| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99082846
Identifier: 99082846
GI number: 99082846
Start: 3174737
End: 3175513
Strand: Direct
Name: 99082846
Synonym: TM1040_3006
Alternate gene names: NA
Gene position: 3174737-3175513 (Clockwise)
Preceding gene: 99082845
Following gene: 99082847
Centisome position: 99.18
GC content: 60.49
Gene sequence:
>777_bases ATGATCGAAGTCACGCAGGGGTCTTCTCCGCTGGTTCTGGGGCTGCCCCATACGGGCACCGATGTTCCGGCCGAGGTGGC ACAACATTTGAATGACCGCGGCCAAGCGCTCGCGGATACGGATTGGCATATTCACGACCTCTACGCCGGACTGGTGGAGG GCGTGACAACCGTACGCACGCCGATCCATCGATATGTGATCGATGTGAACCGCGATCCCGAGGGCGTGAGCCTTTATCCC GGACAAAACACCACGACTCTGGTGCCGCTCACCGATTTTGATGGTCATCCAATCTGGCAGCAAGAGCCCGATGCGGCCGA AACGGCCCACCGTCTTGAGACCTATCACGTGCCTTATCACGCGGCACTCGAGGCGGAGATGAAGCGCGTGGCCGGACTCC ACGGGTTTGCCATTCTCTATGATTGTCACTCGATCCGTGGCGATATTCCCTTCTTGTTTGAGGGTCGCCTGCCGGATTTT AACGTCGGTACCAATCTCGGCGCGACCTGCGCGCCAAGCATCGAGGATATGGTGTTCCAGCGTTGTCAGCGCGCGGAAGG CTACACATCAGTCTTGAATGGCCGTTTCAAGGGGGGCTGGACCACGCGACATTACGGTCGCCCCGACCAGGGTTGGCATG CCATCCAGATGGAGCTCGCGCAGGCCACCTATTGCGACGAGCAGCCGCCCTGGCGGTATGACCCCGTCCGCGCCGACCGG TTGCGCGGACATCTCACCCAAATCCTCACCGATCTGACCGAATGGAGGCCCGCATGA
Upstream 100 bases:
>100_bases GCCTTGGCGAGGACCGCTATCTTGCGCCGGAAATCGAAACCGCCAGCGCGATGGTGCGGGCAGGCCGCGTGGCGCAGGCC GCAGGCGTGGAGGTCAGCAC
Downstream 100 bases:
>100_bases GCGATCCCCGCAAGAATACCCGTGACATTTTCCCTGCCACTGGCACCGAGATCACTGCGAAGTCCTGGTTGACGGAGGCT CCGATGCGGATGCTGATGAA
Product: N-formylglutamate amidohydrolase
Products: L-glutamate; formamide
Alternate protein names: N-Formylglutamate Deformylase; Hydrolase; N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Superfamily; Formiminoglutamase; Formylglutamate Amidohydrolase; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Histidine Degradation; HutG Protein; N-Formylglutamate Deformylase Family Protein; Formylglutamte Amindohyrolase; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHIHDLYAGLVEGVTTVRTPIHRYVIDVNRDPEGVSLYP GQNTTTLVPLTDFDGHPIWQQEPDAAETAHRLETYHVPYHAALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDF NVGTNLGATCAPSIEDMVFQRCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQMELAQATYCDEQPPWRYDPVRADR LRGHLTQILTDLTEWRPA
Sequences:
>Translated_258_residues MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHIHDLYAGLVEGVTTVRTPIHRYVIDVNRDPEGVSLYP GQNTTTLVPLTDFDGHPIWQQEPDAAETAHRLETYHVPYHAALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDF NVGTNLGATCAPSIEDMVFQRCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQMELAQATYCDEQPPWRYDPVRADR LRGHLTQILTDLTEWRPA >Mature_258_residues MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHIHDLYAGLVEGVTTVRTPIHRYVIDVNRDPEGVSLYP GQNTTTLVPLTDFDGHPIWQQEPDAAETAHRLETYHVPYHAALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDF NVGTNLGATCAPSIEDMVFQRCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQMELAQATYCDEQPPWRYDPVRADR LRGHLTQILTDLTEWRPA
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.3.8
Molecular weight: Translated: 28972; Mature: 28972
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHIHDLYAGLVEGVTTVRT CEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH PIHRYVIDVNRDPEGVSLYPGQNTTTLVPLTDFDGHPIWQQEPDAAETAHRLETYHVPYH CCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHH AALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDFNVGTNLGATCAPSIEDMVFQ HHHHHHHHHHHCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQMELAQATYCDEQPPWRYDPVRADR HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LRGHLTQILTDLTEWRPA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHIHDLYAGLVEGVTTVRT CEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH PIHRYVIDVNRDPEGVSLYPGQNTTTLVPLTDFDGHPIWQQEPDAAETAHRLETYHVPYH CCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHH AALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDFNVGTNLGATCAPSIEDMVFQ HHHHHHHHHHHCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQMELAQATYCDEQPPWRYDPVRADR HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LRGHLTQILTDLTEWRPA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-formimidoyl-L-glutamate; H2O
Specific reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA