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The map label for this gene is yfdR [C]

Identifier: 99082676

GI number: 99082676

Start: 3004294

End: 3004902

Strand: Direct

Name: yfdR [C]

Synonym: TM1040_2836

Alternate gene names: 99082676

Gene position: 3004294-3004902 (Clockwise)

Preceding gene: 99082673

Following gene: 99082680

Centisome position: 93.86

GC content: 57.47

Gene sequence:

>609_bases
ATGGACCAGATCATGCCTGCAAAATCCCCCCGCGCCTGGCAACGTATGCTTTCCGGGCGACGTCTTGATTTGCTGGATCC
CACGCCAGTCGACATAGAAATCGAGGACATTGCGCATGGGCTGGCCTTTGTGGCGCGCTGGAACGGACAGACGCGAGGCG
ATTTTGCCTATTCGGTGGCAGAGCACTCGCTGCTTGTTGAGGAACTGCACGGTCGCATGTTTCCCAAAGCCCCGATCAAG
TGGAAACTCGCAGCCCTCCTGCATGACGCGCCAGAGTATGTGATCGGCGATATGATCTCCCCTGTCAAAGCCGCTGTTGG
CCCGGGCTACGGGGAGCTTGATGACCGCCTGACTTCCGCGATCCACATCCGCTTTGGCCTGCCCGCTTCGCTTCCCAAGA
CTGTGAAAGCGCAAATCAAACGCGCGGACAAAGTCTCAGCATGGATGGAAGCAGTTCAGATCGCGGGGTTTTCCGAAGCC
GAGGCGACAAAGTTCTTTGGCAGACCCAATCCAGACTTGATCGAAGGGCTTGATATCCATTTGCGCCCGCCTGTGGAGGT
GCGCCGGGATTTTGTCAGTCGCCACGAAGCCTTGCTGAAGCTGTTGTAA

Upstream 100 bases:

>100_bases
CATCCGGGGCTAGCGAGCTGCATCAGGACCTACCTCTACCTTGGACTGCAGGTTTGCAACCACACGGCAGGAAGAGTAGC
TAGAGCCCAGCAAGACAAAC

Downstream 100 bases:

>100_bases
AGTTAGCCGTCGTTTTGCGCAGCGGCGCGAGCCTGCCTGCGGGCGTGTCTTGCTGCGCGACGGGCGCGACGCTCCGCCCG
TTCCTTTTCCTCGCGCGCCT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTRGDFAYSVAEHSLLVEELHGRMFPKAPIK
WKLAALLHDAPEYVIGDMISPVKAAVGPGYGELDDRLTSAIHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEA
EATKFFGRPNPDLIEGLDIHLRPPVEVRRDFVSRHEALLKLL

Sequences:

>Translated_202_residues
MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTRGDFAYSVAEHSLLVEELHGRMFPKAPIK
WKLAALLHDAPEYVIGDMISPVKAAVGPGYGELDDRLTSAIHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEA
EATKFFGRPNPDLIEGLDIHLRPPVEVRRDFVSRHEALLKLL
>Mature_202_residues
MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTRGDFAYSVAEHSLLVEELHGRMFPKAPIK
WKLAALLHDAPEYVIGDMISPVKAAVGPGYGELDDRLTSAIHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEA
EATKFFGRPNPDLIEGLDIHLRPPVEVRRDFVSRHEALLKLL

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22547; Mature: 22547

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTRGDFAYSVA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHH
EHSLLVEELHGRMFPKAPIKWKLAALLHDAPEYVIGDMISPVKAAVGPGYGELDDRLTSA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEAEATKFFGRPNPDLIEGLDIH
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCEE
LRPPVEVRRDFVSRHEALLKLL
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTRGDFAYSVA
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHH
EHSLLVEELHGRMFPKAPIKWKLAALLHDAPEYVIGDMISPVKAAVGPGYGELDDRLTSA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEAEATKFFGRPNPDLIEGLDIH
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCEE
LRPPVEVRRDFVSRHEALLKLL
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]