| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082306
Identifier: 99082306
GI number: 99082306
Start: 2607061
End: 2607786
Strand: Reverse
Name: 99082306
Synonym: TM1040_2466
Alternate gene names: NA
Gene position: 2607786-2607061 (Counterclockwise)
Preceding gene: 99082307
Following gene: 99082305
Centisome position: 81.47
GC content: 60.61
Gene sequence:
>726_bases GTGACAGAGGCGCAGACCGATCCCAAATATTATGATGTGGTAGAGGCCACATGGCCTTGTCTGCGATGCGAAAAGCTAGG CGATATCACTTTGCGCGTCGGTGCAGGCGGAGGGAGCCGTGTGAGTGCCGCAACCTGCGACGCCTTGGTGAGTGACGCCC AGATCGCCCAAGCCGAAGCGGCAATGCAGGACTTCGACCAGCCGCGCCTGTTTATGATCCGCGATGGGCAAGACGCGCTC GACGGTCAGTTGGAACGCTTGGGCTATGCGGTGATGGACCCGGTCGCCCTCTGGACGGTCGCACCGTCAATGTTGACGGA TGTCGAAATCCCGCGGGTGACGACGTTTTGCCTGTGGGAGCCCTTGGCCATCCAGCGAGAAATCTGGGCCACTGGTGGCA TTGGACCTGAACGTCTGGCCATCATGGAGCGGGCAACTCGTCCCAAGACTTCGATCTTGGGGCGTTGGGACGATAAACCT GCAGGGGCAGCCTTTGTCGGGATGCATGAAGGTATTGCCATGCTGCATGCGCTTGAGATCCTGCCGCATCAACGGCGCAA GGGCATGGGCGTTTGGATGATGCGGCAAGCCGCCTATTGGGCTGCCGAGCAAGGCGCAACCGAGCTTGCGGTCCTGTGTA CCCGTGCCAATGCTGGCGCCAATGCGCTCTATGCCCGTCTGGGGATGCAGCAGGCTGGCGGTTATCACTACCGGATCAAA CGCTAG
Upstream 100 bases:
>100_bases TTCAGGTCAACGGTGCTTTTGGCGCCAATGTCGTTGTGCGCGGAACAGAAGGCGCGCGTGTGGACGCCGCAATCACAGAG CTTGCACGGGATCTCGGCGT
Downstream 100 bases:
>100_bases AAGACCACGCGCCGGAGGAGGGCGTTGAAATGACGAAACCAAAGGAGCCAACCGCGCTAGACCTGCCCATGGCTGATCCA CTTCCCGACGAGACACAGAA
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Acetyltransferase GNAT Family; Acetyl Transferase; GNAT Family Acetyltransferase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAATCDALVSDAQIAQAEAAMQDFDQPRLFMIRDGQDAL DGQLERLGYAVMDPVALWTVAPSMLTDVEIPRVTTFCLWEPLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKP AGAAFVGMHEGIAMLHALEILPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANAGANALYARLGMQQAGGYHYRIK R
Sequences:
>Translated_241_residues MTEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAATCDALVSDAQIAQAEAAMQDFDQPRLFMIRDGQDAL DGQLERLGYAVMDPVALWTVAPSMLTDVEIPRVTTFCLWEPLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKP AGAAFVGMHEGIAMLHALEILPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANAGANALYARLGMQQAGGYHYRIK R >Mature_240_residues TEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAATCDALVSDAQIAQAEAAMQDFDQPRLFMIRDGQDALD GQLERLGYAVMDPVALWTVAPSMLTDVEIPRVTTFCLWEPLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKPA GAAFVGMHEGIAMLHALEILPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANAGANALYARLGMQQAGGYHYRIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26497; Mature: 26366
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAATCDALVSDAQIAQAEA CCCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH AMQDFDQPRLFMIRDGQDALDGQLERLGYAVMDPVALWTVAPSMLTDVEIPRVTTFCLWE HHHHCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCHHHHHCCCCCCEEHHHHCC PLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKPAGAAFVGMHEGIAMLHALEI CHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHH LPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANAGANALYARLGMQQAGGYHYRIK CCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC R C >Mature Secondary Structure TEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAATCDALVSDAQIAQAEA CCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH AMQDFDQPRLFMIRDGQDALDGQLERLGYAVMDPVALWTVAPSMLTDVEIPRVTTFCLWE HHHHCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCHHHHHCCCCCCEEHHHHCC PLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKPAGAAFVGMHEGIAMLHALEI CHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHH LPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANAGANALYARLGMQQAGGYHYRIK CCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA