Click here to switch to the map view.

The map label for this gene is 99082560

Identifier: 99082560

GI number: 99082560

Start: 2864282

End: 2864500

Strand: Direct

Name: 99082560

Synonym: TM1040_2720

Alternate gene names: NA

Gene position: 2864282-2864500 (Clockwise)

Preceding gene: 99082559

Following gene: 99082561

Centisome position: 89.48

GC content: 57.99

Gene sequence:

>219_bases
TTGTCTCCCCGAAGCCCACAGAGGGTGGGCACTAAAACACGGCAAAGGAGACACCCGATGCTTAGTTGGGCACTGGCATT
TCTCGTGATCGCGCTGATTGCAGCCGTCTTTGGCTTTGGCGGCATCGCCAGCGCCTCGGCTGGGATCGCGCAGATCCTGT
TTTTCATCTTCCTCGTGATGTTTGTCGTCGCGCTGATATTGCGCGCGGTGCGTGGCTAA

Upstream 100 bases:

>100_bases
CTTGAATTAAGGCCCTGAAGAACCTTATATTTTCACACAGGGCGCATGCCGTTCCTGGTGCGGGCCTGAAATTCCGGGGA
ACAAAACCCGTCTCCCGCCG

Downstream 100 bases:

>100_bases
CAGCCACAGTCACAGCAACCACATCACACAACCTCCCTTTGGAAAGGAGATACCATGTCAAACGCATTGAATGTTAAACC
GCAGTTGGCCCCCGTCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSPRSPQRVGTKTRQRRHPMLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVMFVVALILRAVRG

Sequences:

>Translated_72_residues
MSPRSPQRVGTKTRQRRHPMLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVMFVVALILRAVRG
>Mature_71_residues
SPRSPQRVGTKTRQRRHPMLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVMFVVALILRAVRG

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 7816; Mature: 7684

Theoretical pI: Translated: 13.28; Mature: 13.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRSPQRVGTKTRQRRHPMLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FVVALILRAVRG
HHHHHHHHHHCC
>Mature Secondary Structure 
SPRSPQRVGTKTRQRRHPMLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FVVALILRAVRG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA