| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is chvG [H]
Identifier: 99082280
GI number: 99082280
Start: 2579623
End: 2581356
Strand: Reverse
Name: chvG [H]
Synonym: TM1040_2440
Alternate gene names: 99082280
Gene position: 2581356-2579623 (Counterclockwise)
Preceding gene: 99082281
Following gene: 99082279
Centisome position: 80.64
GC content: 59.05
Gene sequence:
>1734_bases ATGCGCGATAGTAGCATGACCGATACACACCGGCAGACGGGCCGGGATTCACGCCGGGACGGGGATCTGGTGCTGGGTGA CGATTGGGTCGCACCAGAGCAGACGGTCGGGCGCGAAATGCGGGCCAAACGGGCGCGGCGTGGCTGGTTTTCGCTGCGCG GTTCTCCGCTGGCGCGTAAAATCATCACCTTCAACCTGATTGCACTGATCATCCTTGTGTCGGGGATCCTCTATTTGAAC TCCGCGCGGCAGAGCCTTGTATACCAGCGGCTTGGCACATTGGTATCCGAGGCGATGCTGGCTACGGATGTACTTGAGGT GCAGCTTTTTGAGGGGGGCGAGGCTGGTGTCACACCCAGCGCGGAGGATATTTCGCGCACGCTCGATAATATTTCGTTGC GTGGCGGCGTTGAAATTTTTGTGTTTGATACGTCGCTGACCCTGTTGGACCAGCAAAAAGGCGTCATGCGTGCGGATGCG CTCAATCGGCTCAACGACAATGAGGGCGGGCGCACCCTGATCACTGACACGCTCAAGGCGATCTGGTCTGCGGTGGGCGG CGAAAGCGCGCCGGAAAACGTCGTGGCCGAGATCGACCTGACCGAACCCCAGCTTTTGTCTCTCATTCAGCGTGCGCTCA GCGATGGAACACAGGTGGGGGCGGTGCCCGACAGTGCAGGCGGAACCGTTTACGCCGCGACCAATCCGATTTTGCAGCAG GGCCAGGCAACGGGCGTTCTGTTGATGACTTCGGCAACTGGCGAAATCGACCGTCTCGTCCGCATCGAACGTGAGCGGGT ATTGCAGATGTTCATCGTCGCCCTCCTGGTCTCTATCGGGTTGAGCCTCGTGCTGGCTTCCACGATCGCCAACCCCCTTG CCGATCTGGCCGAGGCGGCAGAGCTCGGCAAGGACCGCGACAACGACAAGGTCAAACCGGGACGCATTCGCATTCCGGAC CTCTCGGCGCGCCCGGATGAGATCGGCCGCCTGAGCCGCGCCCTGCGTGGAATGGTCAAAGCGCTCTATAATCGTATCGA TAGTAACGAACAATTTGCAGCTGATGTGGCACATGAGATCAAGAATCCTCTGGCCAGTTTGCAGTCTGCGGTCGGCACGC TCCGGATGGTTCACCGAGAAGACCAACGGGAGAAGCTGATGGAAGTGATTGAACATGATGTGCGCCGTCTCGATCGGTTG GTGAGCGACATTTCCAATGCGTCCCGGTTGGATGCAGAGCTGGTGAAAGAGGACGAAGAAGACTTTGACCTTCTCAAGAT GCTCGGCAATCTCAACCAGTATTTGGGCGAAGACGCCCGCGGCAAGGGAATCGATTACATCACCGAGCTGCCGAATGAGC CGATCTTGATCCGGGGTCTCGAGGCCCGTTTGGCGCAGGTTTTTGTCAATCTGATCACCAACGCAATTTCGTTCTGCGAA GAGGGCGATGCGATCCGTGTCTGGGCGCGGCGGCGGGACAATCGTGTCCTGATCGTGGTCGAAGACACCGGCCCCGGCAT TCCAGAGCAGGCATTGTCCAAGGTCTTCAAGCGCTTCTATTCTCAGCGCCCCGAAGAGCATTTTGGCAACAATTCCGGCC TTGGGCTTGCGATTTCCAAGCAGATTGTTGAGGCGCATGGCGGCGTGATCTGGGCGGAGAACATTCGCCCCACCGAGGCG GATCTGACCTCCGAGCCGCTCGGAGCTCGTTTTGTGGTCGGTCTGCCGGTCTGA
Upstream 100 bases:
>100_bases TGCGGATTTCGCAGCGATCGAGACCCTCTATGGGATCGGCTACCGCTACAATGAAGAATAAGACCCCGACTTTCGGGGTC TTTGGCGGAGACATGCGTGC
Downstream 100 bases:
>100_bases GCGGGTGAATACCGCGTCGCCCGACCTCGACGTCATTTTATTGCACGCCAGTTGCGTCGCGCTCGATGAGCGCGGCGTTT TGCTCTGTGGCCCCTCCGGG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKRARRGWFSLRGSPLARKIITFNLIALIILVSGILYLN SARQSLVYQRLGTLVSEAMLATDVLEVQLFEGGEAGVTPSAEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADA LNRLNDNEGGRTLITDTLKAIWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQVGAVPDSAGGTVYAATNPILQQ GQATGVLLMTSATGEIDRLVRIERERVLQMFIVALLVSIGLSLVLASTIANPLADLAEAAELGKDRDNDKVKPGRIRIPD LSARPDEIGRLSRALRGMVKALYNRIDSNEQFAADVAHEIKNPLASLQSAVGTLRMVHREDQREKLMEVIEHDVRRLDRL VSDISNASRLDAELVKEDEEDFDLLKMLGNLNQYLGEDARGKGIDYITELPNEPILIRGLEARLAQVFVNLITNAISFCE EGDAIRVWARRRDNRVLIVVEDTGPGIPEQALSKVFKRFYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEA DLTSEPLGARFVVGLPV
Sequences:
>Translated_577_residues MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKRARRGWFSLRGSPLARKIITFNLIALIILVSGILYLN SARQSLVYQRLGTLVSEAMLATDVLEVQLFEGGEAGVTPSAEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADA LNRLNDNEGGRTLITDTLKAIWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQVGAVPDSAGGTVYAATNPILQQ GQATGVLLMTSATGEIDRLVRIERERVLQMFIVALLVSIGLSLVLASTIANPLADLAEAAELGKDRDNDKVKPGRIRIPD LSARPDEIGRLSRALRGMVKALYNRIDSNEQFAADVAHEIKNPLASLQSAVGTLRMVHREDQREKLMEVIEHDVRRLDRL VSDISNASRLDAELVKEDEEDFDLLKMLGNLNQYLGEDARGKGIDYITELPNEPILIRGLEARLAQVFVNLITNAISFCE EGDAIRVWARRRDNRVLIVVEDTGPGIPEQALSKVFKRFYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEA DLTSEPLGARFVVGLPV >Mature_577_residues MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKRARRGWFSLRGSPLARKIITFNLIALIILVSGILYLN SARQSLVYQRLGTLVSEAMLATDVLEVQLFEGGEAGVTPSAEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADA LNRLNDNEGGRTLITDTLKAIWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQVGAVPDSAGGTVYAATNPILQQ GQATGVLLMTSATGEIDRLVRIERERVLQMFIVALLVSIGLSLVLASTIANPLADLAEAAELGKDRDNDKVKPGRIRIPD LSARPDEIGRLSRALRGMVKALYNRIDSNEQFAADVAHEIKNPLASLQSAVGTLRMVHREDQREKLMEVIEHDVRRLDRL VSDISNASRLDAELVKEDEEDFDLLKMLGNLNQYLGEDARGKGIDYITELPNEPILIRGLEARLAQVFVNLITNAISFCE EGDAIRVWARRRDNRVLIVVEDTGPGIPEQALSKVFKRFYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEA DLTSEPLGARFVVGLPV
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=29.5652173913043, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786783, Length=266, Percent_Identity=26.6917293233083, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790346, Length=315, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=26.5873015873016, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1790861, Length=335, Percent_Identity=26.5671641791045, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=29.8319327731092, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789403, Length=278, Percent_Identity=27.6978417266187, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1788549, Length=261, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI48994928, Length=207, Percent_Identity=28.5024154589372, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787374, Length=283, Percent_Identity=26.5017667844523, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786600, Length=200, Percent_Identity=29.5, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1789149, Length=218, Percent_Identity=29.8165137614679, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081816, Length=337, Percent_Identity=27.0029673590504, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790551, Length=296, Percent_Identity=28.0405405405405, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788279, Length=294, Percent_Identity=27.5510204081633, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=339, Percent_Identity=25.3687315634218, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=25.5230125523013, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63389; Mature: 63389
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKRARRGWFSLRGSPLARK CCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHH IITFNLIALIILVSGILYLNSARQSLVYQRLGTLVSEAMLATDVLEVQLFEGGEAGVTPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC AEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADALNRLNDNEGGRTLITDTLKA HHHHHHHHHCCEECCCCEEEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHH IWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQVGAVPDSAGGTVYAATNPILQQ HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHC GQATGVLLMTSATGEIDRLVRIERERVLQMFIVALLVSIGLSLVLASTIANPLADLAEAA CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELGKDRDNDKVKPGRIRIPDLSARPDEIGRLSRALRGMVKALYNRIDSNEQFAADVAHEI HHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KNPLASLQSAVGTLRMVHREDQREKLMEVIEHDVRRLDRLVSDISNASRLDAELVKEDEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DFDLLKMLGNLNQYLGEDARGKGIDYITELPNEPILIRGLEARLAQVFVNLITNAISFCE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH EGDAIRVWARRRDNRVLIVVEDTGPGIPEQALSKVFKRFYSQRPEEHFGNNSGLGLAISK CCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH QIVEAHGGVIWAENIRPTEADLTSEPLGARFVVGLPV HHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKRARRGWFSLRGSPLARK CCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHH IITFNLIALIILVSGILYLNSARQSLVYQRLGTLVSEAMLATDVLEVQLFEGGEAGVTPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC AEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADALNRLNDNEGGRTLITDTLKA HHHHHHHHHCCEECCCCEEEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHH IWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQVGAVPDSAGGTVYAATNPILQQ HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCHHHHC GQATGVLLMTSATGEIDRLVRIERERVLQMFIVALLVSIGLSLVLASTIANPLADLAEAA CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELGKDRDNDKVKPGRIRIPDLSARPDEIGRLSRALRGMVKALYNRIDSNEQFAADVAHEI HHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KNPLASLQSAVGTLRMVHREDQREKLMEVIEHDVRRLDRLVSDISNASRLDAELVKEDEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DFDLLKMLGNLNQYLGEDARGKGIDYITELPNEPILIRGLEARLAQVFVNLITNAISFCE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH EGDAIRVWARRRDNRVLIVVEDTGPGIPEQALSKVFKRFYSQRPEEHFGNNSGLGLAISK CCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHH QIVEAHGGVIWAENIRPTEADLTSEPLGARFVVGLPV HHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194 [H]