Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082275

Identifier: 99082275

GI number: 99082275

Start: 2576659

End: 2577612

Strand: Reverse

Name: 99082275

Synonym: TM1040_2435

Alternate gene names: NA

Gene position: 2577612-2576659 (Counterclockwise)

Preceding gene: 99082276

Following gene: 99082271

Centisome position: 80.53

GC content: 58.49

Gene sequence:

>954_bases
TTGGCGAAGGCTACTAATCTGGCGGAACGGTCCAAAATGACGGGACGGGTGAAAGTGGCTGACACCGCGCATGACAACAA
CTCTGGCATGACATCGCAAGACCCCCAGGAGGGAGGTTCCGGCGAGATTTACGACCGGCGTACTTTGACCTATGCGAACT
CCTTTGACGACCGCTGGACGTCTTTGGCGATCCGGACCCTGGAATGGTTGACAGGCAAGTTTACGATCCTGCGGATGGTG
TCAAAATTCGAGGCCCGTAACGCCGACTACCGGGGCAACAAATTCTGGCGTGGGGCCCTCGATGTGATGGGCATCGAGCT
CAAGACCCCCGAAGAACAGATCAATAATATCCCTGAAACCGGCCCGGTCGTCGTGGTTGCAAACCATCCCCATGGCATGG
TGGACGGCATGATCTTTGCGGATCTTATTGGGCGGCGACGTTTGGACTATCGTATTCTGACCCGATCGGTACTGACCGGC
CTCGATGAAGCCGCGACCTCATTCATGATCCCAGTGCCGTTCCCGCACGATCCAGACGCACAGCGCAAGATGGTGGAGAT
GCGGGCCAAGGCGATGGCACACCTCAAAGATGGGGGGGTTGTTGCTCTGTTTCCCTCGGGTGTTGTGATGTCTTCCGACA
GCTGGTGGGGACCGGCGGTGGAGCGCGAATGGAATGTGTTCACCGCGCAGCTTATTCGCCGGTCTGGCGCAAAGGTTGTG
CCGATGTTCTTCCCGGGCCGAAACTCTCGCGCCTATCAGATTGCCTGCCAGATCTCACCTATCCTGCGCCAAGGGCTGCT
GCTGCACGAGATCGTGCGTTCCTGCAACAAACCGCAGGCCCCTGTTGTCGGAGAGCCCTTGACGGATGCGCAGATGGAGC
GCCTGCACAGCGACCCGCGTGGTTTTATGGCATGGCTGCGCGAGCATACTCTGAACCTCGGTTCAAAGCGCTGA

Upstream 100 bases:

>100_bases
ATGTTGGCAGCGTCGAAGGGAACGACTATTGACGTCGAAACTTCTGGACCTGATGCTGAAGCGCTGGCCTCCGCCGTCGA
AGCCTTGGTGGCTGACAAGT

Downstream 100 bases:

>100_bases
CACCGACGACTTCTCCTGCGGGTATCTGCTAGGCTACGAGCGCCGATCTTGGCGCCAATGAAGCAGCGGCCGCGTCCTTT
GGTCTTCGCGTCCGAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMV
SKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTG
LDEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV
PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR

Sequences:

>Translated_317_residues
MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMV
SKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTG
LDEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV
PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR
>Mature_316_residues
AKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMVS
KFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGL
DEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVVP
MFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR

Specific function: Unknown

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35563; Mature: 35432

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWT
CCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCHHHH
SLAIRTLEWLTGKFTILRMVSKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHEEEEEECCHHHHCCCCCC
GPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGLDEAATSFMIPVPFPHDPDA
CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
QRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV
HHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEE
PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPR
EEEECCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH
GFMAWLREHTLNLGSKR
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKATNLAERSKMTGRVKVADTAHDNNSGMTSQDPQEGGSGEIYDRRTLTYANSFDDRWT
CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCHHHH
SLAIRTLEWLTGKFTILRMVSKFEARNADYRGNKFWRGALDVMGIELKTPEEQINNIPET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHEEEEEECCHHHHCCCCCC
GPVVVVANHPHGMVDGMIFADLIGRRRLDYRILTRSVLTGLDEAATSFMIPVPFPHDPDA
CCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHH
QRKMVEMRAKAMAHLKDGGVVALFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVV
HHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEE
PMFFPGRNSRAYQIACQISPILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPR
EEEECCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH
GFMAWLREHTLNLGSKR
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA