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The map label for this gene is 99082384

Identifier: 99082384

GI number: 99082384

Start: 2685136

End: 2685864

Strand: Reverse

Name: 99082384

Synonym: TM1040_2544

Alternate gene names: NA

Gene position: 2685864-2685136 (Counterclockwise)

Preceding gene: 99082385

Following gene: 99082383

Centisome position: 83.91

GC content: 59.26

Gene sequence:

>729_bases
ATGGCAATTCTCGACAAACATAAAATCCTCGAGACCAACGCAACGCTTCTGCTGATCTGTTCCTTTCTCGTGGTTACCAT
CGGTGGCCTGGTACAGATCACCCCGCTGTTCTATCTAGAGAACACCATCGAGGAGGTGGAGGGCATGCGTCCCTACACCC
CCCTCGAGCTGGCGGGGCGGGAGATCTACATCCGCGAAGGATGCTACGTCTGTCACAGCCAGATGATCCGTCCGATGCGG
GATGAGGTTGAACGCTACGGTCACTATTCGCTGGCGGCGGAGTCGATGTACGACCACCCGCACCAGTGGGGCTCCAAGCG
CACCGGGCCGGATCTGGCCCGGGTTGGCGGGCGCTACTCGGACGAGTGGCACGTCGATCACCTGCGTGACCCGCAGGCGG
TTGTGCCAGAGTCGGTCATGCCCAAGTATGACTTCCTGGAGCGCACCCGTATTGATGGCAAATACATCGGAGAACTGATG
GCCACCAATGCGATTGTCGGTGTCCCCTATACCGAGGCGATGATCGAAGAAGCTCGTCGCGACTTCCGCGCACAAGCCGA
TCCCGACAGCGATTATGACGGGCTGCTGGAGCGCTACGGCGAGAGCGTCAATGTGCGCAACTTTGATGGTCAGCCCGGTG
TATCCGAGGCGGATGCATTGATCGCCTATCTGCAGATGCTCGGCACGTTGGTCGATTTCTCGACCTTCACACCCGACGCA
AGCCGCTAA

Upstream 100 bases:

>100_bases
TGGTCATGTGCTATAACCTCTGGATGACCGTTCGTCGGGCGCCGGCCAAAGAGGCCAGCCTGTCCGTCGCGGTCCCGGCT
GAATAAGGAGGGCCGGAGAG

Downstream 100 bases:

>100_bases
GGGAGGATTGAGCCATGGAAACCTATTCGCTGCTGCGAGAGTTCGCCGACAGCTGGATGCTTCTCTTTCTGTTCCTCTTC
TTCATTGGTGTTGTGATCTG

Product: cbb3-type cytochrome c oxidase subunit II

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase FixO Chain; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cytochrome Cbb3 Oxidase Diheme Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIEEVEGMRPYTPLELAGREIYIREGCYVCHSQMIRPMR
DEVERYGHYSLAAESMYDHPHQWGSKRTGPDLARVGGRYSDEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELM
ATNAIVGVPYTEAMIEEARRDFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEADALIAYLQMLGTLVDFSTFTPDA
SR

Sequences:

>Translated_242_residues
MAILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIEEVEGMRPYTPLELAGREIYIREGCYVCHSQMIRPMR
DEVERYGHYSLAAESMYDHPHQWGSKRTGPDLARVGGRYSDEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELM
ATNAIVGVPYTEAMIEEARRDFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEADALIAYLQMLGTLVDFSTFTPDA
SR
>Mature_241_residues
AILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIEEVEGMRPYTPLELAGREIYIREGCYVCHSQMIRPMRD
EVERYGHYSLAAESMYDHPHQWGSKRTGPDLARVGGRYSDEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELMA
TNAIVGVPYTEAMIEEARRDFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEADALIAYLQMLGTLVDFSTFTPDAS
R

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 27474; Mature: 27343

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIEEVEGMRPYTPLELAGR
CCCCCCCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
EIYIREGCYVCHSQMIRPMRDEVERYGHYSLAAESMYDHPHQWGSKRTGPDLARVGGRYS
EEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCC
DEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELMATNAIVGVPYTEAMIEEARR
CCCCHHHCCCCHHHCCHHHCCCHHHHHHHCCCHHHHHHHHHHCCEECCCHHHHHHHHHHH
DFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEADALIAYLQMLGTLVDFSTFTPDA
HHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SR
CC
>Mature Secondary Structure 
AILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIEEVEGMRPYTPLELAGR
CCCCCCHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
EIYIREGCYVCHSQMIRPMRDEVERYGHYSLAAESMYDHPHQWGSKRTGPDLARVGGRYS
EEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCC
DEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELMATNAIVGVPYTEAMIEEARR
CCCCHHHCCCCHHHCCHHHCCCHHHHHHHCCCHHHHHHHHHHCCEECCCHHHHHHHHHHH
DFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEADALIAYLQMLGTLVDFSTFTPDA
HHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA