgctca 14341 cgagcgcgtt cacgcactcg ccgtcgagca tccttcacat cgtcttcaac atgctgtcgg 14401 tcttcgtctt cggccgcgtc ctcgagccca tgctcggacg cgcccgcttc ctcgccctct 14461 tcctcatctc ggcgctcggc ggttccctcg ccgtcgaggt catcggctcc gccatgggcg 14521 agccgctgca ggccgtggtc ggcgcatccg gcgcgatctt cgggctcatg ggcggctact 14581 tcgtgctcgc ccgcaagctg ggcggcaacg tgggccctct cctcggcatc atcgcgatca 14641 acctgttgct cggcttcgtc gtgcagggcg tctcctggca ggcccacgtc ggcggcctgg 14701 tgacgggagc gctcgtggcg atcgtgctcc tgcgcacgcg ggacgcccgc cagcgcggcg 14761 cgcagatcgg ctccctggcg ggcctcaccg tcgcgatcct gatcgcgggc gccgtcttcc 14821 ccgtcggcct ctgaccggcc cgttcgtacc tctgccgcct cacgcgagcg gccttctcgg 14881 cgtgccctcg cgccgcgcat ccgcgtacct gcgcggcgga gcctagttat ccacaggcca 14941 gtccacagtg gggatagtta cacgcgtgtg attagcggcc gagcgggagg gggtccggag 15001 gagcctggac ggagtcggcg tccggaagat cccgacaccc atgcgcttcc gcgggtaacc 15061 cgcgctgacg gtgcgcggcg gggcacgggc cttccgcgtt ctccacaggt gtggagcgtt 15121 gtgcacaggg tgtctgtgga caacgcctgg cgcgcgcgtg cgcgctgccg ggaagcagaa 15181 gagcccgtca ccagcggatg gtgacgggct ctcgtgattg cgctgcggtc agcgccacct 15241 ggtggtcatg aggaagccga ccaggatgag gccgaagccg atgaggatgt tgccgacgcc 15301 gaggtcgggg atggggaacg cgttgaggct cacgtagtac acgatgagcc acgcgagccc 15361 gacgagcatg aagccgaaca tgatgggctt gaaccacacg gggttcgggg cgtcctcgtc 15421 gtgcacgcgt tcctggcggg agggtctcgt cgtcttgtcg cgggccatgc ggcgattcta 15481 gccgtaccct cctccaccgg gccgggagga tgcccggctc cacgggccgc ccctggcggc 15541 gtcccgccca tgtgcgccgc ctacaatcgg cacatgagcg ctcaggaccc cgccccctcc 15601 cgccgcgcga cgcggcgccg cggcaggcgg ggcgatgcgc tcctcggcac gatcggcgtg 15661 ctcggcgagc tgctcctcac ggccggcgtg ctcatcatgc tgttcctcgg atggcagctc 15721 tggttcaacg acatcgtggt cagcagcggc cagcgcgacc aggcgctgga gaacagccgg 15781 agctgggcca cggccgcgcc ggacgcggcg gcctcccccg acccggcggc gtcgcctgca 15841 gcgccgggtg accccgtcat cacgaccgcc ccctcgtcgg atgccaccga cttcggcaac 15901 atctacatcc cgcggttcgg ctccgactac gtggtgccgg tcgccaccgg ggtgggcctc 15961 ggcaacgtgc tcaacctcgg caagatcggg cactaccgcg agacgcagat gcccggccag 16021 gtgggcaact tcgcggtcgc cgcccaccgc acgacgtacg gcaagccgtt caaccagatc 16081 accgacctgc gtgtcgggga tgccatcgtc gtggagacgc aggacggctg gtacacctac 16141 cgcttccgta cactcgagta tgtgaagccc accggagtcg acgtgctcga cgaggtgccg 16201 caggcaccgg acgcccagcc cggggaccgc atcctgacga tgacgagctg caacccgctc 16261 ttctccgccg ccgagcgcgt ggtcgcgtac agcgtcttcg agtcctggca gccccggtcg 16321 gatgcgtcga cgcccgccgc gctggccggc acgtcgttcg cgaaggcggg ctgagcgtgt 16381 acgcggcgtt ctggcgcatc ctgcccggcc cggtgtggat ccggctcctc atcgtcctcg 16441 tgctgctcgc ggccgtcctc ttctccctcg tgacctgggt cttcccctgg gtcgactcca 16501 tcgtcaacac ccaggaagtc acggtgcatc agtgacacgc gtcctcgtca tcgacaacta 16561 cgacagcttt gtttacacgc tcaacgggta cctgcagcag ctgggtgccg agaccgtggt 16621 catgcgcaac gacgaccacg cggaggccga catggctggc gtcatctcgg agtacgacgc 16681 cgtgctcgtg tcccccgggc cgggcaagcc ttccgaggcc ggggtctcca tccccacggt 16741 gacggcggcc ctcgcatccg gcacgccgct gctcggggtc tgcctcgggc accaggcgat 16801 cgcggaggcc ttcggcgcca cggtcaccaa cgccgaggag ctcatgcacg gcaagacgtc 16861 gctcgtcacg cacgacgacg gggacttcta cctgggcgtg ccgcagccgt tcacggccac 16921 gcggtaccac tcgctggccg tcgtcgacgg gaccgtgccg tccgacctgg tggtcacgtc 16981 ccgcaccgag ggcggggtca tcatgggcct gcgtcacgag tccgcgccca tcgtcggcgt 17041 gcagttccac ccggagtcgg tgctcaccga gggcggctac cgcatgctcg gcaactggct 17101 cgaaggggcc gggctcaccg gcgcccgcga cacgtcctcg cgactgtcgc cgctcgtccg 17161 cgtggcctga cgggccccga cgggagtcac cggccggcag ctggagtcga cccgtcgtcc 17221 gacgggcgct gctcgatcga ggaccggtgg cgccgcgtgc ggatcagccg cgcgcggggt 17281 ccggggtcgg cgtgcccgtg gtgggcgccg acgtgctgcg caccgcgccc gtgcagtagg 17341 tgaggccgac cgtcgagcgc tgggcgacgt cccccggcgg cacggactgc tggctcaccg 17401 gggatccgtc ggcgcggctg cacgaggggt cgcgccgggt ggtcacgacc agatccgatg 17461 cctcgagcag cttctgcgca tccacgagcg gctggccgag cacgtcgggc agtacgacct 17521 tgccgttgga caggatgagc ttgacggcgg agccctggtc gacctgctgg gaggacgccg 17581 gatccgtctg catgaccagt ccgtcaggga cggtcggcga ggactggcgg atgacctcgc 17641 ccaccttcag gccgaccgcc tccaggttgg cggtcgcggt gccctcgtcc aggttcatga 17701 ggttcgggac ctggacctcc ggcgggccgg aggagacgaa cacgtcgatc tcggtcttgg 17761 cggcgacgtt ctcaccggga tccgggttgg tgcgcaacac gatgccctcg gcgaccgatg 17821 tgctggcctc ctcgcgttcg agggggacca ggtcggcctc ctcgagggcc gcggctgcgc 17881 tggagtaggt ggagcccgcg acatcgggga ctgtggggct gatgtcgggc ggcgcgatgc 17941 tgctgaggct ggtgacccag atgacgacgg cgatgaggat cacgacgacc acggtgacgc 18001 cggcccagat ccacggcacc ggcggacggc tctgggtgcg gacggtgcgg tcgtcgtcga 18061 cgccgagctg gcgtagagcc tgctgcgagg aggaggggcc ggcgggggcg ccgaagagcg 18121 tggctcccac gtcgttggtg ggcgcctcgc ggggggcaag ggtgccggcg gcggcgcgat 18181 cgaggtcggt gcggaagtcg cccgccgtct ggaagcgcgc gtagcggtcc ttcgccatgg 18241 cgtgcaggac gacctggtcg agctgcaggg agacggcctc ctgcacggtg ctcggggcga 18301 cgggcgtctc gctgacgtgc tggtaggcga cggcgaccgc ggtgtcggcg cggaacggcg 18361 cctggccggt gagcatctcg aagaggacga cgccggcgga gtagaggtcg gtgcgcgcgt 18421 ccaccgactc gcccttggcc tgctcggggg agaagtagcg cgcggtgccg aggatggcgg 18481 tggtctgcgc gatggtggcc gaggtgtcgg acacggcgcg cgcgatgccg aagtccatga 18541 ccttcacctg gccggcgggc gtgaccatga tgttgcccgg cttgatgtcg cggtggacga 18601 cgcccgcgcg gtgcgagtac tcgagggcgg tgagcacctg gcccatgatg cggacggcct 18661 cgtccgggtc gagcgggccg tccgtgatga cgtccttgag gaggcggccc tcgacgcgct 18721 ccatgacgat gaagggggtc gtgtgcgatg cgccgtcctg gtcggtgacg acgtcctcgc 18781 ccgcgtcgaa gacgcgcacg atcgtggggt gcgacatgcg cgcggccgcc tgggcctcct 18841 ggcggaatcg gctgcggaag gccggatcct cggccaggcc gcggcggagc accttgacgg 18901 cgacgcggcg accgagacgg gagtcgacgc cctcgaagac gtcggccatg cccccgcgac 18961 ccagcagcgc cccgacctcg tagcggccgc ccagcacacg ggtgtcggtc acggactgcc 19021 tctcgtcggg atcgggattc ggacggagac gagcttaccg ggggtccgct ggggatccgg 19081 gcggcttcgc caccccgcgc gcgagctcgg tcgatccgcc gtcgccggcc gcccgggcaa 19141 cgtcggtcag gggttccggt gcgagctcga gacgagcgag cgctcgtccg tgcgacccgg 19201 tgcgggcgtc ggggccatgc cggtcgtgcc gccgttgccg ccgccggtcc ccccaccggt 19261 gccgccgccc gtgccctcgc cgctgccgcc cggtgcggcc tcgacggtga ccgtgacggt 19321 gctgctgtac ggcgactcgt tcgtgccgca gatggcgagg tacttgacgg tgaacgtgcc 19381 cgggttggtg ccgaccttga tctcgcccga cgtggtctgc gcgttcgtcg ggttcgtgct 19441 gccgccccag gtgccgctgg cgccctgcga gacggagtcc gcctggacct ggtacccgtt 19501 gagcgtctgg ccggcggggc aggagtacgc gggccaggag atgtccaccg tctggccggc 19561 gcgcacgtcc gtcggggtga cggtcggcgt gccgggcgcc gcggtgggca gcgtgggcgg 19621 cccgtacgcc gtgatctgga tggtcgcgcc cttcgcgacg ctgccggtgg gggtgatggc 19681 cgtgacgcgg ccctcctggt cgccggacgg cgcggcgctg cccgtgacga cggtgacctt 19741 gaggccgagg gcggtgagct cccctgtgac cgtcttctgg tcgcggccga tgtagtcgtc 19801 gcggttcacg tccaccgtgc tcgcggtggg cgagggggtg ggggtcggcg agggtgacgc 19861 gctcgggctc ggcgaggcgc tcgtctcggt ggccgcaggg gtcggggcgt cggcgtcgcg 19921 gctgccgaag tacgcgagca ggccggccac gatggcggcg accacgagga tcgcgacgac 19981 gacgaagatc cagatggcgc gcttgcgggc tcgcggctcc tcgggctcct cgtcgtccgg 20041 gtcgtcgagg aggaagggat ccgccgcacc ggcgcgcggc gcggaggacg agaggaccgt 20101 ggtcgcgccc gtgtcggcgg cgcggcggcc ggacggcatg agctgcgtgg cctgcgtggg 20161 cgtgcccggg tcggccagag cagcggcgcc cgcgacggcc gcgaccgcga tggtggcggt 20221 ggcgacgtcg ccgcgacgga gcgcctgggc ggcgcgcgcg aggtgcgcgg cgctctgcgg 20281 gcggtcggcc ggcttcttgg cgatgcacga catgacgagg ttgcgcacgg gctcggcgac 20341 ggtgaccggc agctcgggcg gctgctcgtt gatctgcgcc atggcgatgg cgacctgcga 20401 ctcgcccgtg aaggggcggc gtccggccag gcactcgtac gcgacgatgc ccatcgagta 20461 gacgtcggtg gacggcgacg ccgggtgccc gctcgcctgc tcgggggaga ggtactgcac 20521 ggtgcccatg acctggccgg tggcggtgag cggcacctgg tcggcgatgc gcgcgatgcc 20581 gaagtcggtg atcttcacgc ggccgtcggg cgtgatgagc aggttgcccg gcttgatgtc 20641 gcggtggacg agcccggcct ggtgcgcggc gtggagcgcc agggcggtct gggagatgat 20701 gtcgagcacc ttgtcggtgg agagcacccg ctcgcgctcg aggatggtgg agagcgcctc 20761 gccgggcacg agctccatca cgaggaaggc gctgccgtcc tcctcgccgt agtcgaagac 20821 gttggcgatg ccctcgtggt tgacgagcgc ggcgtggcgg gcctcggcgc ggaagcgctc 20881 gaggaacccg gggtcgccga ggtactcgtc cttgaggatc ttgatggcga ccttgcgtcc 20941 gatgacgagg tcggtggcct cccacacctc gcccatgccg ccgatggcga tgcgatcgcc 21001 cagctggtaa cgccctccga aggtcagtcc gctcgtgggt ctcatctgtc cagcaccgcc 21061 tcaatcactt tcttcgccac gggggcggcg agggtgttcc ccgagcccga tcgtcctcgt 21121 ccgccgccgt cctcgaccag gaccgcgacc gccaccttcg gcgcatccgc cggcgcgaag 21181 ccggtgaacc acagcgtgta cgggtcgtcg gagccgttct gggcggtgcc cgtcttgccg 21241 gccacgtcga cgccactgat tctcgcattc gacgcgacgc cggtctggac gtcgtcgatc 21301 atcatccggg tcatggtggc ggcggtctcc ttcgagatcg ggtcggcgaa tcggctgggg 21361 gagaagccgg agagctcgct caggtcgggg ttgagcacgc tgtcgacgac gctgggcttc 21421 atgacctcgc cgccgttcgc gatcccggcc gtgaccatgg cggtctgcag cggggtcgcg 21481 cgcacgtcga gctggccgaa cgcggactgc gcggtctggg cgtcgtcgag gtcgggggag 21541 aagacgctct tggcgctggc cagggggacg tcgatcgact tcccgtagcc gaacgcgtcg 21601 gccatcgccg cgatcttctc ggagccgagc gcgatgccga gctgcgcgaa cgggatgttg 21661 cagctgaggc gcaacgcggt cgcgatgctg acctcggcct cggggccgca ggcgccctcg 21721 ccggcgttgg tgatgaccgt gccggtgccg ggcagcgtga acgtcggcgg gttgggcagc 21781 agcgagtcgg gcgtgtactg gccggactcg atggcggcgg ccgcggtgat gagcttgaac 21841 gtggatccgg gcgggttgag gctgttgacg gcccggttga tgagggggtt cgacgggtcc 21901 gcaaggagcg acgagtagct ctgctgcacg gccgcgcggt cgtgcgacgc cagcgtgttc 21961 gggtcgtagc cgggcttgga gaccatcgcg aggatgcggc cggtcttcgg ctcgatcgcg 22021 accacggagc cctgcagcga cccgagcgcg tcgtacgccg cctgctgcac cttcgggtcg 22081 atcgtgagct cgaccgacgc gcccttcggg tcctgcccgg tgaaggtgcg cgtgaggctg 22141 tcgaagaact gcgtgccgct cgtgccgctg agcacgtcgt tcatggagtc ctcgagcccg 22201 gtggatccct ggccgagcgt gtagtagccc gtgaccgcgc tgtagaggtc gggctgcgcg 22261 tacgtgcgga ggaacttgta gcggtcgtcg accgggacgg acgaggcgat gggcgtgccg 22321 tccacgagga tcgagccgcg ctccgcggag tagctcgcga tgatggtgcg gctgttgcgc 22381 ggatccgcct gcagcgtggg cgcggagacg acctggatga ccgacgccgc gacgaacagg 22441 gccacgaaca tggccaggac gaacacggag acgcgcttga gctcgcggtt cacgactcga 22501 ccaccaatcg gggctggttg cggacggtgt cggagaggcg gaggagcagg gccgcgatga 22561 tccagttggc caggagcgat gatccgcccg ccgccatgaa cggcgtggtg aggccggtga 22621 gcgggatgac gcgggtgacg ccgccgatga cgatgaagac ctggagcgcg atgacgaacg 22681 acaggccgat gccgagcagc ttgccgaagt cgtcctgccc ggcgaagccg atgcggaagc 22741 cgcgggagac gagcaggagg tagagggcga ggatcgcgaa gacgccggtg aggccgagct 22801 cctcgccgag gctcgcgagg atgaagtcgc tgttggcgag cggcgtgagg ttgggcatgc 22861 cctcgccgag gccgcggccg aacagacccc cgtcggccat gccgaacagg cccgtcacga 22921 gctggtagct gccgccgttc gcgtcgtaca cggcggggtc gaagggcttc agccaggcgt 22981 cgacgcggcc gccgacgtag ccgagggtgc tcgcgccgta cgcgccgccg aggaagagga 23041 ccagtccgag gacgacccag ccgatgcggc ccgtgctgac gtaggtcatg acgatgaaga 23101 ggccgaagta gagcagcgac gtgccgaggt cgcgctggaa gacgaggacg ctcatcgaca 23161 cggcccagac caggaggatc gggccgaggt cgcggacgcg cgggaagcgc atcccgagca 23221 ccttgacgcc gaccatggac aggctgtcgc gcgcggtgac gaggtacccg gcgaagaaga 23281 ccgccaggca gatcttggcg atctcgccgg gctggaacga gaagccgccg atgtggatcc 23341 agacgcgggc gccgttgatg ttctggccga ggaccgggag catcggcagc agcagcagga 23401 tgaggccgac gaacatggcg atgtagcggt agcgctgcag cacgcggtgg ttcttcagca 23461 gcacgatgac cgcgagcgcg cacacgatgg cgaggcccga ccagacgatc tgccgcacgg 23521 ccacgctgtc ccagccggac aggccggcgg cgaggtcgag gcggtagatg gcggcgatgc 23581 cgaggccgtt gagcacggtg gcgatgggga ggatgaacgg atccgcgtcg ggcgcgagcc 23641 agcgcagcgc gacgtgcatg ccgagcacaa gcaccgcgag gccggtcgcg gggatgaaga 23701 agctctggtc gaaggcgccg agcacgccga gctgcacgag gtacagggcg ccgccgttga 23761 tgacggaggc cagcaccacc agcgcgagct cgaggttcct gaggcgtcgg ggcacgcgga 23821 tccgggggat ccggggcgcg cgctcgcggg ggcgcgccgg ggcgtccgcc acgccggccc 23881 tagccacccg cggcctcctg cagccggttg acgatctcct cggcgcccgc gagcgagtcg 23941 gcgttgatgg tctgctccac ctgctggcgg tagaacggct ggaggtcgtc gacccgcacc 24001 tcggtgcggg cgtagacgtg cgacagctcg atcgggccga tggtctgctg cacgccgttg 24061 tagaccgcga ccgtgccgtc ggcctcgccc acgtagtagc gcgactgcgt ccagcggtag 24121 ccgaggacgc aggcgaggac gaggcccgcg aggatcagcg cgacccccac cagccaggtg 24181 acgcggcggc ggagggcgcg gcgcttgtcc tccgcgatga gggcctcgag gtactggtcc 24241 gactccggct cgaactgcgc gtcgcgcgcg gccgtggtgg cgcgcagcgg gtgcagcagc 24301 agcgacggga tgcggacggc gcgcttcgcc ggctcgtcgc cgaacgcgag gggctgcgcc 24361 gcggatccga cgagcacggg ctcgggcgcc gggcgggatg cggccgtctc gtcgtcctcg 24421 tcgagcacgt cgacgaccac gaccgtgacg ttgtcggggg cgccgtggtc gagcgactcc 24481 ttcacgagcg cgtcagccac ggtgtcgggc gtgcccgcgg ccgcgaggat ctcggtgatc 24541 cgctcctcgc tcacgtagct gctgagcccg tccgagcaga gcagccagcg gtcgcccgtg 24601 tgcgtgtcga ggacctgcgt gtcgacctcg ggggccgcgt cgacgtcgcc gagcacgcgc 24661 atcagcacgg atcggcgcgg gtgcacgagc gcctcctccg gcgtgatgcg gccgctgtcg 24721 acgaggcgct gcacgaaggt gtggtcggcg gagatctggc tgagctcgcc gcggcggaag 24781 aggtagatgc gcgagtcgcc gatgtgggcg atcgcgacgt ggcggccgac gcgggccagc 24841 gcgctgacgg tggtgcccat cccggtgagc tcggagtgct cgaacacggt ctcggcgagg 24901 agctggttgg cggcgacgag gcccgcctgg agcgcgaact cggcgtcgtg cgcggaggcg 24961 tagggcttgt cggcctcgac gatccgcgtg agggcgaccg cggaggcgac gtcgccgccc 25021 gcgtgcccgc ccatgccgtc ggcgacgacg aagaggtccc gccccgcgta gcccgagtcc 25081 tggttgttcg accggacctt gcccacgtgg gagacggcag cggcctgcgt cactgtcgtc 25141 acgccgctac cgcctgagct cgaagctggt cgcgccgatg cggatcggcg tgtcgagcgg 25201 cacctgcgtc gggacgctca cgcgcttgcc gtcgaggaag gtgccgttgg tcgagtcgag 25261 gtcctggatc atccactcgt cgttccagag gaggagccgc gcgtggtggg tggacgtgta 25321 gtcgtcgcgg atcacgaggc ccgactcgct cgagcggccg atggtgagcg gctcggtgcc 25381 cagcgggatc tcggtgccgg ccttggcgcc cgaggtgatg acgaggtggc gggcggtggc 25441 ggtggtggcc ttcgcgcggg acgggacggc accggagttg gcgccggacg gcatcgacga 25501 gatgggcggc ggctgcacgc ccggctgcgg ggagcggggc ggggcggcgg ccgcggcgta 25561 cggcgactgc gggaacgggg atccgcctgc cgtgcccgtc tcctcgcgca gcttccgcac 25621 gcgctggccg aagaggtcgg agcgcagggc gtagacgatg ccgaagatga agagccacag 25681 caccgcgagg aacgcgagac ggaggacgag gagggtcagc tcggtcacga cgctccccag 25741 aacccgtcgt cgtggcgctg gccccgggtg tcgcgcccgc cgcgctcctc ggtggcctgc 25801 ggcacgacgc ggaaggtgat ggcggtgcgg ccgatgcgga tcacggactc gggcgggagc 25861 ggcgccttcg tgacgggcgc accgttcagc tcggagccgt tcgtggatcc gaggtcgcgg 25921 acctgggcgc gggtgccgtc ccacgcgatc tcgacgtggc ggcgggacgt gcccgggtcg 25981 tcgaccgtga tgtcggcgtc gctgccgcgg ccgatgacgg tgcggccgac ggggagcggg 26041 tggcgggcgc cggcgacgtc gaccacgggc atccacgtga cgctgccctc ggccgtgcgg 26101 ctgtcgatct cgagcacgcc ctcggagatg gcgtcgtcct cgcggaagcc gacctgcacc 26161 acgccggcga actggtagcc ctgcgacgac gcgtgcttct cgaccgcctg gcgcagctgg 26221 tcggtgagcg cggtgccgat gctcgccatc cgctccgcgt cggcgcggga gacccggagg 26281 gtgaaggagt tgggcacgag gatgaggtcg cggtcgacga cggcggcgtg ggtgtcgagc 26341 tcacgacgca gctgcgcggc gatctccacg ggctgcaggc cggacttgaa ggtcttcacg 26401 aaggcgccgt tgacggcgcg ctcgaggccc ttctcgaagt tgtccaggat tcccacgtgt 26461 gatccgtcct cgcgcggtcc ttccgcggat gaatagggag atcgtagcca actcgcgagg 26521 cgtcgccctg gacaccggca ccgcgagggg tgcggatcgc ccgcgggaag gggcgacggg 26581 ggcccgggcg gcgcgggatc ggctccgggc cgtgataatg tcgtccggtt ggcgcgagtg 26641 gcggaattgg tagacgcgca cggttcaggt ccgtgtgtcc gtgaggacgt gggggttcaa 26701 gtcccccctc gcgcaccagc actggaggcc cccgggatca cccgggggcc tcttcgcgtc 26761 ccaccgcgcg atggggccca gccgatcggc ggacgggcac agccgatggg cgggccgatc 26821 ggatccccag gcggatgccc cggcgcgctc gcgctccgca cactggggac gtgacgcacc 26881 cgacgctcgc ccccgatgcc cgtccgcccg ccgtcgaccc cgcggatcgt ccgcccgtcg 26941 accccgccgg gaccgcggcg cccggtgctc gcggcgccgt ccggggcgcg atccgcgtcg 27001 tcggccgcgt gatcgcccgc cacccggtcg cgatcctcgc ggtacccgcc ggcagcgcgt 27061 ggatcggcct catggccggc ctcggcgagc tcgcgcaccc ggccgccacc gccatcggcg 27121 tggcggtcac cgtcctggtg ctgggctggt cggagagccg catcgggatc ctccgcacgg 27181 cgctcgtcgc cgccctcggc tcgctggcgc ccgtcgccgt ctcctccctc ctcctcgccg 27241 cgggcgtcgc gctcggcgac ctctactcgc agatcgacgc ggccgaccgg ctgtgggcgc 27301 cgtccgtcgt gctggtcgcg gtcgccgccg ctgccagccg gggtctcgcg cccgcccatc 27361 gcgacggcct ccgcgccgcg ctgctcgcgg cggtcctcgc ggggctgctc gcgggcggtc 27421 acggggtcga cctcacacgc ggcgtcgcgc tcctcatcgg gctcggcctc ggccggatcc 27481 tcgtgccgct gtccgcccgc cccgcctggc acgaccggac ggcgtcgagc gcgcgcgtcg 27541 tcgccgccac cgtgctcggc acggtgacgc tcagctggtg gatcgccgcg gtctcgggcg 27601 acgcgatcgg cgtgctgggc gcgatggggt cgctgctcga ccccggcccc acggtggcgg 27661 tgctgtgcgt cctgatcctc gccgtcgcgc tcctcctccg cggccggcgg ctcgggctcg 27721 tgctcgggat cgcggcgctg ctgctcgtga ccggtctgct cgcctggtac gacacggtga 27781 tcccgctcgc cgaggactgg ttcgccttcc ccgtcgactc gtggatcgac gtcgagctgc 27841 ccccgctggt gctgaccacg tggctggtgc cggcggcggc gctcgcggtg ctgttcgccc 27901 gccgccggtc gttcgcccgg cgcccgtccg ccgaggggcg tcccgccggg cgcgaccggg 27961 tcctcgcgca gctggcgcgg tccgacgcgg gatccctggg cttcatgggc acgtggtccg 28021 gcagcagcca ctggttcgcg gccgacgacg gcgacccgac cgtccgcggc gccgtcgcgt 28081 accgcgccgc gcacggggtg gccctcacgg tgtcggatcc cctggcctcc gccgacgacg 28141 cgcccgcgac gatccgcgcc ttcgcccggc actgctcggc ccgcggcctc gtccccgcgt 28201 tctacagcat ccactcccgc cacctgccgg tcttcgccga gctcggctgg agcatcacgc 28261 cggtggcgga ggaggccgtg atcgacctcg cgggcttctc cacgtcgggc aagcgccgac 28321 aggacctgcg cacggccgcc aaccgcgcgg ctcgcgacgg cgtcgacgcg ctctggggca 28381 cctaccgcgg cctgccggac gacctgcgcc gcgccgtcga cgcgctcagc ggcgactggg 28441 ccgacgcgaa ggcgctgccc gagatgggct tcacgctcgg aggcctgcgc gagctcgacg 28501 accccgaggt gcggatgctc ctcgcggtcg acgccgccgg tcgcgtgcac ggcgtcacca 28561 gctggctgcc ggtcttccgc gacgggcggc tcgtcggccg cacgctcgac gtgatgcgac 28621 gcggcgccga tccgatgccc ggcgtgatgg agttcctcat cgcgaccgcg gcccgcgcct 28681 tccaggcgga ggggctcgag acgctgagcc tctccggcac gccgctcgcg ggcgtcgggg 28741 agatgcggtc cgctggcgcg gtcgaccgga tcgtggcgcg cctgctcacg gcgaccggcc 28801 gcgtgctcga gccgtcctac ggcttcacct cgctcctgcg gttcaaggcc aagttcgacc 28861 cgcgctacga gacgctctgg ctcgcgtgcc ccacggcggc ggacctcgcg ccgatcgggc 28921 gcgcgctgac ggcggcgtac gtgccgaccc tgcggatccg ccagctcgcg ggcgcgctgc 28981 gggcggcacg cggcgatgcc cgggcccgtc gtcgggcggc caggtcggcg aggcgtgcgg 29041 cacggggcgc tagctgtact gggtcatgac gttggtgaca ctcgggccgc gggcgtgagc 29101 ccgtggctcg agtggatccg ttcagtgttg tagtgctcga tgaaggggtc aagcgcgtcg 29161 gcgcggtgtt ggttgctggt gaagggttgc cggtaggccc actcggtcgc gagggtccgg 29221 ttgaagcgct cgaccttgcc gttctgccag gggcagtgcg ggcggatgaa cttctgccgc 29281 gcgcccaggt cctggacggc gttcttgaac gcggtcgagt gccggtaggc gaacgcgttg 29341 tccgtgatga cccgctcgat ccgggtgatc ccatgcccgg cgaagtacgc cgctgcgcgg 29401 gtcaggaacc cggccgcggt cgcgcctttc tcatcgggat ggatctccgc gtaggcgaga 29461 cgggtgtggt catcgaccgc ggcatggacg taatcgaacc cgatcccgcg gccgcggacc 29521 tgctcgctgc gcccgtggac ccgccagccg cctccgtccg ggatcctccc gagcttcttc 29581 acgtccacgt ggatcagatc acccggatgc tcgtgctcat accggtgcgc cgttgaccgg 29641 gatgcccgga tcacggcccc ggtgacgggg tccaaccatg ccaacggcgg cgccccgtgc 29701 cggcgcagga tgcgggagat cgtacgggat ggaacacctg tcaccggcgc cagccgcgca 29761 ggacccgccc gcaactgggc ccgcgcttcc agcacggccc gttcccgctc cgggctcgtt 29821 cgcctcggta ctgaccgggg ccgcgatgac cgatccgtca gccctcgcag cccctcggca 29881 cggaaccggt tcacccatcg atgcgcgcac tgccgcgaca cccccagctc ccgcgcgacg 29941 tgcgcgaccg gccgacgatc ctccaccacc cgccgcacga ggagaaccct cccgtgaacc 30001 gtcagacgag cattaccgtg ggacatcgag gcctcctggc gatggttgaa ctgaacagct 30061 ccatcaagcc aggaggcctc ttcacacgcc ccgaagtgtc accaacgtca tggccgagta 30121 cagctagcct cggccacgcg ggggaccggg gcggcgcgac cggcggcggc ggatccaccg 30181 gcgggaggcg ggacgcgtga tcgaggcagc gggcgcggtc gacggcagct cctcggcgga 30241 ggccgtcgtg agcgtggtcg tgatcgacga cgagtcgctc gtgcgatccg gcatcgcgat 30301 ggtgctgggc gccagcccgc ggatcgccgt gcgcgcggct gtgtcgagcg acacggccgt 30361 cgcgaccgtg cgggagcacg cgcccgacgt ggtgctgctc gacatccgga tgcccgcgcc 30421 cgacggcctc acgatcctcg ccgagctcat ggccgagccc cgcccgccgg cggtcgccat 30481 gctcaccacc ttcgacaccg acgaccaagt gctcgaggcc ctgcaccgcg gcgcgtcggg 30541 cttcctcctg aaggacacgg atccggagca gctcgcccgg cacgtgctca cgctcgcgtc 30601 cggcgggatc gtgctcgcgc cggggctccg acccgggcgc ctcttccgct cgcgggagga 30661 cgacgccgag cgcgcgcggg tcgcccggct cggcgaccgc gagctggtcg tgctgaaggc 30721 gctcgcgcgc ggcctgtcga acgcggagat cgtcgcggcg agcgggctca cgctcggcac 30781 ggtgaaggag acggtcagct cgatcgtgca ggcgctcggg gtccgcacgc gggtcgaggc 30841 ggccgtcgtc gccgaccgcg ccggcctcgt gccgcggcgg tgagccggcg atgcgcgtga 30901 gcgggagggc gcccgcctcg ggcgacgcga cggatcccga cgccctcgac gcgaccgctc 30961 ccggcgtccg gcccgccgcc gcccgtgcgc gcgcggcgct cgtcgacctg ctggtggcgg 31021 ggatcgccac ggccctgtcc tccgggttcc tctcggcctc gcagtcgtcg ggggaggtcg 31081 ccgcggggat cgccgcctgc ctcggcctcc tgctccgccg ccgctggccg tggctgagcg 31141 tgctggccgc gctgcccgcc ttctccgtca gcatcgcgta cgtgccgctc atgatcgccc 31201 tgttcgacct cggcctctcg cgtgcgccgc ggtggcaggt cacggtcgcg gcgggcgcat 31261 ccctggtcgc gtacatggcg ccgctctggc cgccggagga cgtgcagttc ctgatcgagc 31321 cgctcgtcga cgcgagcatc tacacggtcg gacccgcgct cctcggcgcg tttctccgcg 31381 agcggcggac ggcggcggcc cagctgcggg agctgcggga ggcccagacg ctcgggcagc 31441 tgcaggccgc cgaggtcgcg ctcgcccggg agcgcgcggt gctggcgcgc gagatgcacg 31501 acgtggtgtc gcaccaggtc agcctcatcg ccgtgcaggc cggcgcgatg caggtgggcg 31561 cggccgacga gccctcgcgg gaggccgcgc gcacgatccg agcgctcagc acggtcacgc 31621 tcgaggagct gcgcggcatg gtggaggtgc tccgcgcggc cggcggggag cggcgcgagc 31681 tcgcgccgca gccgaccctc caggacgtgc cggcgctggt ggcggccagc gggatcagcg 31741 tggagaccga gatcgacctc cccgccgacc tgtccgccgc cgcccagcgc gccgtctacc 31801 gcacggtgca ggaggggctc accaacgcgc ggaagcacgc gaccggcgcg cccgtgcgga 31861 tcaccgggcg cctggacgcg ggccacgtgg tgctcgaggt cgaggcgggc cgggcgacgc 31921 tcccgctgct cgacctgccg agcggacgcc acgggctcac cggcctgcgc gagcgcgccc 31981 agctgctcgg cgggagcctc gcggccgaga cgcgcgccga cggatcccac ctgctgcggc 32041 tgcgcttccc gctctgaggg gggtcggccg gtcggcgcct gcgcggctca gcggcccgcc 32101 gtcgaggagg agaccgtggc cggttcggcg tcggtcgccg gctccgggcc gggccagatg 32161 gtccacgcga ccgcccagac ggtgcagatg ccgaggagga cggtgagccg gccgagccag 32221 tccccgagcg ccccggtgcg ggcggggtcg ccgacgaacg cgatggcggc gaggagcagg 32281 gcgcaggcga tcgtgtaggc gacgaccgtg aggatccaga gccgccactc gtggcgcacc 32341 ctggcgcggc cggacctgag cgggcgcacg ggcgcggggc cgccggcgaa gcggtgggcg 32401 aagcgcacgt cgagccagcg caccatcgag tggccgaagg cgacggatcc gccgaggtag 32461 gcggcggcga ggccgtgggt ccagtcggcg gtggcgccgc cgcggaggtc gatggtcgcg 32521 gcgacgagca gcacgagatc gacgacgggc acgcacgcga ggagcacggc gccgaggcgc 32581 gggcgccgga ggacgtagcg gacggcgagc cccgcggcca gcacggccca gaagccgatc 32641 tcgcaggcga tgatgacgac gacgatcatg cggcggcccc ccggcgctcg gctggtctcc 32701 accgtatcga cgcgggtccc ggcgacgacg ccccagatga ggggcgccgg ccggacggcg 32761 gctcagccct gccgtgcctt gttccgcggg ttctgcttgt tgatgacgaa gacgcggccg 32821 cggcggcgca cgacctgcgc gccggggagc ttcttcaggg ccttgatcga gttgcgcacc 32881 ttcatgggga tggtcctttc acgagaacgg ttctcaatag actacagcca tgcccgctcg 32941 cgaccacctg cccctgcccg tgtacccgca gccgccgtcg ggcgtcgtcc tcgtggtggg 33001 cgagggatcc ggcctccgct cggtgctgcg ggacgcggtc gacgacgtcg cggggacgct 33061 gctcgtgctc ccggccgagg aggcggatcc ggtcgagccc atcgcgcggt tcctcgacga 33121 cctcgccggg cgcgggccgg gcgtcgaggc cgtggtgggg atccccgcga ccgccgacgt 33181 gcgcgcgacc gggatgcagc tcgacctcct gctgcgccgc gagcacgagc tgcggcgcgc 33241 gtccggcggg tcgggatccg gcttcgggct gcgccacgtc gtctcggtgg tggccgccga 33301 ccggctgcac tccatcgcgt tcggccgcgt cgaggacgcg ttcgacgagg ccgagacgct 33361 cgccgacctc gtcgagtacg cgaccgtggt ggtgctgacc ggcatggcgc gcgtgccgcc 33421 ggagtcgcgc ggcacgctgc tcgcgctcgt gcgccggctc gcgccgcgcg ccgccgtgct 33481 cgacgcgcgc cggccgctcg cgctcgaccg gctgccccgc tggggcgacg tggcggggct 33541 cgcggcgtcg gcggggtgga tgcgcgagct cacggcggcg ggcgtcgcgt cacggccggg 33601 ggaggtcgac cggctcgacg ggcccgtggg atccgtcgtc gtcggcgacc cgcgaccgct 33661 gcaccccgag cggctcgcgc tcgccgtgga ggaggagctg cggcccgacc gcgcgggcct 33721 cgtgctgcgc tccaagggct tcgtgtcgct ggcgtcgcgg ccgggcgagg tgggcgggtg 33781 gtcgagcgtg ggatcgatgc tgacgctgca gccgaccggg atcgacccgt ggcaggaggg 33841 tgcgccgcac ggcacggaga tcgcgttctt cggcgtgggg ctgcggcccg ccgtgctgcg 33901 gcgcgcgatc ggacgggccg tgctcacggg cgaggagctc gcggcggggc cggcggagtg 33961 ggccgggtac gcggatccgt tcccccgggt ggtcgcggac tgacggggcc gcgcgttcgt 34021 catcccgcgg tcggcacctg tcccggcgcc cgcgcggcgc gcccggccgc aggggagcgt 34081 gacggtccgc cgtgagcgcc tgcgcgcgcc tggtcactgc tcggcccgcg gcgttcagtg 34141 gggaggtgaa gcagaaccgc accgcggcgg gcacgacccg cagcacccgc acgaccacgc 34201 gcaccgcgca cgaccgcgcg cccgacggcc gcacgccgga cgagcggccc gccgccgggg 34261 atccggccat cgtcccggag cccgcgccgg gacccgagcc cgaggacgcg atccgcgtcg 34321 cccgcgagtc gttcggctgg gaccggctcc atgacggcca ggtgcgcacg atcggcccgc 34381 tcgtccgcgg ccgcgacgcg ctcgtcgtga tgcccaccgg ctacggcaag tccgcgatct 34441 accaggtcgc gaccgtgctg atggacggcc tgaccgtcgt cgtctcgccg ctcatcgcgc 34501 tgcaggccga ccaggtgcag aacctcgagg acgcgcccgc ggcgccgccc gcgcgcgtga 34561 tcaacagcac gatccgcggc acggcgctcg aggaggcgtg ggcgaccgtg gaggagcccg 34621 gcgcgcggat cgtgttcctc acgcccgagc agctggcgcg cgacgaggtc gtcgcgcggc 34681 tggtggcccg cggggtggcg ctcgtggtga tcgacgaggc gcactgcgtg gcgtcgtggg 34741 gccacgactt ccggcccgac tacctggggc tcggcggcgt gatcgacgcg ctcgggcacc 34801 cgccgaccgt cgcgatgacg gcgaccgggt ccacgcccgt ccgcaccgag gtcgaggagc 34861 ggctggggct gcgggacccg ttcgtgctgt ccagcgggtt cgaccggccg aacatccggc 34921 tcgaggtgcg gcggcacacg gaggagtcgg agaagcggcg cgcgatcgtc gcacacgtga 34981 tggagcagac gcagccgggc ctcgtctacg tcgcgacgcg caaggacgcc gaggactacg 35041 ccgacgagat ccgcgtggcc ggcctccgcg tcgacgcgta ccacgcgggc ctgccggcgg 35101 ccgagcgcga gcgcgtgcag accgcgttcc acgaggacga cgtggacgtg gtcgtggcga 35161 cgagcgcgtt cggcatgggc atcgacaagc cgaccgtgcg gtacgtgatc cacgcgtcgc 35221 cgcccgagtc ggtggacgcc tactaccagg aggtcgggcg cgcgggccgc gacggggagc 35281 cggccgtcgg gatcctgcac taccgcgccg aggacctcgg cctccgccgc tacttcgcgg 35341 cgcgcacgcc gcggccggcg agcctccgcg acgtgtacgc ggcggtcgcg gtggcgggcg 35401 tcgacggacc cgtgcggccg gccgcggtcg ccgagcgcgc ggggatgtcg gcgcgcacgg 35461 tgggcggcgt gctcggcctg ctcgtggacg cgggcgtgct cggatccgac cgggacggcg 35521 ccttcgtgcg cgaggagctg gatccccggg aggccgcctc gcgtgccaag ggggtcgcgc 35581 aggagcgcga acgcgtcgag gtgtcacggc tggacatgat gcgcggctac gccgaggcac 35641 cgcagtgccg ccgccagttc ctgctcgggt acttcggcga ggagtcgccg gagcggtgcg 35701 gcaactgcga cgcgtgcgac cggctcgagg aggaggacgc gcacgaggag gcgatggggg 35761 cgacggacgg cggctccccg gtcgcgtcgg acgagatgtt ccccgcgcag tcgcaggtca 35821 cccacgccga gtggggcccg ggcaccgtga tgagcacgga ggacgaccgg atcaccgtct 35881 tcttcgagac ggaggggtac cgcgtgctgt cgcggaggct cgtggaggag gggtcgctgt 35941 tgcagccggc gtgaggcgtg ggccgccgcg ggcgccgacc gcatcgagcc gcgctccgcg 36001 cgcatggctg acggcgacgc tgccgtcggg ggagggcggt gccccgccct ccccccgagg 36061 ggcgctagcg gaggacgcgc aagtcggtcg cggcctcgat cgccgtgatc gaggtgaagg 36121 cgctgcggga ggcgccgccg cgggggatgt cgccgtagtg gatcccgtat gcggtgttgc 36181 cgtagtacca gggtccgccg ctgtcgcccg cctcggtgat gtagccgtcg acctgccaga 36241 ggttcgcgta ggtgacgccg ttggcgttga ccgtggtggt cgggccgttg atcacctgcg 36301 agcagccgta ggccgtgacg gtgccgtact tgcagacgtt catgcccacg aagggcgtgg 36361 cgacggcggt ggccttgcgg cggatcagcg tggacccggc cttctggctg atgaactcgt 36421 tgtgcacgcc ctcgctcgag ctgaaccact gctcgtcgag ctggccgctg tcgccgtggc 36481 cctcgaaggt gaggatctgg cgggactcgt agtttaggtt gtcggggcag tgcgatgcgg 36541 tgatcaggcc ggtggcgccg gtgcgcgcgt tgcggaccgt gaagccggcc gtgcaggcga 36601 gctgctgcgt ggcgccgatg ccgagcgcgg tgccgccgga gaggacctcc tggctcgggt 36661 cctcgtcggt gagggcgacc tcgacgggga ccgtcgttgc ctgggcgacg gcggcctctg 36721 cctggtccgt ggcggcctgc gcggcggagg tgacgtcgac ggacgcggat gcggatgcgt 36781 cgggcaggac cgcggccgcg gtgacggtcg tgccgtcctc gctcatgctc gcctcgacgc 36841 tctcggcgcc gagctcggcc tgcacggcct gcgcggcggc ggccacggcc gtgctgcgct 36901 ccacggcggt gaggggcgcg tccgtcgtgg tgcggacgtc cggggcgagc tcgccgagcg 36961 gcgcgagcgc ggcggcggcg accggcgcgg tgaaggcgac ccagtagccg ggcccggtgg 37021 cgtccttgcc ggcgttcgcg aagccgtcca cgccctgcag cgaggcgagg gcctggccga 37081 acagcacgtc gcggtgctgc tcggcgcgca cctcctcgac ggggcggccc gtctgctcgg 37141 cgatgtgcgc cgcgtcgatc gcctcggccg cggcgtcgga cacgggtgcc gcgaccggct 37201 gctcgaccgc ggcctgctgg cgcgtctccc cgaacgccgg gctcagggat gtcaccccta 37261 atatcacggc agtggccgct gtgatggtta cccatttgtg acgcatgcgc gaactccctg 37321 attcatgtgc aaatcggtgc gcggaatgcg cccccgctca tcgtgcacct gcggaggcca 37381 tcgcggtaac gcgagggcgg ccaactcccg agtacccgga acgcccgtcc gcgtgtgccc 37441 tcacttatga ggacttgcgc cgcatcgaaa tgcctgaaaa cacgcggaaa atgccccgac 37501 ccccattccg ggggtgattc gaggcggggc acggtcgcgt ccgcgtgcgc ccctaacgtg 37561 agaacgggcg atgacgcctg tttttcaatc aggggagtaa aatgcgcgtt ccacgcgttt 37621 tccgccggca gaacgccggc aatatcaggt gcacgatcgc gatgatcgcg acgagcgccg 37681 tcatgatcac ggggctcggc gccatgccgg cctccgccga gacggccgcg gggctggtgc 37741 agttcgagga ccagacgcag gaccctgcgg tgatcaacaa gcagatgcag gacgaggccc 37801 agaaggccgc gaaggccgcc gtctggacgc cgggcacgat cccggccgag cccgccgacg 37861 ccgacaagcc ggccccggag ctgccccagt ggaaggtccc gaatccggac cgcaagctgg 37921 gacaggccgt gtccacccag cgcgtccccg ccggtacgcc ggtcggcgca ccgggcctcg 37981 gcgcgctgcc ttacatgtcc ttcgaggaca tctcgctctc cgacgacacc gtcgcccgcg 38041 tgaacctcgc gaacggcaac ctgctgctca ccgcgaacga cggcaccagc tccgccgccg 38101 gcatcggcgt ccgcgccgac cgctactaca acggcctctc gagctccgcg ggcgccctcg 38161 gcggcggctg gtcctccgtc atgagcaacg tcgacttcgg cctgtccgtg aacagcggcg 38221 agaccgaggc gacgttcgtc ggaccgaccg gcttctccgc gaagtacacc aagaacagcg 38281 ccggcgcgtg ggtcgctccc gcgggcttca acgcgtccct gagcaagggc cagttcacct 38341 ggaagctcaa gtacaacaag agcggggagg cgtacgactt cgacgtcacc acgaagcagc 38401 tgacctacca caccgaccgc aacggcatcg gcctcaccaa cgactggacc acgtccgcca 38461 cgacctacac ggtcaaggac acctccggcc gcttcacgcg cgtgaaccac accactggat 38521 ccgacccgaa gatcacctcg atcgtcgact cggccaaccg caccaccacg tacacgcgga 38581 acgggtccgg gcagctgacg aagatcgaca agcccggcgg cgccgtcacg acgatgacgt 38641 acgacacgac gggtcgcctc gcgacgatga ccgtcccgtc cgcccccggc acgacgacga 38701 tcacgttcgg ctacagcacc gcgcacaagg tcaccaagat cacgcagaag tccacgtccc 38761 cgacctacgg gaacaaggcc gacgtcgtga cgaacttcgc ctacaacagc ggcaacaccg 38821 tcgtcaccaa cccgaacggg aaggcatcga cctacgcgta cgacaaccag ggccgcgtca 38881 cctcgaccaa ggatccgctg aaccgcaccc gctcgcagag ctggaccgcg aacagcgacg 38941 tccagacctc gaccgatgca ctcggctccg gcagcacgcc cggaaacgag accaagaact 39001 cctacgacgg cctgaacaac gccacgaaga ccgagctgcc caccggcgcc gcggcctccg 39061 cggtgtactc ggccggtgcc ggttgcgctt cgagcggcgg cgacaccttc caggtgaagt 39121 gctccaccga cgccagcggc aacaccgcca gctacgacta cgacaccgct ggcaacccca 39181 ccaagaagaa ggacaccacc gctggtggca ccggcgcggt cgagttcgag cgcgtctacg 39241 acaactggga ctccaccatc tgcggtggcg ctccgggcca ggtctgctcc gccaaggacg 39301 gcaacgggaa catcacccgc tacgcctatg acggcatgta caacctcgcc aaggtcacgc 39361 cgcccgcccc gcagggcgcg acgacgtaca cgtacgacgc gctctcccgt gtcacgagcg 39421 tcaccgaccc gcgcggcaag gtcacgaagt acgcctacga cgtccgcgac cgccagacgc 39481 tgatcacgtt cgccaacggc agcacgctcg cgaagacgta ctacccgaac gggctcgtcc 39541 agtacgactc cgacagcttc gccgggacca agcagttcga gtacgacacc ctgggccgca 39601 ccaccagcca gatcggtgct ctcgccgggc tgaaccagaa gtacacgtac gacgcggccg 39661 gcaacatcct cactttcgag gacaccagcg gcatcacgac caacacctac aacgccgcca 39721 acgagctcac cagccagcgc gagcccggcg gtgtctgccc caccagcggc aaccccgccg 39781 cgaacagcgg atgcacgctg ttcgagtaca acggcaatgg cgtggagacc cgtcgcgtct 39841 tccccgccgg cgcgcagatg gtgaccaccc tcgacaaggc aggtcgcacc acccaggtgc 39901 aggccaagaa cgccgccggc ggcgtgaccg ccgacgtcgc gtattcgttt gcaaaggatg 39961 gcgtggacac gcttgacatt cagacccgca ccagcggcaa ggaagagggc atcccggccg 40021 gcgcggtcac cgcgtaccag tacgactcgc agagccgcct cacggtcgcc gaggagaagg 40081 ccggcggcaa caccaacgcg atgtgggcgt acgcctacga cgccgcgggc aaccgcacgt 40141 cgcagaaccg ctccggcaac accggcggca cgcaggacac ctcgatcgac tacggctaca 40201 acgcggcgaa ccagctcacc agcaccagcg ccgacaccac ccagtgggtc tacgacgccg 40261 ccggcaacca ggtcaagaac ggcatgacgg gtgtcgtcgc gacctacggc gaccgcggac 40321 aggtccagag catcggagcg acgaacttcg ccgccttcgg cgagggaaac accgacaccc 40381 agagcgccac gggtggccga tccttctcca actcgatcct cgggctctcg cggcagacca 40441 acacgtccgc cagcctcgtg cagaactaca gccgcacgcc ttcaggcgag gcggtcggat 40501 tccggatctc gtccagccac tactacgtca ccgacctcct cggctccgtc atcggcatgt 40561 tctccggtgc aggcatctgg gagggcggct actcctacac tccgtacggc gaggagcgcg 40621 cgacgtcaag caacagcgcg gtcgcgctga actcgctgcg ctacatcggc ggctaccagg 40681 agtcgaccaa tctctacaag atgggcgcac gctactatga cgcctcgctg ggccgcttca 40741 cgcagatgga cccgtccggc caggaacctc agccgtacgc atacgctgca tgcaaccccg 40801 ttggtaacat cgatccgagc ggcctcagct gcgccggagc agtcgccggc ttcatctcgg 40861 ccgcaggtct gctactgata acagcaggct ttgcgcttac cactcccgtc ggtgctatcg 40921 ccacggccat caccgccggt ggcctccttc tcgaaggggc tggcgtgtgg gctacctggc 40981 aggaagtcaa ggaagagtgt gatctatgag caatttaact ccgtcgtcca ataaaggaag 41041 agtcgctcag agcgtcgtcg tcatactggt tgcaatcgcc gtattgctcg ccatcacagg 41101 tttcatgggt ggcaaccttc tgatcggtag catcttctcg gcagtggcgg tgttgctggc 41161 cgtagggggc tacttcgccg tacgagacat tggccgtcgg gagctctaaa ttcaattaag 41221 gctccaatca gcggccccgt tgactctcgt cagcggggcc gtgagcacgc gtcgacgacg 41281 cgagcctcac tgatgccgcc tcgcggcggg cactttgcag acgcagcgaa gcgcaggacg 41341 tgccttgggt cgggcctgtg tcgcgggata tatcgagtga catcatagat actactctca 41401 cccaggaggc gactcggtca tctggtcaca ccagaccaga cccgagctgc gttttgcgtc 41461 tatgccgata atgactcaga cgcatgagaa aatgcgccat tcagcctatt ctctgtttcg 41521 caacgaagtc ataaaaggtg tgttgcccgc aataattagt accgtgccac ctacaaaacc 41581 aaggatttgc tcttcagggt tgaatactcc gtagtgacgg ccaccacccc ggcgaacagg 41641 gcaaaaagca aatcgttcgc cagaatgcac cggatgtgtc ggtggagttg gacataaccc 41701 attgtctcgc aaaacgagac gtgatatgga aactagaacg aaaatggtca ccgggcagaa 41761 ggcttattac tctgcgaggc tcgcggtcgg atattcgaat gtctgtcgat agacgcggtg 41821 tcggcggagg tcgacggcgg gccgggcctc ggcgcccctg cgggggttcg ttcggcgagg 41881 atgatgcgct cgtccgggag tcgctcatcg agctgctcga ggaccggtcg gctcgagggg 41941 ccgcagatgg tgacgacagc gaggccgatc tcctcgcgag gccggtgcgc gatctcgagg 42001 tcagccgcag gagcaggtgg tgttgtcaat tgcggagccg gagccgcccg ggagatgtca 42061 ctgtcgcgct ctgacgcctt ccgagctgtc tgcgagggtc gatccatgca cctctctttc 42121 ctgcaccgca gccgctggat cacgtacggc accgcgatcg ccatcgggct cgcgggcgtc 42181 gccgggctgg tcgtcggcaa cccgcggggg tggatcccgg tcgggatcgc cgtgctcgcc 42241 gtgctgttcc agcggctcgt gtcccgggac gcgcggcggg cgcaggaggt cggcacggat 42301 ccgcgcgaca ccgtcggctg accggctcga ctagccgcat aacgtcgatg cagatgcatg 42361 caactgcgac atggcttacg ttgtcaatca gcgggacgag cccttcgggt gggctgtcct 42421 gcatcacgtc ggcgtctcgg gggagcgcgt ccgaccgccc ggccctccgt gcacggaggc 42481 cgggccacac ctcttcccgc gtcgtcgcgg ggtcgcggcg gcgcggcagg cagcgctgcg 42541 tcccgtccgg gacttccgcc gcccgcgctg gcaggctcga cgcatgaccg tccccgctcg 42601 gagggcacgc tgcacgcctc ggccgacgac gcggtggccg cctgcgcgcg ggcatgcgcg 42661 gtgctcgtga cgcccgagat cctcgcggcg atgggcgcga cgctcgcgtg cgcccggacg 42721 cgaccccgcg ctagctgtac tgggtcatga cgttggtgac actcgggccg cgggcgtgag 42781 cccgtggctt gagtggattc gttcagtgtt gtagtgctcg atgaaggggt caagcgcgtc 42841 ggcgcggtgt tggttgctgg tgaagggttg ccggtaggcc cactcggtcg cgagggtccg 42901 gttgaagcgc tcgaccttgc cgttctgcca ggggcagtgc gggcggatga acttctgccg 42961 cgcgcccagg tcctggacgg cgttcttgaa cgcggtcgag tgccggtagg cgaacgcgtt 43021 gtccgtgatg acccgctcga tccgggtgat cccgcgcccg gcgaagtacg ccgctgcgcg 43081 ggtcaggaac ccggccgcgg tcgcgccttt ctcatcggga tggatctccg cgtaggcgag 43141 acgggtgtgg tcatcgaccg cggcatggac gtaatcgaac ccgatcccgc ggccgcggac 43201 ctgctcgctg cgcccgtgga cccgccagcc gcctccgtcc gggatcctcc cgagcttctt 43261 cacgtccacg tggatcagat cacccggatg ctcgtgctca taccggtgcg ccgttgaccg 43321 ggatgcccgg atcacggccc cggtgacggg gtccaaccat gccaacggcg gcgccccgtg 43381 ccggcgcagg atgcgggaga tcgtacggga tggaacacct gtcaccggcg ccagccgcgc 43441 aggacccgcc cgcaactggg cccgcgcttc cagcacggcc cgttcccgct ccgggctcgt 43501 tcgcctcggt actgaccggg gccgcgatga ccgatccgtc agccctcgca gcccctcggc 43561 acggaaccgg ttcacccatc gatgcgcgca ctgccgcgac acccccagct cccgcgcgac 43621 gtgcgcgacc ggccgacgat cctccaccac ccgccgcacg aggagaaccc tcccgtgaac 43681 cgtcagacga gcattaccgt gggacatcga ggcctcctgg cgatggttga actgaacagc 43741 tccatcaagc caggaggcct cttcacacgc cccgaagtgt caccaacgtc atggccgagt 43801 acagctaggc gggcttgccg ggctcggcca cgtgctgacc ggtggacgac gggatcgtgt 43861 gcgcgccctc ggccgacggc cggccggcca gcaggtcgcg gatctcgatg agcagctcgg 43921 tctcggtctg cggcacgtcc ttcggcgtcg cctcctcggc ggccttctgc ttggcgaacg 43981 cggtcttctt gaggtggttc accggcacga cgagcgcgaa gtacacgacc gcggcgacga 44041 tgaggaagtt gatcagcgca gccaggacgg cgccgaagag gagcgtcgcc ggcttgccgg 44101 tggacgtcgg gatgtcgacc ttgaaggcgt cggccagcgt cgaggcgttg aacagggcac 44161 cgatcagcgg gttgaagacg ttcgtgacga tggccgtgac gatcgcggtg aacgcggcgc 44221 cgatgacgac ggcgaccgcg aggtcgatga cgttgccgcg gaggatgaag tccttgaagc 44281 ccttcacggg tgctcctgtc tggcgggccg cccgatcagg tggacggcga ggacgagccg 44341 gagcccgagg acgcgggacc ggagggggtg ctgggggtca cggtaccgga gccctggccg 44401 acggtgccgg aaccggacga cccggacgag tccgacgaac cggacgacga ggagtcggag 44461 gacgacgacg aggacgacga gtcgcccgac ttcgccgacg acgaccctga acccgatccc 44521 gatcccgacc ccgaccgcga ccgcttcgcc gcgtcctcgg tgcgcgagtc gttgcggtag 44581 aagccgctgc ccgtgaagct cacgcccacc gcggcgaaca gcttgcggag cttgccaccg 44641 cacacggggc actcggtgag ggagtcgtcg gtgaacgcct ggacgatgtc gaaggcgttg 44701 ccgcacaccg tgcagcggta ggagtacgtg ggcatgggtc cctagaagga gtggatgagt 44761 gtcggggtca cgatgccgtc gaccggcatg tcgtgcttct cccgcgggag ctcgtcgacg 44821 aactcggcgt cgaacaccac agcgtagacc gggggacagg cctccatcga tccgagggtc 44881 ttgtcgaagt agccgcgacc ccagcccatg cgcatgccgc cctggtcgac cgccgcggcg 44941 ggcacgacga tgaggtcgac gtcgttgatg gcgatcggcc cgagcagctc gcccaccggc 45001 tccggcaggc cgaacaggcc ctcggtctcc gtgccgtcgc tcacgaccca gtcgaggagg 45061 ccgtcgttgc gcgacaccgg caggagcacc tggcggtcgt tcgcgtgcag ccactggagg 45121 aagggacgcg tggtcggctc gtcgacggtg gacaggtagc aggccacccg gctcgcgtcg 45181 tggttcgcca cgagctccgt caaccggctg gtcaggccgt gcgccgcctc gtcgcgctcc 45241 gtcgcggtca tctgccgacg acgctcccgc agctgggcgc gcagggccct cttctcgttc 45301 ccgacttcgc tcggcatggt tcgagtctag gtacgttccc ccgctacgct cgatcgcatg 45361 gtcacccaca tcactaaggc cgtcatcccc gccgcgggac tcggaacgcg attccttccc 45421 gcgacgaagg cgatgccgaa ggagatgctg ccggtcgtgg accgcccggc catccagtac 45481 gtggtggagg aggccgtggg cgcgggactg cacgacgtcc tcatgatcac cggccgcaac 45541 aagaccgccc tcgagaacca cttcgaccgg aacgccgagc tcgaggccac cctccagctc 45601 aagggcgacg acgcgaagct ccgcaaggtc aacgagtcca ccgacctcgc cgacatgcac 45661 tacgtccgcc agggcgaccc caagggcctc ggccacgcgg tgctccgcgc cgagatgcac 45721 gtgggccgcg agccgttcgc cgtgctcctc ggcgacgaca tcattgacaa gcgcgacgtg 45781 ctcctctcgc gcatgatcga ggtccagctc cagcgcggct gctccgtcgt cgcgctgctc 45841 gaggtggatc ccgcgcagac tcacctctac ggcgtcgcca cggtcgaggc caccgacgac 45901 gacgacgtcg tgcgcatcac cggcatggtc gagaagcccg ccgccggcac cgcgccctcg 45961 aacctcgcga tcatcggccg ctacgtgctg cgccccgagg tattcgacgt gctgcacaag 46021 acggagcccg gcaagggcgg cgagatccag ctcaccgacg cgctcgagaa gatggccgcc 46081 gcgcccgagt ggaccggcgg cgtgtacggc gtggtcttcc gcggccgccg ctacgacacg 46141 ggcgaccggc tcgactacct gaaggccatc gtccagctcg gcgtcgatca cgaggacctc 46201 ggcgagggcc tgcgcgagtg gctgcccgag ttcgtcaaga ccctcgagcg ctgatccccg 46261 acggcggcgc gcggtccggt cgcaccggcg tccgcgctga ggcctaggct catggacgtg 46321 ccgcagaccg tacccaccat gcgggacggg cgcatctccg tccggcccat ccggctccgc 46381 gactcgcggg ccctcgagcg atcgctgctg gacaaccgat cgtggctccg caagtgggag 46441 gccacgagcc cctacgtgcc gatggcgttc gacacgcggg cgagcatccg gtcgctgcag 46501 gccaacggcc gcgccggcct cggcgtgccg ctcgtcatcg actacgacga cgagttcgcc 46561 ggccagctca acgtgtcgtc catcgcctac ggatcgctct cgagcgcgac catcggctac 46621 tgggtcggcc aggagttcgc gggccggaac gtgacgccca cggccgtcgc gctcgcgacc 46681 gactactgct tcacgacgct cgggctgcac cggatggaga tctgcatccg cccggagaac 46741 gcgcccagcc tccgcgtcgt gcagaagctt ggcttccggt acgaggggct gcgccgccgg 46801 tacatccaca tcaacggcga ctggcgggac cacttctgct tcggcctcgt ggtggaggag 46861 ctgtccacca gcgtgctcgt gcgttggaag gacggcggcg tggatcccga gtggtcgcgc 46921 gtccccgacg ccgacgtcga ggcggccgcg acgccgctgg ccgtgcagcg ccggatctga 46981 ccccgccccg tccgcggacc tgcggatgcg ccggtccggc cgtggacacg cggcgcgctt 47041 cccgcggcgc acccgcccga cctcctagcc tcgggatcat gcaatccggc ggcataatca 47101 tcgcgctctc cgcggtgctc tggctcgcct acctcctgcc cacgtggctg caccggcgcc 47161 agtacatggc gaccgagcgc aacgccgtgc gcctccagca gaccctgcgg atcctggccg 47221 atacggccga ggtccccgac gcggtgcgcg cggagaccag cgcccgcagc gtcgtcgagc 47281 agcagcgcgc cctccgccgg gccgccgaag aagccgaagc cgccgcgcgt gcgcgagacg 47341 ccgccgccca gcgcgcccta ccgaaagtgg cccccgtgtc cgcaacgtcg ccctccgccg 47401 ccacgcgcct ccgccgcacc cggctcgccg ccaccgccgt cctcgcgctc gccctcgtcg 47461 gcgtgatcgc cgggatcgcc caggtcgccg gtggcagcgc ctggacgctg ctcgtcatct 47521 cctccctcgc cacgttcggg tcgctcgcga tcctgcaccg catgtcacag atcgccgccg 47581 cccgtcgcct ccaggcgccg gaggtcctcc agcggccgcg caccggcttc accgacttcc 47641 acgagcaggc cgcgcagccc gccgagcccg tcgcggagcg cgaggagggc gagtcctgga 47701 cccccgtgcc cgtaccgaag ccgctgtacc tctcccgctc gcaggcgccc ggcccgcgtc 47761 ccggcgccgg cggtgccccc cgcacgccgc tgtcgcctgt cgaggagatg cgccgcgccg 47821 ccgccgcgtc cgaggagacg ctgcgccgcg cgcacctcga gcccgaggtc gcgcgcctgt 47881 cggccgagga ggaggaggcc gctccggcgg catccgtcgc tccggccccg cccgccgcgc 47941 gcaccgctcc ggtcagccgc ttctcccgca tgggcatcgt tgacgacgcc gagcccggca 48001 tgggagacct cgacgaggtg ctgcgtcgcc gccgggcggt tggctagtcc accggtccgt 48061 ccccaggagg gccgccgtcg cgcggtcggc tgatccgcct tcctccacgc cccgcggttc 48121 ggagggctcc cggtgacgtg gtagtctcgt ggagttgtca gggcctatgg cgcagttggt 48181 agcgcgcctc gttcgcatcg aggaggtcag gagttcgaat ctccttaggt ccacaagaac 48241 cccgctccgg cggggttttt gcttgtcgcc ggcatgctgg agtccagcct cacgtcctgt 48301 gagggaaagg cgcataccac gtgatgcggt cctagtcttc tcgcatgaag acaccaagag 48361 gcctcacctc cgcactgctc ggactgctcc tccccatcgc cctcgcgacg gcaggagcgt 48421 cagctgcctc ggcctccgca gctgtgccgg gatccgccgc ggcccagccc gccgccacgt 48481 cgaccgcgtc gagcgcgtcc ggatggctcc acacggacgg cgggaggatc gtcgactccg 48541 ccggctccac gtacacgatc cgcggtgccg cctggtttgg gctcgagtcg tcgggctgcg 48601 tgctccacgg gctcgacaag atcaccctcg acagcggcat gaagcacctc cacgacatgg 48661 gcttcaccac ggtgcgcatg ccgttcgcga acagctgcct ccgggcgtcg agcgtcgccg 48721 aggggggtac caccgccaat ccggttctga agggcatcac cccgctgcag ctcatggacc 48781 gcgccatcgc ctctgccaag gccaacggcc tgaacgtgat cctcgaccag caccgaccca 48841 cgaccgatgg gcagtccgag ctgtggtaca cgcctgacct ctccgaggcg cagtggatct 48901 ccgactggaa gatgctcgcg gaccgctaca aggacgaccc cacggtcatc ggcgtcgact 48961 tgcacaacga gccgcacggc caggcgacct ggggctccgg ggacgcggcc accgactgac 49021 ggctggccgc cgagcgcggg ggtgacgcgg tgctgtcggt gaacccgaag ctgctcgtca 49081 tcgtcgaggg aaccgacaag cagcccgacg gatccggcac atggtggggc ggggccctcg 49141 gcgccgcggg cgacaagccc gtcgagctga gcgtcgcgaa ccgcgtcgtc tactcgccgc 49201 acgactaccc cgcgagcatc tacgggcagt cctggttcag ctcgccggat tacccggaca 49261 acctgcccgg cgtgtgggac gcccactggg gctacctcgc gaagaagagc atcgccccgg 49321 tgctgctcgg cgagttcggt acgaagctcg agaccaccag cgacaagcag tggctgacga 49381 ccctggtgtc gtacctcaag accaccggca tcagctcctc gttctggtcg ttcaaccccg 49441 acagcggtga caccggcggg ctcgtgcaga gcgactgggt cacgcccgag caggtgaagc 49501 tcgacgcgat ggcgccgatc ctccacccga ctgagtcgtc gggttccggt tccggagcgc 49561 agcctgcacc gcagccgcag ccgcagccgc agccgcagcc ccagcctgca ccgcagcccc 49621 agcccgcgcc ctccacgtcg ggcgccgtga cggcgacgtg gcagcccggc ggatcatggt 49681 cgtcgggcta cgtggccggc ctggacgtca ccgcgaagtc cgcggtcgcc gggtggaccg 49741 cgtcgtgggc gagcccgggc acgacctccg tcgggaacag ctggggagtg cgctgcacca 49801 tcgcgaccgg caccgtgacg tgcacgggcg ccgactgggc gggtgcgcta tccgcgggcc 49861 agaccgtcca cgtcggcctg caggcggcgg gcgggccggc cccgtcctcg ccgcaactca 49921 cggtgacgag ccgctgacca ccttcccgca tccacgacgc cggtcgccgg gcacccgccc 49981 ggcggccggc gtctcgccgg ttaagctcga ccggtgcccc gccccgcgat cccgtccgtg 50041 accatcgcca ccccggaggt ccgggcgctg cgcgccgacc tcgaggcggc gcccttcacc 50101 gtcgcgtctg cgctcgacct gtggggcgat gcggccggga aggcgctgca ccgggggaac 50161 cggatcccgg cccgtcgtgc tgtcgaggcc gcccgcaccg ccgacgggtt ccccgcggcc 50221 gccgtgctcg cgtccctgtt cgtgctgggc gacccggtcg acgcagacga cctccgcgct 50281 gccctgccga cgctcggcct cgacggcgcc gcgcgtctcg gcctcatcga ggtcgacggc 50341 gaccgggtcc gcccggcggt cgacctgcgc ccctacggct tcatcgacgc acacggcgtc 50401 ggcgagtggt ggatcgcctc cgacctcggc gagctcgcca ccggcggcgc gctcgacgag 50461 gaccacgtgc tcggcgtcgg cggcgcgtcc gcgaccctca gcggcctcat gatctccgcg 50521 cccgtcgcca ccgcgctcga cctcggcacc ggctgcggga tccaggcgct gcacgcctcc 50581 cggcacgccg accgcgtcgt ggcgaccgac atttccgcgc gtgccctcgc gttcgcggcg 50641 ctgaacgcgg cgctcaacgg gatcacgacc atcgagctgc ggctcggcag cctgttcgag 50701 ccggtggcgg gggagcggtt cgaccacatc gtctcgaacc cgcccttcgt catcaccccg 50761 cgcgcggagg gcgtgccggc ctacgagtac cgcgacgccg gcctcgtggg cgacgcgctg 50821 gtcgagggcg tcgtcgccga cctcgcggac cacctcacgc ccggcggcat cgcgcagctc 50881 ctcggcaact gggagcaccg cgccggggag cccggcctcg agcgcgtcgc ggggtggctc 50941 gaccgggcgg ccgcgcgcac cgggtccggc ctcgacgcgt ggatcgtcga gcgcgaggtg 51001 caggacgccg cgctctacgc cgagacgtgg atccgcgacg gcggcacccg cgccggcacc 51061 cccgagtcgg aggtgctgat ggacgcgtgg ctcgacgact tcgccgcgcg cgaggtggac 51121 gcggtcggct tcggctacct caccctccgc cggccggcag cgggggcgcc gacgctccgc 51181 cgcatcgagc gcctgcacgg cggactcggc aacaacccca cgggcctcgg cgaccacctc 51241 caggcctcgc tcgccgcgca cgacgccctc gccgccgtcg acgaccgcgc gctcgtcggg 51301 ctcgcgctcg tggtgtccgt cgacgtcacg gaggagcggc actactggcc gggcgccgag 51361 gatcccacgg tcatgacgct ccgccagggc gcgggcttcg gccgcgaggt gccgctcgac 51421 acgggcctcg cggcgctcgt cggcacgtgc gacggggagc tcgcggtggg cgccatcgtc 51481 gacgccgtcg cgcagctcac cggcgtggac gcggtcgccc tgcgcgccga gctgctcccg 51541 cgggtccacg ggctcgtcgc cgatggcttc ctcacgctgc cgggaacggc gtccgacgac 51601 gcgctcgccg accacccagc gcgcgacacc taggatcgcg gggtgactcc tcgaacagcc 51661 cgccgcgccg cccgccctga gatcgtccgc gccgtcgtcc tcgacgctgc gctcatcgtc 51721 gtcttcgtgc tcatcggccg ggcgagccac ggcgaggacc acgcgccgtc gggcgtcctc 51781 ggcaccgcgt ggccgttcct cgcgggcagg ctcgtcggct ggatcgtcgc ccgggcctgg 51841 cgcagcccct cgcgcgtcgc gcccaccggt ctcctggtgt ggggcgtgac cgtggtggtg 51901 ggcatggtgc tccgggcgct cagcggcgag ggcgtggtga tcccgttcgt catcacgacc 51961 gcgatcatcc tggggctcct cctgctcggc tggcgcgcgg tctcggccat cgtcgtccgc 52021 cggcgcgccc gggcctgacc ccgccggcca ccccgcctca ggcggcgggc gaggtggggg 52081 cagcagcctc catcacggcg atgagcgcct tcgcgtaggc ctcctcggcc tcgaggtcgc 52141 ggtgctcgat ctcgtggccg tcgatcacga cgagcaccac gtgcgcgccg tcctcggcgc 52201 cgccgatctc gcgccgcagc gaccggaacg ccccggcgag gagcgcgcgc agctggtcct 52261 cgcgcggcag ccacaggctg tcctcgagcg ccacggagtc gagcgcccac tcggtcgtgc 52321 cgttgaaccc gagcacggtc ccggtcgcgt gctcgtgcgc ctcgattgtg agctcgctga 52381 tggtgaagac gtcggactcg aagccctggc cgcggattcg gaaccggtcg ccgggctcgg 52441 ggctccactc gaggccgagc tccaagaggg tcgtggcatg cgcggtggag atcatccgtg 52501 cagtatgccg gtcgctcccg ggcgtcgccc cgcgggcggg ggaatgcgtg tgcattagat 52561 tcgcagggca cggactgcgg acggctcccg ccgccggtcg gccccgggag gaccatgcgc 52621 gcgacagtga aggacgtcgc cgcgcgtgcc ggcgtctccc cgaagacggt gtcgaacgtg 52681 atcaccggcc gcgtcgccgt gagccccgtc acccgcgagc gcgtcgagcg ggcggtcacg 52741 gaactcgact acgtgccgaa cctgtctgcg cgcggcctcc gcaacggccg caccgggatc 52801 atcgccgtcg ccctgcccga cctcagcacg gcgtactcgg cagagctcgc ccaccacctc 52861 gtggaggtcg cgcacgaggc gggctacagc atccagatgg aggagacggg ctcgcggccc 52921 gaccgcgagc gcgacctcat gtcccgtgcg cgcgagcacc tcgtcgacgg cctgatcctc 52981 aaccccgtgc tcctgtcgcg gagcgccatc gcgcgcgccg agtcgctgcc gccggtcgtg 53041 gtgatcggcg aggtcgagca ggagatcgtc gaccgggtcc tcgtcgacag cgtccaggcc 53101 gcgtacgaca tgacgcgctt cctgctcggc acgggcgccc ggcgcatcgc cgcggtcggc 53161 acggccacgc gcgaggagtc cgcggccggc gacctccgcc gcatcggcta ccggcgcgcg 53221 atggaggagg cgggcgaggc gcccgtcgag atcgaccgca cggggtggaa cagcgcgtcc 53281 ggggcggagg cggtggactc ctggctcagc gacggcaacc cgctcccgga cgccctcttc 53341 tgcttcaccg acggcctcgc gttcggcgtc ctgcgggcgc tcgccgacca cggggtgcgc 53401 gtgcccgagg acgtgcaggt cgcggggttc gacgacgtcg accagtcgcg cttctcgatc 53461 cccaccctca ccaccgtgca cttcgacatc cgcgcgtacg cggaggcggc cgtcggccag 53521 ctggtgcgcc ggatcgagga gcgcgacgga ccgcccgtcc agctcgtcat cccgcatcgc 53581 gtcgtcgtcc ggggcagcac gcgcgcatcc gcctgacgtg acaggaccgg tggcctgacc 53641 ccgcggtgac cggccgggag gccgatgccc ggaaacgttg cgctcggcat taaaacgatg 53701 taatgatcgt cgcatcacga aggagtggtc aatggatcct gttacgggaa aggccggggg 53761 acgcccctcg gcatggtcga ggcgtcagat cctcatgggc ggagcggcgg ccctgggcgg 53821 cgcgttcctc gtcgggggcc tctccggctg cgcgccccag gtggcgtcgg ccggcggcat 53881 cgtcgacctg aagtactggc acctgctgtc cggaggcgac ggcatccgca tgacggagat 53941 ggtgaaggag gcgaacgact ccggcggcgg cttcgacgtc acggccaccg tcctcgcctg 54001 gggccagccg tactacacga agctcgccat ggcgtcggtg ggtggccgcg caccggacgt 54061 cgcggtgatg cacgcggcgc gcgtgcccgg cttcgcgccc ggcgggctgc tcgacccgtg 54121 ggacaccgac aggctcgcgg agctcggcgt cacgcaggcg gacttcgagc cgcgcgtctg 54181 ggacaagggc gtcgtggacg ggaagctgta ctccatcgcc ctcgacagcc acccgttcat 54241 cctcatgtac aacacggaca tcgcccgcga ggcgggcgtg ctgggcgacg acgggcagct 54301 cgcggagatc acgtcacccg acggcttcct cgaggcgatg cgcgcgatgc agggcgtgac 54361 cggcgagcac ggcttcagct acggctacct cggcgacggc gcccagatgt ggcgcatgtt 54421 ctacacgttc tacaagcaga tgggcggcga catggagctg cccacgggcg gcgaggtcgt 54481 ctacgaccgc gacaaggcgg tcgcgtcgct cgagtacatc cagaccctgc tcgacggcac 54541 gatcgccacc ccgagcggtg acgcgggcac cgccatcgcc gagttcgcgg gcggcaagag 54601 cggcgccatc gtcaccggcg tgtgggagct gcccaccttc cagacggcga aggtcccgct 54661 cgacgcgatg cccatcccga acctcttcgg cacgccggcg accttcgccg actcgcacgc 54721 gttcgtgctc ccgcaccaga gctcgccgga tccggtcaag cgcgagacga cgtacgcctt 54781 cgtcgccgac ctcctgaaga actcgctgca gtgggcgggg gccgggcaca tccccgcgta 54841 caagccggtc atcgacagcc cggagtacgc ggagctcctg ccgcaggcgc actacgcgaa 54901 cgcggccgag cagatcgagt acgacccggt ggcgtacttc accggatccg gctcggactt 54961 ccagacgtac ttcgccgaga acgtgcagaa cgtgttcctc gggcgccagg aggcgggggt 55021 cggcctcgac gccttcatcc ggcagataaa cgcgctgctc gccaagccca accccctgta 55081 gcgcgcgacc acccgcagcg cgccatcgat ctcgcggtcg ccgcccgtgc gcggcaccgc 55141 accctcttcc cagcgaaacg acgaaggagt ccactcgtga cgacagcagc accgcccacc 55201 ccggtcgctc ccgcggccgg gtcccacgcc ccgcgacccg cggtcggcca gccccgggtc 55261 aaggccaagc agcaggccca gggcatgctc ttcatcgccc cgttcctcat caccttcctg 55321 gtgttcctgg tgtggcccgt cctctacggc ttctaccaga gcctcaccgg gcagagcctc 55381 accggcgcca acagcgagct catcggcttc gcgaactact tcgaggcctt cggcgactcg 55441 cagatgtggc gctcgctcgg caacaccgtg gtcttcacga tcgcgagcac cgtcccgctc 55501 ctggtcgtgg gcctcgtgct cgcgctcctc gtgaacctcg gcctcccggg ccagtggctc 55561 tggcggctgg cgttcttcct gccgttcctc ctcgcgtcca cggtcgtgtc gctgttctgg 55621 ctctggatgt acaacccgca gctcggcgtc gtgaacgcga tcgccggggc gttcggcctc 55681 ccgcagccgg cgtggctcca ggactcgaac ctcgccatga cgagcgtcgt catcacgacc 55741 gtgtggtgga ccgtcgggtt caacttcctc atctacctgg cggcgctgca gaacatcccg 55801 gaccagcagt acgaggccgc cgcgctcgac ggcgccggca agtggcggca gctgttctcc 55861 atcacgatcc cgcagctcgc cccgaccacg gcgctcctcg cgatcctgca ggtgctcgcg 55921 tcgctcaagg tcttcgacca gatctaccag atgaccgcgg gcggcccggg cggctcgacg 55981 cggcccatcg tgcagtacgt cttcgagaca gggttcaccg gcttccgctt cggctactcc 56041 gccgccatct cgtacatctt cttcgccctg atcgtcgtga tctcggtcat ccagttcacc 56101 gcgacccgga ggaagtcatg accaccgcca cccgtcccgc cttctcctcc ggcacgctcg 56161 cccggaagcc cgcgaccagc gtcgccgccc gccagggccg cacggggacg ccgcggttcc 56221 agccgtcgcg catcgccgcg ctcctgatcc tcatcgtcct cgcggccgcg tggctgctgc 56281 cgttcctctg ggcggtgctc acgtcgttca agtcggagac cgacgcggcg gcgttcccgg 56341 tcaccgtctt cccggcgggg ggcttcacgt tcgacgccta cgcgtcggtg ctgaacggcg 56401 gcacgatccc gctgtggacc tggaacagcc tgctcaccag cacggtgatc acggtggtgg 56461 cggtcgtgtt ctcggcgctc gccggctacg cgctcagccg catcgacttc cgcggccgca 56521 agctgctgat gggggcgatc gtggcgtcga tcatcatccc gccgcagatc ctcatcgtcc 56581 cgctcttcta ccagatgctg tcgttcaacc tggtggacac cctctgggcc gtgatcctgc 56641 cgcagatcgt gcagcccgcc atggtgttca tcctgaaggc gttcttcgac cagatcccca 56701 tcgagctcga ggacgccgcg cgcgtcgacg gcgccggacg cgtgcgcgtg ttcctgcaga 56761 tcgtgatgcc gctgtcgcgc cccatcctct cggcggtcgc gatcttcgtc ttcatcggcg 56821 cgtggaacaa cttcctgtgg cccttcatcg ccacgaacga cgcgacgctc atgaccctgc 56881 cggtcggcct gcagacggtg aagaacgcct acgggatcca gtacgcgcag aacatggcct 56941 ccgccgtgct cgccgcgctg ccgctgatcc tggtgttcct cttcttccag cgccagatca 57001 tcaagggcat ctcgaccacc gggttcggcg ggcagtgacc ccgcgcgccg acaccccgac 57061 ccgcaccacc catcccgccc gggacgcacg cgcccgggcc gctcgcgaag gaggacgccc 57121 atgacccgcg cccgcatcac catcgaccgc gacttcacca tcggcgacgt gccccgccgg 57181 ctcttcggct cgttcgtcga gcacatgggc cgctgcgtct acaccggcat ctacgagccg 57241 ggccacccga ccgcgacgcc cgagggctac cggcaggacg tgctcgacct cacgaaggag 57301 ctcggcgcca ccgtcgtgcg gtaccccggc ggcaacttcg tctcgggcta cgactgggag 57361 gacggcgtgg gccccgtcga ggaccggccg cgccggctcg acggcgcctg gcacaccgtg 57421 gagacgaacg cgttcggcct gcacgagttc gtgggctggt cgaaggccgc gggcgtcgag 57481 gtgatggagg ccgtcaacct cggcacgcgc ggcgtcgacg cggcacgctc gctggtcgag 57541 tacgcgaacc acccgggcgg atcgaagtac tccgacatgc ggcggaggaa cggcgccgag 57601 gatcccttcg acatcaagct ctggtgcctc ggcaacgaga tggacgggcc gtggcagatc 57661 ggccacaaga cggccgacga gtacggccgc ctcgcgcagg aggccgggaa ggccatgcgg 57721 ctggtggatc cgagcatcga gctggtcgcg tgcggcagct ccaactcggg catgccgacc 57781 ttcggccagt gggagcagac cgtgctcggc cacacctacg acgtcgtcga ctacgtctcg 57841 ctgcacgcct actactacga gcacgagggg gacgtgcgga gcttcctcgc gagcgccgtc 57901 gacatggact tcttcatcga gtcggtggtc gcgaccgcgg acgcgaccgg cgcgcgcctg 57961 aagagccgca agcgcatcga cctctcgttc gacgagtgga acgtctggta ccagcgcggg 58021 ctcgacggcg aggaccagcc gcaccgcatc gagaaggcag gttggcgcga gcacccgcgg 58081 gtcatcgagg acgagtacag cgtcacggac gcggtggtgg tgggcacgct gctcaactcg 58141 ctgctgcggc acggcgaccg ggtgaagatc gccaaccagg cgcagctcgt caacgtgatc 58201 gcgcccatcc gcagcgagga gggcgggccc gcgtggcggc agtcgatctt ctggccgttc 58261 gcgcggatgg cgcagctcgc gacgggccgg atcctccagg tcgaggtcga cagcgaccgc 58321 tacgacaacg accgcttcgg cacggccgac gtggtcgacg tgagcgcgac ctgggacgag 58381 gaggcgggca ccgtgtccct cttcctggcg aaccgcgggc tcgaggagga cgcgtcgacc 58441 gaggtggcgc tgcgcgggct cgacgccggg cggatcctcc gcgccgaggt cctgcgcgtc 58501 cccgagggcg gcgaccggca cgcgagcaac accctggagt ccggcgagca ggtcgggctc 58561 gtgccgctcg agggcgtgga cgcggagggc gggcgcctga cgctcacgct cccggcgctg 58621 tcctgggcgg tcgtggtgct ggacgtgacc cggagctgac gccggacgca cgacgacggc 58681 ccgccccgcg cgggcggatt ctcgtggtcc ccgcaacacc ctgagttcag ggggttgcgg 58741 ggatcgtggt ttcgggtgag ttgcggcggg agttcttcga ggtactggac cgggtcgatg 58801 gcagcatcac ggctgctgcg gctgtggtcg gggtgagtcg gaacaccgcg tacgggtggg 58861 cgcgcacggc tggtgtgcgt gggcgcggga agtccggtac agcggggcat ccagggcgtg 58921 gcgagtacga gcggctccgc gtggagggga tgtcccggcg ggtagccgcg tcgcgggtcg 58981 gtgtgcatga gcgcactgcg caggactggg accgcggctg gatgaagcgg ggcagtgttc 59041 ggattcatgc tgatggtcgg cggatcgagt acaacaccgg gatggctacc atcacgggac 59101 cgcgtctgcc cgctgtcgac gctgttctgc atccgcggtt cctgaccgtg atcgagcggg 59161 agacgatcgc ggatctgcgc cgtcaggacc tgtcgctgcg cgcgatcggg cgggttctgg 59221 gtcggccggc atcgacgatc aaacgcgagc tcgatgcccg cacggtcgcg gggacctacc 59281 agccccacgc ggcgcaccgg gcctgggcag cgagccgctc tcgtccgaag cgggcgaagc 59341 tcgctcagga cgggccgctg cgggactacg tcgcacgcaa gctgatgctg cgctggtcac 59401 cggagcagat ctcccgcctg ctggttcggg agttcccggg cgaggagagt atgcgggtga 59461 gcacggagac gatctaccaa gcgatctacg tccaggcccg cggcggactg cgccgcgaag 59521 tcgccgacgc gttacgcacc ggccgcaccc gccgcagacc ccgcacccgc ccagagcatc 59581 gcactcaacg gttcgtggac ccgatggtca tgatcgctga ccggcccgcg gagatcgagg 59641 accgggcagt ccctgggcat tgggagggtg atctgatcgt cggcacgagc tcacagtccg 59701 cgatcgtgac tctggtcgaa cgcaccaccc gctacgtcat gctcggccat ctccccggcg 59761 ggcataccgc cgaggaagtc cgtgacgtgc tcgtgccctt gatcagcacc ctgcctgcac 59821 acctacgtgg atcgttgacc tgggaccagg gcgctgagat ggcgagccac cgccagatca 59881 gcatccaggc cggaatcccg gtctatttct gcgatccgca ctcaccctgg caacgcggca 59941 gcaacgagaa caccaacgga ctcctgcgcc agtacttccc taagggcacc gatctcgccg 60001 cccatacctc cgccgacctc gaacatgtcg ctcagcagct caacggccga ccacgcaaaa 60061 cgctcgactg ggacacccca gccgagcgaa tgcgtgctct actgacaacc atctaaatca 60121 tcaggtgttg cgacgaccac gagaatccgc cgatgcgggg gggggcgtcg tcgtccccac 60181 gctcctcctc cccgcctgcc gccgaccggc ccccggatac gattgccctg atgacctcca 60241 cccctcccgc tcccgcctcg accggcggcg gcaccgcgct ggcccccgcc ctcgagcgcc 60301 tcggcacggt cttcgggtac gacgcgttcc gcggcgacca gcaggagatc gtcgagcacg 60361 tcatcggcgg cggcgacgcc ctcgtgctca tgcccacggg cggcggcaag tcgctctgct 60421 accagatccc gagcctcgtc cgcgagggca ccggcgtcgt catctcgccc ctcatcgcgc 60481 tcatgcagga ccaggtcgac gcgctgcgcg ccgtcggcgt ccgcgccgcg ttcctcaact 60541 ccacgcagga cctcgagacc agccgcgagg tcgagcgcgc cctcctcgac ggcgacctcg 60601 acctgctcta cctcgcgccc gagcgcctca tcctcgaccg gatgggccgc ctcctcgacg 60661 aggcgcgcat cgccctgttc gccatcgacg aggcgcactg cgtctcccag tggggccacg 60721 acttccgcaa ggactacctg gcgctgtcga tgctccagga gcgctggccc gaggtgccgc 60781 gcatcgcgct caccgcgacg gccaacgagg ccacgcacgc cgacatcacc gcgcgcctcg 60841 gcttggagga cgcgcgccac ttcgtctcct cgttcgaccg gccgaacatc cgctaccgca 60901 tcgtgcccaa ggccgagccg cgcaagcagc tggtggacct catccgcacc gagcacgcgg 60961 gcgacgcggg catcgtctac tgcctctccc gcaagaccgt cgagcagacg gccgaggcgc 61021 tgaacaagca ggggatcacc gcgctgccgt accacgcggg cctcgacgcc gccgtccggc 61081 agcgcaacca ggcccgcttc ctccgcgagg acggcatcgt catgtgcgcc accatcgcgt 61141 tcggcatggg catcgacaag cccgacgtgc gcttcgtcgc ccacatcgac ctgcccaagt 61201 ccatcgaggg ctactaccag gagaccgggc gcgcgggccg cgacggcctg ccgtccaccg 61261 cctggctcgc ctacggactg caggacgtcg tgcagcagcg tcgcatgatc gaccagtccg 61321 agggcgatgc gcagcaccgc cgccggctgt cgcagcacct cgacgcgatg ctcgcgctct 61381 gcgagacggt cggctgccgc cgggtgcagc tcctgcgcta cttcagcgag gagacgggtc 61441 cgtgcggcaa ctgcgacacg tgcctcgaac ccgtcgagac gtgggatgcg acggtgccgt 61501 cgcagaagct gctgtccacc gtcgtgcggc tgcagcgcga gcggaaccag cgtttcggcg 61561 cggcgcacct catcgacatc ctgctcggca acgagaccga ccgcgtccgc cagcaggggc 61621 acgaccagct cgccacgttc ggcatcggcg gcgagctcac cgacgtgcag tggcgcggcg 61681 tggtccggca gctgctggcc cagggcctcc tcggcgtgag cgacgacggc tacggcaccc 61741 tcgtcatcac cccgggcagc ggcgacgtgc tcaccggatc ccggcaggtg cccatgcggc 61801 aggagcccga acgcatcgtg cgcgggcgcg gcacccgcac cacgcgcagc aagggcggcc 61861 aggtggtgga cctgcccgag gaggcgcagg gcctcttcga ggagctccgc gcgtggcgct 61921 ccgagcaggc caaggagcag ggcgtgcccg cgtacgtggt gttcgccgac gtcaccctgc 61981 gcgaggtcgc gaccgtgcgc ccgcaggacc tcggtcagct cgcgggcatc acgggcgtcg 62041 gccagaagaa gctcgacacg tacggcgagg ggctgctcgc ggtcgtcgcc gccggatccg 62101 tcgcggccga ctagcgcgtc ggccgaccag ggcgccggcc gatgggggct tcggcagacc 62161 agggcgaccg tcggccggcc cggggcgggg aggagacccg gtcccgagcc tcgagggctg 62221 cgggaccgag ccgcgctcac ggccgacttt tacccgaaga ccggcccggc gctggcggga 62281 cagctcaccc gaagagctgt cgccgttgcc cacgatcgta ctggtccggc tgcgcgctcc 62341 tcgcgggctg tggggagcgg acgcggcgtg ctagcgggat gctccggagg cggccgggcg 62401 atcggacccg catgtaaaca gcgtgtaacg ggaggccgca aacgcttcat cgggattgcc 62461 aacaccgtat ggcgtatttg taatatgtca cctaccaccg gctgctcgag gccggacgag 62521 ggagcgccat ggcagtgacc ggagcagatg cggatgctat ccgcacgggc gcgcgccgcg 62581 gggccgtcct ccccaccacg ggatcccgca gcccgctggg cgccgatgcc gtcaccctcg 62641 gcggcggcct gctcggggcc tggcaggagc gcaaccgctc ccgcaccatc ccccacgcca 62701 tcgcgtcgat gaccgccgcc ggcaacctcg acgacctccg tgcggtcgtc gacgggccgg 62761 gcgagcggcc cgcgccgcgc tacccgttcc tcgacaccga cgtctacaag accctcgagg 62821 gcatcgcctg cgaggtcggc cggggcaccg cgagcgccga gatgcgcgcc ttcctcgccg 62881 aggccacgga cgtgctcgag cgcgtgcagg cggaggacgg ctacatcggc tcgtacgtgc 62941 agcggcccgg atccgagcgc gcgccctggt ccgacctcgc ctggggccat gagctctaca 63001 acctcgggca cctcatccag gccgcgatcg ccgactcccg ccagggcggc gacggccggc 63061 tcctcgccgt ggcgcgccgc ttcgccgacg ccgcggtccg cgcgttcgga ccgggcggac 63121 gcgtcgaggt ctgcgggcac cccgaggtcg agatggcgct cgtcgagctg ttccgcgaga 63181 cgggggagcg ggcgtacctc gacctcgccg ccgcgttcgt cgaccgtcgc gggcacggca 63241 cggtggcgac gcggatcttc cccgccgagt acttccagga cgcccacccc ttccgtgaga 63301 tgcccgccgt cacgggccac gccgtccgca tggcctacct cgccgccggt gccacggacg 63361 tggccctcga gacgggcgac gacgagctgc tcgccgcatc cgtccgcctg ttcgacgacg 63421 cggtgcgcac gcggctctac gtgacgggcg gactcggcag ccgccactcg gacgaggcga 63481 tcggcgacgc gtacgagctg ccgagcgagc gctcctacag cgagacctgc gccgccatcg 63541 ccgtgatgca gtgggcgtgg cgcctcttcc tcgcgaccgg cgagccccgc ttcctcgaca 63601 cgcacgagac cgtgctgctg aacgcctacg cggtgggcct ctccgccgac ggcacgggct 63661 tcttctacga caacccgttg cagcgccgcc ccgaccacca cgcgcagtcg ggcgccgaga 63721 ccgagggcga gctgatgcgc cgcccgtggt tcacctgccc gtgctgcccg ccgaacatcg 63781 tgcgctggat gagcgagctg caggaccacg tcgcggtgca ggacggcgac gacctcgtga 63841 tcgcccaccc gaccgcgtgc gtgatccgca ccgacgcgct cgacgtgcgc gtgacgaccg 63901 cgtacccatg ggacggcgcc gtgcgcgtcg aggtgctgcg cgcatccggg gccgagagcg 63961 gcatcgtgct gcgtcgtccg ggctggtgcc ggtccgcgac cgcggtcgtg cagggggtcg 64021 acggatccgt cgccgaggtc gacgcatcgg ctcccgatcg gtggatccgc gcctcccgcg 64081 cctggtccgc gggcgacgcg ctcgtggtag agctcgacat gcccgtgcgc gccctcggct 64141 cccacccgca cctcgacgcc acccggggga ccctcgcggt ggcgcgcggc ccgatcgtct 64201 tcgccgtcga gcaggaggac gccggcgcac ccgtcgacga cctgctcctc gacccgcgcg 64261 acctggcgga ggcacggacc gtgccgctcc cgctcgccgc gccgtggggt cctgcgtcgg 64321 acgcggcaac cgccgccgac ccgggcgtcg cgctcgccgt gcgcctccgc cgcgcgctcc 64381 ccgcgccgga cgagctctac cccgaggtcg tccccggaac cgcagctccc gccgcgtcgg 64441 ccgatcccgt cgacgccgtg ctcgtgccgt acgccctgtg gggcaaccgg tcgccgggcg 64501 cgatgcgggt ctggatccgc gccgccgaca ccggctgagc cgccgtccgc gcgcacgcca 64561 cccggatcca cccgatccgg ggcgatggcg cgcacctccg cttcccatcc cctcccatcg 64621 cacgaccccg tccgtcattc cccacccggt gcgcctcggc cgccatccac gaaacgagag 64681 tccgatgaac agacgaatca ccgccgtcgg gctggccgtc gccgccagcc tcgccctcac 64741 ctcctgcgcc ggcgccggcg gaggagccgc ggcaggcggc gtcaccggtc ctgccgacac 64801 cggcggcacc atgcaggtgc tcgccagcac cgacttctcg catctcgacc cggagatggg 64861 ctacgacacc ggtgtccagg acctctaccg gctcatctac cggacgctca ccaccgcgac 64921 cggcaaggac ggcgccacga tcgggccgga cctcgcgacc gacacgggca cgcccaacgc 64981 cgacgccacc gtgtggacgt tcacgctcaa ggacggcctc aagttcgagg acggctcacc 65041 catcaccagc gagtccgtca agttcggcgt cgagcggtcc ttcgacccgg cgctcgcgat 65101 cggcacgccg tacacccggc tctacctggc gggtggcgag tcgtacaagg gcccctacca 65161 gtcgggcgac ctctcctcga tcgagacgcc ggacgagaag accatcgtct tccacctgaa 65221 ccgctccgtc ccggagttct cgagcgtcgc cgcgcagagc accttgacgc cgttcccggc 65281 cgacaaggac aaggtgacgg tcacgagcat ggaccagcag cccatcgcgt ccgggccgta 65341 ccgggtcacc gcccgcacgg ccggctcctc cctcaccctc gagcgcaacc ccgagtggga 65401 ccagtcgacc gacggtgtgc ggacggccaa gcccgacaag tggcagttca ccgtgggcct 65461 cgaccaggcg accatcgacg agcgcttgct cgccaaccag ggcgacgaca agaacgcgat 65521 cgcgtacacg atcaccgcgg cgagcgtctc ccgcatccag accccgcaga tcaaggcgcg 65581 cacggtcacc ggcgaccagg cctgcaccac gtacctcggc ctcaacacga ccaagccgca 65641 cctcgacgac gtgcgcgtcc ggcaggcgat ctcctatgcg atcgacaaga agtcgctcgc 65701 cgacgtcgcc ggcggcccgt ccatcgccga gcccgcgtcc acgatgctca ccccgtccat 65761 cccgggccac aaggacttcg acctctaccc gagcaccgac agcgcgggtg acgtcgacaa 65821 ggcgaaggcg ctgctcgctg aggcgggcgt cccgcagggc ttcacgatga ccctggacgt 65881 gcgcaacctg ccctccgcgc agaagcaggc cgaggcgctc cagcagtcgc tcgccaaggt 65941 gggcatcacc gtcgagttca acatcatcga cacggcgacc tactacgaga ccatcggcac 66001 cccctcgcag cagcacgacg ccgccgtcac cggctggtgc ccggactggc tgtcgcccag 66061 cacggtgctc ccgacgctgt tcgacggacg ccagatcagc gacaagggca acaacgacct 66121 ctcccagctg aacgatgccg cggtcaatgc caagatcgat gaggtctccg ccatgacgga 66181 cctcgacgcg gcgaagaccg cgtgggggga cctcgacgag cagatccagc agctcgcccc 66241 gaccgtgccg ctcctcttcg cgcagtccgt gctcgtcgtc ggcgagaacg tgcggaacgc 66301 gtactcgagc cccctgttcg cgggcggcat cgactacgcc accatcggcc tccacacggg 66361 gaagtaggcg gtgaccgcca ccctccaggg cgccagcgcg cccgacacgg cctccgcgta 66421 cccgacggga cggccgcccg ccgtcacgcc ggcgaagcgc gtggtcgcgg ccctccggtc 66481 gacgccgtcc gtcatcgcca gcgccgtgtt cctggtgctg gtcctggtgc tcgcggtgtt 66541 cgcgccgctc ctgtccggga tcaccggctg gggccccacg accttcgacg cgacggccgt 66601 cgaccccgtc ctcggcggtc tgcccatcgg cccgttcggc ggcgtcagcg cgcagcactg 66661 gttcggcgtc gagccgcaga acgggcgcga catcttcgcc cggatcgcgt acggcgcccg 66721 ggtgtccatg ctcatcgcgg tctccgcgac ggtcgtcacc acggccgtcg gcgtcatcgc 66781 ggggatggtc gccggctact acggcggcat cgtcgaccag atcgtgtcgc gggtcatgga 66841 cttcctcatg gcgttccccg cgctgatctt catcatcgcg gtcctgtcgg ccctgcccgc 66901 gggcaaccgg ccggcgctgc tcgtcctggt gctcagcgtc ttcggctggc cgtacacggc 66961 gcgcatcgtg cgcggccaga ccatgacgct ccgcacgcgc gagttcgtgg aggcggcccg 67021 ggcgtccggc gcctcctccc tgcgcgtggt cttccgcgag gtgctgccga acctgcgcgg 67081 caccatcatc gtgctggcga cgctctcggt gccgggctac atcggcaccg aggcgtccct 67141 gtcgttcctc ggcgtcggcg tgctgccgcc gacgccgtcg tggggccaga tgatcgccga 67201 ctcggtgaac tggtacacgg tcgacccggc gtacttcatc gtgccgggct cgttcctctt 67261 cgtcacggtg ctgtcgttca cggtcttcgg cgaccacctc cgcaccgcgc tcgagcaggg 67321 ggaggcggca tgatcggcta cctcctccgc cgcgcgggcg ccgcggtcat cgtgctcgcg 67381 ctcatcagcc tgttcaccta cgcgatcttc ttcctgctgc agccggaccc cgccgtcacc 67441 atctgcggca agacctgcac gccggacaag atcgactcca tccgcgccct cctcggcctc 67501 gaccggccct tctgggtgca gtacggcgac ttcgtcacgg ggctgttcac gggccgcacc 67561 tacggcgacg gcccgacggc gatccagtgc acggcgccct gcctgggctt cagcttccag 67621 acccagcagc ccgtgctcga cctgctgctg tcgcgacttc ccgtgagcat caccgtcgcg 67681 gtcggcgcgg cggtcctctg gatcctcttc ggcgtggccg gcggcctcgt cagcgcgatc 67741 aagcagggca gcgtgtggga ccggaccgcg atggccgggg ctctcgtcgg catcagcgtg 67801 ccggtgccct tcgctgcgct gctcctccag tacgtgctcg tcgtgcagct gcaggtgctc 67861 ccgttcccgc agtcggtggc gttcagcgac gacccggtcg ggtggttcga gtcgtacatc 67921 atgccgtgga ccgtgctcgc gctcggctac gcggccgtgt acgcgcgcat cgtgcgggcc 67981 aacgtgatcg acaccctgca ggaggactac ctgcggaccg cgcgcgccaa gggcctgtcg 68041 gccgcgctcg tgatccgtcg ccatgccctc cggccgtcgc tcacgcccgt cgtcacgttg 68101 ttcggcatgg acttcgccgg gctgctcggc ggggccgtga tcgccgagag catcttcggc 68161 ctcaacggcg tcggcaaggt cgccgccgac tccatcgcca agaacgacca gcccgtcatc 68221 atgggcgtca cgctcctcgc cgcggccttc gtggtcgtcg ggaacgtcgt cgtcgacgtg 68281 ctctacaccg tgctcgaccc ccgagtgagg atcaccgcgt gaccgccaca gagacgcacc 68341 gcccgcccgc ccgcgccgtc cccgggacgc cgctcctcga ggtggagcac ctcaccatcg 68401 cgttccccac gtcgcgggga ccggtcgagg tcgtgaagga cctctccttc cgcgtggagc 68461 cggacagcac cctcggcatc gtgggggagt ccggatccgg caagtcgatg acctcgctcg 68521 ccgtgatggg cctcatcccg cgcggcggca cggtcaccgg atccatcaag ctggccggcg 68581 aggagctcgt gggccgcacc gaccgggagc tgcgggccat gcgcggcgac cgcatggcga 68641 tggtgttcca ggatccgctc tcctcgctca acccctacta cacggtgggg ctgcagatcg 68701 aggaggccta ccgggcgcat cgccccggct cccggaaggc cgtgcgctcg accgtggtgg 68761 cggcgctcga gcgggtcggg atcaaggagg ccgcgacgcg cgtggaccac tacccgcacc 68821 agttctcggg cggcatgcgg cagcgcatca tgatcgcgat ggcgctgtgc ctcgagcccg 68881 agctgctcat cgccgacgag ccgaccacgg cgctcgacgt gacggtgcag gcgcagatcc 68941 tcgacctcat gcgctccatc cgcgccgaga cggggatggg catgctcgtc atcacccacg 69001 acctcgcggt ggtctcgtcg ctggccgacg aggtgctcgt catgcagcac gggcaccgcg 69061 tggagagcgg caccaccgag cgcgtgttca ccgcgccgga ggacccgtac acgcacgccc 69121 tgctcgaggc gatcccccgc atcgacgccg cctacgaccg cctgacgacg ggacccgcct 69181 catgagccca cacgacgcat ccgcccccgc gcccgccccg accgccacag cggcgacgcc 69241 cgagcccttc ctctccgcgc gcgacctcac caaggagtac gtgacgcgcg gcggccgcgg 69301 gctccggccg cccgtgcggc gcttcctcgc ggtcgacggc gtgagcctcg acgtgccgac 69361 cgggcagacc ctctccatcg tgggcgagtc cggatccggc aagtcgacga ccgcgcgcat 69421 catcgcgcac ctgctcgacc cgacctccgg cacgttcgcg ctgaagggcg aggacatgac 69481 gcacgcgaag ggcgccgccc tccgcgagtt ccggcggcag gtgcaggtgg tgttccagga 69541 tccggcgtcg tcgctgaacc cgcggcacac ggtggagcag atcatcagcg cgcccctgcg 69601 gtaccagggc atcacgacgc cgggcgggca cgggcagctc gtgcgcgacc tgctcgaccg 69661 ggtgggcctc aaccccgacc acgcgcagcg ctatcccgcg cagttctcgg gcgggcagtg 69721 ccagcgcatc gggatcgcgc gggcgctcgc cgtgagcccg ggcctcatcg tgtgcgacga 69781 ggcggtctcc gcgctcgacg tcacggtgca ggcgcgcgtc atcgcgctgc tccgcgacct 69841 ccagcgggag cgggggctca gctacgtctt catcgcgcac gacctcgccg tcgtgcggca 69901 gctctccgac cgcgtcgccg tgatgagctc ggggaaggtc gtggaggagg gtacgcgcga 69961 cgacgtgttc gagcgcccgc agcacccgta cacgcggtcg ctgctcgacg ccgtgccgcg 70021 catcgacccc gagtgggatc gcaggcggca ggccgcgcgc gccgcggccg gcctcgacac 70081 caccgccatc gagacggcgg gcgggtcggc cgcgtgatcg tcggatccgc caccgtcccc 70141 ggcgtccacg tcaccgacca cgagatcgag gtcccgctcg actgggaggc ggcgcgcgcc 70201 ggcgagccca cgtcgaccat cacggtgttc gcccgcgagc tcgtcgcccc cgaccgccgc 70261 ggcgacgacc tgcccgcgct cctctacctc cagggcggcc cgggcgggaa gtcgccgcgc 70321 gtgctcgacg acggcggctg gatcggccac gccctccgca cgcaccgcgt cgtgctcctc 70381 gaccagcgcg gcaccgggcg gagcacgcca gtgacggcgc gcaccatgat ccggttcggc 70441 gacgaccacg ggtcggctgc ccggtacctc gcgctcttcc gggccgactc gatcgtgcag 70501 gacgccgagg cgctccggca gcacctcgag ggcgggcgcc gctggtcgac gctcggccag 70561 agctacggcg ggttcctcac gctcacctac ctgtcgctcg cgcccgaggc cctctcggcc 70621 tgctacgtga ccggcgggct cgcctcgctc gaccccgacg ccgaggaggt ctaccgccgg 70681 acctacccgc gcacggtccg gaagaacgcc gggtaccacg cgcgctaccc gggcgacgtg 70741 gggatcctgt cccggctcgc cgaccggctc caggtcggcg acgtgtcgct gcccgacggc 70801 gacgtgctca cggtccggcg cctgcagacc atcggcatcg acctcggcat ggcgccgggg 70861 agggagcgga tccacgcgct gctggacgag gcgctcgacg accgcggcga gcccaccgac 70921 gtgctgctcg ccgaggtgct gcgcctcacc tcgtacgcgg ggaacccgct cttcgcggcg 70981 atgcaggaga gcatctacgc gtcaggcacc cggcccgcga ccgcgtgggc cgccgagcgg 71041 gagcgcggcc gtcacccggc gttcgcgccg accgcccggc cgctgctgct caccggcgag 71101 atgatgtacc cctggatgtt cgacgagatc cggctgctgc gcccgttccg cggcgcggtc 71161 gaggagatgg cccgtcgcga cgactggccg gagctctacg acccggcccg gctcgccgcc 71221 aacgaggtgc ccatcgccgc cgcgatctac cacgacgaca tgtacgtgga cgcgcggctg 71281 cagcaggaca cggtcgcgcg cgtgggcaac gcccgcgcgt ggatcacgaa cgagcacgag 71341 cacgacggcc tcggagcgcc cggcgtgctc gggcgcctga tggacacgat cgcccgcgat 71401 ggaggagcac tgccccgatg accgacacga cccccgacac cgaccccggc gcggcgcgcg 71461 tcccctccac ccccgaggac cgccgcccgc cgcgcctcgc ggagctgccc gccttccagg 71521 acctcatggc gggcggctgg atcacgcccg accgcacgcc gacgaccgtg cccggcgcgg 71581 tcgaggccgg ggcagcgcac cgcgcccggc tgagcgccgc gatgcccggc gtgaccctcg 71641 cggtggtgag cggctacgcg cccacgcgca acgacgactg ccgctacgcg ttccgcgccg 71701 acagcgactt cgtgtggctc accggcgtgc agatcgaggg cgccgtgctc gtgatgcacg 71761 cggtcccggg cggccacgac gcggtcctgc acgtgcccgc gcccgcgcat ccgggggatc 71821 cgcgcttcta ctccgacgcc gaccacggcg agctctgggt gggccccgcg cccgcgcacg 71881 ccgactggca ggccgcgctc gggatccccg tgcgcgaccc cgaccgcatc gcgcgcgacc 71941 tcgcgggcgt ccgcgacgtg cgccgggcgg gggccgtcac gggcgtcccg tcggcgctcg 72001 ccgacgtgcc ccgcgatccc gcgctcgtcg cgacgctcgg cgagctgcgc gtcatcaagg 72061 acgcgtggga gatcgaggag ctgcgccgcg cggtcgacga caccgtggag ggcttcgccg 72121 aggtcgtgcg cgcgatcccg cgggcgcggg cgctcggcgg cgagcgctgg ctgcagggca 72181 ccttcgaccg gcacgcgcgc acggtcggca ccggccccgg ctatgccacc atcgtgggcg 72241 gcggcggtca cgcgacgacc ctgcactggg tgcgctgcga cggcccgatc cgcgacggcg 72301 agctcgtgct gctcgacatg ggcgtggagg ccaggagcct ctacacggcc gacgtcaccc 72361 gcacgatccc cgtctccggc accttcacgc ccgagcagcg gctcgtgcac gacgtcgtgg 72421 agcgcgccca ccgcgcgggc ctcgacgccg tcgcgcccgg gcgcccgctc gtcgacttcc 72481 accacgcgtc catggaggtg atcgcccagg gcctgcacga catggggatc ctgcccgtct 72541 cggtcgacga ggcgctctcg cccgccgggc agcaccaccg ccgctggctg gtgtgcggga 72601 tcgggcacca cctcgggctc gacgtgcacg actgctcggg tgccggggtc gccggatacg 72661 accgcgcggt ggaggcgggc atggtgctga ccgtggagcc cggcctgtac ttcgcgccgg 72721 acgacgggat ggtaccgccc gagctccggg gcatcggggt gcggatcgaa gacgatatcg 72781 tggtgacgca gacggggtcc gacgtgctgt cggacgcgct gccgatcgac gcccggggcc 72841 tggagtcctg gatgcatgag cagcggtccc cgtcctgacc ccaggaggag gacccgcgtg 72901 agcctctccg ctctgcgtcc cgcacccccg cgcgagagcc tgcgcgagca cgtgcaccag 72961 gccctgtccg cggccatcgt ctcgggcgag ctggagccgg gcacgctgat caccgtgccc 73021 acgctcgccg tgcgcttcga cgtctcggcc acgcccgtcc gcgaggcggt gctcgagctg 73081 gagaagcgcg ggttcgtcga gacggtccgc aacaaggggt tccgcgtcac ggccgtgagc 73141 gacgaggagc tcggccacct ggtgcaggtg cgccagctcc tcgaggcgcc ggccatggag 73201 cggctcgccg ggcagctccc ggacggcgcg ctccccgggc tcgaggcgct cgccgaccgg 73261 atcgagcagg gcgcgcgcga cggcgacctc cgcgcgtacc tcgaggcgga ccaggagttc 73321 cacctgtcgc tcacgcgcat gctcggcaac cccgtgctca ccgacgctat cgccgacctc 73381 cgctcgcgca cccgtctcgt cgggctcgcg tcgatgaagg agagcagcct cctcgacgcc 73441 tcggccgccg agcaccacga gctcctgcgg gcgctggtcg ccggcgacgg gaccgcggcg 73501 cacgagctga tggtgcggca catccgccac gccagcgggt ggtgggcgcg gcgaggacga 73561 gtcggccggg gacgcgggcg ccgtcccggt ggatccctcc gacgcctgat ccgcgcggcg 73621 gtcgctgcca tttcccatca tgggcgatgt gtgacacatt actgtcaccg cccaccacca 73681 tcgccgcctc ctcgaggcgc acccacccgt gagagcaggg acaccatgac gcgtcacgtg 73741 gtcgtcgtgg gcgggggcat cgtcggggcc gcgtgcgccc ggtcgctcgc ccgggcgggg 73801 atccgcgtca ccgtcgtcga gcgcgccgcc gtcgcctccg gcacgagcgc gcagggcgag 73861 ggcaacatcc tcgtgtccga caagggcccg ggcgcggagc tcgagctcgc gcagctggcc 73921 gcccgccgct ggcccgaggt cgccgcggag ctcgcggacg agctgggcga cgcgctcccg 73981 tccatcgagt acgagcccaa gggcgggctc gtcgtcacga ccaccgacga gggcgcggat 74041 ccgctgctcg ccttcgccgc cacccagcgc tccgcgggcg tccaggccgt gcccgtcgac 74101 cgccgtcggg ccctcgagct cgagccgtgg ctcaacccgg cgatcaccgc ggccgtgcac 74161 taccccgagg acgcgcaggt gcagcccgcc atcgcgacgg aggcgctcgc cgcgtcggcc 74221 cggcgcgccg gcgcggtcgt gcggacgggc gtcgaggtcg tcggcccgat cctcgacgcg 74281 gacggcgccc tccgcggcgt gcggacgagc gcgggcgaca tcgccgccga cgacgtgctg 74341 atcgccgcag gcccctggtc gggcgaggtg gcccgcgcgc tcggcgtcga gctgcccgtg 74401 ctgccgcggc gcggggtcgt gctcgtgacc acccgcatgc cgcaccgcat ccggcacaag 74461 gtctacgacg gcgactacgt gggcgcggtc ggatccggcg acggcgcgct gcagacctcg 74521 ggtgtcgtgg agtcgacgcc gtccgggacc gtgctcatcg gatcgagccg cgagcgcgtg 74581 ggcttcgacg cgtcgctgcg cgtagcggtg ctcgaggagc tcgcggcgaa ggccgtgcgg 74641 ctcttcccct tcctcgtgga ggcgaacgcg atgcggtcct acggcggctt ccgtccgtac 74701 ctacccgacc acctgccggt cgtcggcccg gatccccggc tgcccggcct ctggcacgcg 74761 agcgggcacg agggcgcggg gatcggcctg tcggtcgcga ccgccgacct gatcgccgcg 74821 cagatgacgg gcgagacgac cccgctcgac gtgcggccct tctccgtcgc gcgcgcgtcg 74881 ctcgggctgc tgatgcccgg ggccgccgcg cccggcgccg cgctgccgac cgccgccgcc 74941 ggggtgcgcg catgacgccg cggcgcgtgg atcctgcgcg cgacccgatc cgcccggcgc 75001 cggccgcggc cgtgcggttc accgtggacg gggatcccgt caccggcgtc cgcggccaga 75061 ccatcgcggg tgcgctgctc gcctccggca ccctggcgtg gcgcacgacc gcgagcgcgg 75121 gccgcccgcg cggggtcttc tgcgggatcg gcgtgtgctt cgactgcacc gtcaccgtga 75181 acgggctgcc ggacgtgcgg gcgtgccagc gccgtgccgt cgagggcgac gtggtcgaga 75241 ccgggccggg cgcgagggtg cccgacggga ccgtgcccga cgagcgcgcg ggggaggcgt 75301 cgtgagcggc gcggacggcc ggcggcacgt cgtcgtcatc ggcgcgggac ccgccgggct 75361 cgccgcggcc gtcgccgcgc gcggtcgcgg ggcgcgggtc acgctgctcg acgcgtccga 75421 cgagctgggc ggccagtact ggcggcacct gccggagtcg cggccggcgg cgcgcgagcg 75481 gatcctgcat cacggctggg acgcgttcac cgcgctccgc ggccggctcg cggccgacga 75541 cggctgcgag atcgtgacgg gcgcgcaggt gtgggcgatc gagcggccga cgcccgacgc 75601 cgccgacgct gccgctgccg atgcacccgc cgccgccgct gccgccccct cgccggccgc 75661 cgtcgtccac gtgctcgtcg gccaggtcga cggatcccgc cgcgagcccc tgaccctccg 75721 cccggacgcg ctcgttctcg cgaccggcgc gcacgaccgc acgctgccgt tccccggctg 75781 ggacctgccg ggcgtcttca ccgcgggcgc cgcgcaggcc ctcgcgaagg gcgagcgggt 75841 cgccatcggg gatcgcgtga tcgtcgcggg cgccgggccc ttcctcctcc ccgtcgccgt 75901 gtcgctcgtg caggcggggg cgcgcgtggt cgggatccac gaggccgcgc gcgtgccgtc 75961 cctcgcccgt ggctggctgc ggtcgcccgc cggcctcgcc cgcgcgccgc acaaggccgc 76021 cgagctcgcg ggctacgtct ccgtgctggc gcgccagcgc atcgggtacg ccacgggcag 76081 cgcggtcgtc gccgcgcacg gcaccgaccg cgtcgaggcg gtgaccgtgc agcgcctcga 76141 cgcgtcgtgg gcgccgatcc cgggcaccga gcggcggatc gccgtcgacg ccgtgtgcgt 76201 cggccacggg ttcacgccgc ggctcgagct gccgatcgcg gccggctgcc gcatcggcgc 76261 ccaccgcttc gtcgaggtcg acgcgtcgca gggcgccggg cccgcgggcg tcttcgcggc 76321 cggcgagatc acgggcatcg ggggagtgga ccaggcgctc gcggagggcg aggtcgccgg 76381 gcactgcgcg gcgggcggat ccccggccga cgccgccgtc gcgtccgccg tccgccgtcg 76441 ggcggtcgcg cacgacgtgg ccggccgcat cgagggcgcg cacgggatcc gccccggctg 76501 gaccggctgg ctccgcgacg acacgctggc ctgccgctgc gaggaggtgc ccgtcgggcg 76561 tctccgcgcg accgcccgcg ccgcggaatc caccgacctg cgctccatga agctcgcgac 76621 gcgcgccggc ctcgggatct gccagggccg catctgcggg cggaccgtcg agcagctgct 76681 cgcggcggag gccccggcgt gcggatccgg cgccgacgca cccgcacccg cggcgaccgg 76741 ccccggtacc gaccgccgcc ccgtcgcctc gcccgtgcgc ctcggcgagc tcgccgccgc 76801 gtacgagcgc cgcgacgcgg gacccccgtc cctcgccgcg gccgcgcccg gcgtcgacga 76861 cccgccgccc gccgccgccc cgcccgccga cgccccgccc gccggcgtcg caccgccgcc 76921 cgcgcccccg accacccccg cacctccccg caccaccgac cggaaggaca ccccttgacc 76981 gcacccgccc tggacctcgg aggcgtcgtc gtcgccacca cgctgccgtt ccgcgaggac 77041 gcatccgccc ccgccggcct cgccgtcgac tacgacgcgt acgcggccca ctgcgactgg 77101 ctcatgtcga acggctgccg cggcgtcggc ccgaacggat cgctcggcga gtactcgtcg 77161 ctcaccgacg aggagcgccg gaaggtcgtg caggtcgcgg tcgagaccgt gggcgaccgc 77221 gggatcgtcg tcgccggcgt gcacggcgtc ggctggcacc aggcgaggaa gtgggccgag 77281 atcgcggccg aggacggcgc cgacggcgtg ctcctcctcc cgcccaccat ctaccgggcg 77341 agcgacgacg aggtcgtcga gcactacgcg cgcgtcgacg aggtgggcct gccgatcatg 77401 gcctacaaca acccgttcga caccaaggtc gacctcacgc cgcagctcct ccagcggctc 77461 gacgcgctcg agaacgtcgt ggcgatcaag gagttctcgg gcgacatccg gcgcgtgacg 77521 gagatccagg acctcacggg cctcgacgtc atcgcgggtg ccgacgacct gctgctcgag 77581 tcgctcatca tgggcgccgt cggctggttc gcgggctacc cgaacgcctt cccgcgcgag 77641 gccgtcgagc tgtacgggct cgcgaccagc ggccgcatcg aggaggcgaa ggagctgtac 77701 cgccacctcg tccccgtgtt ccgctgggat tcgcgcaccg agttcgtgca ggccatcaag 77761 ctctcgatcg acgtcgccgg cgagagcacg ggcggcccga cgcgtccgcc gcgcgcgccg 77821 ctgcccgccg ccatcgcgga gcaggtcacg cgcgacacgc gccgcgcgct tgaccacctc 77881 gccgggcgat gatcgacgga tgaggtcctc ccgcgtcttc cacgccgtcg actcgcacac 77941 ggagggcatg ccgacccgcg tcgtcacgag cgggttcggc gtgatccccg gctccaccat 78001 gaacgagcgc cgcctgcacc tcatcgagca cctcgaccac ctgcggctcc tgctcatgac 78061 ggagccgcgc gggcacgcgg cgatgagcgg cgcgatcctg cagccgccca cgcgcgacga 78121 ctgcgactgg ggcgtcctct acatcgaggt gtccggctgc ctgccgatgt gcggccacgg 78181 caccatcggc gtcgcgaccg tgctggtgga gaccgggctc gtggaggtgc aggagccggt 78241 caccacgatc cggctcgaca ccccggccgg gctcgtgatc gcgcgggtcg acgtggagga 78301 cggccgagcc gcctcggtca ccatcgagaa cgtgccctcg tacgtggagc ggctcgacgc 78361 ctcgatcgag gtgcccgggt acggcaccgt cccgtacagc ctcgcgttcg gcggcaactt 78421 ctacgcggtc gtcgagctcg acgcgctggg gctgccgttc gaccgggagc ggcagcagga 78481 gatcctcgcc gcggggctcg cgatcatggg cgcgatcaac gaccaggacg cgccgtcgca 78541 cccggagata tccggtgtcg accactgcca ccacgtcgag ttcctggcac ccgggtccga 78601 cgcgcggctg tcgcggcacg ccatggcgat ccaccccggc tggttcgacc gctcgccgtg 78661 cggcaccggc acgtccgcgc gcatggccga gctgtgggcg cgcggcgagc tcgcggtggg 78721 cgacgagttc gtgaacgagt cgttcatcgg cagccgcttc accggccgga tcctccgcga 78781 gacggccgtc gccgggcggc ccgccatcgt ccccgccatc accgggcgcg cctggatcac 78841 cggcatggga cagtacctgc tggaccccac cgacccgttc ccgagcggct tccggttctg 78901 aaccgcgagc ccccaccgag gagagacatg accccgcacg agaccgcccc gaccaccgac 78961 caggccgtgg atcccgccgt cgccgcgacc gtcgacgccg tcgccgcgcg cgccgcccgg 79021 gccgccgcac ccctcgccgc gctggcccct gctgcccgtg cccgagcgct cgacaccgtc 79081 gccgacgcgc tcgaggcgat ccgccccgag ctgctgcccg tcgccgagcg ggagaccgcg 79141 ctcgcgcccg gccgcctcgc cggcgagctg acgcgcacga ccgtgcagct caagatcctc 79201 gcggccgccg tgcgcgacgg ccgctacctc ggcgcgcgca tcgaccacgc ggatcccgac 79261 gccgcgcccg ccccgcgccc cgacatccgc cggtacctcg tgcccgtggg tccggtcctc 79321 aacttcgcgg cgtcgaactt cccgttcgcg ttctcggtgg cgggcggcga cacggcgtcg 79381 gcgctcgcgg tcggctgccc cgtggtcgtg aaggcgcacc cggggcaccc ggagctgtcg 79441 cgccgtgtcg ccgaggccgc gtccgccgcg ctcgtcgagg ccggcctccc cgagggcacg 79501 ctgcagctca tcgagggcga ggaggcgggg ctcgcgatgc tgcgcgactc gcggatccgc 79561 gccgccacct tcacgggatc gctccgcgcc ggccgcttcc tcgccgacgt cgcagccgcc 79621 cgccccgacc cgatcccgtt cttcggcgag ctgggcagcg tcaacccggt cgtcatcacg 79681 gagcgcgccg ccgccgagcg cggggaagac atcgccgccg ccctcgtggc gagcgccgcc 79741 ggatccgccg ggcagctgtg caccgcgccc ggcatcgtgc tgatcccggc gggccacggc 79801 ctcgacgccg tcctcgcgga ggaggccggc gcggtcgcgc cgcacggcat gctcaactcc 79861 cggatcgcgg agggctacgc gggcgggcgg gccgccgcca tcgcggtcga cggcgtgcgc 79921 ctcgtcgccg agggccgcgc gcccgcgggc gacgacggat ccgtgacccc caccatcgcc 79981 gccgtggcgc tcgccgactt cgaggccgag cgcgaggtgc tgcggcacga ggtgttcggc 80041 ccgttcgcgc tcctcgtcga gtaccccgcg ggcaccgacc tcgccgccct cgccgctcgc 80101 accttcgagg gcgagttgac cgcgagcgtc cacctcggcg agggcgaggc cgacgcggcg 80161 accgccgagc tgatccgcgt gctggccgcc cgcgccggcc gcgtgctcgt cgacgcctgg 80221 cccacgggcg tctccgtcac cgacgcgcag cagcacggcg gaccctggcc cgccaccacg 80281 ctcgaccgcg gcacgagcgt cggcaccgcg tcgctcgacc gtctgctccg cggcgtcgcg 80341 ttccagggcg tcccggacgc gctgctgccc gaacccctgc gcaccgcgaa cccgtggggc 80401 gtgccccagc gggtgagcgc gcgcggcgcc cgcgcctgac gccgggatcc gccgggcgcc 80461 cgccgcgctg gccgcgcgtc cgggctcggc gcgtgctccg ctagccgcag ggccgccccg 80521 ccgctgaggg ttcccacaac ccgcgaccgc ctgccgcggg agcgcgttgg aggcccgcga 80581 cgtgtttttc ggcaggtgga ggatccgtgc atagcgtggc cggtgccggc ggggacgccg 80641 gcgcagacga cggcacggag gatccatggt cgacacggcg gcacgaggac gcaccacccg 80701 cggcacgagg ggacgaggcc ccgccgcggc accgcaggac ggcagcgcag cccccgaggg 80761 ctctccccac gagggcgcgc tccgcgaggc gggcgtcccg gtcgccggcg ccgtggacgc 80821 cgaggtcgcc cgcgagctcg accgcaccga cggcgacgcg ggggtggaca ccggcccccg 80881 cgtcgacgtc gagggcctcg gccgcgtgct cctcgggcgc tgggccgacg tccgccgctc 80941 gtcccgcgag ctgacaagcc gccccgagct gcaccgcatg gagggcctcg acatgcacca 81001 gcaccgggcg cgcgtgagcg agcagctgaa gatcctggtc gagcacggcg gcgtgcaccg 81061 cgcctacccc gtgtccgtcg gcgggctcga ggaccacggc ggcaacatcg cgggcttcga 81121 ggagctcgtg gccgcggatc cgtccctcca gatcaaggcc ggcgtgcagt ggggactgtt 81181 cggctccgcc gtgatgcacc tgggcaccga gcgccaccac cgcgagctgc tcccggggat 81241 catgacgctc gagacgccgg gcgcgttcgc aatgaccgag acgggccacg gatccgacgt 81301 cgccagcatc ggcacgaccg cgacctacga ccccgagacc ggcgagttcg acctgcacac 81361 cccgttccgc gcggcgtgga aggactacat cggcaacggc gccatcgacg gccgcgccgc 81421 gaccgtgttt gcgcagctcg tcacccaggg cgtgaaccac ggcgtgcact gcttcttcgt 81481 gccgctccgc gacgagaccg gcgcgttcct gcccggcgtc ggcggcgagg acgacggcct 81541 caagggcggc ctcaacggga tcgacaacgg ccgcctccac ttcgaccacg tgcgcgtgcc 81601 gcgcgcgaac ctcctcaacc gctacggcga cgtggccgag gacggcacgt acacgtcgga 81661 gatctcgagc cccggccgcc gcttcttcac gatgctcggc acactcgtgc agggtcgcgt 81721 gtcgctcgac ggcgccgcga ccagcgccgc caagatcgcg ctgcagatcg ccgtcaccta 81781 cggcaaccag cgccgccagt tcgtcgcggg cggcaccgac gaggaggtgc tgctcgacta 81841 ccagcggcac cagcgccggc tgatcccgcg catcgcgacc acgtacgccg cgtcgttcgc 81901 gcacgagaag ctcctcaccc agttcgactc cgtgttctcc ggcgcgaccg acacggacgc 81961 ggaccggcag gacctcgaga cgctcgccgc cgcgttcaag ccgctgagca cctggcacgc 82021 gctcgacacg atccaggagg cgcgcgaggc gtgcggcggc cagggcttcc tcgcggagaa 82081 ccggctcgtc gggctccgcg ccgacctcga cgtctacgcg accttcgagg gcgacaacac 82141 cgtgctcctc cagctggtcg cgaagcgcct gctcaccgac gtgaacaagc gcttcgcgaa 82201 ggccgacttc ggggtgctgg cgcgctacgc cgtcgagcag gccgcggatc gcacgctgcg 82261 ctcgaccggt ctgcgcacgc tcgggcaggc gctcgcggac cgcggatcca ccgcccgctc 82321 cgtcggccag ctgcgcgagc cggacacgca gcgcgcgctg ctgacgggcc gcgtcgagac 82381 catggtcggc gagatcgcga ccgcgctccg cgccacccgc aagatgccgc cggccgaggc 82441 cgccgcgctc gtcaaccggc accaggacgc gctcatcgag gcggcccgcg cgcatgcgca 82501 gctgctgcag tgggaggcgt tcaccgaggc gctggatccc gcgtcggaga ccggccgcgc 82561 catggacgac ggcacccgca ggatcctcac ctggacccgc gacctcttcg gcctccgcct 82621 catcgaggag gacctggcct ggttcctgat ccacggtcgc atcagctccg cgcgcgctcg 82681 ggccgtcacg gcctacgtcg accggctcgt cgcccgcctc cgcccgcacg cgcaggacct 82741 cgtggacgcg ttcggctaca cgccggcgca cgtccgcgcg gccgtggcgt cgggcgagga 82801 gaaggaccgc caggacgagg cgcgcgcgta ccgcgacgcc cggatcgccg acggctcggc 82861 gccgcgcatg gagaagagcg agaagaagaa ggggtagcgc ggtcatcccg tcccacggac 82921 gcgcagatgc ccgggtcacc tcacggaggt ggcccgggca tcgtggtgtc gcggtcggat 82981 caggccttga ccttgacctt cgccgcggtg gcggtggcga cggcgttgat gaacgtggcg 83041 tcctgcgcca ggcgcgtgcc gagaccggcg accatcttct cgatgttctc ggtccgggac 83101 ccgtatccga tgatggtctg gaggaggccc tggtagatcc cctcgacgct cttcgtctca 83161 ccgccgttcg acggattccc tgtgtaccac tcggcgcccc tgatggtctg cgagatgaga 83221 ttcgcgtctg cctgcgagat tgccatgctt cctcctgcta atggtgcgtc attgatgcgt 83281 gatgcgggat cgatcgccgt gttgttctga cggatctcga tgtggagatg cggtcctgtg 83341 acatctcccg atgatccgac cgcgcccacg aaggtgcccc cgtcgacctg ctggccgacg 83401 gacaacggcg accgtgacga catgtgcgca tatagggagc gccagttgga gccgtcgctg 83461 tccgggtgtc ggatggtgat gctgtgcccg aaggtgccgg gtccgctgct gtagtcgatc 83521 cgctcgacgg tccccacgcc gatggcgaag atgctggtcc ccgcggccgg cgcgaagtcg 83581 atcccgcggt ggagcgtccg cactcccgtg atggggtgga tgcggtaccc ataacctgag 83641 atcgggcgga cgcgtgtgct gaacgggtgg ttccatgcat tctcggcatt cgcggccgca 83701 acgggttgca gcacctccac gccgaaaagc gcgaccatga acagcgctgc ggtgactatc 83761 tgcctgcgcg tcgcgccggt gcgcggatcg acgatgtcgt ccggccccag cccgtcgggc 83821 gcgtcgaatg attccaattc cttgaccaat ttccccccga atgtctttct cgaaggtatc 83881 cagcgactga gggagaaggc aagcggaatg cggtcctcat cattgcggac gtgaccgcgt 83941 gcggaggatg cggtattcgc gcgcgggatg ccgcgcgcca ggcgggatgg cctcgagagg 84001 cggaggtgcc gcgctacgcg tgcagcgccg catccgcctg gcccgtgcgc cacgacgcga 84061 agcgggccgt gaagcccgcg cgggtgggtg cgcagcagaa ggggccggcg gtcacccggg 84121 cgtcgggatc cagcggcgcg acgcgcacga gccgccacgg ctcgcagtcc acccgggcgc 84181 gcaccgtgag ggcgtcgccc atgcggctcg cgcggatcgt cacgagccgg cccgaccagc 84241 ccggcaccgg ggcgagcgac cagtcggaga cgccgcgcgt gacgaccgcg ccgaggccgt 84301 cctcgccgtc gctgcgctcg atgcccgcct tgatccacgt ctccgcgtcg acccgcacga 84361 agacaccggc ctggtcgaac tgctcgcgga ggtccagcgt gaacgccacc tcgaccgcgg 84421 cgcccggatc caggggcgcg aggagcgcgt gctcggtgtc gtgcacgaag ccgtacgagg 84481 tcgttcgcca ggcgtcgctg ccctcgcggg cggtcacgtc catgccgccg tcgtggatgc 84541 gcacggcctc cggttccgtc gtccatgcgc cccggttcca ggggatgtcg gcgagtgcgg 84601 gggatgcggg ggagtcggtc atgggatgac cgtacgcggc gggcggacgt cagacggcga 84661 ggaggagccg cacggcggcc gacacctccg ccatgaggta gccggggagg tgccccacgg 84721 ggtggggctc gatgagctca cgactgaccg gcccgatctg ggggaccacc gccaccgagt 84781 ccttgtccag ccccgacgcc gctgccggga tgaacacgtt ccccgggaag acttggaggc 84841 gcacctgcga ggtgaacggg atgatcacga tcgtggcgat gccgctctcg ttgatccagt 84901 cgtcctggat gaccagggac ggccggatct tcgccggctc cgaccctcgg ggagcatcga 84961 agccgaccca gacgacgtcc cctcggcgga tcaccactcc gaaccggtcc gcgcgatgcg 85021 ctccgactcg cgcaggaagt cctcgcccgc ggtgggctgt ccgacctcgg cgatggcggc 85081 gtccgcgaga cgcgtcagct ccgccttgtc ggctccctcc agctcatcgg cgagcttctg 85141 cgctgcgaca cggtagaact cggagcgggt catcccgaag cgcttcgcga cacgatcgaa 85201 tctctcgaag tcggtgtcgg ggacggagat ggcggtcttc atgtatgcga gtataaccgg 85261 tcatactcgc gtggtctggc tcttcaccgg acaagcccag cccgcgtccc cgtcagtcgg 85321 ccacgggccg cggatcgccc aggtacggca tgatcgcctc cgcccagtgc gcgtgcatga 85381 cgcggtagga gaagcggtcg cggacgtgca ggcgcgtgcc ggagatgtcg gggtggggcg 85441 cgtagacgat gccgtgcgcc gggtcgtcga gccggctggt ggcgcggttc agccgggtga 85501 cctgggcgag cagcaggttc cgtccgagca tggggatcgg ctggaaccgg tccatgggcg 85561 ggatgcccat cagcacgatc cggcacgcgt cgctggcctg ttcgcggacg cagccgacga 85621 tggcctggat ccggtccgtc cactccgcgg gggacgtggc gacgagcacg tccgggatcc 85681 cgagcgcgac gatcgcgagg tcgagcggac ccgagcggcc ggtcatcagg gcggcggcct 85741 tgcgggcggt catgtcgtag gccgccacgg tctcccactc gacgccgcgc cccgtgcgcg 85801 tggagcgccg ggcggcgacc tgcgcgggca tggccatgcc ggcgaggagc acgccgtagc 85861 cggccacgcc gatgtcgccc aggaagagca cgcgctccgg atccggaccc gggatcgagg 85921 acacgtcgtc gtgcggcggg aagatcgccg cctccatgtc gcgcatgtag agcgcgagat 85981 ggagccggag ggtggggcgc gccacggcga gggccgcgat cgaggcgagc ggcatcacgg 86041 ctcgcccggt cgtccgcgcg gcggtgcgcg tcgtcgagcg cctcacggga agggcgggca 86101 atgggtcctc gtctccgggc ggcgatgggg cgatgtgtgg aaggctacgc ggcgcccggc 86161 ggcccgccca gctccgcccc ggatcggggg caccgccgcc cgtaggctcg tcgcatgcag 86221 agcctcttcc ccgagatcga cccgcacgac accggcttgc tcgacgtggg ggacgggcag 86281 ctcctccatt gggaggtctc gggcaatccc gacgggatcc ccgtcgtctt cctgcacggc 86341 gggccgggcg gcggcacgag cccgacgcac cggcgcctct tcgacccggc gaggtaccgc 86401 atcgtgctcg tcgaccagcg cggctgcggc cggagcacgc cgcacgtgtc cacccccgag 86461 gcagacctgt ccgtcaacac cacgtggcac ctcgtggccg acatcgagcg gctgcgcgag 86521 cacctgggag tggagcggtg gctcgtgttc ggcggatcct ggggctcgac cctcgcgctc 86581 gcctacgcgg agacgcaccc ggcccgcgtg accggcctca tcctccgcgg catcttcacg 86641 ctgcgggcga ccgagctcga ctggttctac gaggggcccg ccggcatggt ctaccccgac 86701 ggttgggagg cgttcacggc gcccgtgccc ggggtggagc gcggcgggat catcgcggcg 86761 tacgcggcgc tgctcgcgga tcccgacccc gcggtgcacg ggcccgcggc ggtcgcgtgg 86821 agcacgtggg aggcgtcggg catcacgctg ctgccgaagc ccgacgtggt cgcgcgcttc 86881 gcggagccga cgtacgcgct cgcgttcgcg cgcatcgaga accactactt catgcacggc 86941 gggtggatgg aggacgggca gctgatccgc gacgcgcacc tgctccgcgg catcccgacc 87001 gagatcgtgc agggccgata cgacatgtgc acgccggccg cgaccgcgtg ggacctgcac 87061 ctggccctgc ccgaggcgcg cttcacgatg gtgccggacg cggggcacgc gttcgacgag 87121 ccggggatcc tcgacgcgct gatcgaggcg accgagcgcg cggcggaccg gctggcgccc 87181 acgagctgac cgggcggagc gccgaaccgg gcggagcgcg gatccgccgc cgggtccggc 87241 tccgccgccg ggtccggcct agcggctgac gagcgtcgac agggcgtgcg acgccggctg 87301 cgcgagcgtc gccgcggggg ccgccgcggg cgcgccgacg ccgctcagga tgtcgagcgc 87361 gcgccgcagc cgggtgctgg aggtgtgcat cgtgtacggg aagtacacga cctccacgcc 87421 gacggccgcg aactcggcct ccaggcgctc gcccttcggg gtgccgcgcc agtcgtcgcc 87481 cttgaagaag acgtcgaagc ccacctcgcg ccaggtgtcg agcttgtccg gcagggtctc 87541 cgcgcgggcc tggtcgacgt agctgatgtg gctcacgatc tcgaggcgct cggcgagcgg 87601 caccaccggc gtgatgccct tgttgcgctc gagcatctcg tcggagacga cgcccgcgat 87661 gaggaagtcg caccggctct tggcgtgctt gaggatgttg aggtgtccga cgtggaagag 87721 gtcgaaggca ccggcggcgt agccgattcg ggtcatggca cacgtgtctc gggtcgtccg 87781 cggtccgggc gcgggtacgc gcggatgcgg gatcgggtgc agcccggtgc gggtacgccg 87841 ggcgggggcc tcctgctctc gacgacgcgg gtacgtcggc cgccctgggt ggggggcgac 87901 ggggagcggg tggacctccg gcgatcttac gggcgacccg gccggccgcg gaagcgggat 87961 acccgaaagg ggggcatccc ggtgatccag ggggcacgcc cccgtcgccg cggccatgac 88021 ctccgttcgg ggggcacaac agcctgttgc tgagctacat tcgaccaacc ccacctgtct 88081 ggtgggtttt catcggcctg tctgaccggc cgatccgagc gaggacccgc ccgcatgcgc 88141 caccgcaccc cacccaccgg atcgacccgg acacccgacg gatcgacccc cgcccgcacc 88201 gggacggacc ggcacgccgc cgccgcgacc cgcccccgcc ccgcccgcca cctggtcgcg 88261 ctcgccgtgg tcgtcgggct ggccgtcccg gccgtcctcg tcgccccgca ggccgcgagc 88321 gccgcgaccg gccaggacct caccgcgggg acccccgtgt tcaccgactc cttcacccgc 88381 agcgcgaccg ggggatgggg caccgccgcc ggcaccgggg cgtactccta cgacggcgtc 88441 tcggcgttcc gcgccaacgg cacgcagggc gtcatcgacc tcgcccgggc cggcaccgcc 88501 gcgtcggccg ccgtccccgt ggccgctccc gtcgacagcg agacgaccgt ccgcgtgctg 88561 atcccccgcg tccccgcgca gggcaacggc gtctacgccg ggctccagca gcgcgtgacg 88621 ggctcctcgt actaccagtc gagcgtgcgg gtcgacagcg cgggcgacgc gcggctctcg 88681 gtcgtgcgcg tcaacggatc caccgcgggg caggccaccg tggtcggcga caccgtcgtg 88741 gcgcggggcg tcgtgcccgg ccgcgtcgtg gtcatccagt cgcgcgtctc gggttccgcc 88801 gccgtcgcga tcgacgcccg cgcgtgggtg gacggccagg ccgttcccgg ctggcaggcc 88861 gccgccgtgg acacgagcgc ctcgcgcctc gtcgcgggga cgggcacgcg cctgtggtcg 88921 tacctctcga agtcgtccgg gccgcagtcc gtcgcgttcg acgacgtggc ggtccggccg 88981 ctcacagcac cggtcgcggc acccgcgccg acgcccacgc ctgccccgac gacgccggct 89041 cccgcgcccg cgcccggcac cggatccggc tcgtccgacg ccgagcaggg cgtctccctc 89101 ggcgacgcgc gcacgggcgc gggctccgcg cccgtcggat ccacctccta cggcgtgccg 89161 tcggatgcgg tctacgtcgc gccgaccggc tcgaacggcg gatccgggtc gaagtcgtcg 89221 ccgtacgcca ccatccagaa ggccgtcgac gccgcccccg ccgggcgcac gatcgtcgtc 89281 cgtgccggca cgtaccacga gtcggtcgtg atgccgcagg gcaaggccct cacgctgcag 89341 tcgtacccgg gcgagagggt gtggctcgac ggcagccgcc aggtgtcctc ctggacggcc 89401 tcgggatcca cccgctacgc gagcggctgg gacgtcgcct tcgacgccag ccccacctac 89461 acgcgcggca agcccgacgg caccgcgacc gggtggcgct tcgtcgaccc ggcgtacccg 89521 atggccgcgc accccgacca ggtctggatc gggcagacgg cgcagaagca ggtcgcctcg 89581 cgcgaccggg tcgtcgccgg cacgttcttc gtcgacaccg cggccgaccg cctctacatc 89641 ggatccgacc cgggcagcca gccggtgcgc tcgagcgacc tcgtgcaggc actcagcgtc 89701 cgcggcgacg gcagcacggt gcgcggcatc gggatccgcc ggtacgcgcc ctcggtgccg 89761 gacctcggcg cggtcgtcgt gcaggcccgg aacgtcacgg tcgagaacct cgtgatcacc 89821 gacaacgcca ccacgggcat ctccatcacg gcgaccgggg cgaaggcgac cgcgctcacc 89881 gtggcccgca acggcatgct cgggatgcac gcgaactacg ccgacgggct gcgcgcctcg 89941 cgcctgctgg tggccgacaa cgacaccgag cgcttcaacc gggcgcccgt gtccggcggc 90001 ttcaagatca cgcgcagccg cgacgtggac gtgaaggaca gcgcgatcct ccgcaacgtc 90061 ggcaacggcc tgtggttcga cgagtccgtc tacgacgccg tcgtctcggg caacgacgtg 90121 atggacaact cgggatccgg cgtcgccttc gagctctcgg cgaccatcgc gatcgtggac 90181 aacgtggtgg cccgcaacgg cgaggagggc gtctggatcg acgacaccgg ccacgtggac 90241 atctggaaca acacgttcgt cgcgaacgac cgcaacatcg acatctcgca gggcacgcgg 90301 cgcgcgtcgg acctctcgac ggccggccac gatccccgtc agaagctgcc ggaccccacc 90361 gtgacgtggg tggtgaccga cgtcgacatc gcgaacaacg tgatgcaggg atccaccggc 90421 aacgcgctgc tggcggtgga ggaccactcg caccagcgct cggccggcca gatgggcatc 90481 acgacctccg gcaacgtcta ccagcgcgac gccgcgaacc gccccggctg ggccgtgatc 90541 tggtcccgcg gtgccgggga cccggccgtg tacggatcgg tgcaggcgtt cagcgccgcg 90601 accggcaacg accgctcgtc gctcgcgatc gacgggcgcc cggtcgtggg ctcgggcttc 90661 cggctcaccg acgaggtgcg ccgcgtcgag acgcaggtag ccgtgccgct gctgggcacg 90721 gtcgcgggcc tcatcggctg gctgaccggc gcgcgcgagc tcggggccga cgtgggctga 90781 tccccgcacg cacgacagga cgggccgacc cctcggggtc ggcccgtcct gtcgtgcccg 90841 gggaagtcgt cccgtgcccg ggcggtcgtc cccgtgcccc gaggcggtgt ggtcccagcg 90901 cccccggtgc gatcgtcccc gcgccccgca gcgcccccgg tgggggcgca ggtggtcggg 90961 gcgtcgccgt cagggcggga accagtgcgc cgggcggcgg gatgggtacg actactggcc 91021 ccggcggcgc gaccggaggg cgggcgcgac ggagcctggg acgacaccac cagcccgtcc 91081 ccggacgggc acccaccgcc atccgccgct gcgcacaggc aaggaccgtc ccatgaacgg 91141 cacgccccgc tcctcacgct cccaccgctc ccggcacgcg atcgcgctcg cggtcgccgc 91201 cgggctcgtc ctgcccgccg cgctcgtcgc cgcggatccc gcgtccgccg cgaccggcca 91261 ggacctcgtc gccggcgccg ccgtccactc ggacgctttc acccgcagcg cgaccggcgg 91321 ctgggggacg gcccccggat ccgcggcgta cgcctacgac gtgcccgcgg ccttccgcgt 91381 caacggcacg cagggcgtcg tcgacctgcc gaaggcgggg acgtcgctca ccgcgacgct 91441 gccgggcacc gtccccgccg acgccgaggc cacgatgcgc gtgatgctgc cgcggatccc 91501 ggccgtgggc agcggcgtct acgcgggcct ccagcagcgg gcggcgggct cgtcgtacta 91561 ccagacgagc gtgcgcgtcg acccggcggg ggacgcgcgg ctgtcggtcg tgcgggtgaa 91621 cggatccacg gccgcgcaga ccacgctcgc cgcggaggtc gtggtggcgc gcggactcgt 91681 gccggggcag gtgctgagcg tgcagtcgcg cgtctcggga tcctcgccgg tggccgtcga 91741 cgcgcgcgcc tggcgggtgg gcacggccgt ccccgcgtgg caggccgccg caacggacgc 91801 gagcgccgcg cggctgaccg ccggatccgc gacccgcgtc tggtcgtacc tctcctcgtc 91861 gtcccgcccg caggcgctcg cgttcgacga cctggcggtg cggccgctga cgcgggcggg 91921 gtcgacgccc gcgccgacgc cgaccgcgac gccgaccgcg actcccacgc cgaccgcgat 91981 ccctacgccg accgcgaccc cgacccccac cccgaccccc accgcccccg cgccgacccc 92041 gtcggatccg gagcagaccg tgccccgcgg cgacgcgcgg cccggcacgg gatcgggcgc 92101 cgccgccgtg ggcaccacga cctacccggc acccgccgac ggcgtgtacg tgtcgccgac 92161 cggatccgac accggcgccg gcacgaaggc gtccccgtac gcgagcatcc gccgggccgt 92221 cgaggcggcc ccgtccggcc gcacgatcgt cgtccgcgcc ggcacgtacc gcgagaccgt 92281 ggtgatgccc gccggcaagg cgctcacgct gcagtcgtac ccgggcgagg cggtgtggct 92341 cgacgggagc cgcgcgctga cctcgtggac cgcgtccgga tccacccgct acgcctccgg 92401 ctgggacgtg accttcgacg cgagccccac ctacacgcgc ggcgcgccgg acggcacgaa 92461 ggagggctgg gcgttcgtcg acccggcgcg tccgttggcc gcgcaccccg accaggtctg 92521 gatcggccag gcggcgcagc gccaggtcgc gtcgctcggg caggtggtcc ccggcacgtt 92581 cttcgtcgac accgccgccg accgcctgta catcgggtcg gatccgtcgg gccagaccgt 92641 gcgcgccagc gaccgcgtca gcgccctggc cgtccgcggc gacggcagca ccgtgcgcgg 92701 catcggcatc cgccggtacg cgccgtccgt ccccgacatg ggcgcgctcg tcgtcagcgg 92761 ccgggacgtc accatcgcgg acgtcgcgat caccgacaac gccaccacgg gcctctccat 92821 ccaggcgacc gacgtgaccc tgcgggcggt gacctcggcg cgcaacggca tgctcgggat 92881 ccacgccaac tacgccgacc ggctccgcgc ctcccagctc ctggtcgcgg acgacaacac 92941 cgagggcttc aatcgggccc ccgtgtcggg cggggtcaag atcacccgca gccgcgacgt 93001 ggacgtggtc gacagcgcgt tcctccgcag cgccggcaac ggcctctggt tcgacgagtc 93061 ggtgttcgac gcgacggtcg cggggaacga cgtgctggcg aacacgggca acggcatcgt 93121 gttcgagctc tccgcgcagc tctcgttcgt cgacaacgtc gcggcgggca acggcgccgc 93181 gggcctctgg atcgacgact ccggccacgc gcaggtctgg gcgaacacct tctccgcgaa 93241 caggcgggac gtggacatcg cgcagggcac ccggcgcgcg gcgaacctgg gggaggcggg 93301 ccacgacccg cggcagccgc tgccggaccc cacggtcacg tggatcgtca ccgacatcca 93361 ggtcgccgac aacgtgatgc agggcagcac cggcaacgcc ctgctcgccg tggaggacca 93421 ctcgcacgag cgttccgcca cgcagatggg gatcacgacc gcgggcaacg cgtaccagcg 93481 cgacatcgcc tcgagcccga ggtgggcgat cgtgtgggcc cgcggccccg gcgacccggc 93541 cgtccacgac acggtcgcgg cgttcgcgca ggcgacgggc aacgaccgga cgagcctcga 93601 cgtcgtgggc cggaaggtgc tcggatccgg ctggcggctc accgccgagg tcgcagccca 93661 gcaggccacg gtcgccgtcg ccgtgcccgc ggacgtcgcg gcgctgcgcg gagtggcgac 93721 gggcgcccgc gtcatcgggg catcggccgg ctgagcgcgt ccgggcggag atcgggggac 93781 accgtccccc gaagggggag gggcgacggg gctcggggtg cgtttagcat tgccaccgtc 93841 accacccgcc gttcacccgt cgtacccgcg atggacgctc tcggacgagg cccacccagc 93901 ccgtccatcc ccgagctgtg gacctgacgg ggtcttcccg gaccgcgtcg caccccgcat 93961 cacccacctg taacccgaaa cgcaggcaca cacccgatga acccgtcatc ggcgcaggac 94021 cgtacccgcc gtccgcgccc gaacgcgccc acccgcccct ccgacacccc gcgaccgctc 94081 gacgcgctgc ccggcacgcg atgagcacca cgaggaaccg tcccgcgacc cggggcgagc 94141 gcacccgcct gcgcaccgag cgccgctcgg cgcaccgccc gatcatcgga tccggcgtcg 94201 cgcccgtcgc gcccgtcgcc cccgccgtcc cctcgggccg ccgctgggcc cgcgactacc 94261 gcacccgcct catggcgagc gactgggcga tcatcgtcgc caccgtcctc gtcgcccagc 94321 tcacgcgctt cggcacgggc gacgcggccg tcgaggccgg ctcgatgcag ctcgactacg 94381 gggtcgtctc cgtcgtcgtc gtggccgcgt ggatcgccgt gctcggcgcg ttccgcaccc 94441 gcgacgcccg catcgtgggc gtcggcgtct ccgagtacaa gcgggtcgtc aacgcgtccg 94501 cgatcacgtt cggcgcgctc gcgatcggct tcctgctgct caaggtcgac atcgcccgcg 94561 gctacgtcgt gctcgcgttc ccgctcggcg tcgtcgcgct cctcgtgagc cggtggacct 94621 ggcgccagtg gctgatccgc cgccgcctcc agggcgcgca cctgtcgcgg gtcgtggtcg 94681 tgggatcccg ggccgacgtc gaggacgtgg ccgcgcagat cctgctccgc cccgcatcgg 94741 gctacgcggt cgtgggcgtc gcgatcgacg accacatcgc cggcctcgag gtcgccgggc 94801 gcacgatccc cgtcgtctcc gacctcggct ccgtcgccgc ggccgccgcc cgcaccgccg 94861 ccgacgccgt catcgtcgcc agccagccgc gggccggcag caacgccgtc cgcacgctcg 94921 gctgggagct cgagggctcg tcgatcgagc tggtgctcgc gtcgcgcctc accgacgtcg 94981 ccggcccgcg gatccacttc cgcccggtcg agggcctgcc cctcatccac gtggagatcc 95041 cgcagttcga gggcgggaag cacgtgatga agcgcgccct cgacatcgcc gtggccggcc 95101 tcgccctcgt cgtgctctcg cccgtgatgc tcgtcatcgc gtgcgtcgtc cgcatcgaca 95161 gccccggcgg cgccatcttc cgccaggagc gcgtcggcaa gagcggccag gagttccaca 95221 tgctcaagtt ccggtcgatg cgggtcaccg ccgaggccga gctcgaggcg ctggcggagg 95281 cgaacgaggg atccggcccg ctgttcaaga tgcggagcga cccgcgcgtg acccgcgtgg 95341 gcaccgtgct ccgccgctac tcgctcgacg agctgccgca gctgtggaac atcctcgtcg 95401 gcgacatgag cctggtgggc ccgcgcccgc cgctgcgccg cgaggtgcag ggctacgaga 95461 gccacgtgca ccgccgtctg ttcatcaagc ccggcctcac gggcatgtgg caggtgaacg 95521 gccggagcga cctgagctgg gacgagagcg tccggctcga cctgtactac gtcgagaact 95581 ggtccctgac cggcgacgtg atgatcatgt ggcgcacctt ccgtgtgctc acccgacccg 95641 taggggctta ctgatgtctg caatcgaacc gcgtcgactc cgcatcgcca tggtcgggac 95701 ccggggggtc cccgccgcgt acggcggatt cgagaccgcc atcgaggaga tcgggcagcg 95761 cctcgccgcc cgcggccacg acgtgaccgt ctactgccgt tcagctggcc gttccacgaa 95821 ccgcgcgcgc ccgcgcaccc acctcggcat gacgctcgtg cacctgcccg cgctcaagac 95881 caagtcgatc gagacgctca gccacaccgc gctgtccgcg atccacctgg ccctcggcaa 95941 gcgccaggac gcggccttcg tgttcaacgc cgccaacgcg ccgttcgtcc ccctcatccg 96001 ctcccgcggc acggccacgg ccgtgcacgt ggacgggctc gagtggaagc ggggcaagtg 96061 gggccgcatg ggcaagaagt actaccgcat cgccgagcag atggccgtga aggacgccga 96121 cgcgctcatc tcggacgcgc agggcatcgc cgactactac gaccacgagt tcgggatccc 96181 aacggagctg ctcacctacg gcgccgacat cctccgcgac cccgccagcg accgcctcgc 96241 cgagctcggc ctcgagcccg gccagtacca cctcgtcgtc gcgcgcttcg agccggagaa 96301 ccatgtcgac gtcatcgtcg acgggtacac cgcgtcggat gcgaccctgc cgctcgtcgt 96361 cgtcggatcc gcgccgtact ccgccgcgta caccgaccgc atcgagcggg tcgccaccgc 96421 cgacccgcgc atccagcgcc tcggcggggt gtgggaccag gagcagctcg accagctcta 96481 cgcccacgcg ctcacctaca tccacggcca ctcggttggc ggcaccaacc cgtcgctgct 96541 gcgcgccatg ggcgccgcga ccgcgacgct cgccaacgac aacgtcttca accgcgacgt 96601 gctcggcgag gacggccgct tctggtcgga cgccgccggc gtcgccgcgc tcgtcgaggg 96661 cgcggaggcc gcggccgacg aggccgtcgc gatcggccgc cgcctgcagg agcgcgccga 96721 ggagacctac gactgggacg cgatcgccga cggctacgag gagctcgcgg cccgcatgac 96781 gcgcggctac tcgacgcacg ggatgagccg cggcgtccgc tcggccaccc gctgggagcc 96841 ggagctgcgc gcgagcgacg ccagccgcac gtccttcctc ctcgaggaga gccgatgacc 96901 gccgccgcag atccgcgcgc cgagtcgtat ctcgacgtcg tccgccgcct cgcgtccgcg 96961 cagaagaagg cggcccgcgg cgcgcccgcg tactcgatcc gcgtcaaccg gcccgccggt 97021 cggctgctcg ccgcgtgggc cttccgcgcg gggctcaccc cgaaccaggt gaccgcgatc 97081 agcgccgcct tcacgttcac cgggatcgcc ctgatcgcgc tcgtgcagcc cgccgcctgg 97141 ctcggcatcg ccgtctggct gctgctcgcc gtcggctacg cgttcgactc ggccgacggc 97201 caggtcgcgc gcctccgcgg cggcggctcg ctctcggggg agtggctcga ccacgtcgtc 97261 gactgcatca agatctcgtc gctgcacctc gccgtgctcg tgtcgatgta ccgctggccc 97321 gccacggact ccgatgcgtg gctcctcgtg ccgatcgcct acgcgatcgt ggccgccgcg 97381 agcttcttcg cgatgatcct caacgaccag ctcaagcgcg tgcacgccgt cacgggcgcc 97441 accgcgcccg aggccggccg ctcgaccctc ctgcgctcgc tgctcgtgat ccccaccgac 97501 tacggcttcc tctgcatcgt gttcgtgctg ctcggtgcgc cggtggtgtt cctcgcggtc 97561 tacgcgctga tgatggtcgc caacgccggg catctcgccc tcgcgtcggt gaagtggttc 97621 cgcgacatgg gcgcgctcga cgcgcgccgc gccgaggccg cgacgtcgtc cgcctccgcc 97681 gccggatccg ctcgggtgcc cgcgtgaccg cgttcgccgg cgtcgagcat gcgctcgcgc 97741 gggccgacgc cgacggcgcc gacctccgcg gacgcacgat cctcgtcgcg cacccgagcg 97801 ccgagctgta cggatccgac cgcgtgctgc tcgagagcgt cgccggcctc gtcgccgcgg 97861 gcgcccgcac cgtcgtgacc ctgccgtccg gcggcccgct cgtcgacgcc ctcaccggtg 97921 tcggcgcggt cgtgcaccac gcgcccacgc ccgtcctccg caagtcgatg ctgcgcccgc 97981 gcggcttcgc ggccctcgtc ggccagtccg tccgcggcct gtcggcgggc ctcggcctcg 98041 tgcgccgcac gcgcccggac gccgtgtacg tcaacaccgt caccatcccg ctgtggatcc 98101 tcatcggccg cctcgccggc cgcccggtgc tcgcccacgt gcacgaggcg gagggatccg 98161 cgtcgcgcgc cgtcggcacc gcgctcgccc tgccgctcgc gctcgccacg agcgtcgtcg 98221 cgaacagccg ctacagcgtc gacgtgctcg gccgcgcact tccgcgggtc gcgcgccgcg 98281 ccgaggtcgt ctacaacggc gtgcccggcc cggccggggt ccagccggcg cgcgaggcgc 98341 tcgacggggg cctccgggtc ctctacgtcg gccggctctc cgaccgcaag ggcgtggacg 98401 tcgccgtcga cgcgatcgtc gagctccggg accgcggcgt ccccgccacc ctcgacatcg 98461 tgggcgccgt cttccccggg tacgaggcgt acgaggagca gctgcgcacg acgatccgcg 98521 tcctcgacct cgaggaccgg gtcacgctgc acggcttcca cgccgacgtc acgccgttcg 98581 tggccgccgc cgacgcgtgc gtcgtgccct cccgcgtgga cgagccgttc ggcaacaccg 98641 ccgtcgaggc gctgctggcc gcccggcccg tggtggtcag cgacacctcc ggcctccgcg 98701 aggccgcggg cggatacgag tcggcgcagc tggtgccgcc ctcggacccg gccgcgctcg 98761 cggatgccct ccagtccatt gcggcggact gggacgcata ccgcgcccgg gccgcccggg 98821 accgcttccg cgccgagcac cggcacggac ccgagctcta ccggcagcgc atcgcgcggt 98881 cggtgggcac gatgctcacg ctcacgaagc gcgtcggcag cccccgaccg gccagcgacc 98941 gctgaccccc ggcaccctcc ctcacccgca ccacccaccc caagcaagga cgaaatgagc 99001 atcctctcct ccgcgggacg tcgcctggcc gccatgaccg cggccgccgc ggtcatcctg 99061 tccgcggtcg tgatcgcgca gcccgcgatg gcggactccg cgccggtcga cccgaccgac 99121 ccgaagacgc ccgtcacggt caccgccgac ccgctgccca cgacccagat cgacggcgtc 99181 gcctggtcgc aggtcgtcgt cggcaacacg gtctacgtgg ccggcaagtt ccagaacgcg 99241 cgccccgcgg gcgccgccgc cgggacgaac ctcacgccgc gcagcaacct cctcgcgtac 99301 gacatccgca cgggcgcgct catcacgtcc ttcgcgccga agctcaacgc gcaggcgctc 99361 caggtcaccg cgtcgcccga cggatcccgg atctacgtgg tcggcgactt caccgacatc 99421 gacggccagg gctactaccg cgccgcggcc ttcagcaccg cgaccggcaa gatcatcccg 99481 accttccgcc cgatcatggg cagccagacc cgcacggtga gcgcctcgaa cgacaccgtg 99541 tacctcggcg gcaccttcca gagcgtcaac ggcgccgctc ggaagtacct cgccgcggtg 99601 tccgcggcga acggccagaa cgcggccttc gtcgcggatg cggacaccgt cgtggacgcg 99661 ctcaccctca cgaaggacgc gtccaagctc atcggcggcg gccgcttcac gcagctcagc 99721 ggcaccccga cctacgggct cggcgcggtg gatcccgcct cgggcgcctc gctcccgtgg 99781 gccgcgaacc agcaggtcaa gaacgccggc gccgagtcgt cgatcacgag cctgtacgcg 99841 tccgacgacc gggtctacgg ctccggctac acgttcggcg ccggcggcaa cctcgagggt 99901 gccttctcgg ccgacccgaa cacgggcgtc gtgaactggg tcgaagactg ccacggcgac 99961 acctactcgg tcttcgccac cagcaaggtc gcgtacgtcg cgggccaccc gcactactgc 100021 ggcaacatcg gcggcttccc gcagacggat ccgtggacct tccagcacag cctcgcgttc 100081 tcgaagaccg cgaccggcac cgccacggcc gacccgtacg gctacgcgaa ctgggccggc 100141 acgccgtccc catcgctcct caactggttc ccgaagtacg tcacgggatc cttcacgggc 100201 cagggccagg cggcgtggag cgtcaacggc aacgaggact acatcgtcgt cggcggcgag 100261 ttcccgttcg tgaacaccac cgcgcagcag ggcctcgtcc gctacgccat ggccaatgac 100321 gccccgaaca aggtcggccc gaacggcaac gaccagctcg tcccgaagtc gatctcgtac 100381 acgaagggcg aggcccgcgt ctcctggcag gccaccttcg accgcgacaa cacgcgcctc 100441 acctacaagg tgatccgcga cggcaagacc gcgacgcccg tctaccaggt cacgcaggac 100501 tcgaccttct ggaaccggcc gtcgatgggc ttcatcgaca cgggcctcgc gcccggcagc 100561 tcgcacacct acaaggtcgt cgtcaccgac tcggccggga actccaccga ccgcaacggc 100621 gcatcgcccg tcaccatcac cgaccagtcc ggcagcgacg cgtacgccac gagcgtgaag 100681 gacgacggcg cgaccgcgta ctacccgctc gacgagaagg acggcaccgc cggcctcgac 100741 cacgtcgcgt tcgaggacct ccgggtcgac gccgccacgc gcggcgccgc gggcccgatc 100801 gacggatcca ccgccaccac cttctccggc caggacgggt ccttcgcggt cacgccccag 100861 ccggtgcagg ctccgaacac cttcagcgtg gagtcgtggg tcaagaccac ctcgacctcg 100921 ggcggcaagg tcgtcggctt cggcggcagc aacacgggta cttccggcaa ctacgaccgc 100981 atggtgtacc tcgacgacga cggccggatc gtcttcggcg tctacacggg ggcgacccag 101041 acgctcagct cggtgcccgg gtacaacgac gggaagtggc accagatcgt cgccaccatg 101101 agcggcgacg gcatgaagct gttcgtcgac ggcaagctcg ccgggcagcg cgcggacacg 101161 acgcagggcc aggactacac gggctactgg cgcgtcggcg gcgacaacct cggcggctgg 101221 cccaaccagc cccggagcta ctacctcgcc ggcgacatcg cccaggtgtc catctacccg 101281 accgccctca cgcgcgccga cgtcgtcgac cacctggtcg cgtccggccg cacctcgccc 101341 atcccgcccg cgccctcgga cgcgtacggc aaggccgtgt acgcggccga cccgtcctcc 101401 tactggcgcc tcgacgacgc cgacggctcg acgacgctca aggacgccgg gcagaacgag 101461 gtcggcgcga acgtcggacg caacgtgcgc ttcggccagg cgggcgccct ctcgggcccg 101521 gtcggccagg cggcggcgtt ctccgacagc atcgcggtga gccagcagcg gatctccaac 101581 ccgaccacgt actcgctcga gatgtgattc cagacgacca ccacgcgcgg cggcaagctg 101641 atcggcttcg gcgacaacgc cgatccgttc gccttctccg gcagctacga ccgccacgtc 101701 tacatgcagg acgacggacg cctgcagttc ggcacgtgga ccggccagac caacctggcg 101761 ggatccgagc gcgcctacaa cgacggccag tggcaccacg tggtggcgtc gcagggatcc 101821 gacgggctga agctctacgt ggacggcgac ctcgtcggcc agaacggcca gacgcaggcg 101881 cagggctacg acggctactg gcgcatcggc ggcgacaaca cgtggggctc ctccagcggc 101941 accttcgagg gccggatgga cgaggtcgcg gtgtacccga ccgtgctcac gcccaccgcc 102001 gtggagacgc acttctccct cgggaccagc ggccgcgtgc cgaaccaggc cccgaaggcc 102061 gcgttcacgc cgaccgccga cttcctgacg gtcgcgttcg acggcagcgg atccaccgac 102121 gccgacggca cgatcacggg ctacgcctgg gacttcggcg acggcgtcca ggcgtccggc 102181 gcgcagcagt cgcacacgta cgccgcggcc ggcacctacc cggtgacgct cacggtgacg 102241 gacgaccgcg gcgcgacgaa ccgcacgcag caggacgtca cggttaaggc ggctcccgtc 102301 aacatcgcgc cgacggccgt ggtcaccgcg accgcgaccg acctcaccgc gaagctcgac 102361 ggatccgcct ccacggacgc cgacggccag gtcgcctcct acgcgtggga cttcggcgac 102421 ggcagcacgg gcaccggccc gacgccgacg cacgcctacg ccgcgggcgg cacctacacg 102481 gaggcgctga cggtcacgga cgacaagggc ctcacgggca ccgcgtccac gcaggtgacg 102541 gtggtggcgc ccccggtcaa ccgggagccc acggcggtca tcgcgtcgac cacgaccgac 102601 ctggtcgcga acctcgacgg ccgcgcatcc agcgacccgg acggcaccgt cgcgtcctac 102661 gcgtgggagt tcggcgacgg gacgaccggc accggcccgt ccatcgccca cccctacgcg 102721 aaggccggca cgtaccaggt cgcgctcacg gtgacggacg acaagggcgc gaccggtcgc 102781 acgaccgcga gcgtcacggt caccgcaccg cccgtgaacc aggcgcccgt cgcccggttc 102841 acgagcaccg cggcgaacct cgtcgcctcg ctcgacgcct ccgcgtcgac cgaccccgac 102901 ggcaccgtgg cgtcctggtc ctgggccttc ggcgacggga ccacgggcaa gggccgcacc 102961 acgacccacg cctaccaggc tgccggcacc ttcgcggtgt ccctcacggt cacggacgac 103021 aaggggctcg ccacgacgac cacctcgccg gtgaccgtcc aggcgcccgc gtcgaacgtg 103081 ctcgcgcagg acgcgttcgg ccgcacggtc gccacgggct ggggcacggc cgagctcggc 103141 ggcgcctggc gcgtcaccgg cggcacggcc atcgtcaagg tgcaggacgg cacgggccag 103201 gtcgtctcgc cgaagggcga gacccgcacg atgaccctcg acgcggtgtc caccacgtcg 103261 tcggacgtca gcgcgacctt ctcgctcgac tccgtcccca caggcggcgg ctcctacacc 103321 cgggtcaact cccggcaggt ggggtcggcc ttctaccaga cgcaggtctg gatcaaggcg 103381 accgggcaga tccagctggt gcagtcggag ggggcgacga ccatcgggtc gtacatcctc 103441 cccggcacga cctaccaggc cggccagcag ctccgcgtcc gcgtcctgac gaccggcacg 103501 tcgccgacca ccgtcaaggc gaaggtgtgg gtcgccggcc aggccgagcc cgccgcatgg 103561 cagacgagcg tcaccagctc gaccgccgcg ctgcaggccg cgggctccgt cgggatccag 103621 acctacctct cggggtcggc gacggctccc gtgacgacgc ggatcgacga cctggtcgtc 103681 agccgcgacg gccaggcgcc cgcgcccgca ccggcaccgg gcaaccaggc tccggctgcg 103741 gcgttcacgt cgaccgcgaa ggacctgacg gcctcgttcg acggatccac ctcgacggac 103801 gccgacggca cggtggcctc gtacgcctgg gcgttcgggg acggcacgac gggcacgggc 103861 aagaccgtgg atcacgccta cgccaaggcc ggcacctaca cggtgtcgct gacggtgacg 103921 gacgacaatg gcctcgcctc ggcgaggaag gacggcacgg tcacggtgac cgcgccggtc 103981 gtcgctccgc ccgccgccgg gatcctcgcg caggacacct tcacccgcac cgccgcgaac 104041 ggctggggca cggcggagac cgggggcgcc tggcgcatca ccggcaacgc gtcgatcctc 104101 aaggtgcagg acgggagggc gcaggtcgcc agtcccgccg gcgagacccg caccgcgagc 104161 ctcgacgccg tgagcaccac cgcatccgac gcccaggtca gcttcgcgct cgacagggtg 104221 cccacgggcg gcggcgcgta cgtgcggatc aactcgcgcc aggtcggcac cgcgacctac 104281 cagacgcagg tctgggtgcg gtcgaccggc caggtgatga tcgtgcagtc cgagaacggc 104341 gccaacctga agtcggtcgt cgtcccgaac ctcacgtaca cggccgggca gcagctgcgg 104401 gtgcgcgtgc aggtcacggg cacgtcgccc accacgatga acgcgaaggt ctggcccgtc 104461 agccaggccg agccgaccgc gtggcagtcg acgacgaccg ggaccctggc cgccctgcag 104521 accgcgggca cgttcgggat ccagacgtac ctgtcgagct cggccgccgg acccgtcgcg 104581 ttcacgctcg acgacctgct ggtgacggac ggcaccgccc ggtgagctag gtgtactcgg 104641 ccatgacgtt ggtgacactt cggggcgtgt gaagaggcct cctggcttga tggagctgtt 104701 cagttcaacc atcgccagga ggcctcgatg tcccacggta atgctcgtct gacggttcac 104761 gggagggttc tcctcgtgcg gcgggtggtg gaggatcgtc ggccggtcgc gcacgtcgcg 104821 cgggagctgg gggtgtcgcg gcagtgcgcg catcgatggg tgaaccggtt ccgtgccgag 104881 gggctgcgag ggctgacgga tcggtcatcg cggccccggt cagtaccgag gcgaacgagc 104941 ccggagcggg aacgggccgt gctggaagcg cgggcccagt tgcgggcggg tcctgcgcgg 105001 ctggcgccgg tgacaggtgt tccatcccgt acgatctccc gcatcctgcg ccggcacggg 105061 gcgccgccgt tggcatggtt ggaccccgtc accggggccg tgatccgggc atcccggtca 105121 acggcgcacc ggtatgagca cgagcatccg ggtgatctga tccacgtgga cgtgaagaag 105181 ctcgggagga tcccggacgg aggcggctgg cgggtccacg ggcgcagcga gcaggtccgc 105241 ggccgcggga tcgggttcga ttacgtccat gccgcggtcg atgaccacac ccgtctcgcc 105301 tacgcggaga tccatcccga tgagaaaggc gcgaccgcgg ccgggttcct gacccgcgca 105361 gcggcgtact tcgccgggca tgggatcacc cggatcgagc gggtcatcac ggacaacgcg 105421 ttcgcctacc ggcactcgac cgcgttcaag aacgccgtcc aggacctggg cgcgcggcag 105481 aagttcatcc gcccgcactg cccctggcag aacggcaagg tcgagcgctt caaccggacc 105541 ctcgcgaccg agtgggccta ccggcaaccc ttcaccagca accaacaccg cgccgacgcg 105601 cttgacccct tcatcgagca ctacaacact gaacgaatcc actcaagcca cgggctcacg 105661 cccgcggccc gagtgtcacc aacgtcatga cccagtacac ctagcccagc gccgcctccg 105721 cctccgacgc gcccgccggg acggcgacca ccgcctcgcg tccggcgtgc gccacccgca 105781 cgccgcccgc gaacgccgtc acgcgcacgc gcccctcggc gtcggtccgc agcgtggtcg 105841 gcgcgagccg ccactcctcg cggatcagcc ggcggagcgc ctcgtacgac ggcttcggcg 105901 tgccgtccgc ccgcaccagc ccgccgggcg cgcccagcca catgccgtcg tccgtgagcc 105961 cccagtaggt gattgccgcg acggccgggt gccccacgag ggagcggtag tgccgctcga 106021 tctcgtccgc ctgccgctcc tcgcccgcgg gagtcgacgg ccagctcgtg acccggaagt 106081 cgttgaggtc ggtgatctcg ggcggcatgg ggtcgcccga gagcagcgtg gtctcggtca 106141 tgtggatcgg cagcccgaag cgcgcgaacc ggtcgacgat cccgagcacc tcctcctcgc 106201 cgcggtaccc ctggtgcatg tgcgtctgca gcccgatggc gtccaccggg atccccgcgc 106261 ccagcacctc ctcgatgagc tcctcgtagg cgggcgacag gtcgaagtcg ttcagcacga 106321 gcgtcgcggc cgggtccgcc gcgtgcgcct cctcgaaggc catgcgcacc atcgcgagcc 106381 ggccgcgcgc cgccgccagc cgcgtgatcc cgttgtcctc ccggtcgaac accggcatga 106441 tcacggcctc gttgatggcg tcccacatgt cgatgagccc cgcgaagtcg cccacgtcgc 106501 gccggatccg ctcccgctgc acgcgctcca cctcgtcgag cggcaggtcg agcagccact 106561 gcgcggtgac ggtgtgccag acgagcgggt gccccttcac gtcgacgccg cgctcgcgca 106621 gccagcgcgc cgtggtgagc agccgctcgg tgtcgggctt cccgcgcacg ggctcgaacc 106681 ggccccagta gaaggggagc gtggccgtgt cgaacacgtc gagccactgc tccgcgagcc 106741 gctccagccc ctcgaggcgc gcgccgccga aggcctcgat gcccgcctcc gcgggatccg 106801 tctcgccgtt cgcgagcggg atgaggtcga agccgatgtt gccgaaggcg atgtcctgcg 106861 acgcctgctc gaccaccacg tccgcgtggg cgagcggctg tccgtccgca tcgcgcacgg 106921 tgatcagggc ctccgcgcgg cgggcgtcgg ggatcgcggt cgggcggcgc ccggcggtcg 106981 acgggtcgga tggcgtgcgg gacatgggtc cccctcgagg ggtcggcgcc acgcgaacgc 107041 tgtccgtccg ccggcgggcg ggaggaggag cggtccgcgg gcggatgcgt cggtgcggtc 107101 gccaggaacc tacgcgggcc gtacgacggg cgtccaccgc gcccccgatg tccgcaagct 107161 ttccccctcc gcgacgggtg gggacgggcg gtcgcgggcg tagcgtgcac ccagggcgcg 107221 gatccgaccg gcgcccccgc cccgatgacg aggacccctg tgacccacga cgccgcccgc 107281 ctgtccgtgc tctacctggg cgggacgggc accatcagcg ccgcgtgcgt ccgggcctcc 107341 gtcgccgccg gcatggacgt cacggtcgtc aaccgcgggg ccgacgccca gggccggggc 107401 acgcccgacg gcgtgaccac gcgcatcgcc gacgtcacgg atccggccgc cctcctcgcc 107461 gcgatcggcg accgcacctt cgacgcggtc gtcgacttcc tgtccttcga cgccgcaggc 107521 gccgaccgcc gcgtcgaggt cttcgctggc cgcacccgcc agttcgtggc catcagctcg 107581 gcgtcgatct accgcaagcc cgcgctgcag acgcccatca ccgagtcgac gctccgcgcc 107641 aaccccttcc tctcctacgc gcgcgacaag atcgcgatgg aggacgcctt cctccgctac 107701 cacgccgcga gcggcttccc cgtcgtgatc gtccgcccct cgcacaccta cgacgaggcc 107761 agcccgccgc tcgcgggcga ctggacggtc gtcgaccgca tcgcgcgcgg cgacgaggtc 107821 gtggtcccgg gcgacggcac atcactctgg acgctcacgc acgccgacga cttcgcggtc 107881 ggcctcgtcg gcatcctcgg cgacgagcgc gccgtgggcg aggcgctgca catcacgagc 107941 ggcgacgtga tgacgtggga ccggatccgc cgcctcgtcg ccgacgccct gggcgtcgag 108001 gcgcgcctgg tgcacgtgcc cgccgagcag ttcccggtcg tggagccgga ctggggatgg 108061 tcggagctcg tcctcggcga cctgtcgcac agcgcggtct tcgacaccac ccggatccgc 108121 cgcctcgtgc cggcgttcca gccgaggatc ccgttccacc tggcggtccg cgggatcgtc 108181 gcgtggcggg cagcgcaccc ggagctcacg cgaccggacg cggacaccga ccgccggatc 108241 cagcgcctcg tcgacgcgaa gcacgccgcg gacgccgctt accgggccgc cgcggcgggc 108301 tgagccgcgg ctctcgccgc gcggcgaccg cctaccgcac ggcgatcgcc taccgcgcgg 108361 cgaccgcggg acgcgcggcg acccgcccga cccacccggt gcgggcgcgc gcgacgagcg 108421 tcacgaccac gaccgcagcg gccgccacca gcgcggccac cgcggccggc gtcgacagca 108481 gctcgcccgt gagccgcccg acggccaccc acgcgaggcc ccaggcgatc gccgcgctgg 108541 gcgcgagccg cccgccgtcg cggagcgcga gcaggacgcc gacgacgccg gcgaccgcga 108601 gcagaacgac cgcccacgcg tcgcgcccgg tcgttcccgg ctggaagccg gacgccgtga 108661 ggatggacgt gatgttcgcg atggtcgcga cgctcaccca ccccaggtag aggcccatcg 108721 tgccgtcgag cacgacgccc tcgacgaggt tccgcggccg cgtcgccatg agggtgcgga 108781 aggtccagat cagcgtcagg agcagcgcca cgatgacgac gccgctcagc acgaggaacc 108841 cggcctgcgc cgtgaggatc cacgcggcgt tgagcacgag ggtcacggcg acggggtagc 108901 cgacgcgtcg ctggcgctcg tcggcgcgct gggcggggag cgcctgccag atcgtgtacg 108961 cgacgagccc gaggtagatg acgctccaga tcgagaacgc ggggccggcc ggtgctacgg 109021 gcgtgtagct cgcgctgagg gcgccgctcg acgcgttctg gatgctgcgg tcgctgaacg 109081 cgcccgagcc gaacgcggag ccgatgacgg cgaacgccat gctcgagatg acgacgatct 109141 ggcggacgat gtccttcacg gtgcccatgc ggcctgctcc tctacgatgg gaaagtcagc 109201 aggcggatag taagcctgct gacgatcact gtagcaggag gtgcgcgcat ggcagcaggg 109261 atgtccgccc aggacgagct cgcgagctgg ccgacggggc ggctgctgtc cacggccgcg 109321 cgcgccgtcg agcacgcctg gggcgaggcg ctcgctaccc tcggggtcac gcacgcgggc 109381 ctcatcgcgc tgcacctgct ccgggacggg ccgctcagcc agatccagct cgcccgctcc 109441 gcgcacgtcg agacgcagac catgtcgcgc acgctggagc ggctggagcg ggaggggctc 109501 gtgtcgcgcg cgccggatcc cgccgaccgc cgccgccacg tcgtcgcccg caccgatgcc 109561 ggcgccgacg cgtgggagcg cgcgcaggcg ctcgagcagg acgtcgtccc cgagctcgcc 109621 cgctcggagg agatgcgccg cggcctcatc gacgtgatcc gcgcggccgg ccgtccggcg 109681 cccgccgcct cgcccgcgtc gcctgccggc accgcagcct cgcccgcgtc gcccgcgtcg 109741 cccgccggca ccgccgccga ggggcgcgca cgatgacccg ccccgcggat ccgatctccg 109801 ccgccgcccc cgacctgccc ggccgcgcgg tcatccgcca ggtctggagc gacctggcct 109861 tcgtgcactg gcgcgtggat ccggcgctcg tcgccccgct cctcccgccg ggcacgcgcc 109921 ccgacgtgca cgacggatcc agctgggtcg gcctcatccc cttcgtcctg tcccgcagcg 109981 ccttcccgcc cctgcccgcc gtgccgtggg ctggcacgtt cgccgagctc aacgtgcgcc 110041 tctacagcgt gggcgacgac ggccgccgcg gcgtggtctt ccgctcgctc gaggccgcga 110101 agctcctgcc cacgatcggc gcgcgcgtcg gcctcggcct gccgtacatg tgggcgtcga 110161 tgacgcacga ggagcacgac ggcgtcgtca cctacacatc gcgccggcac acgggctccc 110221 gcccgacctc gcgcatctcc gtccgcccgc tcggcgagga ggcggagggg gatccgctcg 110281 ccgacttcct caccgcccgc tggggcatgc acgtggcccg cgggggcgtc acgcgctact 110341 ggccgaacac gcacgacgcg tggaccctgg agcgcgccga gctggtcgac ctcgacgacg 110401 agctggtcgc cgccgcgggc ctcccgggcg tcgtggaccg cgcgcccgac tccgtgctgt 110461 tctcccgcgg cgtccgcacg gagttcgccg gcccgctccg cccgcgcgcc tgacggccgg 110521 gtcagcccgc ctgcccggcg ccgcgccccg gctccggcgc ggacggatcc cgcctaccgc 110581 ttcgcgcgcg gcgtcctggt cgagcgcttc cgccctcccg acagctcgtc gatcgtcagc 110641 gcggcgctca cgagcgcgag gtggctgagc ccctgcggca ggttgccgag gaacgcgtgg 110701 tcgtcggcgt cgatcatctc ggagtacagc ccgacgtcgt tgccgaggtc gacgagctgg 110761 tccgtgagct cgcgcgcctc gtccatccgc ccgacgcacg cgtaggcgcc cgccaaccag 110821 aacgcgcacg cggtgaacgt gccctcctcc tccggcatgc cggagtagcg gtacagcagc 110881 ggcccgcggc cgagctccgg gcgcagcgcg tcgagcgtcg acgacatgtg ctcgccgcgg 110941 tcgaagcccg agacggcgtg cagcaggatg ctcgcgtcga ggcgctggct gcccgggtgc 111001 atcacgtagg cgccgcgtcc ctcgtcccag cactcctcct cgacccaggc gcggatccgg 111061 tcgcgctcgg cacgccaccg gtccggcacg ccggggatct ggccgagctc cgcgagctcg 111121 accgcgcagt cgagcgcctg ccagcagccg agcttcgagg tcgtgtagtg ctgctcgtcc 111181 tcgagctccc acatcccggc gtcgcgcttc tgccacgagt cgcacgtccg gtcggcgaac 111241 gtcgcgagga ggcggccggt gtcggcgtcg agcacgttgc cgtcgcggac gtacgtgcgg 111301 acgacgtcga agaggtcccc gaacacgccg agctgcagct gcgcctgcgc gtcgttgccg 111361 tcgacgacgg ggccgacgcc gcgccagccc ggcacctccg ggttcgagct gccctcgggc 111421 acgccgccct ccagggagta gaagacgtgc aggtcggggc cgttgtcgcg gatcgtgcgg 111481 agcatccagg agaccgccgc gtgcgtctcc tcgcgcaggc cgaaccgcac cagcgcgttc 111541 accgtgtagg ccaggtcgcg cacccaggcg aagcggtagt cccagttctt gccgccgccc 111601 atgcgctcgg gcagcgaggt cgtcgcggcc gcggcgatgg atccggtggg cgcgtgcacg 111661 agcagcttga gcgcgagcgc gctgcgctgc acggcctcgg cccactcgcc ctcgtaccgg 111721 aactcggcgc tccagccctc ccagttgcgg atcgtgcggt cgatgctctc gtccacgatc 111781 tccgggttcg ggatccgcac gggctctcgc tcggtcccca ccatcgtgat gacgtggcgc 111841 gatccctcct tcgtcgtgaa cgcgccggac accgactgcg tgccgggctc cgcggatccg 111901 tggtcgagtc cgacgaccgc gagcgtcacg ccgtccacgc ggatgacggg cccgttgtgc 111961 gtcgactgca cccacggcga cgacgtgccg agcgcggtgc cgggggcgac cagccagctc 112021 atggcgacct cacccgtgag cccctcgatc cgccggccga gctcggacca tggcagccgc 112081 ccggcgacgc ccgtgacgag cgcgtcggtc acgcgcacgc tgccggacgc ggtggtgaag 112141 gtggtggtga gcacgttggt gccgggcacg taggcgcgcg tcacctcgaa ctcctcgtcg 112201 ggccgcagcg tgatccgccc gccgtgcggg gcgtcgagga tcgcggcgaa cgcgggcggg 112261 gtgtgcaggt tcggcagcgg cagccagtcg atgtcgccgt cctccgcgat gagcgcgacg 112321 gtgcgcccgt ccccgatggc ggcgtagctg cggagcgcga cgtagccgtc ggtgcgctcg 112381 ggtgcggggc gggatgcggg cgtttccatg ggactcctgt cgacgccggc aggagggcac 112441 cgacccctcc agtatccccg ggtcgcctcc gcgcgaccgg gtcgtcgacc gctccgccgg 112501 gagtgcgggc gagaggccgc caatccgttc ttccccgagt tccgaatcgt cccgatgtgc 112561 ccggagccca cccgaacggt tccggtcgcc gcccgccgga cagcgccgtc cgcgcgggtc 112621 tcccgcccgg aggccacccg ggccaggctg gatctatgac gctcatcgag gccgtgcgcg 112681 gcgacatcac ccggcaggac gtcgacgcga tcgtgaacgc ggcgaactcg tcgctcctcg 112741 gcggcggggg agtggacggc gcgatccacc gcgcggccgg cccggagctg ctcgccgcct 112801 gccgccgcgt ccgcgccgac gagctgcctg acggcctgcc cgcgggcgac gcgatcgcga 112861 cgcccggctt ccgcctgccc gcgcgccacg tgatccacac ggtcggcccg gtctggtccc 112921 ggtccgacga ccgcaccgcg gtgctcgcga gcgcctaccg ccggtcgatc gaggtggcct 112981 ctgccctcgg catccgcagc gtcgccttcc ccgcggtctc ggccggggtc tacggctggc 113041 cgctcgacga cgcggcgcgc gtggcggtgg gcgcggtgcg cggagcggtg gccgacggcg 113101 cggcggaggg catcgagctc gtgcgcttcg tgctcttctc ggacgaggtg ctcgcggcct 113161 tcgagggggc gctcgcgtcc gacgtctgag gagcggtgcg acacggaccg gggaagacgg 113221 acgccggccc tgccgtcgag gacggggacc ggcgagtggt gcctggacgc ggcgtcgatc 113281 cgcggacctt tcgattttca gtcgaacgct ctaccaactg agctacccag gcgagcgggc 113341 ggcttgcgag aagacgccca catcggacag aagccctctc gtgagagagg gctcgcatcc 113401 gtggcgaccc tgacgggact tgaacccgcg acctccgccg tgacagggcg gcacgctaac 113461 cagctgcgct acagggcctt gcatgtcgat cacattgtgt tccgaaccac actgcctggt 113521 gaccccaacg ggattcgaac ccgtgttaac gccgtgaaag ggcgccgtcc taggccacta 113581 aacgatgggg ccgctcgccc tggcggacca ggtctcgcag caaccgacac gtcagcataa 113641 ccgcactccg ggcgaggact caaatcggcc gtccccgcgc gggtcgcggc cccgcgggca 113701 tgcggatcgg gcggcgtgtc gccacctcgc gcacggcctc cgcgaaggga tcgcgggcac 113761 cgttcccgag ctcctgccag gttcgcgaca cggccagcgc gctgccgcgg tgtgccccat 113821 ccgcggggtt agccttcgct cgaccctccc ggggagggga tcccccgtac ggatccccgc 113881 atcggcgcgc tgtgcgtcgc gcacccccgt tgctactgtg agagccggtg aaggcgtgac 113941 ggatgtgatc cgcgctcccc gccggccctg cagggaggcg cagccggcca gccgggcgac 114001 acgatgatcg ggatcaccat gcaccatgac ctcctccgga gctcgcccac ctcgggcgcc 114061 agacgacagc gcccgcgcgg ccgccgcagc ctccaggcga tcgtcgccat cgccgccgtg 114121 ctcctcaccg ggtcgatcgc ggctcccgcc cacgccgaca ccttcgcctc gtgggacgac 114181 gtgcagaagg cccgcggcga cgagcaggcc cagcaggcgc tcgtgcagcg catcaacgac 114241 gagatcgcgt cgctccagca gaaggtcagc gacgcgcagg acctcgtggt ccagcgcggc 114301 gacgagcacg acaaggcgca gcaggcggcg gatgacaagc aggcggagac gatcctgctc 114361 cagcagaggg tcgacgaggc tgccgagaag gccaccaagt cccaggagca ggcggccggc 114421 ctcgccaagc agctgatgcg gtccggcggg cagaacctct ccggcaccct cctcctcagc 114481 gagggcgacg gcagcgacga cctcctcgac aagctcggca ccatgagcaa ggtcgccgag 114541 aagtccgacc agatctacgc gatcgcgctc caggaccgca acgccgccaa gtccctcagc 114601 gaccaggccc aggtggcgct cacggagctc gatgcgctga acgcgaaggc cgagcagctc 114661 ctcgaggagg ccgcccaggc gcagcaggac ctcgagcagg cgctcgagga ccagagcgcg 114721 cagaaggcgg acgccgacgc gaagctctcc gtcatcaccg agaaccgcga ggccaccgag 114781 gacgactacc aggcgggcgt ccgcaagcgc caggccgacg cggacgcact cgccgcgagc 114841 cagggcggcg cgggaggcga cgtctcgccc ggtgccatca gctcatccgg ctggaccgcg 114901 ccgctgccgg gagccagcac gagcagcttc ttcgggtacc ggatccaccc gatctaccac 114961 accaagatca tgcacgcggg cgaggacctc gtccgcgggt acagctgcgg cgagacccag 115021 tacgcggccc actcgggcac cgtgagcttc gcgggccgga acggcggcta cggcaactac 115081 atccgcatcg accacggcgg cggcgtctcc tcggcctacg ggcacatcat ggacggcggc 115141 acgctcgtcc gcaccggcca gcaggtcgtc gcgggccagc ccatcgcccg cacgggaacc 115201 acgggcggct ccaccgggtg ccacctccac ttcgagatcc gcatcgacgg gaacgccgtc 115261 gaccccgtgg cgttcatgca cggccagggc gtctccatca ccagcacgca ttgacatgag 115321 gaacgacatg aaccacctcc gcccgaccac ggtcgtcatc tccacgatcg ccgtgggggt 115381 gatcgcggtg tccagcggcg tcgccgccca gaccgcgttc gccgccaccg actacccctc 115441 gtgggccgac gtgcaggcgg cgaaggcgaa ccaggccgac acgcaggcgg ccatcgaccg 115501 cgtgaccgag ctggtcacgg gcctgcagga gtccgcggac cagtcgaaca aggccgcgct 115561 gatcgccggc gagaagtacg ccgaggcgca ggccctgcgc gacgcgaagg cggacgagct 115621 cgcgcgcctg cagaagaagg ccgacgaggc gcaggccacg gccctcacca gccggatgcg 115681 cgccgggctc ctcgcgagcc acctcgcccg agcgggcggc caggacatca ccgcgagcct 115741 cttctcgtcc gacggggagg acgcggagga gctgctgcgc tcgctcggca cgatgtcgaa 115801 gctgtccgag agcacgcagt ccgtgtacca gcaggcgctc gcggatcgca acagcgccgc 115861 gtcgctgagc gaccaggcgc aggtcgccaa ggacgatctc gcccgcctcg cggacgaggc 115921 ccagcaggct ctcgacgacg cgaactccgc cgccgcgacc gcgcaggccg cggtcaccga 115981 gcagacgcgc aacagcgacc agctcatcgc gcagctcgcg ctcctcaagg actccaccgc 116041 ggagatcgag gcgcagtaca tccagagcat cacgcagccg ccgatccccg cggccgcggc 116101 ggccccggcg gcctcctccg ggtcctcgtc cggcggctcg tccggcgggt cgtcgtccgg 116161 cggtggctcc tcatccggcg gcggcggcgg tggtgcgtcg tccggtggcg gtggcggatc 116221 ctcgtccggc ggcggatcga gcgcgcccgc gcccgccccc gcgccccagc agccggcccc 116281 gcagcagccg tcgcgtcccg cgcccgcccc ggcgccggct cccgctccgg cgcccgcgcc 116341 ctccggcaac gccgcgcagg tcgccatcgg gttcgcgaag gcccagctcg gcgagtccta 116401 cgtcctcggc ggtgcgggcc cgaacgtgtg ggactgctcg ggcctcgtga tgatggcgta 116461 ccgcgcggcg ggcatcgacg tcggcagcca ctcggtgagc agccagtacg ccaagatgca 116521 gtcgcagggc cgcctcgtcc cgttctcgca gcgccaggcc ggcgacatca tcttctggaa 116581 cagcggtggc ggcttctacc atgacgccat ctcgctcggc ggggacacca tcatcgcggc 116641 gccgaagccc ggcgacgtgg tgaagatcca gggcctctgg ggcggcagcg acatcatgcc 116701 ctacgtcggc cgacccggct gatcccgccc ggccgcagcc ggcccggctc ctccggacgg 116761 cacacgacga cgcccgcctc accgcatctg ctgcgggggc gggcgtcgtc gtgtcagccg 116821 cgggggctgg agggggtgac ccggatcagg cgtcctcgtc cggctcgccg ccgtggccgt 116881 ggccgtcgcc ctcggcctgg agcttctcga agccggcctg cacgatgcgc tcggcctcgg 116941 ccgcgtcgcc ccagccctcg gtcttgaccc acttgccggg ctcgaggtcc ttgtagtgct 117001 cgaagaagtg ctcgatctcg ttgcgcgtct gctgcggcac gtcgtcgatg tcctggatgt 117061 gggcccagcg cgggtccttc gcggggacgc cgatgacctt ggagtcgatg ccggcctcgt 117121 cgctcatgtt gaagacgccc acggggcgga tggcgacgcc gacgccgggg aagaccgggt 117181 actcgaggag caccagcacg tcgacggggt cgccgtcgag gccgagcgtg ttctcgaagt 117241 agccgtagtc ggtggggtag acgaacgacg tgaagagcac gcggtccagg tacacgcggc 117301 ccgtctcgtg gtcgacctcg tacttgttgc gggacccctt ggggatttcg acgacgacgt 117361 cgtagctggc catgcgcgtg ctcctcgtgg ttctgacgtg ggcggattgc tgccataacg 117421 ttagtggatg ccctccgagc gcccccgtct cacccccgcc gtcgcggacc tcaggcgggc 117481 ggtccgcgag gcgctcgcga cgctccccgc gcagccggcc ggtcccgccc tcgtcgccct 117541 ctccggcggc gccgactcgc tcgcgctggc cgcggcggcc gcgttcgagg ggccgcgcgc 117601 gggcgtcgcc gtgggcgccg tcgtcgtcga ccacgggctg caggacggat ccgccgacgt 117661 cgccgcccgc gccgccgatg ccgcgcgcgc tctcggcctc gcgccggtcg tcgtgacgcg 117721 cgtgcgggtg gacaggagcg cgtccggccc cgaggccgcc gcccgcgccg cccgctacgc 117781 cgcgttcgac gacgcgctcc gggcgaccgg atcccgcgcg ctgctcctcg cccacactct 117841 cgacgaccag gccgagaccg tgctgctcgg gctcgcccgg ggatccggcg ccgccagcct 117901 gcacggcatg gcgcggtcga cgcccgcgcg cacggccggc gccgtccacc tgcggccgct 117961 gctcgggatc cgcgcggcca tcacgcgcgc ggcgtgcgcc gaccagggcc tcgacccgtg 118021 gcaggacccg cacaacgccg acccctccta cgcccgcgtc cgcgtccgcc acgacgtgct 118081 gcccgtgctc gaacgcgagc tcggccccgg gatcgccgtg gccctcgccc gcacggccga 118141 ccagctgcgc gaggacgacg acgcgctcga gcacttcgcc gccgagatgg tcgaggagat 118201 cgcggaccac gccgaggcgg gcatctccct cgaggtggcc tcgctcctcg ccgcgccgcc 118261 cgcgctgcgg caccggctga tccggctcgc cgcgcgcgag gagttcgcgg cgcacctctc 118321 gcggacgcac gtcctggagg tcgcgcggct cgtcaccgac tggcacgggc aggggccggt 118381 cgacctgccg ggcgttaggg ttctacgcaa ggacgagctc atcgtcctca gcgccaggac 118441 gacggaagag tgacatgaga tccaccgaca tcgccgacga cctgaccgag gtcctccaca 118501 cccaggagga gatccacggc cgcatcgccg agatgtgccg cgagatcgag cgcgacaacc 118561 cgggggagga cctgctcctc gtgggcgtgc tgaagggcgc ggtcatggtc atggccgacc 118621 tcgcgcgcga gctcgcgctt cccatccaca tggactggat ggcggtcagc tcctacggct 118681 ccggcaccaa gtcgagcggc gtcgtccgca tcctcaagga cctcgacgcc gacctcaccg 118741 gccgccgcgt gctcatcgtc gaggacatca tcgactccgg cctcacgctc tcctggctgc 118801 tggcgaacct gcgctcccgc ggcgccgcga gcgtcgaggt gtgcgccctg ctgcgcaagc 118861 ccgaggccgc gaagatcgcc gtcgacgtga agtacgtggg cttcgagatc ccggacgact 118921 tcgtggtcgg ctacggcctc gactacgccg agcggtaccg caacctccgc gacgtggcga 118981 tcctcgcgcc gcacgtctac agctgacgcg cgccgctcct cccatccgcc tcttcgccgg 119041 cgcacgttcg gctggcggcg aacaccacgg ccacgctcag acggccgctt gtatcctcga 119101 gacatctcgt cgccgtacgg cgcggcacgg gcagaaaggt gtcgggcccg cgcccctacg 119161 ctcatgaact tcaagaaact cctccgcagc ccgatcctca tcgtcgtcct cgccatcgtc 119221 gtggtgtcgg tgggcttcag cctcatcacc ggatccggct acaagaccat caccacgcag 119281 cacggcctcg agctgatcca ggacggcaag gtcgcctccg ccaagatcat cgacggcgag 119341 cagcgcgtgg acctcacgct cgcgagcgcc gacggcgaca acggcaccat ggtgcagttc 119401 aactacgtcg cgcagcgcgg cggcgagatc gtctccgcca tcacgaccgc gaaccccgcc 119461 gagggcttcg acgaccaggt gccccaaccg agctggttgc tgtcggcgtt cagcatcctg 119521 ctgccgctgc tgctcatcgg cttcttcatc tggatcatgt tctccggcat gcagggcggc 119581 gggaaccgcg tcatgcagtt cggcaagtcg aaggcgaagc tcgcctccaa ggactcgccg 119641 aaggtcacgt tcgcggacgt cgccggggcg gacgaggcca tcgaggagct cgaggagatc 119701 aaggacttcc tcaaggagcc cgccaagttc caggccgtcg gcgcccgcat ccccaagggc 119761 gtgctgctgt acggccctcc cggcaccggc aagacgctcc tcgcgcgcgc cgtcgcgggt 119821 gaggcgggcg tgcccttcta ctcgatctcc ggatccgact tcgtcgagat gttcgtgggc 119881 gtcggcgcga gccgtgtgcg cgacctcttc gagcaggcca agcagaacgc gccggccatc 119941 atcttcgtcg acgagatcga cgcggtcggc cgccaccgcg gtgccggcgt cggcggcggc 120001 aacgacgagc gcgagcagac gctcaaccag ctcctggtgg agatggacgg cttcgacgtc 120061 aagaccaacg tcatcctcat cgcggccacc aaccggcccg acgtgctcga ccccgcgctc 120121 ctgcgccccg gccgcttcga ccgccagatc ggcgtcgatg cccccgacct gcagggccgc 120181 aagcagatcc tcgaggtgca cgggcgcggc aagccgctcg ccgcgggcgt cgacctcgag 120241 gtcctcgcgc ggaagacccc gggcttcacc ggcgccgacc tcgccaacgt cctcaacgag 120301 gccgcgctcc tcacggcgcg ctccaacgcg cagctgatcg acgaccgtgc cctcgacgag 120361 gccgtcgacc gcgtcatggc cggcccccag cgccgcagcc gcatcatgcg cgaccacgag 120421 aagctcatca ccgcgtacca cgagggcggc cacgcgctcg cggcggcggc catgaacaac 120481 acggatcccg tcacgaaggt cacgatcctg ccgcgcggcc gcgccctcgg ctacacgatg 120541 gtgctgccgc tggaggacaa gtactccgtc acccgcaacg agctgctcga ccagctgacg 120601 tacgccatgg gcggccgcgt cgcggaggag atcgtgttcc acgaccccac cacgggcgcg 120661 tcgaacgaca tcgagaaggc cacgtcgacc gcgcgtcgca tggtcaccga gtacggcatg 120721 agcgccaaga tcggatccgt gaagctcggc tccagctccg gcgagccgtt cctcggccgc 120781 gacctcggcg gcagccgcga ctactcggag gacatggccc tcacggtcga cgccgaggtg 120841 cgcgcgctcc tcgacggcgc gcacgacgag gcgtggcagg tcatcaacga caaccgcgac 120901 gtgctcgacc gcctggccac cgagctgctc gagaaggaga cgctcgacca cgaccagctc 120961 gcggcgatct tcgcggacgt gaagaagctg ccgccgcgcc cgcagtggct ctcgagcgac 121021 aagcgcccgc tgtccgacct gcctcccgtg cccatgccgc agaaggcgcc catcgaccag 121081 ggcgtcgtcg acggcgcggt cgactcggag ccgccggccg gcaagccgaa gcgctcgccc 121141 ttcccgcgtc ccgcgacggc gtgacctgag tgggcgtcga ccgggcgcgc atcgaggcgg 121201 ccgtggccga gctgatcctc gcgatcggcg aggaccccgc ccgggagggt ctcgcgacca 121261 ccccggcgcg cgtggccgag gcctacggcg agttcttcgc gggcgtcggc gcggatccgc 121321 tccggcacct ccaggagacg ttcccgctgc ccgagacgga cgcggccccg cagcccgtca 121381 tcgtgacggg catcgcgttc cgctccatct gcgagcacca cctgctgccg ttcaccggcg 121441 tcgcccacct ggcctacgtg ccgggggagc ggatcgtcgg cctcggccgc ctgccgcgcg 121501 tggtcgacga cctcgcctcc cgcccgcaga tgcaggagcg gctgggcgag cagatcgccg 121561 aggcgctcga gcacggcctc ggggcgcgcg gcgtcgccgt gatcctcgac gcggcgcacg 121621 gctgcgtcac cgcgcgcggc actcggcagg ccggcagcac gaccatcacc atcgcggcgc 121681 gcggatcgct cgcggagccg gcggcgcgcg ccgaggtgct cgcgctgctg cccgcggcgt 121741 ccgggcggga ccggccgtga ccacgactcc gcccgtcgcg cgcacgctcg tgatggggat 121801 cctcaacgcc acgcccgact cgttcagcga cggcggacgc cacctcgccc tcgacgacgc 121861 gctcgcgcac gcccgacgga tggtcgctgc gggcgcggac ctcgtcgacg tgggcgggga 121921 gtccacccgt ccgggtgccg cgcgcgtcga cgcagcggag gagcgggcgc gcgtcgtgcc 121981 cgtggtccgc gagctcgccg cggaggggat cgccgtgagc gtcgacacca tgcgcgccgc 122041 gaccgcggag gcctgcgtcg ccgtcggggc gcggatcgtc aacgacgtgt ccggcggtct 122101 cgcggatccg ggcatggccg cggtcgtcgc cggcgccgac gtcgactacg tggcgatgca 122161 ctggcgcggc cacagcgaca tgatggccgc gcgcgcgacg tacgccgaca ccgtgggcga 122221 ggtgcgcgac gagctgctcg cgcgcatcga cgcgctcgtg gccgcggggc tggatcccgc 122281 ccgcgtcatc ctcgaccctg gtctcggctt cgcgaaggac gccgcgcacg actggcagct 122341 gctcggatcc ctcgacgcgc tcacgggcct cggccaccgc gtgctcgtgg gcgcgtcccg 122401 caagcgcttc ctcggacggc tgctgccgga gggtgcgggc gtcgaggacc gcgacgtgcc 122461 gaccgcggtc gtcagcgcgc tctccgcacg agcgggggcg tgggccgtgc gcgtgcacga 122521 cgtcgcgtcc acccgcgccg cgatcggggt cgaggcggcg tgggcgcgcg gccgggccga 122581 ggcgctcgac gccgcatccg ccgggtggtc cgccgccggt ctgtcagagt aggagcatga 122641 gcgccgtgag ccaggaccgt gtcgtcgtcg ccccgcaggc ggtgctcgtc cgcaccgcgg 122701 tcgccgcgct cgtcgcctcc gtgatcctcg gcgtcggcct gaccgtcccg gccgacctcg 122761 ccgccgactc gggcgccgcg gtcgtcgtgg cgaaggtcgt ggccatcgtg ctcgggttga 122821 tcggctcgct cggcagcgcc tacgcatccg tcgtgctgct gtctcccgtg ctcaccaccg 122881 tcggcgccct gctctggccg accgccgtcg tgctgctcgg cacgccgctc ggcatcgtgt 122941 gcgccctcgc cttcgcgccg gtcgcccccg agggcgacgc gtcggacccc gtcctcgcgc 123001 tggtcgccgc cgtgctcgcg gtcctcggga tcgccgccgc gatcgcctgc gccgtcgtcc 123061 agcgccgcgt cgcgcgcctc gccgccaacg cccgccgcgt gaccgagacc ggccgccgga 123121 ccgccgcgat cgtcacagcc gtgcagcgcc tcgacggatc cggcgacgcc gtccgcgcgc 123181 gcctcacggt cgccttcacc gacgccgacg gccgcgacca ccacgtcacg cgcaccgtga 123241 cgacggccga tcgcctgctc cctgccgtcg gcggcaagct gccgctctgg tacgacccgg 123301 ccgacccggg cgacctcccc tccatcgtcg tgggccgctc atggtgacgg gcctcccgac 123361 cgaccgcatc ctcctcaccg gcctccgcgt gcacgcccac cacggcgtct tcgccgagga 123421 gcgccgcgac ggccagccgt tcgtgatcga cctcgaggtc gccctcgacc tcgcgcccgc 123481 gggcggcagc gacgagctcg gccgcacgct gcactacggc gagctggccg acgaggtcgc 123541 cgcggcggcc gagcgcgatc cggtcgacct catcgagacg ctcgccgagc gcgtcgcggg 123601 cgtcgtgctc gcgcatcccg tcgcgcggtg ggtccgcgtc acggtgcaca agccggacgc 123661 gccgatcgcg gtgccgttcg acgacgtggc cgtcgtgatc gagcgggcgt ccgcgctgcc 123721 ggcgccgggg gagaccgtgc gcgcggtcgt ggccgtcgga tccaacctcg gcgaccggcg 123781 ggcgaccatc gagcgcgcgc tggccctaat cgacgaggtg cccggcctcc gcgtcgtgcg 123841 ctcctcggat ctcgtggagt cggtcgctgt gacgcccgcg ggggaggacc cgacgaagcc 123901 cggctacctc aacggcgtcg tgctggtgga cgcggcgatc ggcccgcacg cgctgctcga 123961 cgcgctggcc gggatcgagc gcgacctcgg ccgcgtgcgc gcggagcgct ggggcgaccg 124021 gacgatcgac ctcgacgtcg tcgcgcacgg cgatgcgcgg atccacgacg accgcctcac 124081 gctgccccac ccgcgcgccg ccgagcgcgc gttcgtgctc gccccgtggc tgcaggcgga 124141 tcccgacgcg gagctgcccg gccgcggccg cgtggacgcg ctgctcgcgg cgctcgagcc 124201 cgacgccgcc gatccggccg ccgccgcggt ccccgccgcc tccgccgcgg aggcacgcgc 124261 atgacccgca cgcgctccac caccctcatc gccctcctca tcgccggcgc ggccgtcggc 124321 tggttcgccg agaacgcgct cctcatgagc gggcgcgcgc tcctcatccc gccgctcacg 124381 ctcggggcga cgctcctcat catcggcatc gtgctgctcg cgctcgcccg ccccatccgc 124441 cgctcgacgc tcggccgcac gcccggccgc gtcgacccgt tccgtgccac gcgcgtcgtg 124501 ctgctggcca aggcgtcggc gctcgcgggg gcgctgctca ccggcgtcac cgggggagtg 124561 ctggccttcg tgctggcccg gcccgtgctg cccggcgcgt cctccgtggg gctcgcggtg 124621 gccggtacgg tgggagccgt cgtcctcctc gtcgccgggc tggtcgccga gcactggtgc 124681 acggtcccgc ccgacgaccg ggacgactcg cgccccgggg atccggcgcg cgagctctcg 124741 taggaccccg cggcaccacc gcccgcggga accgcagcac ccagaggagc accgtgaccc 124801 cgaacgtcga cccgcacggc gtctcctggc gccgcgtctc cccgcgcctc gtcggcgtcg 124861 agctggtggg cggcgtgatc accgccctcg tgctcggcgg catcgcggcg ttcctcttcg 124921 ctgtcgacgc gccgcgctgg ctgccgatcg tgctgggcgc cgccgcgctc gtcgagctgg 124981 tggtgacgct cgtgatcgtc ccgcggcgcg tgcgggcgat ggggtaccag ctgcgcgacg 125041 acgacctcgt cttccgccgc ggcatcatgt ggacccgcat cgtcgccgtg ccgtacggcc 125101 ggatgcagct cgtcgacatc acgcgcggcc ccgtcggccg cgtgctcggc ctcgccgacc 125161 tcaagctcgt gaccgcggcg gccgcggcga gcatccagat ccccgggctc acgaacgccg 125221 acgccgagga gctccgcgac cggctggtgg ccctcgccga gacgcgccgg gccgggctgt 125281 gagcgatccg acgcccgagg atccggcggc cggcccgccc gccgccgcgc ccgccgggtc 125341 cgcacccgga ccgggatccg ccgccgtccc cgcggccgag gccctcatcg cggaggagct 125401 gaccgacggc gactggcacc gcctccaccc cgccacgccc gtgctccgcg gcggtgtcct 125461 cttcatcgtc gcgatcggct tcctcgtctc gtccctgcgc gagcagctcg tggagcagtt 125521 cgtgcccggc cagcggcggg acggcgagca ggacctcatc ccgatgctgg tggagaccgg 125581 cagcctcatc tgggtgatcg tcgccctcct cgccttcacc gtgctcgccg tcggcgtctc 125641 ctacctctcg tggcggatgc acacgttccg cgtcaccgag gagaccgtcg aggtgcgcag 125701 cggcatcgtc tcccgcacca accggcgggc ccggctcgac cggatccagg gcgtcaacat 125761 cgtgcgcccg ctcatcgcgc ggctcatcgg cgcggccaag ctcgagattc aggtcgcggg 125821 caacgacgcc aacctgccgc tgcagtacct ccgctcgcgc gacgcggacg cgttccgcct 125881 gcgcgtgctg cggctcgcgt cgggcgcgcg ggccgacgcg gccggatccc gtcccgcggc 125941 ccgcgccgcg gtcggcggca ccgcgcgcgg cttcgtcgga tcccgcgtcg acgacttcct 126001 cgcgcccgag ctcgacccgg acgccgcgcc gccccagtcc gtcgtgcgca tcccggtccc 126061 gcgcctcgtc ggtgccgtgc tcctctcggc gcccacggtc gtgctcgtgc tgttcgtggc 126121 ggtcgggatc ccgctcatcg tccgcttcga ggcctggtac ctgctcgtgc cgctgctgcc 126181 gatgctgctg ggatccgccg gcttcttcgt gcgccgcatc acgcgctcgc tccgctacag 126241 cgtggccggc acgcccgacg gcgtccgggt cgggttcggc ctgctctcga cgagcaacga 126301 caccatcccg cccggccgga tccacgcggt cgaggtcgtc cagccgctgc tctggcgcgc 126361 gtccggctgg tgggagatcc gcatcacgcg cgcctcgcac tcctcgtcgc cgggcgccgc 126421 gggccagcag aacacgtcga tcctcccggt gggcgaccgc cgggacgtcg accgcgtcct 126481 cggcctcgtc ctgcccgacc tcgtgggcga gcaggcactc cggctcgtcg ccgtcggcat 126541 gaccggccgc ggcggggagg acgacggctt caccacgtcg ccgcgccggg cgtggatcct 126601 caagcccttc tcctggcgcc gcacgggctt cgcggtcgac gcgtccgcgt tcctcgtccg 126661 ccgcggcatg atctggcgcc gcctcgtcat cgtcccgcac gcccgcacgc agggggtgga 126721 cctcacgcag ggtcccatcg accgccgcct cgacctcgtc tcggtgcgcg ccgcgacggt 126781 cgccggaccc gtggacacgc ggctcggcgc catcgaccgc gccacgggca tggagctgtc 126841 gacccggctg gtcgcggccg ccgtggcatc ggcccggtcc gacacgtccg cgcactgggg 126901 cgccgaggcc gcgagctggc cggcgccggg atccgcgtcg gccgcggctg ctgcagcgcc 126961 ggccgccgcc gcgcccgcac ctgaacccgc accgccggcc cccgccgcac ccgcacccgc 127021 gccgtcgccc ggccccgtcg acgcaccgcg cgaccccacc cccaccccca cccccgacgc 127081 cgcgtggccg cccccggccg ccgacgcgcc gcgccaccga tccgcccccg aggaccccgc 127141 atgaccgccc cgtcccagcg ctccggccgc ctcggcgtgg gcatcgtcgg cgcgggtcac 127201 gtcggccccg tcctcggcgc ggccctcgcg ggcgccggtc acgcgatcac cggcatctcc 127261 gccgtctccg cggccagccg cgagcgcgcg gaggcgatgc tgccgggcgt cccggtcctc 127321 gagatccccg acctcatcga gcggagcgag ctcgtgatcc tcgccgtccc cgacgccgag 127381 ctccccggcc tcgtcgcggg cctcgccgcc acgggcgcct ggcaagccgg tcagctcgtc 127441 gtgcacacgt cggcggcgca cgggatccag gtgctcgcgc ccgcgttcgc atccggcatc 127501 atcccgctcg ccatccatcc cgcgatgtcg ttcaccggca cgagcatgga cctcagccgc 127561 atggtcgaca gctggttcgc cgtcaccgcg cccgcgcccg tgctccccat cgcccaggtc 127621 ctcgtggtgg agatgggcgg cgagcccgtc gtcgtggagg agcgcgaccg cccggcgtac 127681 gcggaggcca tcgcgaccgc caccacgttc tccaccgcga tcgtcgacca ggccgccggc 127741 ctcctcgcgg gcatcggcgt ggaggagccc ggccgcgtgc tcggccccct catccgctcg 127801 gccgtcgacg acgcgctccg ccgttcctcc ccggcgggcg gcgcgcgcct cacctccggc 127861 gacgtgccgc tgccgacgga cgagggtccc gccgcgcact aacctgtcgt gtccgcgtcc 127921 cgagcccccg aggagcacca cggcatgacg atccccgcgc ccaccgtcgt caccggcatc 127981 gccgagctgc gcgcccgcgt ccgcgaccac cgggccgcgc gcaccgcggc gggcgaggca 128041 cccgtcgtcg tcctcgtccc caccatgggc gcgctgcacg agggccacct ggcgcacgcc 128101 cgccgcgccc gcgagctcgg ctccctcgtc gtcgtctcga tcttcgtcaa ccccctgcag 128161 ttcggcgcgg gcgaggacct cgacgcctac ccgcgcacgc tcgacgccga cgtcgccgcg 128221 ctcgccgaga ccggcgtcga cctcgtcttc gcgccctccg cggccgagat gtacccggac 128281 ggccccgcgc gcatccgcgt cacgggcgga tccgtcgccc tcacgctcga gggccgctcc 128341 cgccccggcc acttcgacgg catgctcacc gtcgtcgcga agctcctgca catcatcgcc 128401 cccgacgtcg ccaccttcgg ccgcaaggac gcgcagcagc tccacctcgt gcgccgcatg 128461 gtgcgcgacc tcgacctgcc cgtccgcatc gaggacctgg agacggtgcg cgagcccgac 128521 ggcctcgccc tctccagccg caaccgctac ctcgacgatc gcgagcgccg cgccgcccgc 128581 gtcatcccgg ccgcgctcga ggccgcgcag agcgccggat cccgcggcat cgacgccgtc 128641 atcgccgccg cccagtccgt ggtgatgggg gagcccgccg tcgcgctcga ctacttccag 128701 gtggtggatc ccgccagctt cgcgtccgtc gacgacggct tccggggcgt cgccctggcc 128761 gtcatcgccg cccgggtcgg gagcacgcgc ctcatcgaca acgagaccgt cgtcatcgcc 128821 tgacgccgcg gcgcatccga tccgcgggcg tgccccggcc ccgcccgcac ctgcgagaat 128881 cgacgggagg ccgctcggcc gccccacgaa accacgaccc gcgaggatcc gcccgcacat 128941 gaccgacagc cccggaacgc ccgcgacgcc cgagaccgcc cccgctcccg ccgtggaggg 129001 atccgccgag gacgtcgccg agcagaaggc cgtgcgcctc gccaagcgcg cccgcctcaa 129061 cgcgcagggc ggccccggcg agggcgcgta ccccgtgcag gtcccggtca ccaccaccat 129121 cccggccgtc cgcgccgagc acggccacct cgagcccggt gaggagaccg accacgtcgt 129181 cggcatcgcg ggccgcgtcg tccacttccg caacaccggc aagctctgct tcgccacgct 129241 ccaggccggc gacggcacgc gcatccaggc catgatctcg ctggccgagg tcggcgacga 129301 ggccctcgcc gcgtggaagg agctcgtcga cctcggcgac cacgtcttcg tcggcggccg 129361 cgtcatcgcg agccggaagg gcgagctgtc gatcatggcg tccgagtggc gcatcgcctc 129421 gaaggccctg ctgccgctgc cgaacctcca ctccgagctc tcggacgaga cgcgcgtccg 129481 cagccgctac ctcgacctca tcgtccgcga tcaggcccgc aagaacgtgc tcgaccgcgc 129541 gaaggtcaac gcctccatgc gcgagacgtt ccggcagcgc ggctacgtcg aggtcgagac 129601 gcccatgctg caggtgatgc acggcggcgc gtccgcccgc ccgttcgtca cgcactccaa 129661 cgccttcgac accgagatgt acctccgcat cgcgccggag ctgtacctca agcgggccgt 129721 ggtcggcggc atcgaccgcg tcttcgagat caaccgcaac ttccgcaacg agggcgccga 129781 ctccacccac agcccggagt tcgcgatgct cgaggcgtac gaggcctacg gcgactacac 129841 ctccatcgcc gagctcaccc agacgctcgt gcaggacgcg gccatggcgg tcgccggcag 129901 ccacgtcgtc acgtgggccg acggcaccga ctacgacctc ggcggcgagt gggaccgcat 129961 ctcgatgtac gcgtcgctga gcgaggcggc ggggatcgag atcacgccgg ccacgagcgt 130021 cgacgagctg caggccatcg ccgaccgcga gggcgtcgac gtccacctca gcacgcacgg 130081 caagctcgtc gaggagctgt gggagcactt cgtgaagggc tcgctcgagc gccccacctt 130141 cgtcctcgac ttccccgtcg agacgtcgcc gcttacgcgc gcgcaccgct ccatcgaggg 130201 cgtcgtcgag aagtgggacc tctacatccg cggcttcgag ctggccaccg gctactccga 130261 gctcgtggat cccgtcgtgc agcgcgagcg cttcgtcgac caggcccgcc agttggcgcg 130321 cggcgacgac gaggccatgc cgctcgacga ggagttcctc cgtgccctcg agcacggcat 130381 gccgccgtcg ggcggcatgg gcatgggggt cgaccggctc ctcatggcca tcaccggtct 130441 cggcatccgc gagaccatcc tgttccccct agtgaagtag aagtaggcga ccatgccatt 130501 aggccccgac ggctcgaacc cgaagaagcc caccaccgcg cgctacgccc tctggatcat 130561 cgtgggcggc atcgccgtcg tcatgatcgg ccagggcgtc tacggcatcc tcacctagag 130621 cgcggcgtat cctcatcaca tggatgattt ctgggcgagc gcgatctggt cgatcctccc 130681 caccctcggc gtgggcctga tcttctggtt catcatgcgc gcggtcatcc aggcggacaa 130741 gcaggagcgc aaggcctacg ccgccatcga ggcgaaggag cgcgcccgca tgggcgtgcc 130801 cgcgcccgac gccgacctct agggcctgcc gccgaccccg ggcggcccct cccgcggagc 130861 ccgatccgcc gcactgcgca tcgcgtcacg cccacggcga acaggggcat gcactcgtcg 130921 aacccgtcgt tactctctac atatcggcgc cggccccctg ccccggtgcc cagggagata 130981 cagatgttcg agagattcac cgaccgcgct cgtcgcgtcg tcgtcctggc ccaagaagag 131041 gccaagatgc tcaaccacaa ctacatcggg accgagcaca tcctgctcgg actcatccac 131101 gagggcgaag gcgtggccgc caaggccctg gagtcgctcg gcatctccct cgatgccgtc 131161 cgcgaacagg tccaggacat catcggccag ggccagcagc agcccacggg tcacatcccg 131221 ttcacgccgc gcgcgaagaa ggtcctggag ctgtcgctcc gcgaggccct ccagctcggc 131281 cacaactaca tcggcaccga gcacatcctg ctcggcctga tccgcgaggg cgagggcgtc 131341 gccgcccagg tgctcgtcaa gctcggcgcc gacctcaacc gcgtgcgcca gcaggtcatc 131401 cagctcctgt ccggatacca gggcaaggag gcggtcgccg tcggcggcga ggcgcagcag 131461 agccagcagg ctggctccac ggtcctcgac cagttcgggc gcaacctcac gcaggcggcg 131521 cgcgacggca agctcgaccc cgtcatcggc cgcgagaagg agatcgagcg cgtgatgcag 131581 atcctgtcgc gccgctccaa gaacaacccc gtcctcatcg gcgagcccgg cgtcggcaag 131641 accgccgtcg tcgagggcct ggcgcaggcc atcgtcaagg gcgacgtccc ggagacgctg 131701 aaggacaagc agctctacac gctcgacctc ggctcgctca tcgccgggtc ccgctaccgg 131761 ggcgacttcg aggagcgcct caagaaggtc accaaggaga tccgcacgcg cggcgacatc 131821 atcaccttca tcgacgagat ccacaccctc gtcggcgcgg gcgccgccga gggcgcgatc 131881 gacgcggcca gcatcctcaa gccgctcctc gcgcgcggcg agctgcagac catcggcgcc 131941 accacgctgg atgagtaccg caagcacttc gagaaggacg cggccctcga gcgccgcttc 132001 cagcccatcc aggtgcagga gccctcgctg ccccacacca tcaacatcct caagggcctg 132061 cgcgaccgct acgaggcgtt ccacaaggtg tccatcaccg atggcgccat cgtctcggcc 132121 gcgaacctgg cggaccgcta catcgcggac cgcttcctgc ccgacaaggc catcgacctg 132181 atcgacgagg ccggcgcgcg cctgcgcctc tcgatcctgt cggcgccacc ggagctccgc 132241 gagttcgacg agcgcatctc cacggtccgc gtggccaagg agaccgccat cgaggaccag 132301 gacttcgaga aggccgcgag cctgcgcgac gaggagaaga acctcctggg cgagcgcctc 132361 cggctcgaga agcagtggcg ctcgggcgac gtccgcacca ccgccgaggt cgacgagggc 132421 ctgatcgccg aggtcctggc ccaggccacg ggcatccccg tgttcaagct cacggaggag 132481 gagtcctcgc gcctcgtctt catggagaag gccctgcacc agcgggtcat cggccaggag 132541 gaggccatct cggccctgtc caagaccatc cgccgcaccc gcgccgggct gaaggacccc 132601 cgtcgtccct cggggtcgtt catcttcgcc ggccccacgg gcgtcggcaa gacggagctc 132661 gcgaaggcgc tggcggagtt cctcttcgac gacgaggacg ccctcatctc gctcgacatg 132721 agcgagtacg gcgagaagca caccgtgagc cgcctcttcg gcgcccctcc cggattcgtc 132781 ggcttcgagg agggcggcca gctcaccgag aaggtgcgcc gcaagccgtt ctccgtggtg 132841 ctcttcgacg agatcgagaa ggcccacccg gacatcttca actcgctgct ccagatcctg 132901 gaggagggac gcctgacgga tggccagggc cgcgtggtcg acttcaagaa cacggtcatc 132961 atcatgacca ccaacctcgg caccaaggac atcacgggcg ccccggtcgg gttccaggtc 133021 gagaacaacg ccgcgaactc ctacgagcgc atgaagggca aggtcagcga ggagctgaag 133081 aagaacttca agcccgagtt cctcaaccgc gtggacgaca ccatcgtgtt cccgcagctg 133141 tcgaagcccg agctgctcca gatcgtcgac ctgttcgtga agcgcctgtc ggaccgcatg 133201 atggaccgcg acctcacgat cacgctcgag accgccgcga aggagcgcct catcgaggtc 133261 ggcttcgacc cgtcgctcgg cgcgcggccc ctccgccgcg cggtgcagca cgagatcgag 133321 gaccgcctgt cggagcgcat cctgcagggc gagctcaacg cgggcgacca cgtgcacgtg 133381 gactacgtgg acgaccagtt cacgttcgtc accacgcagc gcgagggcat ctcggtcgcg 133441 gccgggatcg gcacggggac cggcacgccg gacctcgcca tcaccagcga gtagcgcgca 133501 gcacgaccac cacggcccgt cgtccccgag agggggcggc gggccgtcgt cgagtccgcg 133561 ggctgcgggt gtcctccatc ccgctgtcgc ctcctcgggc ggcgggccag gatggacttc 133621 gggcggaacc gccccactaa ggagatgcca cctgatgaga atcgccgtca ccggaggctc 133681 ggggaagctc ggccgccacg tcgtcgccga cctgcgcgcc cacggacacg aggtcaccaa 133741 catcgaccag gtgggggagc gcggatcggg ctacgtccgt gtcgacacca ccgactacgg 133801 gcaggtggtg gacgcgctgt tcggcgtcca ggacctgcac gaggggttcg acgccatcgt 133861 gcacctcgcc gcgatcccgg cccccgcgat cctgagcgac gtggccacgt tccacaacaa 133921 catgctcacg agcttcaacg tcttccaggc cgcgcgccgg gcgggcatca agaaggtcgt 133981 ctacgcatcc agcgagaccg tgctcgggct cccgttcgac gtgccgccgc cgtacatccc 134041 cgtcgacgag gagtacccgg cgcagccgaa cagcacctac tcgctcgtga agcacctcga 134101 ggagcagatg gccatcgagc tgtgccgctg ggatccggag ctgcaggtca cggcgctccg 134161 cttctccaac gtcatggacg tcgacgacta cgacgggttc cccgggttcg acgacgacgc 134221 gctcgcgcgc aagtggaacc tgtggggcta catcgacggc cgtgacggcg cccaggccgt 134281 gcgcaaggcg ctcgagcacg acgccccggg cttcgaccgc ttcatcgtcg ccaacgccga 134341 taccgtgatg agccgctcgt ccgccgagct cgccgccgag gtcttccccg gtgtcgaggt 134401 cacgaaggag ctgggcgagc acgagacgct gctgtccatc gacaaggccc gccggatcct 134461 cggctacgcg cccgagcaca cctggcgcga ccatgcgccg gccgacgcgg gcgacgaccc 134521 ggtcgcgggg cacccctcat gaggtatgtc cgcctgggca gcaccggcac cgaggtctcc 134581 gcgatcgcgc tcggctgcat gagctacggc gagccgacgc gcggcggcca cgcgtggacg 134641 ctcggcgagg aggactcgat cccgctcatc cgccgcgcgg tcgagctcgg gatcaccttc 134701 ttcgacacgg cgaacgtgta ctccgacggg tcgtgcgagg agatcaccgg ccgcgcgctg 134761 aaggcgatga cgaagcgcga ggaggtcgtc atcgcgacca aggtgcacgg cgcgatgggg 134821 gaggggccga actcgcgcgg cctgtcccgg aagcacatca tgtggcagat cgacgagagc 134881 ctccggcggc tcgggaccga ctacgtggac ctgtaccaga tccaccgctt cgacccggcg 134941 accccgctcg aggagacgct cgaggcgctc gacgacctcg tgcgcgtcgg caaggtccgc 135001 tacatcggcg cctcgtccat ggacgcctgg cggttctcga aggcgctgca cctgcagcgg 135061 gcgaatggat gggcgcgctt cgtcacgatg caggaccact acaacctcgt gaaccgcgag 135121 gaggagcgag agatgctccc cctgtgcgcc gacgagggcg tgggatccct gccgtggagc 135181 ccgctcgccc gcggccgcct cacccgcgac tgggacgcgt ccaccgcccg cagcgagacg 135241 gacgagttcg ggaagacgct ctacgcggcc caggaggact cggaccgccg ggtcgccgcc 135301 gcggtggccg aggtcgccga ggcgcgcggt gtcccgcggg cgcaggtcgc cctcgcgtgg 135361 gtgtcgcgga acccggtcgt cacggcgccc attgtgggcg gcacgaaggt ggcgcacatc 135421 gaggacgccg tcgcgtcgct ggacatcgag ctgacggccg acgaggtcgc ccggctcgag 135481 gagcactacg tgccgcacgc ggtcgtcggc tactagccgc ctcgggaccg cccgcgcccg 135541 ccgacttgcg cgggcggtcc cgcatcacct aacctgaacg gagccacaga ccgctggtcg 135601 tcgtcgtgac cccgcgaggg gatgcgccgg acgaaggttc actcaggtga aggcccgcgc 135661 aggtgatcga agcacgatgc agcgcatgcc ctgagggcct gcgcgacact cccgctccgg 135721 cctcctgtgc cggagcgttt ctcatgtgtg cagccggggg ctgccagcac ctcgcaccgc 135781 ttccgcggtg tcggggaacc acgtgataag gagtgccatg gcgaacaagg aagcctcggt 135841 cgccgagctc gcggagaagt tccgcagctc gaacgccgta ctgctcaccg agtaccgcgg 135901 tctcaccgtt gcccagctca agcagctgcg gaagagcatc agtgcagacg cgacctacgc 135961 cgtggtgaag aacacgctga ccaagatcgc ggcgaaccag gcggggatct cgtcgttcga 136021 cgacgagctc gtcggcccgt ccgcgatcgc gttcgtgcac ggcgacaccg tcgccgtcgc 136081 gaaggctctg cgcaccttca ccaaggccaa ccctcttctc gtcgtgaagg gcggttactt 136141 cgacggcaac cccctgacgg cggacgaggt gaacaagctc gccgacctcg agtcgcggga 136201 ggtgctgctg ggcaagctcg ccggcgcctt caaggcctcg ctcttcggcg cggcgtacct 136261 gttcaacgca ccgctctcgc aggccgtacg caccgtcgag gcgctgcgcg agaagcagga 136321 atcggctcag tagcacccct cgggtcccgt tcccggggcg cgatgcactg atccaccaga 136381 caccacacca acccaaggag aatcaccatg gcaaagctct ctaacgacga gctcatcgag 136441 gccttcaagg agctcacgct catcgagctc agcgacttcg tcaagaagtt cgaggaggtc 136501 ttcgaggtca ccgccgcggc gcccgtcgcc gctgccgccg cccccggcgc cgctgcaccc 136561 gccgaggagg tcgaggagaa gaccgcgttc gacgtcatcc tcgaggccgc cggcgacaag 136621 aagatccagg tcatcaagga ggtgcgcgcc ctcacgagcc tcggtctcgg cgaggcgaag 136681 gcgctcgtcg acggagcccc caaggccgtc ctggagggcg ccaacaagga ggccgccgac 136741 aaggccaagg cgcagctcga ggccgcgggc gcgacggtca ccgtcaagta gctcgcagca 136801 ccgcacagcg ctcagggcgc cgatcccctc gggggtcggc gccctgcgtc gtccccgggg 136861 cttgtccggt caggcggacc ccggccgcag gtcgtgtccg agggcgcgtg cccgctccac 136921 ggcctcggag cgcgaccgcg cgtcgagctt ccggtacgcc gtgcggatgt gcgacttgac 136981 cgtgttgggg gagatgaaga gccggccggc gatctgcgtc acggtcagcc cgtcggccag 137041 gcacgcgacg atgatgcgct cgcggtcggt cagcggttcc accggggcgg cctccacgcg 137101 cacctggccg gcgcggacgc cctcgagcac ctcgcgcacg tcggggtgct gatcccgcgc 137161 cagcgcccgg tcgagcagcg cgtgcgatgc cgcggcgggg aacaccgcga agggccggag 137221 cacgccggtc gacacggcgt ggagcgccgc gcggtcgaag gcgtggtcgc tccgtgcgtg 137281 gtcgccgagg ccgtggtgcg cggccgcgac cacgagcagg acgtcgtcga gggtgcgacc 137341 cgagtgcgcg tcgccgagcg cgaggcactc ggccatctgc gcgagggcgc cgacgtggtc 137401 gtcggcctgc acccgcagcc gtccggcgat catggccggg cacgtggagt gctgcgccgt 137461 cggctgcagc atgcggagga ggtcccacgc cgcggcgggc tggtccaggt gcgcgaggag 137521 ggacgcccgc agcgtgtcgc gcatggtcgg catggggccg tgctccgccc agcccacgcc 137581 gaggttgtgc agccgacgca ggtgctcgag cgcatcgagc cgcaggcccc ggatcgccgc 137641 gaccgtcgcc tccgcgtagc gggcgagcag ctcccagtcg gtgccgtcgc tcgcgggacg 137701 gaggccctcg acgatgagca tcgcgtcgtc ctgccgcgtc tcgtcgaccg cgatcatcgc 137761 ggcggcgatc tccgccggcg cgaggaaccc gctgcgggac agggccggat ccgcccccgg 137821 cgacgcgagg agcccgcggg cgcgcacgac gagatcgcgc gcctcctcga tctcgcccag 137881 gcagtaggcg aggtacgcga gcgcgccgcg gcactccagc cggtcggcca gcacgaggtg 137941 ccgctcgccc aggccctccg cgatgcggag ctcctcgcgc gcgccgacga agtcgccgag 138001 gtgggtgagc acgagcccgt gctgcagggc cacgcgggcc tggagggtga tgcgctcctg 138061 gagcgggatc ccgcgctcgg tgtcgaggat cccgcgcgcc tcgtcgaggg agtcgcgcgc 138121 ctcggccagc cggcccaccc ggcggtcgcc cgcggcgcgg tgcacgagga ccgcggcgcg 138181 cgtcggggcg ccgggcgcgg gatccgcggt gagcaggagg tcgagcgcgg agcggtaggc 138241 gatcgacgcc cgccggtcgg atgcgaccgc gccgcggtac gtggcggcca tgccggtgac 138301 gagccagacg tcgtcctccc accgctcggg gtcgagccgg tcgtaaaggg cgcggatgcg 138361 gtcggagtgg aggtcgacgt gcagcggcca tccgtcggcg aggagggtcg ccgcctgcgc 138421 gtcggcgccg ccgtccagcg cgtcgccgat cgcgcgctcg aggccgtcga tggtcggcgc 138481 gtcgctcatc atggcccccc ggcgcgggtt ccccgggggc gggctgccag cgtggctcca 138541 cgctacgtcc cggcgggcgt ccgggtcgag gtgcccgcgg tcaccttccg ttcgcggaca 138601 tcgtgacggg ggatgcgaca tacgcatagc ctggctatat gattggggca tgaccgatca 138661 cgacctgcgc accctgctgg gcgacctggt gaccgccggg caccgcctca cgcgcctcgc 138721 cgcgcacgag gtcggcggct cgagctcgcc cgccgtctgg cggaccctgt ccgtgctggt 138781 gacgtggccc ggcgggatgc gcctcggcgt gctcgccgag cgcagccggg tctcgcagcc 138841 cacgaccacc aagatcgtcc gctcgctcgt cggccagggc tggatcgcgc aggtgacgga 138901 cccgtccgac gcgcgcgcgt ccctgctcga gatcacgccg gccggccgcg ccgcgctcga 138961 cgactggcgc gaccgcctgg ccaccgcgct cgtgccgcgc ttcgccgacc tcccggccga 139021 cgacgtggcc gtgctcgcgc gggccgtcga ggtggtcatg tcgcgcatcg acggcgcccc 139081 ggcttccgcg cgcgactgac cgcggtcgcc cgtcggcacc gccaggcacc gcgccccacc 139141 gcaccaccca cccatccatc cgcaccgatc ccaggaggcg acaccgcacc cgtgtccacc 139201 cagcagcacg cgtcgttccg cgacatcttc cgccagcccc gttccgtctt cgccgtcgcc 139261 ttcgcgtgcg tcatcgcgtt catgggcatc gggctcgtcg acccgatcct ccccgccatc 139321 gcctcgagcc tcgacgccac cgccaccgag gccgagctgc tcttcacgag ctacctgctc 139381 gtcaccgggc tcgcgatgct catcaccagc tggatctcca gccgcatcgg cgccaagcgc 139441 accctcctca tcggcctcgc gatcatcgtg gtcttcgccg cggcggccgg cctctcgcag 139501 gacgtggagc aggtcatcgg cttccgcgcc ggctggggcc tcggcaacgc gctcttcatc 139561 tcgaccgcgc tcgcgaccat cgtcggatcc gcgtccggcg gcaccgcgtc cgcgatcatg 139621 ctctacgagg cggcgctcgg cctcggcatc gcgatcggcc cgctgctcgg cggcctcctc 139681 ggcagctgga gctggcgcgg tccgttcttc ggcaccgcga cgctcatggc cgtcggcttc 139741 gtcgcgatcc tcgccctgct cgggaaggac gacgcgcccc gcgcgcccat gcgcctgtcc 139801 gccccgctgc gcgcgctccg taccccggcc ctcgcggtgc tcgccgcggc cgcgctgttc 139861 tacaacatcg gcttcttcga gctgctcgcc tacacgccgt tcccgctggg cttcgacgcc 139921 atcggcctgg ggctcacctt cttcggctgg ggcgtgggcc tcgcgatcac ctcggtgctc 139981 gtggcgccgc tcctcacccg gcgcatggcg cgcacctcgg tcctccggct catgctcccg 140041 ctcctcgcgg tcgatctcgc ggcggccggc ctcgtggtcc gctcggcggc cggcctcgtg 140101 acctgcgtga tcgtcggcgg cctgctcctc ggcgtcctca acaccgtgct caccgagtgc 140161 gtgatggagg ccaccgacca cccgcggagc gtcgcgtcct ccgcctactc gtcggtgcgg 140221 ttcctcggcg gtgccatcgc cccgcccgcc gcgaccgagc tcgcgaacct cttctcggac 140281 gcgacgccct actacgccgc ggctggatcc gtgctcgtcg ccctcgtcat cgtggtcgcc 140341 ggacaccgct ggctgcgctg cgtcgacgcc gagccggtcg atgccctcga ggaggcgcag 140401 gcggtcacgg cgggggacgc ctgacccgcg gtccccgcat ccccggcgcc ttcgccccgc 140461 cctcgatccc gcccgccctc acggcgccgg cggggccggg ggcgccgtcg tgctcgagcg 140521 cgcctggaag tcgacgggca gcgtcacggc gcgctcggcc gcgccctccg gcgcgagccc 140581 ctccaacacc atgcccacgg cggcccgccc ctgcgtccgc gggtgctgct cgaccgtcgt 140641 caggccgaac aatggcgcga gcgcgtgccc gtcgatcccg gcgaccgaga gctcggcggg 140701 cacggcgatg cccagctgcc tggccgcgag gatcgtcccg atggcgatct cgtcggaggc 140761 cgcgaagacc gccgtcggcc gggtccgcgg atccgcgagc agcgccatgg ccgagcggaa 140821 gccgccgtcg atcgtgaact ccgccgtggc gaaccgggcc tcgaggccgc gaggatccgc 140881 gtcgatcgcc gcccggtagc cggccagccg cttcgcgtgc acgaagaacg ccatctgcgc 140941 gtgcagatcg ccgccgaggt gcacgacgcg cgcgtgcccg aggctcagga ggtgctccgt 141001 ggcgaggcgg gccgcggcct cgtcgtcgat gctcagcgtg ctcatgccct cgaccgggcc 141061 gccgatcccg acgagcggct tgtcgagcgc gcggagccgc acgacctccg cgggcgtgag 141121 cgcgacgctc accgcgatga ccgcatccac gcgcttgcgc acgaggaagt actcgaagac 141181 cttccggcgc tgctcgggat ccgcggtgag gcggtacagc gtgaggtcgt agtcggcctc 141241 gatcagcgcc tcctcgatcc cctcgagcag ctccgcgaag aaccagcggt tgatgaacgg 141301 catgacgacg cccacgttct tcgactggcc ggtcacgagg ctcgacgcgt tcgaggagac 141361 gacgtacccg atctccgcgg cggcatcgga gacgcgggtg cgcgtcgcgg gggagacgta 141421 gccgcggccg ctgagcgcgc gcgacgcggt ggccttggag accccggcca gccgggcgac 141481 gtcggcgat