| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082197
Identifier: 99082197
GI number: 99082197
Start: 2478269
End: 2478574
Strand: Reverse
Name: 99082197
Synonym: TM1040_2357
Alternate gene names: NA
Gene position: 2478574-2478269 (Counterclockwise)
Preceding gene: 99082198
Following gene: 99082196
Centisome position: 77.43
GC content: 58.82
Gene sequence:
>306_bases ATGACCCACCGCAAACCGCCGCAAGACTGTGTAGATATGACCGAGCTGCGTCAGGCGATCGACGCCATCGACGTGGAGCT GGTAAAGCTGCTTCGGGCACGCGTTGACTACATCGACCGTGCCGTAACCCTGAAACAGGCAAACGGATGGCCCGCGCGCA TCCAGTCCCGGGTTGAAGAGGTGGTTTCCAATGCGTGTCAGACCGCCGATGAGGAAGGTCTCGATACGGAACTGGTGGAG CGCATCTGGCGCGATATGGTGGATTGGTCGATTTCGCGGGAAGCGCGTGAAATCCCCGAGATTTGA
Upstream 100 bases:
>100_bases TCAATGAAGAGGGCCTGATCGAAGGCTTGTTCTAAGGCACGAAATCGGCAATCTGCGGCCCGGGGCATATGCCTCGGGCC GTAGGAGTTTTGATAGAGAG
Downstream 100 bases:
>100_bases GCCGACTCACAATCGAGTTCGGCCCCCTGAGAAGGATAGATACGATGGCAGCAGAAATCATTGACGGGAAGGCCTTTGCG GCCAAGGTCCGCGGTCAGGT
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase; T-Protein; Chorismate Mutase ; Salicylate Biosynthesis Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTHRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTLKQANGWPARIQSRVEEVVSNACQTADEEGLDTELVE RIWRDMVDWSISREAREIPEI
Sequences:
>Translated_101_residues MTHRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTLKQANGWPARIQSRVEEVVSNACQTADEEGLDTELVE RIWRDMVDWSISREAREIPEI >Mature_100_residues THRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTLKQANGWPARIQSRVEEVVSNACQTADEEGLDTELVER IWRDMVDWSISREAREIPEI
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11704; Mature: 11573
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTLKQANGWPARIQSRVEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VVSNACQTADEEGLDTELVERIWRDMVDWSISREAREIPEI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure THRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTLKQANGWPARIQSRVEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VVSNACQTADEEGLDTELVERIWRDMVDWSISREAREIPEI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA