| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ade
Identifier: 99082639
GI number: 99082639
Start: 2960323
End: 2962128
Strand: Direct
Name: ade
Synonym: TM1040_2799
Alternate gene names: 99082639
Gene position: 2960323-2962128 (Clockwise)
Preceding gene: 99082637
Following gene: 99082640
Centisome position: 92.48
GC content: 60.02
Gene sequence:
>1806_bases ATGACACATAAGACCTTCCCAAGCTGGCCCGACGTCGCCCCCCAACTGATCGAAACTGCTGCCGGACGCAGCCCCGCCGA TACCGTGATCCGTAACGGTAAATGGGTGAACGTGCACACGCGCGAGGTTCTTGAGGGACATGACATCGCGATCAAGGCAG GCAGGATCGCCTATGTCGGACCGGATGCCTCCTATTGCACGGGGCCAGAGACCGAGGTGATCGACGCTGAGGGGCGCTAC ATGATGCCTGGGCTCTGCGATGGACATATGCACATCGAATCCGGGATGCTGACCCCCGCAGAATTCGCCCGCGCCGTTAT CCCGCATGGCACAACGACCATGTTCACTGACCCGCATGAGATCGCAAATGTCCTGGGACTTGAGGGCGTGCGCTTGATGC ATGACGAGGCGCTGTTGCAGCCGGTCAATATCTACACGCAGATGCCGTCCTGCGCCCCCTCTGCGCCGGGGCTGGAGACC ACCGGCTATGAGATCTCCGCCGAGGATGTCGCTGAGGCCATGACCTGGCCGGGGATCATCGGCCTCGGTGAAATGATGAA TTTTCCGGGTGTCGCTCATGGTGATCCAAAGATGCTAGCGGAAATCGCCGCAACCCAGCGCTCCGGCAAAACTGTAGGCG GCCACTATGCCTCGCCAGATCTTGGACCGGATTTTGCAGCCTATGTGGCAGGCGGCCCCGCAGATGACCACGAAGGCACC TGTGAGGCGGACGCCATCACACGGATGCGACAGGGCATGCGGGCAATGGTGCGCCTCGGATCCGCCTGGTATGACGTCGA GGCCCAGATCACAGCGATCACCGAGAAGGGCCTTGATCCGCGCAATTTCATCCTTTGCACCGATGACTGCCACTCCGGAA CGTTGGTCAATGAGGGTCATATGAACCGCGCAGTGCGTCACGCAATCGACTGCGGCTGCGATCCGCTGATCGCGATCCAG ATGGCGACGATCAACACCGCAACACACTTTGGGCTCGAGCGCGAAATTGGCTCCATCACCCCCGGTCGACGGGCCGATAT CATCCTGACATCTGACCTGAAAACGCTGCCCATCGAAGTGGTGATCGCGCGTGGGCAGATTGTGGCTGAATCAGGCTCTA TTAAGGTGGAATGCCCCCATCTTGATTGGCCAGAAAGCGCTCGCGGTACGGTGCACCTGGGCCACACGCTCGCTGCGACG GACTTTGAACTGGCAGCACCAGAAGGGGCAAATGCCGTCACCGCAAATGTGATTGGCGTGGTGGAGAACCAAGCCCCGAC CAAAGCGCTCAAAGCGGAGCTGCCGGTGCGCGATGGTCTGGTTGAGGGTGAAGGCGATGTCTGCCAGATCGCCCTGGTTG AGCGTCACCGGGCCACAGGCGGCGTGACCAACGCCTTCGTGTCGGGTTTCGGCTACGAAGGGAAAATGGCGATGGCCTCG ACCGTGGCGCATGACAGCCATCACATGATTGTGGTCGGCACTGACCGCACCCAAATGGCCCTTGCCGCCAACCGTCTGGC CGAGGTCGGCGGTGGCATCACGATTTTCCGGGATGGCGCAGAGCTGGCGTTGGTGGAGCTGCCTATTGCCGGTCTGATGT CTGACAGCCCTGCCTCAGAGGTCGCCGCCAATGCACAGAAACTCGTGGAGGCCATGCAGGCCTGCGGCTGCACTCTGAAC AATGCCTATATGCAACACTCTCTCTTGGCACTTGTGGTGATCCCGGAACTGCGGATCAGCGATCTTGGCCTTGTAGACGT GCGTAGTTTCAAGAAAATTCCAGTAATCGAGCCGTTCAATGAATGA
Upstream 100 bases:
>100_bases TGACGATATCCAAGGGCGTGCTCCGGCATGAGGTCATGAGGCTGTTATGAACTCGGATTACGGGTCTTGCACCCATCTGC GCAATCAATAACAGTAGGCC
Downstream 100 bases:
>100_bases TGTAAAAACACCCGACCTGCCCGCTGCCGAAAGCTTTACCGACGCCAAAGCGGCCGTAGCGCGCCTGATTGAGCTCTACG ATAGCGCAACCAATTTTCTC
Product: adenine deaminase
Products: NA
Alternate protein names: Adenase; Adenine aminase
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MTHKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVLEGHDIAIKAGRIAYVGPDASYCTGPETEVIDAEGRY MMPGLCDGHMHIESGMLTPAEFARAVIPHGTTTMFTDPHEIANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLET TGYEISAEDVAEAMTWPGIIGLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYASPDLGPDFAAYVAGGPADDHEGT CEADAITRMRQGMRAMVRLGSAWYDVEAQITAITEKGLDPRNFILCTDDCHSGTLVNEGHMNRAVRHAIDCGCDPLIAIQ MATINTATHFGLEREIGSITPGRRADIILTSDLKTLPIEVVIARGQIVAESGSIKVECPHLDWPESARGTVHLGHTLAAT DFELAAPEGANAVTANVIGVVENQAPTKALKAELPVRDGLVEGEGDVCQIALVERHRATGGVTNAFVSGFGYEGKMAMAS TVAHDSHHMIVVGTDRTQMALAANRLAEVGGGITIFRDGAELALVELPIAGLMSDSPASEVAANAQKLVEAMQACGCTLN NAYMQHSLLALVVIPELRISDLGLVDVRSFKKIPVIEPFNE
Sequences:
>Translated_601_residues MTHKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVLEGHDIAIKAGRIAYVGPDASYCTGPETEVIDAEGRY MMPGLCDGHMHIESGMLTPAEFARAVIPHGTTTMFTDPHEIANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLET TGYEISAEDVAEAMTWPGIIGLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYASPDLGPDFAAYVAGGPADDHEGT CEADAITRMRQGMRAMVRLGSAWYDVEAQITAITEKGLDPRNFILCTDDCHSGTLVNEGHMNRAVRHAIDCGCDPLIAIQ MATINTATHFGLEREIGSITPGRRADIILTSDLKTLPIEVVIARGQIVAESGSIKVECPHLDWPESARGTVHLGHTLAAT DFELAAPEGANAVTANVIGVVENQAPTKALKAELPVRDGLVEGEGDVCQIALVERHRATGGVTNAFVSGFGYEGKMAMAS TVAHDSHHMIVVGTDRTQMALAANRLAEVGGGITIFRDGAELALVELPIAGLMSDSPASEVAANAQKLVEAMQACGCTLN NAYMQHSLLALVVIPELRISDLGLVDVRSFKKIPVIEPFNE >Mature_600_residues THKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVLEGHDIAIKAGRIAYVGPDASYCTGPETEVIDAEGRYM MPGLCDGHMHIESGMLTPAEFARAVIPHGTTTMFTDPHEIANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLETT GYEISAEDVAEAMTWPGIIGLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYASPDLGPDFAAYVAGGPADDHEGTC EADAITRMRQGMRAMVRLGSAWYDVEAQITAITEKGLDPRNFILCTDDCHSGTLVNEGHMNRAVRHAIDCGCDPLIAIQM ATINTATHFGLEREIGSITPGRRADIILTSDLKTLPIEVVIARGQIVAESGSIKVECPHLDWPESARGTVHLGHTLAATD FELAAPEGANAVTANVIGVVENQAPTKALKAELPVRDGLVEGEGDVCQIALVERHRATGGVTNAFVSGFGYEGKMAMAST VAHDSHHMIVVGTDRTQMALAANRLAEVGGGITIFRDGAELALVELPIAGLMSDSPASEVAANAQKLVEAMQACGCTLNN AYMQHSLLALVVIPELRISDLGLVDVRSFKKIPVIEPFNE
Specific function: Unknown
COG id: COG1001
COG function: function code F; Adenine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenine deaminase family
Homologues:
Organism=Escherichia coli, GI1790098, Length=578, Percent_Identity=32.6989619377163, Blast_Score=271, Evalue=9e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADEC_SILST (Q1GCT5)
Other databases:
- EMBL: CP000377 - RefSeq: YP_614793.1 - ProteinModelPortal: Q1GCT5 - STRING: Q1GCT5 - GeneID: 4076567 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_2799 - NMPDR: fig|292414.1.peg.1703 - eggNOG: COG1001 - HOGENOM: HBG725357 - OMA: VGLGEMM - PhylomeDB: Q1GCT5 - ProtClustDB: CLSK862922 - BioCyc: SSP292414:TM1040_2799-MONOMER - HAMAP: MF_01518 - InterPro: IPR006679 - InterPro: IPR006680 - InterPro: IPR011059 - TIGRFAMs: TIGR01178
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.2
Molecular weight: Translated: 63890; Mature: 63758
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVLEGHDIAIKAGRIAYVG CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHCCCCEEEECCEEEEEC PDASYCTGPETEVIDAEGRYMMPGLCDGHMHIESGMLTPAEFARAVIPHGTTTMFTDPHE CCCCCCCCCCCEEEECCCCEECCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECHHH IANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLETTGYEISAEDVAEAMTWPGII HHHHHCCCCEEEECHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCE GLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYASPDLGPDFAAYVAGGPADDHEGT EHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCC CEADAITRMRQGMRAMVRLGSAWYDVEAQITAITEKGLDPRNFILCTDDCHSGTLVNEGH CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEECCCH MNRAVRHAIDCGCDPLIAIQMATINTATHFGLEREIGSITPGRRADIILTSDLKTLPIEV HHHHHHHHHHCCCCCEEEEEEEEECHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCEEE VIARGQIVAESGSIKVECPHLDWPESARGTVHLGHTLAATDFELAAPEGANAVTANVIGV EEECCEEEEECCCEEEECCCCCCCCCCCCEEEECCEEEECCCEEECCCCCCEEEEEEEEE VENQAPTKALKAELPVRDGLVEGEGDVCQIALVERHRATGGVTNAFVSGFGYEGKMAMAS ECCCCCHHHHHHCCCHHCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHCCCCCCCCHHHH TVAHDSHHMIVVGTDRTQMALAANRLAEVGGGITIFRDGAELALVELPIAGLMSDSPASE HHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHHCCCCCHHH VAANAQKLVEAMQACGCTLNNAYMQHSLLALVVIPELRISDLGLVDVRSFKKIPVIEPFN HHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEECCCCCCCCCEEEHHCCCCCCCCCCCC E C >Mature Secondary Structure THKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVLEGHDIAIKAGRIAYVG CCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHCCCCEEEECCEEEEEC PDASYCTGPETEVIDAEGRYMMPGLCDGHMHIESGMLTPAEFARAVIPHGTTTMFTDPHE CCCCCCCCCCCEEEECCCCEECCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECHHH IANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLETTGYEISAEDVAEAMTWPGII HHHHHCCCCEEEECHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCE GLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYASPDLGPDFAAYVAGGPADDHEGT EHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCC CEADAITRMRQGMRAMVRLGSAWYDVEAQITAITEKGLDPRNFILCTDDCHSGTLVNEGH CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEECCCH MNRAVRHAIDCGCDPLIAIQMATINTATHFGLEREIGSITPGRRADIILTSDLKTLPIEV HHHHHHHHHHCCCCCEEEEEEEEECHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCEEE VIARGQIVAESGSIKVECPHLDWPESARGTVHLGHTLAATDFELAAPEGANAVTANVIGV EEECCEEEEECCCEEEECCCCCCCCCCCCEEEECCEEEECCCEEECCCCCCEEEEEEEEE VENQAPTKALKAELPVRDGLVEGEGDVCQIALVERHRATGGVTNAFVSGFGYEGKMAMAS ECCCCCHHHHHHCCCHHCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHCCCCCCCCHHHH TVAHDSHHMIVVGTDRTQMALAANRLAEVGGGITIFRDGAELALVELPIAGLMSDSPASE HHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHHCCCCCHHH VAANAQKLVEAMQACGCTLNNAYMQHSLLALVVIPELRISDLGLVDVRSFKKIPVIEPFN HHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEECCCCCCCCCEEEHHCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA