| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081913
Identifier: 99081913
GI number: 99081913
Start: 2176578
End: 2177414
Strand: Reverse
Name: 99081913
Synonym: TM1040_2073
Alternate gene names: NA
Gene position: 2177414-2176578 (Counterclockwise)
Preceding gene: 99081914
Following gene: 99081909
Centisome position: 68.02
GC content: 66.55
Gene sequence:
>837_bases GTGAGCCTCGATCTGAGCGCGCTGCCGCAAGAGGTCTATCACCGAAAGTTTGGCACCGGGGCGCGTCATCTGGTGGCGGT GCATTGCTCGCTGGCGCATTCGGGGGCCTGGCGGGGGCTTGTTGGGGCCTTGGGCGAGGACCGTGTCAGCTGCACCGCAT TTGACATGCTCTCGCACGGCAAGAGCCCGGATTGGGACGGGCAGGGCCTGTTGCAGCGTCGCAATGCCGAGGCCGGGCTG TGTCTCTTGGAGGCGGAGGTGGCAGAGACGGGTGGGCCGGTTGACTTGATCGGGCATTCCTTCGGGGCGACGGTGGCGCT GGCCATGGCCGAGATGCGCCCGGACCTGGTGCGGAGCCTCGTGATGATCGAGCCGGTGCTTTTTGCTGCCGCCAAGGTGC AGAACCCGGACGCGCTCGAGCAGATGCGTTCCGATCACATGGCGGTGCGGAGCCCCTATGCGGCGGGCGATGTGGAATAT GCCACCCGGCTCTTTAACCGGGCCTGGGGAACGGGCCATCCGAAATGGCCGGATCTGCCAGAGCATGCCCGCGCCGCCAT GGTGCGATCGTTTCCGGCGGTGATGGACTGTGACAGCCAGGTCTATGACGATGCGGCCGGGCTGCTTGCGCCGGGTGCGC TCGAGGCGCTCGAGATGCCGGTGCTGGTGATGCAGGGCGGTGCGACGCAGCCCATCATGACCGCGGTTACCGACGCGCTG TCGGCGCGGATGCCAGAGGCGCAGATCAGCGTCATCAAGGGCGCAGGCCATATGGTGCCGGTGACACATCCCGAAGCGGT GGCCGAGGTGTTGCGGGCGTTCTGGTCTCAGAGATAA
Upstream 100 bases:
>100_bases ATGTCTTTGGCGCGCCGTTTTATGTCACATCCGACGGGGCGAAGTTCTGGGGGCAGGATCGTCTGGTTGATCTTGACGAG CATCTTGCGGGGCAGGGCGC
Downstream 100 bases:
>100_bases GCCAGTGCTGATCGGCTCTGGGGTCGGTCAGCGCTCTCCGGGCGTATCCTTAGACCGGTTCCTCGATAATGTAGTCTTCC CATTCCTCCAGCGGCGTGTC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGALGEDRVSCTAFDMLSHGKSPDWDGQGLLQRRNAEAGL CLLEAEVAETGGPVDLIGHSFGATVALAMAEMRPDLVRSLVMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEY ATRLFNRAWGTGHPKWPDLPEHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALEMPVLVMQGGATQPIMTAVTDAL SARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWSQR
Sequences:
>Translated_278_residues MSLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGALGEDRVSCTAFDMLSHGKSPDWDGQGLLQRRNAEAGL CLLEAEVAETGGPVDLIGHSFGATVALAMAEMRPDLVRSLVMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEY ATRLFNRAWGTGHPKWPDLPEHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALEMPVLVMQGGATQPIMTAVTDAL SARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWSQR >Mature_277_residues SLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGALGEDRVSCTAFDMLSHGKSPDWDGQGLLQRRNAEAGLC LLEAEVAETGGPVDLIGHSFGATVALAMAEMRPDLVRSLVMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEYA TRLFNRAWGTGHPKWPDLPEHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALEMPVLVMQGGATQPIMTAVTDALS ARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWSQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29782; Mature: 29651
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00626 RCC1_2 ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGALGEDRVSCTAFDMLSHG CCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCC KSPDWDGQGLLQRRNAEAGLCLLEAEVAETGGPVDLIGHSFGATVALAMAEMRPDLVRSL CCCCCCCCHHHHHCCCCCCEEEEEHHHHHCCCCHHHHHCHHHHHHHHHHHHHCHHHHHHH VMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEYATRLFNRAWGTGHPKWPDLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH EHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALEMPVLVMQGGATQPIMTAVTDAL HHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHH SARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWSQR HHCCCHHHHHHEECCCCEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGALGEDRVSCTAFDMLSHG CCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCC KSPDWDGQGLLQRRNAEAGLCLLEAEVAETGGPVDLIGHSFGATVALAMAEMRPDLVRSL CCCCCCCCHHHHHCCCCCCEEEEEHHHHHCCCCHHHHHCHHHHHHHHHHHHHCHHHHHHH VMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEYATRLFNRAWGTGHPKWPDLP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH EHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALEMPVLVMQGGATQPIMTAVTDAL HHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHH SARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWSQR HHCCCHHHHHHEECCCCEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA