Click here to switch to the map view.

The map label for this gene is 99082256

Identifier: 99082256

GI number: 99082256

Start: 2556474

End: 2558207

Strand: Direct

Name: 99082256

Synonym: TM1040_2416

Alternate gene names: NA

Gene position: 2556474-2558207 (Clockwise)

Preceding gene: 99082253

Following gene: 99082257

Centisome position: 79.87

GC content: 60.03

Gene sequence:

>1734_bases
ATGCGGAAGTATCTTTTGACCGCAGTTGCAGCCGGGGCTGTAATTGCGGCAACGGGTTCGTATGCCGATGAGGCAGCGGC
CCAGAAATGGATCGACGAGGAGTTTCAGCCGTCGGTTCTGAGCAAAGCAGAACAACTTGCCGAGATGCAGTGGTTCATCA
ACGCCGCCGAGCCTTACAAGGGCATGGAGATCAACGTACTGTCCGAGGGCATCCCCACGCACAGCTACGAATCCGAGGTG
CTGACCAAGGCGTTTGAGGAAATCACCGGCATCAAGGTGAACCACCAGATCCTGGGCGAAGGCGAGGTCGTTCAGGCCGT
GCAGACCCAGATGCAGACCAAGCGGAACCTCTATGACGCATACGTCAACGACTCCGACCTGATCGGCACGCACTCGCGCC
TGCAGCTCGCTTACAACCTGAGCGACATGATGGAAGGCGACTTCAAGGATGTGACCAACCCCGGTCTCGACCTTGACGAT
TTCATGGGCACCCAGTTCACCACTGGCCCCGATGGCGACCTCTACCAGCTGCCCGACCAGCAGTTTGCGAACCTCTACTG
GTTCCGCAAAGATTGGTTCGACCGCGAAGATCTGAAGGCCGCCTTCAAAGAGAAATACGGCTACGAGCTGGGTGTTCCGG
TCAACTGGTCCGCCTATGAAGACATTGCCGAGTTCTTCTCTGAAGATGTGAAAGAAATCGACGGCACCACCATCTACGGC
CACATGGATTACGGCAAACGCGCGCCTGACCTCGGCTGGCGGATGACCGATGCGTGGCTCTCCATGGCCGGTGCGGGCTC
CAAGGGTGAGCCGAACGGTGTTCCGATCGACGAATGGGGCATCCGTATGGAAGAAGGCACCTGTAACCCGGTGGGCGCAA
GCGTCACCCGCGGCGGTGCTGCAAACGGTCCGGCAGCAGTCTATGCGATCCGCAAGTGGGACGAATGGCTGCGCAAATAC
GCACCTCCCGGTGCCGCGTCTTATGACTTCTACCAGTCTCTGCCCGCACTCGCTCAAGGCAACGTCGCGCAGCAGATCTT
CTGGTACACCGCCTTTACCGCAGACATGGTGAAGCCGAAGTCCGAAGGCAACAACACCGTCGACGACAGCGGCACCCCGC
TGTGGCGCATGGCACCGAGCCCGCATGGCCCCTACTGGGAAGAAGGCCAGAAGGTTGGCTATCAGGACGTGGGCTCCTGG
ACCTTCCTCAACTCCACCCCGCTGGACCGCGCACAAGCCGCATGGCTCTATGCTCAGTTCGTCGTCTCCAAGACCGTCGA
CGTGAAGAAGTCCCACGTGGGTCTGACCTTCATTCGCGACAGCTCCGTCAACCACGAGAGCTTCACCGAGCGTGCGCCCA
AACTGGGTGGTCTGGTGGAATTCTACCGTTCGCCCGACCGGACTGCATGGTCCCCGACCGGCATCAACGTGCCTGACTAT
CCCAAGCTGGCGCAGATCTGGTGGCAGCAGATTGGTGACGTGAACTCCGGTGCCTTCACCCCGCAAGAAGCGATGGATCG
TCTGGCGCAGGAAATGGACATCACCATGGGTCGTATGCAGCGTGCAGACGAGCAGGCGAATGTCTATGGCGGCTGCGGCC
CGCGTCTGAACGAAGAAAAAGACGCGGAGTGGTGGTACGCCAATGGCGGCGCCAAGCCGAAGCTGGAGAACGAAAAGCCG
CAAGGCCAGACCGTCAACTATGACGAGCTGGTGGCGCGCTGGGCCGCGAACTGA

Upstream 100 bases:

>100_bases
TACTAAATAATTAGTTTGACATCACGGCTGGCTCGGTGAAATCCTTTAGGCCAGTCAGATGGGCAAAACATCTGACCTTG
CAGACTTTAGGGAGGAAAAG

Downstream 100 bases:

>100_bases
TCGCGCCTCACTCTCCCCGGGGATCTCTCCCCTGACGTGCCGGGCCTGATCTCACCTTGATCCGGGCCCGGCCCCACCTG
CCCCGGCTGATTGGCCTGCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYKGMEINVLSEGIPTHSYESEV
LTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDAYVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDD
FMGTQFTTGPDGDLYQLPDQQFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGAANGPAAVYAIRKWDEWLRKY
APPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPKSEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSW
TFLNSTPLDRAQAAWLYAQFVVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEKDAEWWYANGGAKPKLENEKP
QGQTVNYDELVARWAAN

Sequences:

>Translated_577_residues
MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYKGMEINVLSEGIPTHSYESEV
LTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDAYVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDD
FMGTQFTTGPDGDLYQLPDQQFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGAANGPAAVYAIRKWDEWLRKY
APPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPKSEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSW
TFLNSTPLDRAQAAWLYAQFVVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEKDAEWWYANGGAKPKLENEKP
QGQTVNYDELVARWAAN
>Mature_577_residues
MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYKGMEINVLSEGIPTHSYESEV
LTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDAYVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDD
FMGTQFTTGPDGDLYQLPDQQFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGAANGPAAVYAIRKWDEWLRKY
APPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPKSEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSW
TFLNSTPLDRAQAAWLYAQFVVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEKDAEWWYANGGAKPKLENEKP
QGQTVNYDELVARWAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64551; Mature: 64551

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYK
CCHHHHHHHHHCEEEEECCCCHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHCCCCCC
GMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEECCEECCCCHHHHHHHHHHHHHHHHHHH
YVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDDFMGTQFTTGPDGDLYQLPDQ
HCCCCCCCCCHHHEEEEECHHHHHCCCHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCH
QFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGA
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCEECCCCCCCCCCCCCCCCC
ANGPAAVYAIRKWDEWLRKYAPPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPK
CCCCHHEEEHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCC
SEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSWTFLNSTPLDRAQAAWLYAQF
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCHHHHHHHHHHHH
VVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DAEWWYANGGAKPKLENEKPQGQTVNYDELVARWAAN
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYK
CCHHHHHHHHHCEEEEECCCCHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHCCCCCC
GMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEECCEECCCCHHHHHHHHHHHHHHHHHHH
YVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDDFMGTQFTTGPDGDLYQLPDQ
HCCCCCCCCCHHHEEEEECHHHHHCCCHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCH
QFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGA
ECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCEECCCCCCCCCCCCCCCCC
ANGPAAVYAIRKWDEWLRKYAPPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPK
CCCCHHEEEHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCC
SEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSWTFLNSTPLDRAQAAWLYAQF
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCHHHHHHHHHHHH
VVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DAEWWYANGGAKPKLENEKPQGQTVNYDELVARWAAN
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA