| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081755
Identifier: 99081755
GI number: 99081755
Start: 2015909
End: 2016448
Strand: Direct
Name: 99081755
Synonym: TM1040_1914
Alternate gene names: NA
Gene position: 2015909-2016448 (Clockwise)
Preceding gene: 99081754
Following gene: 99081761
Centisome position: 62.98
GC content: 62.59
Gene sequence:
>540_bases ATGAAAATTGAACCGATTGGCCCGGATCGGGCCGTGCGTCTTGTTCCGCTGCTCGAGGATCTGCATGCGGTGCATGTCGC GCATCACAGGGACCGATACACACCGAACCCTGATCCAGCGCATCTCTCAGTGTGGCTCTCGGAGTGGCTCGCAGAGCCCA ATGTCCACGCGCTTGCGGCCATAAGCCCGCAGGAGGCGCTGATGGGCTATCTGATCTATGACATCGAAAAGCGCCCGGCC CTGCCCGTGCGCCCGGCTGAGACGCGTGCCATGCTGCATCACATCGCCGTCGCCGCGCCATTGCGCGGTATCGGTGTGGG CAAAGCCCTAATGACCCAGATGAAAGAAGACGCGCTGGCCAAGGGCGCGGATGTGATCGGCGTCACCTATGCGCCCTTCA ACGCGGCCTCAGCCGCGCTGATGCGCCACTTTGGGCTGGAGCCGGTGATGACCATGGCAGAATGGCGCAGACCCTCTGAT GAGGCCTCTCAGGAGCCCTCTCAGCCGACATCCGAGACATCGCCGCAGGAAGCGATATAG
Upstream 100 bases:
>100_bases CATCTTCCCAACTTGCAGACAGACGGGGCGGATCACATCGATCCGCCCCTTTTCTTTTTTCCGACCCCCGATTTTATTCT GACGTTCCAAGGACTCCACG
Downstream 100 bases:
>100_bases CCTGCTGAAAGTCGGGGTAAAACGCCCCAGACAGGGGAGATACGGGCGAGGAGGAGATACGGCAGAGGAGGACTGCGCCA CGCGCTCCTCCTCCCCTTGG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSVWLSEWLAEPNVHALAAISPQEALMGYLIYDIEKRPA LPVRPAETRAMLHHIAVAAPLRGIGVGKALMTQMKEDALAKGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSD EASQEPSQPTSETSPQEAI
Sequences:
>Translated_179_residues MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSVWLSEWLAEPNVHALAAISPQEALMGYLIYDIEKRPA LPVRPAETRAMLHHIAVAAPLRGIGVGKALMTQMKEDALAKGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSD EASQEPSQPTSETSPQEAI >Mature_179_residues MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSVWLSEWLAEPNVHALAAISPQEALMGYLIYDIEKRPA LPVRPAETRAMLHHIAVAAPLRGIGVGKALMTQMKEDALAKGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSD EASQEPSQPTSETSPQEAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19625; Mature: 19625
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSVWLSEWLAEPNVHALAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE ISPQEALMGYLIYDIEKRPALPVRPAETRAMLHHIAVAAPLRGIGVGKALMTQMKEDALA CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHH KGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSDEASQEPSQPTSETSPQEAI CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSVWLSEWLAEPNVHALAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE ISPQEALMGYLIYDIEKRPALPVRPAETRAMLHHIAVAAPLRGIGVGKALMTQMKEDALA CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHH KGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSDEASQEPSQPTSETSPQEAI CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA