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The map label for this gene is vacJ [C]

Identifier: 99082320

GI number: 99082320

Start: 2620035

End: 2620835

Strand: Direct

Name: vacJ [C]

Synonym: TM1040_2480

Alternate gene names: 99082320

Gene position: 2620035-2620835 (Clockwise)

Preceding gene: 99082313

Following gene: 99082321

Centisome position: 81.85

GC content: 57.68

Gene sequence:

>801_bases
ATGCGTGACCCGGCGCCAGTTATAACTGAATTGGTAGACATGATTGCCCTGTTTAAAAAATCCGTGACCGCGATGGCCTT
TTCCGCGGCGGTCCTGACTTCGGCCTGTGCCACCCAAGACCCTGCCGCCAAGGCCGCCGGTGAGATTTTCGACCCCTACG
AGAATACAAACCGCTCCATTCACCAGTTCAACAAAGGGCTCGACCGCTATGCGTTCCGCCCGGCGTCCAAAGGCTACGTC
GCTGTGGTTCCGCCCGATATGGTTACGGCTTTTGGCAATTTTGCCGAGAACCTGTCCAAGCCTGGCGACGCAGTGAACTA
TCTGCTACAGGGAAATTTCAAAGGTGCTGGGCAAGCGCTGGGGCGTTTTGCCGTGAACACCGTCCTCGGGATCGGTGGGC
TTGGCGATCCCGCATCTGATTTCAAGATGCCCGAAGCCCGGACCGACTTTGGTGAGACCCTGCATATCTGGGGTGCGGGC
GAAGGCGCCTATGTGGAGCTGCCCGCTTATGGTCCCTCCACCACCCGTGATGCTGTCGGGATCGTGGTCGACTTTTTCAC
CAACCCGCTCAGCCAGTTTGAGAACAATCCCGCCGAAGACCTGCAGATCCCGGCCGAGATCGTGGATCAGCTTGGCAATC
GCGGTACATATTCCGACACGATCGATTCGATTCTTTACGAGAGCGCCGACAGCTACGCACAGGGCCGCCAGATCTACCTG
CAGAACCGCCGTTTCGAGCTGGGGCAGGAAGACGTGAATTCCGAGATCGATCCGTTCGAACTAGATACCGGAGGGTTCTA
A

Upstream 100 bases:

>100_bases
TTCAAAGAGTGACTGGAATCTGTTCCATATCTGTCACATTATATGGCTTTGCTGTGATCCGGGCTGGGAAGTGACGCAAA
GATTGCTAAGTGACCCTAGG

Downstream 100 bases:

>100_bases
GCCATGCTTCGCCGTCACTTCCTCGCCTCGCTTGCAGCGGTTGGCGTATCCACCACAGCGTTGCCCGCCCTTGCGCTCAA
TGAAAGCTCGGCGTCGGCCC

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAKAAGEIFDPYENTNRSIHQFNKGLDRYAFRPASKGYV
AVVPPDMVTAFGNFAENLSKPGDAVNYLLQGNFKGAGQALGRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAG
EGAYVELPAYGPSTTRDAVGIVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYSDTIDSILYESADSYAQGRQIYL
QNRRFELGQEDVNSEIDPFELDTGGF

Sequences:

>Translated_266_residues
MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAKAAGEIFDPYENTNRSIHQFNKGLDRYAFRPASKGYV
AVVPPDMVTAFGNFAENLSKPGDAVNYLLQGNFKGAGQALGRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAG
EGAYVELPAYGPSTTRDAVGIVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYSDTIDSILYESADSYAQGRQIYL
QNRRFELGQEDVNSEIDPFELDTGGF
>Mature_266_residues
MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAKAAGEIFDPYENTNRSIHQFNKGLDRYAFRPASKGYV
AVVPPDMVTAFGNFAENLSKPGDAVNYLLQGNFKGAGQALGRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAG
EGAYVELPAYGPSTTRDAVGIVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYSDTIDSILYESADSYAQGRQIYL
QNRRFELGQEDVNSEIDPFELDTGGF

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=231, Percent_Identity=32.4675324675325, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 28715; Mature: 28715

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAKAAGEIFDPYENTNRSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHH
HQFNKGLDRYAFRPASKGYVAVVPPDMVTAFGNFAENLSKPGDAVNYLLQGNFKGAGQAL
HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
GRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAGEGAYVELPAYGPSTTRDAVG
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHH
IVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYSDTIDSILYESADSYAQGRQIYL
HHHHHHHCHHHHHCCCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
QNRRFELGQEDVNSEIDPFELDTGGF
ECCCCCCCHHHCCCCCCCEECCCCCC
>Mature Secondary Structure
MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAKAAGEIFDPYENTNRSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHH
HQFNKGLDRYAFRPASKGYVAVVPPDMVTAFGNFAENLSKPGDAVNYLLQGNFKGAGQAL
HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
GRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAGEGAYVELPAYGPSTTRDAVG
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHH
IVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYSDTIDSILYESADSYAQGRQIYL
HHHHHHHCHHHHHCCCCHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
QNRRFELGQEDVNSEIDPFELDTGGF
ECCCCCCCHHHCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA