| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082788
Identifier: 99082788
GI number: 99082788
Start: 3117624
End: 3118148
Strand: Direct
Name: 99082788
Synonym: TM1040_2948
Alternate gene names: NA
Gene position: 3117624-3118148 (Clockwise)
Preceding gene: 99082782
Following gene: 99082789
Centisome position: 97.4
GC content: 54.86
Gene sequence:
>525_bases ATGACAGACGCTGTAGCTGATGTAGAAACGGATCAACCGGCGAAGAAGAGCAAGATGCCCCTTATCATAGGGCTCGTACT TGGAATCGCAGGCGCAGGAGGCGGTTTTTATGCCGTCCAGTCAGGCCTTCTTCCCTTTGGTAACACACCCGCGCCCGAAA TGGCGCAGGCCACCAAAGAGGCGCCAGAAGGCGTGGACAAAGGTGAGTCGGCGGAAGAGATCGCCAATCTCGCCTTTATT GAAATGGAGCCAATTGTTGTCACACTGAATAGAGCCAGTGGGGTCCAGCAACTTCGGTTCCGAGCGCAACTTGAGGTCAA TCAAGCCGATCAGGATGAGGTTGAAACAGTCCTCCCCCGGGTTGTCGACGTTCTGAACAGCTACCTGCGGGCGCTAGAGC TGGAGGATCTTACCGATCCGATGGCACTGCCAAAACTGCGGGCACAGATGCTACGGCGAATCAATATCGTAACCGGTCAG GGCCGCGTGCGTGATTTGCTGATCATGGATTTCGTACTCAACTAG
Upstream 100 bases:
>100_bases GCGTTCTCTCCGGCCTGCAACCCTTTTCTCCGATTGGCCTTAACATTCGGTTAGTTCCTGTCGGGTTATGAACAGGGTGC ACGACGTTTTAGGGATAGCC
Downstream 100 bases:
>100_bases GAGGACAGGATGGAACTTATAGCTGATATCCTGCTTGCGGCCGGAGCACTGGGTGCCGGGTTTTATTGCCTGGTGCTGTC GCGCCGACTGAAACGCTTTA
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKEAPEGVDKGESAEEIANLAFI EMEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPRVVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQ GRVRDLLIMDFVLN
Sequences:
>Translated_174_residues MTDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKEAPEGVDKGESAEEIANLAFI EMEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPRVVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQ GRVRDLLIMDFVLN >Mature_173_residues TDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKEAPEGVDKGESAEEIANLAFIE MEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPRVVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQG RVRDLLIMDFVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18871; Mature: 18740
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKE CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH APEGVDKGESAEEIANLAFIEMEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPR CCCCCCCCCCHHHHHHHHHEEECCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH VVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQGRVRDLLIMDFVLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKE CCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH APEGVDKGESAEEIANLAFIEMEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPR CCCCCCCCCCHHHHHHHHHEEECCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH VVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQGRVRDLLIMDFVLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA