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The map label for this gene is yvcK [H]

Identifier: 99082467

GI number: 99082467

Start: 2759858

End: 2761072

Strand: Direct

Name: yvcK [H]

Synonym: TM1040_2627

Alternate gene names: 99082467

Gene position: 2759858-2761072 (Clockwise)

Preceding gene: 99082466

Following gene: 99082469

Centisome position: 86.22

GC content: 64.94

Gene sequence:

>1215_bases
ATGTCAAAGACCGCGCCCTCGCCCCCAGCCCCAGCCTCTGCCCCCGGCTCCGATCCCGGTTCTGATCCCGGCCCTGCCCA
CGTCCGGCCCCCCGGACGGGATGCAACACAAGGCCCGCGCCTGTTGTTCTTTTCCGGTGGCACGGCCCTCAACGAGATCT
CGCGCAGGCTCAAGGCCTACACGCAGAACTCGGTGCATCTGATTACACCCTTCGACAGCGGTGGCTCATCGCAGGTGCTG
CGCAAAGCCTTTGGCATGCCCGCGGTCGGCGACCTGCGCAGTCGACTTATGGCGCTGGCGGATGAAACCGATAGAGGCCA
GCCAGAGATCCTGCGCCTGTTCACCCATCGCTTTGCAAAACACGCGTCAGAGCGGAATGTGACACAGGACGCTGCCCGGC
TCTTTGAGGGCACGCATCCGCTTTTGCAGGGGATTCCAACGCCGGTACGACAGCAAATCCGCGAAGACCTGCGCCAGTTT
CAGGACGCCGCCCCGGCGGATCTGGACTATCGCAACGCCAGCATCGGCAACCTGATCCTCGCGGGGGGCTATCTGCGTCA
CGGCCGCCAGCTTGAGCCGGTGCTTGCCCAGATGTCGCGGATGGTGGCGGTGCGCGGCACCGTGCGCCCGATTGCGGATG
TGAACCTGGAGATCGGTGCAGAGCTTCGGGACGGGCGGCGCGTCATCGGTCAGCGCCGGATGACGGGCAAGGAGCACGCA
CCGCTCACCAGCCCTATCGCGCGCCTCTTTCTGTCAGATGGCACCCGCGAACTGCCTGCGGATGCGGTGCCCCTCCCGCA
AAGCAACCAAGACCTCATCGCCGGGGCGGACCTGATCTGCTACCCGCCCGGCAGTCTCTATTCGAGCGTGATCTGCAATC
TCCTGCCCAAAGGTGTGGGCCAGGCCATTGCCGCGCGCAACGTGCCAAAGGTCTATGTCCCAAGCCTCGGCACAGATCCG
GAATGTCTGGCGATGACGCTCTCGGATCAGATCTCTGCCTTACTGGCACCGCTGCGCCGGGACGCTGGTGATGTGGCCAC
CTCAGCCTTTCTCAGCCATGTGATCTGTGACCTCAGCGTGTCAGAGGCGGCACGCGCAGAGGTCCTGCGCGATCACGGCA
TCCCCTGCATCGCGCGGCCTTTGGCGGTCTCTTCGGGCAAGTCGCCCTGCTATGCGCCGGATGCCCTCTGCAGACAGCTA
CTGGCACTGGCCTGA

Upstream 100 bases:

>100_bases
GAATGATGGGCCGGAACCACAGGAGCGCCACCCGGCGCTCTTTTGTGGTGTTTTGGGCAAAGCGGTGGCATGCTCGGCCT
TCGTTTGAAGACGGGACCCC

Downstream 100 bases:

>100_bases
GCCCACAATGCGCTCGGGCCAGTCCGCGCAGGCCAATGTAGGCGGGCCAAGGCTTTCAGGCCAGAAAGTATCCGGTCAAT
TGCCAAAGATGTCCTGCAAC

Product: protein of unknown function UPF0052 and CofD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFFSGGTALNEISRRLKAYTQNSVHLITPFDSGGSSQVL
RKAFGMPAVGDLRSRLMALADETDRGQPEILRLFTHRFAKHASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQF
QDAAPADLDYRNASIGNLILAGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEIGAELRDGRRVIGQRRMTGKEHA
PLTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGADLICYPPGSLYSSVICNLLPKGVGQAIAARNVPKVYVPSLGTDP
ECLAMTLSDQISALLAPLRRDAGDVATSAFLSHVICDLSVSEAARAEVLRDHGIPCIARPLAVSSGKSPCYAPDALCRQL
LALA

Sequences:

>Translated_404_residues
MSKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFFSGGTALNEISRRLKAYTQNSVHLITPFDSGGSSQVL
RKAFGMPAVGDLRSRLMALADETDRGQPEILRLFTHRFAKHASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQF
QDAAPADLDYRNASIGNLILAGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEIGAELRDGRRVIGQRRMTGKEHA
PLTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGADLICYPPGSLYSSVICNLLPKGVGQAIAARNVPKVYVPSLGTDP
ECLAMTLSDQISALLAPLRRDAGDVATSAFLSHVICDLSVSEAARAEVLRDHGIPCIARPLAVSSGKSPCYAPDALCRQL
LALA
>Mature_403_residues
SKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFFSGGTALNEISRRLKAYTQNSVHLITPFDSGGSSQVLR
KAFGMPAVGDLRSRLMALADETDRGQPEILRLFTHRFAKHASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQFQ
DAAPADLDYRNASIGNLILAGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEIGAELRDGRRVIGQRRMTGKEHAP
LTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGADLICYPPGSLYSSVICNLLPKGVGQAIAARNVPKVYVPSLGTDPE
CLAMTLSDQISALLAPLRRDAGDVATSAFLSHVICDLSVSEAARAEVLRDHGIPCIARPLAVSSGKSPCYAPDALCRQLL
ALA

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324317, Length=207, Percent_Identity=27.0531400966184, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 43145; Mature: 43014

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFFSGGTALNEISRRLKAY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
TQNSVHLITPFDSGGSSQVLRKAFGMPAVGDLRSRLMALADETDRGQPEILRLFTHRFAK
HCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
HASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQFQDAAPADLDYRNASIGNLIL
HHHHCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
AGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEIGAELRDGRRVIGQRRMTGKEHA
ECHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHCCCCCCC
PLTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGADLICYPPGSLYSSVICNLLPKGVG
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHH
QAIAARNVPKVYVPSLGTDPECLAMTLSDQISALLAPLRRDAGDVATSAFLSHVICDLSV
HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SEAARAEVLRDHGIPCIARPLAVSSGKSPCYAPDALCRQLLALA
HHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFFSGGTALNEISRRLKAY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
TQNSVHLITPFDSGGSSQVLRKAFGMPAVGDLRSRLMALADETDRGQPEILRLFTHRFAK
HCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
HASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQFQDAAPADLDYRNASIGNLIL
HHHHCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
AGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEIGAELRDGRRVIGQRRMTGKEHA
ECHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHCCCCCCC
PLTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGADLICYPPGSLYSSVICNLLPKGVG
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHH
QAIAARNVPKVYVPSLGTDPECLAMTLSDQISALLAPLRRDAGDVATSAFLSHVICDLSV
HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SEAARAEVLRDHGIPCIARPLAVSSGKSPCYAPDALCRQLLALA
HHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]