| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is phhB
Identifier: 99082314
GI number: 99082314
Start: 2613915
End: 2614211
Strand: Reverse
Name: phhB
Synonym: TM1040_2474
Alternate gene names: NA
Gene position: 2614211-2613915 (Counterclockwise)
Preceding gene: 99082315
Following gene: 99082311
Centisome position: 81.67
GC content: 52.86
Gene sequence:
>297_bases ATGACCGAGAAGCTTTCCGATGAAACCCGAGGCCCCCTGCTGGAGCCATTATTCGCTACGGGATGGGAACTTGAAACAGG ACGAGATGCGATTCGAAAAACCTATGAGTTTGCGGACTTTGTGGAGGCCTTTGCCTTCATGACAAAGGCCGCGATCTGGG CGGAAAAATGGAATCACCATCCAGAATGGAGCAATATCTACAACAAAGTGACGGTTGTTCTGACCACCCATGACGTCGGC GGGGTGAGCTCCCTCGATGCAAAGCTCGCCCGAAAGATGGATGGTCTGACCTCCTAG
Upstream 100 bases:
>100_bases TCGAACAATATCTGGAGGCAGAACGGGCTGCCGTAGGAGAAGAGATCGAGATCCTCACCTCCTATGGGCCGTTCAAGAAG ACCCATGTGGAGGAACAGGA
Downstream 100 bases:
>100_bases CTCTTGCAGAGAGCGGTAAGGACACAACAGGTGCGCCAGATCGGAAGGCGCTAGGCAGCCAGCGCGCAGTCTCATCGCGT TCTTCAGGTCAGAGACGGTG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAFAFMTKAAIWAEKWNHHPEWSNIYNKVTVVLTTHDVG GVSSLDAKLARKMDGLTS
Sequences:
>Translated_98_residues MTEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAFAFMTKAAIWAEKWNHHPEWSNIYNKVTVVLTTHDVG GVSSLDAKLARKMDGLTS >Mature_97_residues TEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAFAFMTKAAIWAEKWNHHPEWSNIYNKVTVVLTTHDVGG VSSLDAKLARKMDGLTS
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI4557831, Length=87, Percent_Identity=52.8735632183908, Blast_Score=97, Evalue=2e-21, Organism=Homo sapiens, GI134133240, Length=90, Percent_Identity=47.7777777777778, Blast_Score=96, Evalue=9e-21, Organism=Caenorhabditis elegans, GI115533705, Length=86, Percent_Identity=53.4883720930233, Blast_Score=100, Evalue=1e-22, Organism=Drosophila melanogaster, GI45549100, Length=94, Percent_Identity=52.1276595744681, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_SILST (Q1GDR0)
Other databases:
- EMBL: CP000377 - RefSeq: YP_614468.1 - ProteinModelPortal: Q1GDR0 - SMR: Q1GDR0 - STRING: Q1GDR0 - GeneID: 4076839 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_2474 - NMPDR: fig|292414.1.peg.807 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: SEERKTR - ProtClustDB: PRK00823 - BioCyc: SSP292414:TM1040_2474-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11091; Mature: 10959
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAFAFMTKAAIWAEKWNHH CCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEWSNIYNKVTVVLTTHDVGGVSSLDAKLARKMDGLTS CCHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAFAFMTKAAIWAEKWNHH CCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEWSNIYNKVTVVLTTHDVGGVSSLDAKLARKMDGLTS CCHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA