| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082819
Identifier: 99082819
GI number: 99082819
Start: 3143290
End: 3144138
Strand: Direct
Name: 99082819
Synonym: TM1040_2979
Alternate gene names: NA
Gene position: 3143290-3144138 (Clockwise)
Preceding gene: 99082818
Following gene: 99082825
Centisome position: 98.2
GC content: 61.13
Gene sequence:
>849_bases GTGAGCGGAGCTATTTTGTCAGGACCTGAGCAAAAACCAGATCAGGATGATATTGAAACAGCCCTGTTTCGCCATCTGGC GCAGCAGGGCTGGTGTTTGTCTGCCCCCACGCCACTGGCGGGGGGGCGTAGCAATCACGTTTGGCGCGCGGGGGACAAGG TCGTAAAGCTCTATCGCAGCGATGCACATAACCCGCTTTTCGCAAATGACCCCGATCGGGAACGAGCGATGTTGCGGGCG CTGAGCGGCACGGGCATGGCGCCGCGTTTTTTGGCGCATGGTCTGTGGCAAGGTCAGGCGTGGCTGATGTACACACATGT CTGTGGTGCGCGGTGGGAGAGCGATCCCAGCCATGTCGCGCGGATCTTGAGCATCGTACACGATCAGGCCAAACCCCGAG GGTTGCCATTTGGATGCAACGGGTCTGAGGCGCTTGCACAGCAGACCCGACAGATTGTGTCGGCTGCATCGCAGGGCACT ACGCTTTTGGACCGGGCGCCCCAAGGCGTCGTGCCGCCGACCTCACAGCTTTGTCTCATTCATGGCGACCCGGTGCCGGG GAATATCGTGGCGCACAATGGGACCCTGGCGTTGATTGACTGGCAATGCCCCCAACTGGGAGATCCGGCAGAGGATCTGG CCTTGTTTTTGTCGCCTGCAATGCAGCTCGCGTATCGCGGGCGAGTCCTCTCTCGGCAAGAGGAGGCGGAATTCGTCACC GCCTATCCGCATCCGCGGGTTGTTGCGCGGTATTACGCGCTAAAGCCATGGTTCCATTGGCGGATGGCGGCCTACTGCGC GTGGCGTGGTGAGACGGACGCGCGGGATCTGGAGCTCGCGGAAATCTAG
Upstream 100 bases:
>100_bases ACCTCGGTGACGGCGCTGCGTGATCCAACCAGTTCCTCTGGCAATTCCTGATTTGCGACGTTAACCGGGCCTTGTAATCG CCAAGGAAGCGGGGGATCCG
Downstream 100 bases:
>100_bases TCCAAAAGACTCAACAGTCCGTAGGCCGGTGGCATCAGCAAGCGTCTCGCGCGCCCCAGTGGAAAGCGTGGCATGCGCTG CATCACCTTTGAATAGGGCA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase Family
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRSNHVWRAGDKVVKLYRSDAHNPLFANDPDRERAMLRA LSGTGMAPRFLAHGLWQGQAWLMYTHVCGARWESDPSHVARILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGT TLLDRAPQGVVPPTSQLCLIHGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLSPAMQLAYRGRVLSRQEEAEFVT AYPHPRVVARYYALKPWFHWRMAAYCAWRGETDARDLELAEI
Sequences:
>Translated_282_residues MSGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRSNHVWRAGDKVVKLYRSDAHNPLFANDPDRERAMLRA LSGTGMAPRFLAHGLWQGQAWLMYTHVCGARWESDPSHVARILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGT TLLDRAPQGVVPPTSQLCLIHGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLSPAMQLAYRGRVLSRQEEAEFVT AYPHPRVVARYYALKPWFHWRMAAYCAWRGETDARDLELAEI >Mature_281_residues SGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRSNHVWRAGDKVVKLYRSDAHNPLFANDPDRERAMLRAL SGTGMAPRFLAHGLWQGQAWLMYTHVCGARWESDPSHVARILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGTT LLDRAPQGVVPPTSQLCLIHGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLSPAMQLAYRGRVLSRQEEAEFVTA YPHPRVVARYYALKPWFHWRMAAYCAWRGETDARDLELAEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31128; Mature: 30996
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRSNHVWRAGDKVVKLYRS CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEECCHHHHHHHHHH DAHNPLFANDPDRERAMLRALSGTGMAPRFLAHGLWQGQAWLMYTHVCGARWESDPSHVA CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCHHHHH RILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGTTLLDRAPQGVVPPTSQLCLI HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEE HGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLSPAMQLAYRGRVLSRQEEAEFVT ECCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCHHCCCEEE AYPHPRVVARYYALKPWFHWRMAAYCAWRGETDARDLELAEI ECCCHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure SGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRSNHVWRAGDKVVKLYRS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEECCHHHHHHHHHH DAHNPLFANDPDRERAMLRALSGTGMAPRFLAHGLWQGQAWLMYTHVCGARWESDPSHVA CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCHHHHH RILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGTTLLDRAPQGVVPPTSQLCLI HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEE HGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLSPAMQLAYRGRVLSRQEEAEFVT ECCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCHHCCCEEE AYPHPRVVARYYALKPWFHWRMAAYCAWRGETDARDLELAEI ECCCHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA