| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082473
Identifier: 99082473
GI number: 99082473
Start: 2767201
End: 2767701
Strand: Direct
Name: 99082473
Synonym: TM1040_2633
Alternate gene names: NA
Gene position: 2767201-2767701 (Clockwise)
Preceding gene: 99082472
Following gene: 99082474
Centisome position: 86.45
GC content: 65.67
Gene sequence:
>501_bases ATGACCCTCCAGGTGACGCTCACTCCCGACTTGGTGCAGGCCCCTTTGGTGACCTTTGGCTTTGACCCGTTCGAGGCCCG GCTGGTGTCGATCATGCGCCACTTTGTTGCGGCCGCCAACGCGCCGGGCAGTCAGGCGTGGCACCGCGCCTTTGTCATTG CGGCAGAAAACTGGGGCGAAGCACATGGTCTGGCGGTTGCGCATACCTTGTGGCCCGTGGTGCGCGAGCTGCTTGAACTC AGAGAAGGCGATTTCACCTCCAACGACCCGCTCGATCTCGACACCCGCGACCTGCTCACCACCGATGAGGCGCAGTTTAT CGCCATGCTGCACCACATGCGCCGCGACCATACCGCCAAGGCCCGCGATGCGGTCGAGGCGCTGACCCATGGGCAGATGA ACCCCGACCTCATTCGCGCGGGCCTGTCCTTTGCTGACCGCTTCCCCTCGGGCGCGCGGCAACGCCTGCGCGGCACTCCG GCCCTGCGCGTCGTCGGCTAA
Upstream 100 bases:
>100_bases GGGAAATGGCGCCCAGCCTCTCGCCCGGTCCAGATGCAAACGCGCCCGACACATCCCGAATGTGGTTTGAGGGGGCGCAT AGGTAAAAGGCGCAGTATCA
Downstream 100 bases:
>100_bases GGGTGGAAAAACAGCAGTTTCGCTCTCCCAACAGGCGGTCTGCGCGGGAAACCATGGCAAGCGGCCTTGCACGACCGGGG CGCGGGTAGTAGGCATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGSQAWHRAFVIAAENWGEAHGLAVAHTLWPVVRELLEL REGDFTSNDPLDLDTRDLLTTDEAQFIAMLHHMRRDHTAKARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTP ALRVVG
Sequences:
>Translated_166_residues MTLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGSQAWHRAFVIAAENWGEAHGLAVAHTLWPVVRELLEL REGDFTSNDPLDLDTRDLLTTDEAQFIAMLHHMRRDHTAKARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTP ALRVVG >Mature_165_residues TLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGSQAWHRAFVIAAENWGEAHGLAVAHTLWPVVRELLELR EGDFTSNDPLDLDTRDLLTTDEAQFIAMLHHMRRDHTAKARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTPA LRVVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18398; Mature: 18267
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGSQAWHRAFVIAAENWGE CEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCC AHGLAVAHTLWPVVRELLELREGDFTSNDPLDLDTRDLLTTDEAQFIAMLHHMRRDHTAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHH ARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTPALRVVG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECC >Mature Secondary Structure TLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGSQAWHRAFVIAAENWGE EEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCC AHGLAVAHTLWPVVRELLELREGDFTSNDPLDLDTRDLLTTDEAQFIAMLHHMRRDHTAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHH ARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTPALRVVG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA