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The map label for this gene is 99082171

Identifier: 99082171

GI number: 99082171

Start: 2451716

End: 2452378

Strand: Reverse

Name: 99082171

Synonym: TM1040_2331

Alternate gene names: NA

Gene position: 2452378-2451716 (Counterclockwise)

Preceding gene: 99082172

Following gene: 99082170

Centisome position: 76.61

GC content: 62.44

Gene sequence:

>663_bases
ATGCGACGCGTGATCTTTCTTGGGGTGGTAGGGGGCTTGGGCTTTGTGGCGCTGGTCTCGTTGGGCCTCTGGCAGCTACA
ACGGCTGGCGTGGAAAGAGGGCGTCCTCGCCACCATCGAGACACGCATCGCAGCAGAGCCGGTCTCCTTGCCCGAGGCTC
CAGACCCCGAGGCGGACCGCTACCGTGCGGTGCGATTTGAGGGTGAGATCCTACCCGAGGAGCTACATGTCTTCTGGGTC
ACAGAGGCCGAGGGGGCAGGCTATCGCGTGATCTCTCCCTTTGTGACGGACGAGGGTCGCCGCATCCTTGTGGATCGCGG
CTACATCCGGGCCACGGACAAGGAAAATACCCGCCCCACGGGCCGCGCAGAGCTTACCGGAAATCTCCTCTGGCCGGATG
AAGGCGACTGGACCACTCCGCCGCCTGAAGTGGACACCAACATCCTCTACGCCCGCGACATTGCCTATATGTCCGAGCGC
CTGAACACTGAACCCTTGCTGGTTGTGGTGCGCACGGGGGCCGAAAAACCCACGCCTCTGCCTGTCTCGACCAAGGGCAT
CCCGAACGATCATCTGCAATATGTCATCACCTGGTTCTCGCTCGCCCTCATATGGGCGGCCATGACCGCCGCCTTTCTCT
TGCGTACGCGCGCCAAAACCTGA

Upstream 100 bases:

>100_bases
TATCTAACGGGGCGCGCGGGGATCACCTCGCGCGCCTCTTGCCTGTTTTGCGGCAGGCCTTTGGGGCGCAGATTGCAATC
GGATCTGGAGGGGTCGTTTG

Downstream 100 bases:

>100_bases
CAGGAACTGACGCCATGAAATATATCTCCACCCGCGGCCAAGCGCCCGAACTCACCTTCGAAGAAGCCATGCTGACCGGG
CTTGCGCGCGACGGCGGGCT

Product: SURF1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIAAEPVSLPEAPDPEADRYRAVRFEGEILPEELHVFWV
TEAEGAGYRVISPFVTDEGRRILVDRGYIRATDKENTRPTGRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSER
LNTEPLLVVVRTGAEKPTPLPVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRAKT

Sequences:

>Translated_220_residues
MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIAAEPVSLPEAPDPEADRYRAVRFEGEILPEELHVFWV
TEAEGAGYRVISPFVTDEGRRILVDRGYIRATDKENTRPTGRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSER
LNTEPLLVVVRTGAEKPTPLPVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRAKT
>Mature_220_residues
MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIAAEPVSLPEAPDPEADRYRAVRFEGEILPEELHVFWV
TEAEGAGYRVISPFVTDEGRRILVDRGYIRATDKENTRPTGRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSER
LNTEPLLVVVRTGAEKPTPLPVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRAKT

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=212, Percent_Identity=29.2452830188679, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321550, Length=112, Percent_Identity=34.8214285714286, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 24640; Mature: 24640

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIAAEPVSLPEAPDPEADR
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCC
YRAVRFEGEILPEELHVFWVTEAEGAGYRVISPFVTDEGRRILVDRGYIRATDKENTRPT
EEEEEECCCCCCCEEEEEEEEECCCCCEEEECCEECCCCCEEEEECCEEEECCCCCCCCC
GRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSERLNTEPLLVVVRTGAEKPTPL
CCEEEECCEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRAKT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIAAEPVSLPEAPDPEADR
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCC
YRAVRFEGEILPEELHVFWVTEAEGAGYRVISPFVTDEGRRILVDRGYIRATDKENTRPT
EEEEEECCCCCCCEEEEEEEEECCCCCEEEECCEECCCCCEEEEECCEEEECCCCCCCCC
GRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSERLNTEPLLVVVRTGAEKPTPL
CCEEEECCEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRAKT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA