| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082275
Identifier: 99082275
GI number: 99082275
Start: 2576659
End: 2577612
Strand: Reverse
Name: 99082275
Synonym: TM1040_2435
Alternate gene names: NA
Gene position: 2577612-2576659 (Counterclockwise)
Preceding gene: 99082276
Following gene: 99082271
Centisome position: 80.53
GC content: 58.49
Gene sequence:
>954_bases TTGGCGAAGGCTACTAATCTGGCGGAACGGTCCAAAATGACGGGACGGGTGAAAGTGGCTGACACCGCGCATGACAACAA CTCTGGCATGACATCGCAAGACCCCCAGGAGGGAGGTTCCGGCGAGATTTACGACCGGCGTACTTTGACCTATGCGAACT CCTTTGACGACCGCTGGACGTCTTTGGCGATCCGGACCCTGGAATGGTTGACAGGCAAGTTTACGATCCTGCGGATGGTG TCAAAATTCGAGGCCCGTAACGCCGACTACCGGGGCAACAAATTCTGGCGTGGGGCCCTCGATGTGATGGGCATCGAGCT CAAGACCCCCGAAGAACAGATCAATAATATCCCTGAAACCGGCCCGGTCGTCGTGGTTGCAAACCATCCCCATGGCATGG TGGACGGCATGATCTTTGCGGATCTTATTGGGCGGCGACGTTTGGACTATCGTATTCTGACCCGATCGGTACTGACCGGC CTCGATGAAGCCGCGACCTCATTCATGATCCCAGTGCCGTTCCCGCACGATCCAGACGCACAGCGCAAGATGGTGGAGAT GCGGGCCAAGGCGATGGCACACCTCAAAGATGGGGGGGTTGTTGCTCTGTTTCCCTCGGGTGTTGTGATGTCTTCCGACA GCTGGTGGGGACCGGCGGTGGAGCGCGAATGGAATGTGTTCACCGCGCAGCTTATTCGCCGGTCTGGCGCAAAGGTTGTG CCGATGTTCTTCCCGGGCCGAAACTCTCGCGCCTATCAGATTGCCTGCCAGATCTCACCTATCCTGCGCCAAGGGCTGCT GCTGCACGAGATCGTGCGTTCCTGCAACAAACCGCAGGCCCCTGTTGTCGGAGAGCCCTTGACGGATGCGCAGATGGAGC GCCTGCACAGCGACCCGCGTGGTTTTATGGCATGGCTGCGCGAGCATACTCTGAACCTCGGTTCAAAGCGCTGA
Upstream 100 bases:
>100_bases ATGTTGGCAGCGTCGAAGGGAACGACTATTGACGTCGAAACTTCTGGACCTGATGCTGAAGCGCTGGCCTCCGCCGTCGA AGCCTTGGTGGCTGACAAGT
Downstream 100 bases:
>100_bases CACCGACGACTTCTCCTGCGGGTATCTGCTAGGCTACGAGCGCCGATCTTGGCGCCAATGAAGCAGCGGCCGCGTCCTTT GGTCTTCGCGTCCGAAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMV SKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTG LDEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR
Sequences:
>Translated_317_residues MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMV SKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTG LDEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR >Mature_316_residues AKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMVS KFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGL DEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVVP MFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35563; Mature: 35432
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWT CCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCHHHH SLAIRTLEWLTGKFTILRMVSKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPET HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHEEEEEECCHHHHCCCCCC GPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGLDEAATSFMIPVPFPHDPDA CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH QRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV HHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEE PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPR EEEECCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH GFMAWLREHTLNLGSKR HHHHHHHHHHHCCCCCC >Mature Secondary Structure AKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWT CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCHHHH SLAIRTLEWLTGKFTILRMVSKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPET HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHEEEEEECCHHHHCCCCCC GPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGLDEAATSFMIPVPFPHDPDA CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH QRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV HHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEE PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPR EEEECCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH GFMAWLREHTLNLGSKR HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA