Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082521

Identifier: 99082521

GI number: 99082521

Start: 2819297

End: 2819674

Strand: Direct

Name: 99082521

Synonym: TM1040_2681

Alternate gene names: NA

Gene position: 2819297-2819674 (Clockwise)

Preceding gene: 99082520

Following gene: 99082527

Centisome position: 88.08

GC content: 64.81

Gene sequence:

>378_bases
ATGAGTGCCATGACGCTCCAGAAGATCCGTTTTCGCTCCGGCCTCTGGGAAGGTCGGATTGAGACTGCGCCGCGTGCCGA
TGCGCGCCCACAGATTGTCGTGCGCTACCTCGATCGCGAAGTGGGAGGGGTCACCCTGGAGGCGGCCGAGGCGCCGGGAA
GCTGGGCGCTGACGATCCCGGTGCCCAGCGAGGCCATCGGCGACGGGGTGCAGAGCTTTGTGATCATCGACGCCGAGACG
GACACGAAGATCGGCGATTTCACCCTGATTGCGGGTGAGCCACTGGCGGATGATCTGCGCGCAGAGGTGGAACTGCTGCG
TGCAGAGCTCGACATGCTGAAGCGCGCCTTTCGCCGCCACTGCCTCGAAACCACCTGA

Upstream 100 bases:

>100_bases
CAGACATGAACCAGGTGGTGCTGCGGGATCTGACCTTTGCGCGTTTTCTGCGCGCCAACCTCTGACCGCGCGCTGCGCAA
TCGCCAATGGGAGAGCCCAG

Downstream 100 bases:

>100_bases
GAGCCCAGGCGCCACAGGCGTCCTCTCGTCCGGTTCTGCCGGGTACGTCCGCAGGTATGCCCTGTCGGCAGGCCCGCCAG
CCGGTGCTGCCGCTGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGVTLEAAEAPGSWALTIPVPSEAIGDGVQSFVIIDAET
DTKIGDFTLIAGEPLADDLRAEVELLRAELDMLKRAFRRHCLETT

Sequences:

>Translated_125_residues
MSAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGVTLEAAEAPGSWALTIPVPSEAIGDGVQSFVIIDAET
DTKIGDFTLIAGEPLADDLRAEVELLRAELDMLKRAFRRHCLETT
>Mature_124_residues
SAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGVTLEAAEAPGSWALTIPVPSEAIGDGVQSFVIIDAETD
TKIGDFTLIAGEPLADDLRAEVELLRAELDMLKRAFRRHCLETT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13795; Mature: 13664

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGVTLEAAEAPGSWALTIP
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEE
VPSEAIGDGVQSFVIIDAETDTKIGDFTLIAGEPLADDLRAEVELLRAELDMLKRAFRRH
CCHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CLETT
HCCCC
>Mature Secondary Structure 
SAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGVTLEAAEAPGSWALTIP
CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEE
VPSEAIGDGVQSFVIIDAETDTKIGDFTLIAGEPLADDLRAEVELLRAELDMLKRAFRRH
CCHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CLETT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA