Click here to switch to the map view.

The map label for this gene is 99081825

Identifier: 99081825

GI number: 99081825

Start: 2090043

End: 2090789

Strand: Direct

Name: 99081825

Synonym: TM1040_1985

Alternate gene names: NA

Gene position: 2090043-2090789 (Clockwise)

Preceding gene: 99081824

Following gene: 99081826

Centisome position: 65.29

GC content: 63.32

Gene sequence:

>747_bases
ATGGCCGACCGCCGCATCCTGCGCCTTGAGGGCCCAGACACCCGCAGTTTCTTGCAGGGCTTGGTCAGCAATGATGTCAA
CAAGGTACAGGACGGTCTTGTCTATGCAGCCATCCTGACGCCCCAGGGCAAATATCTTGCGGATTTCTTCCTTGCGGCGG
ATGGGGACGCAGTTCTCCTGGATGTGGCAGAGGCGCTGGCGGATGATCTCGTGAAGCGGCTCAAGATGTATAAGCTACGC
GCCAATGTGACCCTTGAGGAGACCGACCTCAAGCTGCGCCGCGGCACCGGGGACGCCCCCGAGGGGGCCCTGCCCGACCC
CCGCCATCCTGCGCTTGGATGGCGCCAGTATGGCAAAGAGACGTTTGACGATGGCAGCGACTGGGACGTGATCCGGGTGA
CGCATGTGATCCCCGAAACCGGCATCGAACTCACGCCCGACAGCTATCTCCTCGAGGTGGGGTTTGAGCGGCTGAACGGC
GTCGATTTTCGCAAGGGATGCTATGTCGGCCAAGAGGTCACCGCACGCATGAAGCACAAGACCGAGTTGCGCAAAGGCCT
GACACAGGTGGAGATCGACGGCACCGTCCCGGTGGGCGCACAGATCACCGCTGGCGGCAAAGCCGTGGGTCAGGTTTTTA
CGCAATCGGGCGGAAAGGCGATCGCCTACCTGCGCTTTGATCGCGCCAAGGGCGCGCTCGAGGCCGAAGGCACCGCGCTG
CGCTGGCCCGAGGCGCCCGCCGAGTGA

Upstream 100 bases:

>100_bases
AGGATCGGGGGCGACCGAGTCTGCATCTCCCCGGCTTGAATTCCGCGGCTCAGAGGGGCATCTTCTGCCCTCACACATCC
AGTCTTGAAGGGAGACATCC

Downstream 100 bases:

>100_bases
GGCAATTGCTTAACCCTTGCGCTCTACCTTCGCGGGATCGACTATAAAATAGAACCCGCAAGACCGTCGCGCCCAGAAGC
GCACGCCTGCGCGGATCACA

Product: glycine cleavage T protein (aminomethyl transferase)

Products: NA

Alternate protein names: Aminomethyltransferase; Aminomethyl Transferase Family Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Aminomethyltransferase Protein; Glycine Cleavage T-Protein; Aminomethyltransferase Family Protein; Glycine Cleavage T-Protein Barrel; Glycine Cleavage T-Protein C-Terminal Barrel; Aminomethyl Transferase; Aminomethyltransferase Related GcvT

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGKYLADFFLAADGDAVLLDVAEALADDLVKRLKMYKLR
ANVTLEETDLKLRRGTGDAPEGALPDPRHPALGWRQYGKETFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNG
VDFRKGCYVGQEVTARMKHKTELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYLRFDRAKGALEAEGTAL
RWPEAPAE

Sequences:

>Translated_248_residues
MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGKYLADFFLAADGDAVLLDVAEALADDLVKRLKMYKLR
ANVTLEETDLKLRRGTGDAPEGALPDPRHPALGWRQYGKETFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNG
VDFRKGCYVGQEVTARMKHKTELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYLRFDRAKGALEAEGTAL
RWPEAPAE
>Mature_247_residues
ADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGKYLADFFLAADGDAVLLDVAEALADDLVKRLKMYKLRA
NVTLEETDLKLRRGTGDAPEGALPDPRHPALGWRQYGKETFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNGV
DFRKGCYVGQEVTARMKHKTELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYLRFDRAKGALEAEGTALR
WPEAPAE

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=277, Percent_Identity=28.8808664259928, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71985951, Length=255, Percent_Identity=30.5882352941176, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24645123, Length=269, Percent_Identity=27.1375464684015, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27141; Mature: 27010

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGKYLADFFLAADGDAVLL
CCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCEEEEEEECCCCCCEEHEEEECCCCCHHH
DVAEALADDLVKRLKMYKLRANVTLEETDLKLRRGTGDAPEGALPDPRHPALGWRQYGKE
HHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCH
TFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNGVDFRKGCYVGQEVTARMKHK
HCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
TELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYLRFDRAKGALEAEGTAL
HHHHCCCEEEEECCCCCCCCEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEE
RWPEAPAE
ECCCCCCC
>Mature Secondary Structure 
ADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGKYLADFFLAADGDAVLL
CCCEEEEECCCCHHHHHHHHHHCCHHHHHCCEEEEEEECCCCCCEEHEEEECCCCCHHH
DVAEALADDLVKRLKMYKLRANVTLEETDLKLRRGTGDAPEGALPDPRHPALGWRQYGKE
HHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCH
TFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNGVDFRKGCYVGQEVTARMKHK
HCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
TELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGGKAIAYLRFDRAKGALEAEGTAL
HHHHCCCEEEEECCCCCCCCEEECCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEE
RWPEAPAE
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA