Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082397

Identifier: 99082397

GI number: 99082397

Start: 2701285

End: 2701614

Strand: Reverse

Name: 99082397

Synonym: TM1040_2557

Alternate gene names: NA

Gene position: 2701614-2701285 (Counterclockwise)

Preceding gene: 99082398

Following gene: 99082396

Centisome position: 84.4

GC content: 62.73

Gene sequence:

>330_bases
ATGTCCCGTCTCACAGCGCGTTTTTGGGTCGATGCCTATCTGGCCCGTCTGCGGTTTCAGGACATACCGGCCTTTGTCAC
AGCCCATGGGGACGATACTGCGGGCGCAGTTCTGGTGAAGCTCAACACGCTGGACGGGCAGGCGCGCGCCTACCAGCGCA
GCTTTGATCTGATGACCGGCGATCGCAAATGGGTCGAACTGGTCGCGGGCGCAGACGGCGATGTCGAGGCCTCCATTGCC
AAGCAACGCCAATTCGACAGCGATCTCTGGGTGATCGAGGTGGAGGACCGCCAGGGGCGGCACCTGTTGGACGAGCCGGG
GCTGGATTAG

Upstream 100 bases:

>100_bases
TGGAGCAAAGGTTTGCTTTTCTTGCACGCGCGCTGCATCTATCCCTGAAGCAAAGAACTCTCCCGCATCCGGAGGGCCGT
GCAATCGCCAAGGAGCTTCC

Downstream 100 bases:

>100_bases
AGAATGGACTGGCGCGATCAAGGCATATTGCTCACGGTGCGCCGCCATGGCGAATCCTCGGCGTTGATCGAAGTCTTCAC
TGAAGATCATGGGTTGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTLDGQARAYQRSFDLMTGDRKWVELVAGADGDVEASIA
KQRQFDSDLWVIEVEDRQGRHLLDEPGLD

Sequences:

>Translated_109_residues
MSRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTLDGQARAYQRSFDLMTGDRKWVELVAGADGDVEASIA
KQRQFDSDLWVIEVEDRQGRHLLDEPGLD
>Mature_108_residues
SRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTLDGQARAYQRSFDLMTGDRKWVELVAGADGDVEASIAK
QRQFDSDLWVIEVEDRQGRHLLDEPGLD

Specific function: Unknown

COG id: COG5447

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12280; Mature: 12149

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTLDGQARAYQRSFDLMTG
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCCC
DRKWVELVAGADGDVEASIAKQRQFDSDLWVIEVEDRQGRHLLDEPGLD
CHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTLDGQARAYQRSFDLMTG
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHCCCCCC
DRKWVELVAGADGDVEASIAKQRQFDSDLWVIEVEDRQGRHLLDEPGLD
CHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA