Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081814

Identifier: 99081814

GI number: 99081814

Start: 2079396

End: 2079827

Strand: Direct

Name: 99081814

Synonym: TM1040_1974

Alternate gene names: NA

Gene position: 2079396-2079827 (Clockwise)

Preceding gene: 99081813

Following gene: 99081815

Centisome position: 64.96

GC content: 57.64

Gene sequence:

>432_bases
ATGCCAGAACCGGGCACCATAACGAGCAAAGAGCCCCGCGAAGAATTTCCGGTGATCGGAACCGAAGAGGTCCCCGCGGT
ATTTTTTGACGGGGACAAGCTGCTCTTGTGTTACGAGGTCGCCGCCATCGAGGGCGGGGGCCTTGCGATTCTCGAATTCG
ACGAGGTGCTCGATTTTCGGGTGGATCCAATGAATGTGGACGAACTCTCTGACTCGCCCTACCCCGTCTCGGCCTGGAAT
ATGACCGAAATCTGCGGCAGCGAGAAAGCCGCACGCTGGGCGGCAATGGATGCGCGTTACTGGAGCATCTCTTTCACCGA
TATGACCCTCACCATCCTGTTTGACACCGTTCGACTGGCCGGGCGCAGCCGTGAAAAACGCCTGCCGCATGAGGCCTTGA
AACATTTTATCGGCTCTTCTCTGGCCGCCTAA

Upstream 100 bases:

>100_bases
GGCGCGCCTGTTTCGTTAGCAATTTATCAGCCGGTTTCTCTTATGCTCCTGAGTCGAAGTGACGACCAAACGCGGCACAG
AATGGCCGCTGGAGACGACG

Downstream 100 bases:

>100_bases
AGCCACGCCATGCCCCTCAGCCCGCGGGCGGAATGGGCTTGGCGCAACCCCATAGTTGCGCTAGCGTCGCGCCATGATCC
GCGCATTTCGATCCCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIEGGGLAILEFDEVLDFRVDPMNVDELSDSPYPVSAWN
MTEICGSEKAARWAAMDARYWSISFTDMTLTILFDTVRLAGRSREKRLPHEALKHFIGSSLAA

Sequences:

>Translated_143_residues
MPEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIEGGGLAILEFDEVLDFRVDPMNVDELSDSPYPVSAWN
MTEICGSEKAARWAAMDARYWSISFTDMTLTILFDTVRLAGRSREKRLPHEALKHFIGSSLAA
>Mature_142_residues
PEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIEGGGLAILEFDEVLDFRVDPMNVDELSDSPYPVSAWNM
TEICGSEKAARWAAMDARYWSISFTDMTLTILFDTVRLAGRSREKRLPHEALKHFIGSSLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15917; Mature: 15786

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIEGGGLAILEFDEVLDFR
CCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCEEEEEECHHHHEE
VDPMNVDELSDSPYPVSAWNMTEICGSEKAARWAAMDARYWSISFTDMTLTILFDTVRLA
CCCCCHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCEEEEHHHHHHHHH
GRSREKRLPHEALKHFIGSSLAA
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIEGGGLAILEFDEVLDFR
CCCCCCCCCCCHHHCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCEEEEEECHHHHEE
VDPMNVDELSDSPYPVSAWNMTEICGSEKAARWAAMDARYWSISFTDMTLTILFDTVRLA
CCCCCHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEEEEECCEEEEHHHHHHHHH
GRSREKRLPHEALKHFIGSSLAA
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA