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The map label for this gene is rdxB [H]

Identifier: 99082380

GI number: 99082380

Start: 2680904

End: 2682334

Strand: Reverse

Name: rdxB [H]

Synonym: TM1040_2540

Alternate gene names: 99082380

Gene position: 2682334-2680904 (Counterclockwise)

Preceding gene: 99082381

Following gene: 99082379

Centisome position: 83.8

GC content: 58.84

Gene sequence:

>1431_bases
TTGAGCGATTCGAGCCAAACCCCCAGCCTTTACGCCGCGCGAGAGCCAATCTTTCCCCGTCGCGTATCGGGAAAGTTTCG
CACCCTCAAATGGGTGATCATGGCCGTCACACTGGGGATCTACTACCTGCTGCCATGGATCCGCTGGGATCGTGGACCCG
AGTTGCCGGATCAGGCGGTCCTCCTCGATCTGGCCGGGCGGCGGTTTTACTTCTTCTGGATCGAGATCTGGCCACATGAG
TTCTATTTTGTGGCGGGCCTTTTGATCATGGCCGGCCTAGGGCTGTTTCTCTTTACCTCGGCCTTGGGGAGGGTCTGGTG
CGGTTATGCCTGTCCGCAAACTGTCTGGACCGATCTCTTCATTCTGGTGGAGCGCTGGATCGAAGGGGATCGAAATGCGC
GCCTGCGCTTGCACCGTCAGAAAAAATGGGACTTCAAAAAGGTTCGCCTGCGGGTCACCAAATGGGTCGCCTGGCTGTTG
ATCGGTCTTGCGACTGGTGGGGCGTGGGTCTTCTATTTTGCAGATGCGCCGACACTGCTTCAGGATCTGGTGACGGGGCA
AGCGCATCCGGTGGCCTACACGACGATGGCGATCCTGACTTTTACGACCTTCTTTTTTGGCGGTTTTGCGCGCGAACAGA
TCTGCATCTATGCCTGCCCATGGCCCCGTATCCAGGCGGCTATGATGGACGAGGACACGCTGACGGTGGGCTATCGCGAT
TGGCGTGGTGAGCCGCGCGGCAAACACCGCAAATCCGCTGAGGCGGAGCAGTTGGGCGACTGTATCGACTGCATGGCCTG
TGTGAACGTCTGCCCGATGGGAATCGACATTCGGGACGGGCAGCAGATGGAGTGCATCACCTGCGCGCTTTGTATCGACG
CTTGCGACGACATCATGGCCAAAGTGGGCAAACCACGCGGGCTGATCGACTACATGGCGCTTTCAGACGAGACACAGGAA
CGTGCAGGCAAGCCGCCGCGCCCGGTCTGGAAGCACATTTTGCGCCCACGTACGATCATGTACACAACCCTCTGGGGAGG
TGTTGGTCTGGCGCTTGTCTTTGCGCTCTTCATTCGAGCAGACATCAACATGACCGTCGCACCCGTGCGCAACCCGACTT
ATGTGACTCTGTCGGATGGCACTATCCGCAACACCTACGACGTGCGCCTCTCGAACAAGAACGGGGAGGCTCGGATCTTT
GAGATGTCGATTGTTGGTGATCCTACGCTCTCTGTCACGCTTGAGGGCGAAGAAGGCACCAAGGTCGAGGTGCCCGCAGA
CAGCGCCGAATTGCAGCGGGTCTATGTCTCTGCACCACGGGACAGCGCGCCGGCAGAGGCGGAAAACACTGGCCTGAGAC
TCTGGGTCGAAGATTTGACCTCAGGCGAGCGCGCCTATCGTGACACGACATTCAACGGACGGGGGAACTGA

Upstream 100 bases:

>100_bases
AAATGCACATGCGAGATGCGATTTTTGATCCACGTCAAAGTCTCGACCGCTGGCCTCTGAGAGAACACAATCAGACCTGT
CACAGGATCGGAGCCAGAAG

Downstream 100 bases:

>100_bases
TCCATGCATAGCGAAACCACAAAAGCACCCCGCCAGTTCACCGGCAAACATATGCTTGCAGTCTGTGTGGGGGCCTTTGG
GATCATCATTTCGGTGAACC

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MSDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLLPWIRWDRGPELPDQAVLLDLAGRRFYFFWIEIWPHE
FYFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLL
IGLATGGAWVFYFADAPTLLQDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRD
WRGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGIDIRDGQQMECITCALCIDACDDIMAKVGKPRGLIDYMALSDETQE
RAGKPPRPVWKHILRPRTIMYTTLWGGVGLALVFALFIRADINMTVAPVRNPTYVTLSDGTIRNTYDVRLSNKNGEARIF
EMSIVGDPTLSVTLEGEEGTKVEVPADSAELQRVYVSAPRDSAPAEAENTGLRLWVEDLTSGERAYRDTTFNGRGN

Sequences:

>Translated_476_residues
MSDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLLPWIRWDRGPELPDQAVLLDLAGRRFYFFWIEIWPHE
FYFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLL
IGLATGGAWVFYFADAPTLLQDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRD
WRGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGIDIRDGQQMECITCALCIDACDDIMAKVGKPRGLIDYMALSDETQE
RAGKPPRPVWKHILRPRTIMYTTLWGGVGLALVFALFIRADINMTVAPVRNPTYVTLSDGTIRNTYDVRLSNKNGEARIF
EMSIVGDPTLSVTLEGEEGTKVEVPADSAELQRVYVSAPRDSAPAEAENTGLRLWVEDLTSGERAYRDTTFNGRGN
>Mature_475_residues
SDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLLPWIRWDRGPELPDQAVLLDLAGRRFYFFWIEIWPHEF
YFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLLI
GLATGGAWVFYFADAPTLLQDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRDW
RGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGIDIRDGQQMECITCALCIDACDDIMAKVGKPRGLIDYMALSDETQER
AGKPPRPVWKHILRPRTIMYTTLWGGVGLALVFALFIRADINMTVAPVRNPTYVTLSDGTIRNTYDVRLSNKNGEARIFE
MSIVGDPTLSVTLEGEEGTKVEVPADSAELQRVYVSAPRDSAPAEAENTGLRLWVEDLTSGERAYRDTTFNGRGN

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53967; Mature: 53836

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLLPWIRWDRGPELPDQAV
CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHE
LLDLAGRRFYFFWIEIWPHEFYFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLF
EEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLLIGLATGGAWVFYFADAPTLL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
QDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRD
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHEEECCCEEEEEEHH
WRGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGIDIRDGQQMECITCALCIDACDDIMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
KVGKPRGLIDYMALSDETQERAGKPPRPVWKHILRPRTIMYTTLWGGVGLALVFALFIRA
HCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHC
DINMTVAPVRNPTYVTLSDGTIRNTYDVRLSNKNGEARIFEMSIVGDPTLSVTLEGEEGT
CCCEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCC
KVEVPADSAELQRVYVSAPRDSAPAEAENTGLRLWVEDLTSGERAYRDTTFNGRGN
EEECCCCHHHHEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
SDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLLPWIRWDRGPELPDQAV
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHE
LLDLAGRRFYFFWIEIWPHEFYFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLF
EEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLLIGLATGGAWVFYFADAPTLL
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
QDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYACPWPRIQAAMMDEDTLTVGYRD
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHEEECCCEEEEEEHH
WRGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGIDIRDGQQMECITCALCIDACDDIMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
KVGKPRGLIDYMALSDETQERAGKPPRPVWKHILRPRTIMYTTLWGGVGLALVFALFIRA
HCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHC
DINMTVAPVRNPTYVTLSDGTIRNTYDVRLSNKNGEARIFEMSIVGDPTLSVTLEGEEGT
CCCEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCC
KVEVPADSAELQRVYVSAPRDSAPAEAENTGLRLWVEDLTSGERAYRDTTFNGRGN
EEECCCCHHHHEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]