Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082491

Identifier: 99082491

GI number: 99082491

Start: 2786322

End: 2786789

Strand: Reverse

Name: 99082491

Synonym: TM1040_2651

Alternate gene names: NA

Gene position: 2786789-2786322 (Counterclockwise)

Preceding gene: 99082495

Following gene: 99082490

Centisome position: 87.06

GC content: 64.53

Gene sequence:

>468_bases
ATGACCCGCCTTGCCTCTTCGACCCGCAACCTGCACCGCAAGTTCATCGCTGCCGTGATCGCCACGGCCCTTGTCATCAC
CGGTTTTTCCGCCGCACCTGCGCGCGCCGACAGTGACGACATCGCCAAGTTCATTGCCGGGGCTGCGATTCTCGGGATCA
TCGGTGCCGCGATCAACGACCACAAGAAGGACCGGCACCGCCCGCCGCATGTGGACCCCACGCCCGCGCCCAAGCCGCTG
CCGCCGCGTGTGCGCCGCTATGATCTTCCGGCGCAGTGTCTCACCAGCATTCGTGTCCATGGCAAGGAGCGCAACCTCCT
CGGGATGCACTGCCTGCGCCGCAACTACACGCATGTGAATACATTGCCGAACCGCTGCTACCGCGAGTTTGACAACCGCA
CCCAGAGCCGTCGCGGCTATCGTCCGGCCTGCCTGCGTCAATACGGCTACCGACTGGTGCGGCTCTAA

Upstream 100 bases:

>100_bases
CGTTATTGCCTGTCTTGCGGCGGCGGGGCGAGGGTCGGGGCATCCGGTTGATCTTCAACCACGACATGCCTTCAGACACA
GTTACACAGGATACATTGCC

Downstream 100 bases:

>100_bases
GCACCAGCGGCACATTCGAGCAGCAGACTGGGGCGCATCTGGCATGCGCCCCTTTTTTTGTGCCGCTTTTGGTGCGCCCT
CTTGCATGCGCGCGGCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKFIAGAAILGIIGAAINDHKKDRHRPPHVDPTPAPKPL
PPRVRRYDLPAQCLTSIRVHGKERNLLGMHCLRRNYTHVNTLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL

Sequences:

>Translated_155_residues
MTRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKFIAGAAILGIIGAAINDHKKDRHRPPHVDPTPAPKPL
PPRVRRYDLPAQCLTSIRVHGKERNLLGMHCLRRNYTHVNTLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL
>Mature_154_residues
TRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKFIAGAAILGIIGAAINDHKKDRHRPPHVDPTPAPKPLP
PRVRRYDLPAQCLTSIRVHGKERNLLGMHCLRRNYTHVNTLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17532; Mature: 17400

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKFIAGAAILGIIGAAIND
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HKKDRHRPPHVDPTPAPKPLPPRVRRYDLPAQCLTSIRVHGKERNLLGMHCLRRNYTHVN
HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
TLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKFIAGAAILGIIGAAIND
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HKKDRHRPPHVDPTPAPKPLPPRVRRYDLPAQCLTSIRVHGKERNLLGMHCLRRNYTHVN
HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
TLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA