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The map label for this gene is erfK [C]

Identifier: 99082738

GI number: 99082738

Start: 3068040

End: 3068657

Strand: Direct

Name: erfK [C]

Synonym: TM1040_2898

Alternate gene names: 99082738

Gene position: 3068040-3068657 (Clockwise)

Preceding gene: 99082736

Following gene: 99082739

Centisome position: 95.85

GC content: 58.41

Gene sequence:

>618_bases
ATGACACGTAAAATCCCATTTTTAACGTCGCGCCGGCAGTTTCTTGCCGGGTCCGCATCGCTTCTGGCCTCTCCTGCGCT
TGGCCAGTCGCTTCCTGATGTAGAAGAGCCGGCATTTGATCCGCTGCGCCCCCCGCCGGAGCCGGAACCCAATGTGAAGC
GGAATATTTCCTCTTTCCGCGCCAAAAGCTGGAAACCCTATTTTGACAACCTGCGTCGCGGAGCGATCCTTGTGGATATC
GACAGCCGTGCACTGCATTTCTGGTCCGAGGATCAGAGCGTTTACAAGCTTTTCCCCTCTTCGGTACCGCTCAGCGATGA
TCTGACCCGCCGTGGCCGCACACGCGTCGTGCGCAAGGTCGAAGGGCCAAGCTGGGCGCCGACCCCCAACATGCGCAAGC
GCAACCCCGAATGGCCCGCCTACATTCCCCCGGGGCCGGACAATCCGCTTGGATCACACGCGCTCTACCTCAGTTGGCAG
TACTACCGAATCCACGGCACCCACGACACGCGCAAGATCGGGCGAAAGTCTTCGAACGGCTGCATCGGTCTCTACAATGA
GCATATCGCAGAGCTTTATAAACTTACCCGTTCGGGCACGCAGGTGTTGCTAATTTGA

Upstream 100 bases:

>100_bases
GGGTCACATTCGCGAGATTTCGGGGGATTGAATTGCGACTGCGGCATTCCAGCCATAGACTGCTCAGATCCAGAGCCCCT
CAGCCAGAGAGTACCTTCTG

Downstream 100 bases:

>100_bases
CGACAACAAGCGCAAGCTGGAACAGTGAGAATTAACAAGCAATTGCAATCCGGTTGGAAACCCGCTTAGTAAAACTTACG
AGGTAAGTCTTGAGTGCGCA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRPPPEPEPNVKRNISSFRAKSWKPYFDNLRRGAILVDI
DSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQ
YYRIHGTHDTRKIGRKSSNGCIGLYNEHIAELYKLTRSGTQVLLI

Sequences:

>Translated_205_residues
MTRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRPPPEPEPNVKRNISSFRAKSWKPYFDNLRRGAILVDI
DSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQ
YYRIHGTHDTRKIGRKSSNGCIGLYNEHIAELYKLTRSGTQVLLI
>Mature_204_residues
TRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRPPPEPEPNVKRNISSFRAKSWKPYFDNLRRGAILVDID
SRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKVEGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQY
YRIHGTHDTRKIGRKSSNGCIGLYNEHIAELYKLTRSGTQVLLI

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=142, Percent_Identity=38.7323943661972, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787040, Length=142, Percent_Identity=34.5070422535211, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787968, Length=139, Percent_Identity=33.0935251798561, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787356, Length=141, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311
- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 23334; Mature: 23203

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRPPPEPEPNVKRNISSFR
CCCCCCCHHCCHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AKSWKPYFDNLRRGAILVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKV
HCCCCCHHHHHCCCEEEEEECCCEEEEECCCCCEEHCCCCCCCCCHHHHHHHHHHHHHCC
EGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQYYRIHGTHDTRKIGRKSSNG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCCCCC
CIGLYNEHIAELYKLTRSGTQVLLI
EEEEHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
TRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRPPPEPEPNVKRNISSFR
CCCCCCHHCCHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AKSWKPYFDNLRRGAILVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTRVVRKV
HCCCCCHHHHHCCCEEEEEECCCEEEEECCCCCEEHCCCCCCCCCHHHHHHHHHHHHHCC
EGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQYYRIHGTHDTRKIGRKSSNG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCCCCC
CIGLYNEHIAELYKLTRSGTQVLLI
EEEEHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6209404 [H]