BacMap

Definition	Ruegeria sp. TM1040, complete genome.
Accession	NC_008044
Length	3,200,938

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The map label for this gene is gabD [H]

Identifier: 99082532

GI number: 99082532

Start: 2833528

End: 2835003

Strand: Reverse

Name: gabD [H]

Synonym: TM1040_2692

Alternate gene names: 99082532

Gene position: 2835003-2833528 (Counterclockwise)

Preceding gene: 99082533

Following gene: 99082531

Centisome position: 88.57

GC content: 61.92

Gene sequence:

>1476_bases
ATGTCGTTATCGGCCCTGTCCGCGCGTGCGGAGATCAGTGACAAAGCACTCGTGCGTTCGTTTTCTTACATCAACGGGAA
ATGGTGTGCCTCGTCCAATGGCGAGGTGGTCGCAGTACATGACCCGGCCACGGGCGACTTCATCGGCGATGTCACGGCCA
TGACAGCAGAGGATTCCTCTGCCGCGGTGGATGCGGCACATGCGGCCTTTACCAGCTGGGCATTGATGCTGCCGCAGGAT
CGCTGCGCCCTATTGCGTCGCTGGTTCGAACTGATGATCGAGCATAAAGAGGACCTCGCCCGCCTTATGGTGCTGGAGCA
GGGCAAACCCTTGTCGGAGGCCCGCGGCGAGATCGACTATGGCGCGGCCTTTGTCGAATTCTATGCCGAGGAATCCAAAC
GGCCCAACATCGAGGGCGTCACCAGCCATCTGCCCGATGCGGAGGTGGAACTCTGGCGCGAACCTGTGGGCGTGGCCGCA
TTGATCACGCCGTGGAATTTTCCCTCTGCGATGCTGACTCGCAAGGCCGCAGCCGCGCTGGCGGCGGGCTGCACCGTTGT
CGCCCACCCCTCCGCCGAAACGCCCTTCAGCGCGCTGGCGCTGGCCGAGCTGGCAGAACGCGCGGGCATTCCCAAAGGCG
TCTTCAATGTCATCACAGGCAAGGCCCCGGTGGTGGTTGAGCCATGGACACGGGATGCGCGCGTGCGGGCCCTGTCCTTC
ACCGGCTCCACCGAGGTCGGCAAGCTCCTCTATCGTCAGTCCGCCGAGACGGTCAAACGTCTGGTGATGGAACTCGGTGG
TCATGCTCCGGTGATCGTTTTCAAAAACTGCGATCTCGATCGTGCCGTCGCCGAAACGATCAAGGCGAAATTCGCCACCT
CCGGGCAGGATTGCCTTGGCGCCAACCGCATCTTTGTCGAGCGGGACATTTATGATGAGTTCTGCACCCGATTTGTGGCG
GCGACGCAGGCGCTCAGCGTGGGCAAGGGGATTGATGATCCCGATATCGGCCCGCTGATGAACGAAAAAGCGGTGCAGAA
ACAGGAAGAGCATGTCGCTGACGCATTGGAAAAAGGCGCCACATTGGCCTGCGGCGGCAAACGCCACGCGCTGGGGCCGC
TGTTTTATGAACCCACCGTGCTGACGGATGTCCCCGCTGACGCGCTGATCCTGCACGAAGAGACCTTCGGCCCGGTCGCG
CCGATCACGCCGTTTGACTCTGAGGACGAGGTGATCCAGCGTGCCAATGACAGCGAATATGGGCTTGTCGCCTATGTCCA
CAGCCATGATCCGCGCCGGATCTATCGCCTGAGCCGCGCCTTGCAGTTCGGCATGGTGGCGGTCAACCGAACCAAAGTCA
CCGGCGCGCCGATCCCCTTTGGCGGCACCAAACAATCCGGCATGGGCCGCGAGGGCGCACGGCTGGGCATGGAAGAATTC
ACCGAGGTCAAATACGTCTGCCGCGACTGGGCGTAA

Upstream 100 bases:

>100_bases
TGCTCCGGGGCAGTTGAATCCTCTGCCGAGTCGGCAAACTTTGGTCACTTCTTCTGATCGCGCCATGCAGACTGCCCCCA
AGTCTAAAGGAGGAGCAGAC

Downstream 100 bases:

>100_bases
CCCTTGAATGATACGAGATTTGCCGCCCTCGCGGGTGGAACACGGAAATAGGAAGGACCGAAAATGCTGAAGAACGATCA
ACTGGACCAATGGGACCGCG

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPATGDFIGDVTAMTAEDSSAAVDAAHAAFTSWALMLPQD
RCALLRRWFELMIEHKEDLARLMVLEQGKPLSEARGEIDYGAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAA
LITPWNFPSAMLTRKAAAALAAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVITGKAPVVVEPWTRDARVRALSF
TGSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKNCDLDRAVAETIKAKFATSGQDCLGANRIFVERDIYDEFCTRFVA
ATQALSVGKGIDDPDIGPLMNEKAVQKQEEHVADALEKGATLACGGKRHALGPLFYEPTVLTDVPADALILHEETFGPVA
PITPFDSEDEVIQRANDSEYGLVAYVHSHDPRRIYRLSRALQFGMVAVNRTKVTGAPIPFGGTKQSGMGREGARLGMEEF
TEVKYVCRDWA

Sequences:

>Translated_491_residues
MSLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPATGDFIGDVTAMTAEDSSAAVDAAHAAFTSWALMLPQD
RCALLRRWFELMIEHKEDLARLMVLEQGKPLSEARGEIDYGAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAA
LITPWNFPSAMLTRKAAAALAAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVITGKAPVVVEPWTRDARVRALSF
TGSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKNCDLDRAVAETIKAKFATSGQDCLGANRIFVERDIYDEFCTRFVA
ATQALSVGKGIDDPDIGPLMNEKAVQKQEEHVADALEKGATLACGGKRHALGPLFYEPTVLTDVPADALILHEETFGPVA
PITPFDSEDEVIQRANDSEYGLVAYVHSHDPRRIYRLSRALQFGMVAVNRTKVTGAPIPFGGTKQSGMGREGARLGMEEF
TEVKYVCRDWA
>Mature_490_residues
SLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPATGDFIGDVTAMTAEDSSAAVDAAHAAFTSWALMLPQDR
CALLRRWFELMIEHKEDLARLMVLEQGKPLSEARGEIDYGAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAAL
ITPWNFPSAMLTRKAAAALAAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVITGKAPVVVEPWTRDARVRALSFT
GSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKNCDLDRAVAETIKAKFATSGQDCLGANRIFVERDIYDEFCTRFVAA
TQALSVGKGIDDPDIGPLMNEKAVQKQEEHVADALEKGATLACGGKRHALGPLFYEPTVLTDVPADALILHEETFGPVAP
ITPFDSEDEVIQRANDSEYGLVAYVHSHDPRRIYRLSRALQFGMVAVNRTKVTGAPIPFGGTKQSGMGREGARLGMEEFT
EVKYVCRDWA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=479, Percent_Identity=49.0605427974948, Blast_Score=433, Evalue=1e-121,
Organism=Homo sapiens, GI25777721, Length=492, Percent_Identity=47.5609756097561, Blast_Score=423, Evalue=1e-118,
Organism=Homo sapiens, GI12007648, Length=484, Percent_Identity=38.4297520661157, Blast_Score=305, Evalue=5e-83,
Organism=Homo sapiens, GI25777724, Length=470, Percent_Identity=38.0851063829787, Blast_Score=292, Evalue=6e-79,
Organism=Homo sapiens, GI115387104, Length=455, Percent_Identity=36.4835164835165, Blast_Score=285, Evalue=5e-77,
Organism=Homo sapiens, GI21614513, Length=479, Percent_Identity=37.7870563674322, Blast_Score=284, Evalue=1e-76,
Organism=Homo sapiens, GI238814322, Length=480, Percent_Identity=35, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI153266822, Length=472, Percent_Identity=37.5, Blast_Score=275, Evalue=6e-74,
Organism=Homo sapiens, GI25777730, Length=471, Percent_Identity=36.7303609341826, Blast_Score=275, Evalue=9e-74,
Organism=Homo sapiens, GI25777732, Length=471, Percent_Identity=37.3673036093418, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI21361176, Length=482, Percent_Identity=36.5145228215768, Blast_Score=266, Evalue=2e-71,
Organism=Homo sapiens, GI25777728, Length=414, Percent_Identity=38.4057971014493, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI25777726, Length=470, Percent_Identity=35.3191489361702, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI25952152, Length=474, Percent_Identity=34.1772151898734, Blast_Score=245, Evalue=7e-65,
Organism=Homo sapiens, GI301500698, Length=486, Percent_Identity=32.7160493827161, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI188035924, Length=458, Percent_Identity=31.4410480349345, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI310128103, Length=458, Percent_Identity=31.4410480349345, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI310128093, Length=458, Percent_Identity=31.2227074235808, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI11095441, Length=483, Percent_Identity=26.0869565217391, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI310128091, Length=458, Percent_Identity=30.5676855895196, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI206597441, Length=428, Percent_Identity=28.9719626168224, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI206597439, Length=428, Percent_Identity=28.9719626168224, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI22907049, Length=428, Percent_Identity=28.9719626168224, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI223972651, Length=460, Percent_Identity=28.695652173913, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI4557303, Length=368, Percent_Identity=27.7173913043478, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI73466520, Length=368, Percent_Identity=27.7173913043478, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI310128089, Length=334, Percent_Identity=32.0359281437126, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI310128097, Length=247, Percent_Identity=36.8421052631579, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI73695881, Length=336, Percent_Identity=27.9761904761905, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI73695879, Length=336, Percent_Identity=27.9761904761905, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI4502043, Length=332, Percent_Identity=28.9156626506024, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI238814371, Length=332, Percent_Identity=28.9156626506024, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI310128095, Length=277, Percent_Identity=33.2129963898917, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI71773324, Length=332, Percent_Identity=28.9156626506024, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI238859541, Length=434, Percent_Identity=27.1889400921659, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI25777736, Length=434, Percent_Identity=27.1889400921659, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI25777734, Length=434, Percent_Identity=27.1889400921659, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI310128087, Length=289, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI223972653, Length=248, Percent_Identity=31.0483870967742, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI310128099, Length=229, Percent_Identity=28.82096069869, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI310128101, Length=229, Percent_Identity=28.82096069869, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1789015, Length=478, Percent_Identity=50.6276150627615, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1787684, Length=466, Percent_Identity=33.9055793991416, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI87081896, Length=474, Percent_Identity=35.8649789029536, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1787558, Length=482, Percent_Identity=36.0995850622407, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787715, Length=466, Percent_Identity=36.6952789699571, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1786504, Length=474, Percent_Identity=36.0759493670886, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI87082295, Length=482, Percent_Identity=31.9502074688797, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=30.8888888888889, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1788042, Length=470, Percent_Identity=32.1276595744681, Blast_Score=185, Evalue=7e-48,
Organism=Escherichia coli, GI1787250, Length=455, Percent_Identity=30.5494505494506, Blast_Score=168, Evalue=8e-43,
Organism=Escherichia coli, GI1787653, Length=445, Percent_Identity=22.4719101123595, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17534119, Length=473, Percent_Identity=46.9344608879493, Blast_Score=394, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI133930964, Length=481, Percent_Identity=35.7588357588358, Blast_Score=288, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17562198, Length=474, Percent_Identity=36.0759493670886, Blast_Score=266, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI25144435, Length=475, Percent_Identity=35.7894736842105, Blast_Score=265, Evalue=5e-71,
Organism=Caenorhabditis elegans, GI25143874, Length=462, Percent_Identity=34.4155844155844, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI25143876, Length=462, Percent_Identity=34.4155844155844, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI32564736, Length=419, Percent_Identity=36.9928400954654, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI71995606, Length=475, Percent_Identity=34.9473684210526, Blast_Score=241, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI17551164, Length=459, Percent_Identity=32.6797385620915, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=417, Percent_Identity=34.7721822541966, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI115534176, Length=459, Percent_Identity=30.2832244008715, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI71986308, Length=482, Percent_Identity=26.3485477178423, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17564084, Length=436, Percent_Identity=26.8348623853211, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI32566756, Length=385, Percent_Identity=29.6103896103896, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25146391, Length=386, Percent_Identity=29.5336787564767, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=386, Percent_Identity=29.5336787564767, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=442, Percent_Identity=26.6968325791855, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32564151, Length=408, Percent_Identity=26.2254901960784, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115532534, Length=385, Percent_Identity=27.2727272727273, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=292, Percent_Identity=25, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6319478, Length=490, Percent_Identity=44.2857142857143, Blast_Score=419, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6320917, Length=469, Percent_Identity=35.3944562899787, Blast_Score=286, Evalue=7e-78,
Organism=Saccharomyces cerevisiae, GI6324950, Length=470, Percent_Identity=34.8936170212766, Blast_Score=283, Evalue=4e-77,
Organism=Saccharomyces cerevisiae, GI6323821, Length=486, Percent_Identity=32.9218106995885, Blast_Score=263, Evalue=4e-71,
Organism=Saccharomyces cerevisiae, GI6325196, Length=470, Percent_Identity=33.1914893617021, Blast_Score=259, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6323822, Length=484, Percent_Identity=32.0247933884297, Blast_Score=254, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6321828, Length=482, Percent_Identity=26.1410788381743, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6321826, Length=481, Percent_Identity=27.2349272349272, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6323757, Length=335, Percent_Identity=26.865671641791, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281362580, Length=478, Percent_Identity=46.234309623431, Blast_Score=444, Evalue=1e-125,
Organism=Drosophila melanogaster, GI62472918, Length=478, Percent_Identity=46.234309623431, Blast_Score=444, Evalue=1e-125,
Organism=Drosophila melanogaster, GI62472926, Length=478, Percent_Identity=46.234309623431, Blast_Score=444, Evalue=1e-125,
Organism=Drosophila melanogaster, GI62472936, Length=478, Percent_Identity=46.234309623431, Blast_Score=444, Evalue=1e-125,
Organism=Drosophila melanogaster, GI21356737, Length=478, Percent_Identity=46.234309623431, Blast_Score=444, Evalue=1e-125,
Organism=Drosophila melanogaster, GI24650465, Length=469, Percent_Identity=35.3944562899787, Blast_Score=276, Evalue=3e-74,
Organism=Drosophila melanogaster, GI20129399, Length=472, Percent_Identity=36.864406779661, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24585660, Length=478, Percent_Identity=33.8912133891213, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24666674, Length=459, Percent_Identity=28.322440087146, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24638876, Length=483, Percent_Identity=27.7432712215321, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24638878, Length=483, Percent_Identity=27.7432712215321, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI45552499, Length=346, Percent_Identity=30.9248554913295, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281360303, Length=346, Percent_Identity=30.9248554913295, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI281360299, Length=346, Percent_Identity=30.9248554913295, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI281360297, Length=346, Percent_Identity=30.9248554913295, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI281360295, Length=346, Percent_Identity=30.9248554913295, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24586250, Length=346, Percent_Identity=30.9248554913295, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI281360301, Length=346, Percent_Identity=30.9248554913295, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI24668425, Length=422, Percent_Identity=25.8293838862559, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24668417, Length=422, Percent_Identity=25.8293838862559, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24668413, Length=422, Percent_Identity=25.8293838862559, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574525, Length=439, Percent_Identity=26.4236902050114, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281360293, Length=167, Percent_Identity=29.3413173652695, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28571806, Length=427, Percent_Identity=22.4824355971897, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571802, Length=427, Percent_Identity=22.4824355971897, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571800, Length=427, Percent_Identity=22.4824355971897, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571798, Length=427, Percent_Identity=22.4824355971897, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571796, Length=427, Percent_Identity=22.4824355971897, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571794, Length=427, Percent_Identity=22.4824355971897, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 53242; Mature: 53111

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPATGDFIGDVTAMTAEDSS
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCC
AAVDAAHAAFTSWALMLPQDRCALLRRWFELMIEHKEDLARLMVLEQGKPLSEARGEIDY
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
GAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAALITPWNFPSAMLTRKAAAAL
HHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
AAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVITGKAPVVVEPWTRDARVRALSF
HHCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCCEEEEEEE
TGSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKNCDLDRAVAETIKAKFATSGQDCLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHCC
ANRIFVERDIYDEFCTRFVAATQALSVGKGIDDPDIGPLMNEKAVQKQEEHVADALEKGA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TLACGGKRHALGPLFYEPTVLTDVPADALILHEETFGPVAPITPFDSEDEVIQRANDSEY
EEEECCCCCCCCCCEECCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
GLVAYVHSHDPRRIYRLSRALQFGMVAVNRTKVTGAPIPFGGTKQSGMGREGARLGMEEF
EEEEEEECCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCHHHCCHHHH
TEVKYVCRDWA
HHHHHHHHCCC
>Mature Secondary Structure 
SLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPATGDFIGDVTAMTAEDSS
CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCC
AAVDAAHAAFTSWALMLPQDRCALLRRWFELMIEHKEDLARLMVLEQGKPLSEARGEIDY
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
GAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAALITPWNFPSAMLTRKAAAAL
HHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
AAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVITGKAPVVVEPWTRDARVRALSF
HHCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCCEEEEEEE
TGSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKNCDLDRAVAETIKAKFATSGQDCLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHCC
ANRIFVERDIYDEFCTRFVAATQALSVGKGIDDPDIGPLMNEKAVQKQEEHVADALEKGA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TLACGGKRHALGPLFYEPTVLTDVPADALILHEETFGPVAPITPFDSEDEVIQRANDSEY
EEEECCCCCCCCCCEECCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
GLVAYVHSHDPRRIYRLSRALQFGMVAVNRTKVTGAPIPFGGTKQSGMGREGARLGMEEF
EEEEEEECCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCHHHCCHHHH
TEVKYVCRDWA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]