| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yieF [H]
Identifier: 99082287
GI number: 99082287
Start: 2588565
End: 2589110
Strand: Reverse
Name: yieF [H]
Synonym: TM1040_2447
Alternate gene names: 99082287
Gene position: 2589110-2588565 (Counterclockwise)
Preceding gene: 99082288
Following gene: 99082284
Centisome position: 80.89
GC content: 63.37
Gene sequence:
>546_bases ATGGCTGATCCGGTATTGCTTATTCTCTCCGGCTCCTTGCGCAAGGAGGCAACCAACCTCAAACTCGCCCGTGAGGCCGC GCGGCTATTTGGGTCCGCCGAGGTGATCGAGGGCGGTCTGAATATGCCGCTCTATGATGGGGATCTTGAAAGCGCTGAGG GCATTCCCGCAGTGGTGCAGGCTCTGGCAGATCAGATCGCGCGCGCGGACGCGGTTGTGATCTCGACACCGGAATACAAC AAAGGGCCTTCGGGGGTGCTCAAGAATGCGCTTGATTGGGTCAGCCGCACCGAGGGCAATCCATGGCAGGACAAGCCTGT TGCAGTGATGTCCGCGGCCGCCGGGCGTGCGGGTGGGGAGCGGGCGCAGATGGTGCTGCGCAGCTTCATGGTGCCGTTTC GAGCCAATGTCCTGCCGGGGCCAGAAGTGCACCTTGCGGGCTCCAGCAAGGAGTTTGACGACGCCGGGCGGCTCACAAGC GAGCAGTACACCAAAACCCTTCTGGCCCTGATGACCGGGCTGCGCGCCTTGGCGACGCGCGCCTGA
Upstream 100 bases:
>100_bases GTGTGGCAATGCACACCCCGCCTGCGGTGATCCCTGTTTGTCTGAGCCGGGGAAGAGCCTAGCTTTCAACACGAAACAGA TTTTCTGAAAGGACTTATCG
Downstream 100 bases:
>100_bases GAAGGTGCGGGGCGACGCCAGTTGCCCCACAGCAAGGGGCGTCAGAGCGCGGGCGGCTCGATGCCGTCCGCCTCGAGCTT GTTATCCGGCTCGACATGGA
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPLYDGDLESAEGIPAVVQALADQIARADAVVISTPEYN KGPSGVLKNALDWVSRTEGNPWQDKPVAVMSAAAGRAGGERAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTS EQYTKTLLALMTGLRALATRA
Sequences:
>Translated_181_residues MADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPLYDGDLESAEGIPAVVQALADQIARADAVVISTPEYN KGPSGVLKNALDWVSRTEGNPWQDKPVAVMSAAAGRAGGERAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTS EQYTKTLLALMTGLRALATRA >Mature_180_residues ADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPLYDGDLESAEGIPAVVQALADQIARADAVVISTPEYNK GPSGVLKNALDWVSRTEGNPWQDKPVAVMSAAAGRAGGERAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTSE QYTKTLLALMTGLRALATRA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=140, Percent_Identity=44.2857142857143, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19175; Mature: 19044
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPLYDGDLESAEGIPAVVQ CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCCCCHHHHH ALADQIARADAVVISTPEYNKGPSGVLKNALDWVSRTEGNPWQDKPVAVMSAAAGRAGGE HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHH RAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTSEQYTKTLLALMTGLRALATR HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure ADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPLYDGDLESAEGIPAVVQ CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCCCCHHHHH ALADQIARADAVVISTPEYNKGPSGVLKNALDWVSRTEGNPWQDKPVAVMSAAAGRAGGE HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHH RAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTSEQYTKTLLALMTGLRALATR HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]