| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082444
Identifier: 99082444
GI number: 99082444
Start: 2741685
End: 2742215
Strand: Direct
Name: 99082444
Synonym: TM1040_2604
Alternate gene names: NA
Gene position: 2741685-2742215 (Clockwise)
Preceding gene: 99082443
Following gene: 99082445
Centisome position: 85.65
GC content: 62.52
Gene sequence:
>531_bases ATGAGCTCAGCCCCCACCATAGAAACCGACCGACTGATCCTACGCCCGCATGTTGCGGCGGATCTCGAAGCGTTCTGGTC CTTCTACCAGAGCGACCGGTCGCGCTATATGGATGTGCCCACCAGCCGCTCGCAACTCTGGGCCGGGATGCTGGCCGAGG TCGGCTCCTGGGAGATCTTCGGCTGGGGCGGGCTTGCGATTGAAACCAAGGACGGACAGCTGGCCGGTCAGGTTTGCATC AGCCAGCCTCCGCATTTCCCGGAACTGGAACTGGGCTGGATCGTCTTTGACGGGTTCGAGGGCTTTGGCTACGCCTTTGA AGCAGCCTCCGCGATGCGCGACTACGCCTTTGAAATCCTCGAAGTGCCAACTCTGGTGAGCTACATCGACGGCAACAACC AGCGCTCGGTCGCCCTGGCCAAGCGCATGGGCGCCGTCGAGGATCTCAATGCGCGCACCTATGACGCGGCAGATCAGGTC TATCGTCACAGCCCCGACAGCAGCGGGCCCGGACTGGAGGCCTACGCATGA
Upstream 100 bases:
>100_bases TGGTTTGCCCGGCGGTCTCGGCGGGCTGGGTGGCCTCGGTGGCGGCATGGGCCTGCCCGGTGGCCTCTCTGGATTTGGCA AGAAGAAGTAACCCCCTCAG
Downstream 100 bases:
>100_bases GCACCCCCTCCATTCCCGTGATCGAAACCAAACGCCTGATCCTGCGTGGCCCCGAGGCAGAGGACTACCCGAATTTCAAG GCCACCTTCACCTCGTATCG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase Protein; Acetyltranferase; Ribosomal-Protein-Alanine Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase Family
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRSQLWAGMLAEVGSWEIFGWGGLAIETKDGQLAGQVCI SQPPHFPELELGWIVFDGFEGFGYAFEAASAMRDYAFEILEVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQV YRHSPDSSGPGLEAYA
Sequences:
>Translated_176_residues MSSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRSQLWAGMLAEVGSWEIFGWGGLAIETKDGQLAGQVCI SQPPHFPELELGWIVFDGFEGFGYAFEAASAMRDYAFEILEVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQV YRHSPDSSGPGLEAYA >Mature_175_residues SSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRSQLWAGMLAEVGSWEIFGWGGLAIETKDGQLAGQVCIS QPPHFPELELGWIVFDGFEGFGYAFEAASAMRDYAFEILEVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQVY RHSPDSSGPGLEAYA
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19483; Mature: 19352
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRSQLWAGMLAEVGSWEIF CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEE GWGGLAIETKDGQLAGQVCISQPPHFPELELGWIVFDGFEGFGYAFEAASAMRDYAFEIL ECCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH EVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQVYRHSPDSSGPGLEAYA HHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRSQLWAGMLAEVGSWEIF CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEE GWGGLAIETKDGQLAGQVCISQPPHFPELELGWIVFDGFEGFGYAFEAASAMRDYAFEIL ECCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH EVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQVYRHSPDSSGPGLEAYA HHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA