| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082283
Identifier: 99082283
GI number: 99082283
Start: 2584215
End: 2584895
Strand: Reverse
Name: 99082283
Synonym: TM1040_2443
Alternate gene names: NA
Gene position: 2584895-2584215 (Counterclockwise)
Preceding gene: 99082284
Following gene: 99082281
Centisome position: 80.75
GC content: 61.09
Gene sequence:
>681_bases ATGATCCGTCGCGCGCTCTTATTGCTCAGTTTTTGCTTTCTTACAGCCTGTGGCGCAACCGTCACCGGAACCGACACCCG CATCCTCGCGATAGGCGATTCCCTGATGGCGTGGAATGGTCTGTCCCAGCAATCTATCCCCGATGTTGTCTCCAAAGAAC TGGGCGAGCCGGTCGCTGATCGCTCCGTGCTGGGCGCGCGCATGATCTATCGTCTGCCGATCAGCGGTGCGGCGGGTCTG TCGATCCCAAAGCAATACCGCGGGGGGAAATGGGAGTGGGTGATCCTCAATGGCGGTGGCAACGATCTTTGGCTGGGCTG TGGCTGCGGGCAATGTGACCGCAAGATGGACAAGCTCATCTCGCAGGATGGCGCAACCGGGGCGTTTCCCGAACTTGTCA TGCGCATTCGCGAAAGCGACGCCCGAGTGATCATGCTCGGATATTTGCGCACGCCGGGTCGGTCATCTCCGATCGAGAAT TGCCGAGACGAAGGCGACCTGCTGGATGCGCGGCTTGCGCAGCTGGCGGCTGGGGATGCCGGTGTGACGTTTCTGCCTGC GGCCGATCTGGTCCCTTATGGCGATCTGAGCTTTCACGCCCCGGACCGCATTCACCCTTCGCCCAAAGCCAGCCGGATCA TCGCAGAGCGGGTGGCCGCCATCATCAACGCACAGCGATAA
Upstream 100 bases:
>100_bases GTAAGGTGGCGCAATGGGCGGACAGCGTTTCCATCCCGGGGTGCGCTGTCCGACGAGAGGTTTAACTTCCTGTACGCCTC TTTTGTGCTAGACCTCGTTT
Downstream 100 bases:
>100_bases GCCAAAGGGTGGAACGCGCCCTTGCGGGGCTAAGCCCTGCCGCCCCCTTATCGCGGAACACAAAAAAGCCCCCTCCGGAT TGAACGGAGAGGGCTTTGTA
Product: lipolytic enzyme, G-D-S-L
Products: NA
Alternate protein names: Lipolytic; GDSL-Like Lipase/Acylhydrolase
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQSIPDVVSKELGEPVADRSVLGARMIYRLPISGAAGL SIPKQYRGGKWEWVILNGGGNDLWLGCGCGQCDRKMDKLISQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIEN CRDEGDLLDARLAQLAAGDAGVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERVAAIINAQR
Sequences:
>Translated_226_residues MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQSIPDVVSKELGEPVADRSVLGARMIYRLPISGAAGL SIPKQYRGGKWEWVILNGGGNDLWLGCGCGQCDRKMDKLISQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIEN CRDEGDLLDARLAQLAAGDAGVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERVAAIINAQR >Mature_226_residues MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQSIPDVVSKELGEPVADRSVLGARMIYRLPISGAAGL SIPKQYRGGKWEWVILNGGGNDLWLGCGCGQCDRKMDKLISQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIEN CRDEGDLLDARLAQLAAGDAGVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERVAAIINAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24293; Mature: 24293
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQSIPDVVSKELGEPVAD CHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCHHH RSVLGARMIYRLPISGAAGLSIPKQYRGGKWEWVILNGGGNDLWLGCGCGQCDRKMDKLI HHHHHHHHHEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHH SQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIENCRDEGDLLDARLAQLAAGDA HCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHCCCC GVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERVAAIINAQR CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQSIPDVVSKELGEPVAD CHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCHHH RSVLGARMIYRLPISGAAGLSIPKQYRGGKWEWVILNGGGNDLWLGCGCGQCDRKMDKLI HHHHHHHHHEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHH SQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIENCRDEGDLLDARLAQLAAGDA HCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHCCCC GVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERVAAIINAQR CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA